Miyakogusa Predicted Gene

Lj0g3v0209609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0209609.1 tr|Q52KA1|Q52KA1_ARATH At4g39795 OS=Arabidopsis
thaliana GN=At4g39795 PE=2 SV=1,41.84,2e-19,DUF581,Protein of unknown
function DUF581; seg,NULL,CUFF.13444.1
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22160.1 | Symbols:  | Protein of unknown function (DUF581) |...   101   2e-22
AT1G78020.1 | Symbols:  | Protein of unknown function (DUF581) |...   100   4e-22
AT4G39795.1 | Symbols:  | Protein of unknown function (DUF581) |...    76   1e-14
AT5G65040.1 | Symbols:  | Protein of unknown function (DUF581) |...    59   1e-09
AT5G49120.1 | Symbols:  | Protein of unknown function (DUF581) |...    55   2e-08
AT5G47060.1 | Symbols:  | Protein of unknown function (DUF581) |...    54   3e-08
AT2G44670.1 | Symbols:  | Protein of unknown function (DUF581) |...    53   8e-08
AT4G17670.1 | Symbols:  | Protein of unknown function (DUF581) |...    52   1e-07
AT1G74940.1 | Symbols:  | Protein of unknown function (DUF581) |...    52   2e-07
AT1G53903.1 | Symbols:  | Protein of unknown function (DUF581) |...    51   3e-07
AT1G53885.1 | Symbols:  | Protein of unknown function (DUF581) |...    51   3e-07
AT5G20700.1 | Symbols:  | Protein of unknown function (DUF581) |...    49   1e-06

>AT1G22160.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr1:7823238-7823774 FORWARD LENGTH=147
          Length = 147

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 75/146 (51%), Gaps = 5/146 (3%)

Query: 1   MLLGKRPRPPMKRTTSMSEIXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXQTKVLAP 58
           MLLGKR RPP+KRTTS+SEI                                   ++LA 
Sbjct: 1   MLLGKRQRPPIKRTTSLSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAM 60

Query: 59  VPPR-NHRRHSSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDE 117
           V PR   RRHSSD++   DF           V GRDIYMYRGD AFCSLECRQQQ+  DE
Sbjct: 61  VSPRGTQRRHSSDYS--EDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDE 118

Query: 118 RKEKLLVASAKKQVVAAPASSGSQVT 143
           RKEK   +     VVA   ++G +V+
Sbjct: 119 RKEKKKGSVRSTIVVATGTTTGERVS 144


>AT1G78020.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr1:29338787-29339491 FORWARD LENGTH=162
          Length = 162

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 73/149 (48%), Gaps = 13/149 (8%)

Query: 1   MLLGKRPRPPMKRTTSMSEIX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 49
           MLLGKR RPP+ RTTS+SEI                                        
Sbjct: 1   MLLGKRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRG 60

Query: 50  XXQTKVLAPVPPR-NHRRHSSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLEC 108
               ++L+ V PR N RRHS DF+    F           VPGRDIYMYRGD AFCS EC
Sbjct: 61  FLDQRLLSMVTPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSEC 120

Query: 109 RQQQMKQDERKEKLLVAS-AKKQVVAAPA 136
           RQ+QM QDERKEK   A+ AK+  V APA
Sbjct: 121 RQEQMAQDERKEKGKSAAPAKEPAVTAPA 149


>AT4G39795.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr4:18466621-18467325 FORWARD LENGTH=126
          Length = 126

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 17/139 (12%)

Query: 1   MLLGKRPRPPMKRTTSMSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTKVLAPVP 60
           MLLG RPRP M+RT S++ I                                 + L+PV 
Sbjct: 1   MLLGNRPRPQMQRTASITRITIEVDGDQTAGQDSDVSMTVVDGGENYAQ----RFLSPV- 55

Query: 61  PRNHRRHSSDFTGTPD---FXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDE 117
             NH+R+   + G      F            PGRDIYMY+GD+AFCS+ECR+QQM+ DE
Sbjct: 56  --NHQRNERKYGGRSSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDE 113

Query: 118 RKEKLLVASAKKQVVAAPA 136
            K        + +VV +P+
Sbjct: 114 GK-------TRNRVVLSPS 125


>AT5G65040.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr5:25977864-25978350 REVERSE LENGTH=113
          Length = 113

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%)

Query: 76  DFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQV 131
           DF              RDIYMYRG++AFCSLECR++Q+K DE+K K    ++KK +
Sbjct: 56  DFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKTGFVTSKKPI 111


>AT5G49120.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr5:19908800-19909332 REVERSE LENGTH=150
          Length = 150

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 4/57 (7%)

Query: 89  VPGRDIYMYRGDSAFCSLECRQQQMKQDE----RKEKLLVASAKKQVVAAPASSGSQ 141
           +P +DIYMY+GD AFCS+ECR +QM  DE    R+E   +   KK+   +PA++ S+
Sbjct: 80  LPAKDIYMYKGDRAFCSVECRSKQMIMDEEESLRREYCSLMDVKKKKFDSPATAPSR 136


>AT5G47060.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr5:19116843-19117639 FORWARD LENGTH=177
          Length = 177

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 91  GRDIYMYRGDSAFCSLECRQQQMKQDERKEKL--LVASAKKQVVAAPASSGSQVTNTASK 148
            RDIYMYRGD+ FCS ECRQ+Q+++DE KEK   L  S K  +     SS ++  + A  
Sbjct: 111 NRDIYMYRGDTPFCSEECRQEQIERDEAKEKKQNLSHSVKSAMRRKEQSSPTRSRDYAFH 170

Query: 149 GETTVAA 155
             T  AA
Sbjct: 171 NGTVAAA 177


>AT2G44670.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr2:18425279-18425673 FORWARD LENGTH=93
          Length = 93

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 93  DIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQVTNTASKGETT 152
           DI+MYRGD AFCS ECR++Q++ DE KE+    S++     +  +  S   NT   G   
Sbjct: 32  DIFMYRGDKAFCSNECREEQIESDEAKERKWKKSSRSLRKNSSETKESAAGNTVRTGTLV 91

Query: 153 VA 154
           VA
Sbjct: 92  VA 93


>AT4G17670.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr4:9833948-9834663 REVERSE LENGTH=159
          Length = 159

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 61  PRNHRRHSSDFT------GTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMK 114
           PR+ + H   F       G P F              RDI+MYRGD+ FCS ECR++Q++
Sbjct: 54  PRSGKFHDFRFDNSYYGYGQPHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIE 113

Query: 115 QDERKEK 121
           +DE KEK
Sbjct: 114 RDEAKEK 120


>AT1G74940.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr1:28146284-28147065 FORWARD LENGTH=222
          Length = 222

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 91  GRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLV-ASAKKQVVAAPASSGSQVT 143
           G+DIYMY+G+  FCS ECR  Q+  DER+E+     S    V+++P ++G +++
Sbjct: 163 GKDIYMYKGEMGFCSAECRSVQIMNDERQEQCKTQVSRNADVLSSPYAAGQRLS 216


>AT1G53903.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr1:20132363-20132842 FORWARD LENGTH=126
          Length = 126

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 7/60 (11%)

Query: 92  RDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQVTNTASKGET 151
           +D+YMYRGD  FCS ECR+ QM  D+RKE  L AS K  +     +S  +  N A K E+
Sbjct: 57  KDVYMYRGDLGFCSRECRESQMLIDDRKE--LEASTKMML-----ASYRRCNNGAGKSES 109


>AT1G53885.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr1:20119798-20120277 FORWARD LENGTH=126
          Length = 126

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 7/60 (11%)

Query: 92  RDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQVTNTASKGET 151
           +D+YMYRGD  FCS ECR+ QM  D+RKE  L AS K  +     +S  +  N A K E+
Sbjct: 57  KDVYMYRGDLGFCSRECRESQMLIDDRKE--LEASTKMML-----ASYRRCNNGAGKSES 109


>AT5G20700.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr5:7006178-7007003 REVERSE LENGTH=248
          Length = 248

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 6/56 (10%)

Query: 91  GRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQVTNTA 146
           G+DI++YRG+ AFCS ECR   +  DERKE+      + +   +P ++G Q+ +T 
Sbjct: 195 GQDIFIYRGEKAFCSTECRSSHIANDERKER-----CRSKFSTSPYTAG-QIFSTG 244