Miyakogusa Predicted Gene

Lj0g3v0207399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207399.1 Non Chatacterized Hit- tr|I1JKV6|I1JKV6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.34,0,UbiA,UbiA prenyltransferase family; seg,NULL;
BACTERIOCHLOROPHYLL SYNTHASE,NULL; PRENYLTRANSFERASES,,CUFF.13290.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate p...   225   2e-59
AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...    84   6e-17
AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...    84   6e-17

>AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate
           phytyltransferase 1 | chr2:8207491-8210047 FORWARD
           LENGTH=393
          Length = 393

 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/238 (49%), Positives = 160/238 (67%)

Query: 1   MVGIISSTIATSLLTVEKLSDISPLFFTNVLKALVLYLPMCIYIGGVNQLFDVEIDKINK 60
           ++G + S ++ S L VEK+SDISPL FT +L+A+V  L M IYI G+NQL DVEIDK+NK
Sbjct: 109 VIGTVLSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNK 168

Query: 61  PYLPLASGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXXVAYSTVGFVYSANVPLLR 120
           PYLPLASG+ S + G+ IVA   IMSF                    +G  YS N+PLLR
Sbjct: 169 PYLPLASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLR 228

Query: 121 WKGHPVLAAICLVSLTALILPITIFFHFQTYVFKRTTIFWRPLIFVVAFTSVYFVGVSLG 180
           WK   ++AA+C++++ A+I+ I  + H QT+VF R  +F RPLIF  AF S + V ++L 
Sbjct: 229 WKRFALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALF 288

Query: 181 KDIPDMEGDKAFGVNSFAVRFGTKRAFWLSVTLIETAFGIALFTAATSSYLWSKVITV 238
           KDIPD+EGDK FG+ SF+V  G KR FW  VTL++ A+ +A+   ATS ++WSKVI+V
Sbjct: 289 KDIPDIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISV 346


>AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=386
          Length = 386

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)

Query: 10  ATSLLTVEKLSDISPLFFTNVLKALVLYLPMCI---YIGGVNQLFDVEIDKINKPYLPLA 66
           +T+L+T   + +   + ++ VLKAL   L +     YI G+NQ++D+ IDK+NKPYLP+A
Sbjct: 110 STALVTRALIENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIA 169

Query: 67  SGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXXVAYSTVGFVYSANVPLLRWKGHPV 126
           +G LS  +  ++V F  I                       +G +YS  VP LR K  PV
Sbjct: 170 AGDLSVQSAWLLVIFFAIAGLLVVGFNFGPFITSLYSLGLFLGTIYS--VPPLRMKRFPV 227

Query: 127 LAAICLVSLTALILPITIFFHFQTYVFKRTTIFWRPLIFVVAFTSVYFVGVSLGKDIPDM 186
            A + + ++   +L   + +H           +  P+ F+ +F +++ + +++ KD+PD+
Sbjct: 228 AAFLIIATVRGFLLNFGV-YHATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDV 286

Query: 187 EGDKAFGVNSFAVRFGTKRAFWLSVTLI 214
           EGD+ F +++ A + G +   +L   L+
Sbjct: 287 EGDRKFQISTLATKLGVRNIAFLGSGLL 314


>AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=393
          Length = 393

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)

Query: 10  ATSLLTVEKLSDISPLFFTNVLKALVLYLPMCI---YIGGVNQLFDVEIDKINKPYLPLA 66
           +T+L+T   + +   + ++ VLKAL   L +     YI G+NQ++D+ IDK+NKPYLP+A
Sbjct: 117 STALVTRALIENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIA 176

Query: 67  SGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXXVAYSTVGFVYSANVPLLRWKGHPV 126
           +G LS  +  ++V F  I                       +G +YS  VP LR K  PV
Sbjct: 177 AGDLSVQSAWLLVIFFAIAGLLVVGFNFGPFITSLYSLGLFLGTIYS--VPPLRMKRFPV 234

Query: 127 LAAICLVSLTALILPITIFFHFQTYVFKRTTIFWRPLIFVVAFTSVYFVGVSLGKDIPDM 186
            A + + ++   +L   + +H           +  P+ F+ +F +++ + +++ KD+PD+
Sbjct: 235 AAFLIIATVRGFLLNFGV-YHATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDV 293

Query: 187 EGDKAFGVNSFAVRFGTKRAFWLSVTLI 214
           EGD+ F +++ A + G +   +L   L+
Sbjct: 294 EGDRKFQISTLATKLGVRNIAFLGSGLL 321