Miyakogusa Predicted Gene

Lj0g3v0201039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201039.1 Non Chatacterized Hit- tr|I1IB51|I1IB51_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,61.62,6e-17,seg,NULL,CUFF.12766.1
         (99 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63135.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   102   4e-23

>AT5G63135.1 | Symbols:  | unknown protein; Has 30201 Blast hits
          to 17322 proteins in 780 species: Archae - 12; Bacteria
          - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
          Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
          BLink). | chr5:25325253-25326440 REVERSE LENGTH=99
          Length = 99

 Score =  102 bits (255), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 55/64 (85%)

Query: 1  MLQFPAFMTQYPMSTRTIPTSFLLPSQWPQPQNEEFLLAMEESDFEEKCNEIRKMNSNLI 60
          MLQFP  MTQ+P ST+TIP S+LLP QWPQPQNEE LLAMEE++FEEKCNEIRKM+  L 
Sbjct: 1  MLQFPTLMTQFPSSTKTIPASYLLPLQWPQPQNEEILLAMEEAEFEEKCNEIRKMSPALP 60

Query: 61 MIGK 64
          +IGK
Sbjct: 61 VIGK 64