Miyakogusa Predicted Gene

Lj0g3v0192349.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0192349.1 CUFF.12169.1
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36830.1 | Symbols: HOS3-1 | GNS1/SUR4 membrane protein famil...   194   4e-50
AT1G75000.1 | Symbols:  | GNS1/SUR4 membrane protein family | ch...   192   3e-49
AT3G06470.1 | Symbols:  | GNS1/SUR4 membrane protein family | ch...    76   2e-14
AT3G06460.1 | Symbols:  | GNS1/SUR4 membrane protein family | ch...    73   2e-13

>AT4G36830.1 | Symbols: HOS3-1 | GNS1/SUR4 membrane protein family |
           chr4:17349511-17350380 FORWARD LENGTH=289
          Length = 289

 Score =  194 bits (494), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 93/146 (63%), Positives = 114/146 (78%), Gaps = 2/146 (1%)

Query: 82  APLQTPFEWLLCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCIXXXXXXSFSQLFNHS 141
           +   TP +WLLCFPLGTRPSGRVFFWSY++YL+RFLHM RT+F +      + SQLF +S
Sbjct: 107 SKTATPLQWLLCFPLGTRPSGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNS 166

Query: 142 ISTFVSFLWLEYSQSFQVLAILFTTLVYALVYGYRFGTAIGFRGACFP-FVLNCQIVLLG 200
           +  F SFLWLE+SQS+Q+LAIL TTLVY++VYGYRF T  G  G+ FP FV+NCQ+VL+G
Sbjct: 167 VMAFTSFLWLEFSQSYQILAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVG 226

Query: 201 CNVACHVGVFLLHFFFKGGCNGIGAW 226
           CN+  H GV  +H  FKGGCNGIGAW
Sbjct: 227 CNLVSHAGVLTMH-LFKGGCNGIGAW 251


>AT1G75000.1 | Symbols:  | GNS1/SUR4 membrane protein family |
           chr1:28163650-28164586 FORWARD LENGTH=281
          Length = 281

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/141 (65%), Positives = 105/141 (74%)

Query: 86  TPFEWLLCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCIXXXXXXSFSQLFNHSISTF 145
           T  +W LCFP+GTR SGRVFFWSY +YLSRFLH+ RT F +      SF QL N S    
Sbjct: 108 TALQWFLCFPVGTRASGRVFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLC 167

Query: 146 VSFLWLEYSQSFQVLAILFTTLVYALVYGYRFGTAIGFRGACFPFVLNCQIVLLGCNVAC 205
           +SFLWLEYSQSFQV+AIL TT+ YA+VYGYRF T IG RGACFPFV NCQ +LLGC   C
Sbjct: 168 ISFLWLEYSQSFQVVAILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVC 227

Query: 206 HVGVFLLHFFFKGGCNGIGAW 226
           HVGV  +H   +GGCNGIGAW
Sbjct: 228 HVGVLCIHLVKRGGCNGIGAW 248


>AT3G06470.1 | Symbols:  | GNS1/SUR4 membrane protein family |
           chr3:1984206-1985042 FORWARD LENGTH=278
          Length = 278

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 3/137 (2%)

Query: 92  LCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCI--XXXXXXSFSQLFNHSISTFVSFL 149
           +CFP+  +P+G +FFW+ ++YLS+ L    T+  I        SF  +++H+    + +L
Sbjct: 108 ICFPVDVKPNGPLFFWAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYL 167

Query: 150 WLEYSQSFQVLAILFTTLVYALVYGYRFGTAIGFRGACFPFVLNCQIVLLGCNVACHVGV 209
           WL   QS   +A++  + V+ ++YGY F  A+G R      V +CQIV    +     G 
Sbjct: 168 WLRTRQSMFPIALVTNSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLS-GW 226

Query: 210 FLLHFFFKGGCNGIGAW 226
            L    F  GC GI  W
Sbjct: 227 MLREHLFGSGCTGIWGW 243


>AT3G06460.1 | Symbols:  | GNS1/SUR4 membrane protein family |
           chr3:1982681-1983577 FORWARD LENGTH=298
          Length = 298

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 92  LCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCIXXXXXX--SFSQLFNHSISTFVSFL 149
           +CFPL  +P G +FFW+ ++YLS+ L    T+  I        SF  +++H+    + +L
Sbjct: 105 VCFPLDVKPKGPLFFWAQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYL 164

Query: 150 WLEYSQSFQVLAILFTTLVYALVYGYRFGTAIGFRGACFPFVLNCQIVLLGCNVACHVGV 209
           WL   QS   + ++  + V+ ++YGY F  AIG R      V N Q+V     +      
Sbjct: 165 WLRTRQSMFPVGLVLNSTVHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAW 224

Query: 210 FLLHFFFKGGCNGI 223
            L   +F  GC GI
Sbjct: 225 MLPEHYFGSGCAGI 238