Miyakogusa Predicted Gene

Lj0g3v0152499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0152499.1 Non Chatacterized Hit- tr|I1JG10|I1JG10_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12715
PE,71.93,0.0000000000001, ,CUFF.9411.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42080.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    72   1e-13
AT3G58020.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    52   9e-08

>AT2G42080.1 | Symbols:  | Chaperone DnaJ-domain superfamily
          protein | chr2:17553409-17555475 REVERSE LENGTH=263
          Length = 263

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)

Query: 1  MNSAVKSTLFNSNPNNRFILTFRLFHSTPLLERKRRNSWESRCNNYSKRFRRTRAKQTLL 60
          MN+A+++ +      +  + T   FHSTP+LERKRR SWES+ N + KRFRR R KQ LL
Sbjct: 1  MNAAIRAAILRPQSYSSQLKT-AFFHSTPVLERKRRTSWESKANVHKKRFRRMREKQELL 59

Query: 61 RNVNSYAEFMF 71
          RNVN++A  MF
Sbjct: 60 RNVNAFAANMF 70


>AT3G58020.1 | Symbols:  | Chaperone DnaJ-domain superfamily
          protein | chr3:21479501-21480981 FORWARD LENGTH=254
          Length = 254

 Score = 51.6 bits (122), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 7/74 (9%)

Query: 1  MNSAVKSTLFNSNPNNRFI-LTFRLFHSTPLLERKRRNSWESRCNNYSKRFRRTRAKQTL 59
          M +A+++ +    P + +  L   LFHSTP+L+RK +++ ++R    SKRF R +AKQ L
Sbjct: 1  MMAAIRAAILK--PQDYYSHLKTALFHSTPILQRKHQSNSKAR----SKRFGRKKAKQDL 54

Query: 60 LRNVNSYAEFMFQV 73
           RNVN++A+ +F +
Sbjct: 55 RRNVNAFAQHLFGI 68