Miyakogusa Predicted Gene
- Lj0g3v0150479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0150479.1 tr|C7IZM4|C7IZM4_ORYSJ Os03g0632800 protein
OS=Oryza sativa subsp. japonica GN=Os03g0632800 PE=4
SV=,65.71,6e-18,no description,Zinc finger, RING/FYVE/PHD-type;
seg,NULL; RING FINGER PROTEIN,NULL; RING/U-box,NULL;,CUFF.9242.1
(427 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 | ch... 318 3e-87
AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch... 285 5e-77
AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch... 144 8e-35
AT3G23060.1 | Symbols: | RING/U-box superfamily protein | chr3:... 105 8e-23
AT5G13250.1 | Symbols: | RING finger protein | chr5:4234486-424... 82 6e-16
AT1G28080.1 | Symbols: | RING finger protein | chr1:9789826-979... 61 1e-09
AT1G03770.2 | Symbols: RING1B | RING 1B | chr1:944772-947431 FOR... 50 4e-06
AT1G03770.1 | Symbols: ATRING1B, RING1B | RING 1B | chr1:944772-... 50 4e-06
AT1G03770.3 | Symbols: RING1B | RING 1B | chr1:944772-947431 FOR... 50 4e-06
>AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 |
chr2:13026444-13030363 FORWARD LENGTH=420
Length = 420
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/431 (44%), Positives = 254/431 (58%), Gaps = 51/431 (11%)
Query: 16 ERQTLEACMKCPLCYKIFREATTISLCLHTFCRKCIYEKLSDEEMDCCPVCNIDLGCMAV 75
+R+T+ ACM CPLC K+ R+ATTIS CLHTFCRKCIYEK++++E++ CPVC+IDLG +
Sbjct: 10 KRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPL 69
Query: 76 EKLRPDHNLQDMRAKLFPFKQKKIRPQEVVPSVSPPAKRKERSLSSLVVSAPKVSTNXXX 135
EKLRPDH LQD+RAKLFP K+KK R EVV S+S PAKRKERS+SSLVVS P+VS
Sbjct: 70 EKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPRVSAQ--A 127
Query: 136 XXXXXXXXXXXXXXLRGCNFNLEESIKTEGKHGEHNLVPSTAEP------------SKKH 183
+RG + ++K E + G+ + V S + P S
Sbjct: 128 GTTGKRTKAATRKDVRGSGSFTKRTVKKEEEFGDDH-VESASSPETLKKFTQNKRQSSYA 186
Query: 184 RPNEDTKN--SMDLTE---EKVDLWTPLHCLLEVANRTKFSKSNSQGTPHAKLEGNLATP 238
PN+ N + D+ E K+ LW PL+ L++VAN TK KS H ++G+
Sbjct: 187 NPNQSLSNRRNKDVDEPWDSKLHLWKPLNFLVDVANGTKDPKSELGNASHNDVQGS---- 242
Query: 239 QGGQXXXXXXXXXXXLASVQSAKTKDNGHKAKL-------GDDKDGKTFPSGPRKRRRVR 291
KTKD+ K KL GD +T +R R +
Sbjct: 243 --------------------KTKTKDHKRKCKLEEEISNNGDPTTSETATLKRTRRTRRK 282
Query: 292 PDSQKKKAASKIMLDATESRCNGENSAIWFSLVASEDQKGEFPLPQISACYLRIKDGNVP 351
S + ++ A + N +WFSLVAS +Q+GE LPQI A YLRI+DGN+P
Sbjct: 283 RSSTFGDSRIPLLPGAASLKQERRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIP 342
Query: 352 VSFIHKYLAKKLNLASEAEVVITCRGQSLLPSLKLHNIVDLWLCTTPSSKKIRASVGSSA 411
VSFI KYL +KL+L SE EV ITC G+ ++P+L+LH++VDLWL TT +++ AS+GSSA
Sbjct: 343 VSFIQKYLMRKLDLKSEDEVEITCMGEPVIPTLQLHSLVDLWLETTSKHQRVAASIGSSA 402
Query: 412 KEFVMVLSYSR 422
KEFVMVL YSR
Sbjct: 403 KEFVMVLVYSR 413
>AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
chr1:2079222-2081707 REVERSE LENGTH=421
Length = 421
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 247/431 (57%), Gaps = 46/431 (10%)
Query: 16 ERQTLEACMKCPLCYKIFREATTISLCLHTFCRKCIYEKLSDEEMDCCPVCNIDLGCMAV 75
+++T+ AC+ C +C I R+ATTIS CLHTFCRKCIYEK++++E++ CPVCNIDLG +
Sbjct: 6 KKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTPL 65
Query: 76 EKLRPDHNLQDMRAKLFPFKQKKIRPQEVVPSVSPPAKRKERSLSSLVVSAPKVSTNXXX 135
EKLRPDHNLQD+RAK+F K++K++ + VS P KRKERS+SSLVVS P VS
Sbjct: 66 EKLRPDHNLQDLRAKIFALKRRKVKAPGI---VSLPGKRKERSISSLVVSTPMVSAQ--A 120
Query: 136 XXXXXXXXXXXXXXLRGCNFNLEESIKTEGKHGEHNLVPSTAEPS--------------- 180
LR + E ++K E G+ L+ ST+ P
Sbjct: 121 GTTRRRTKAPTRKELRNGSL-AERTVKKEESSGDE-LLESTSSPDTLNKFTQNKRQSKKS 178
Query: 181 -KKHRPNEDTKNSMDLTEEKVDLWTPLHCLLEVANRTK-FSKSNSQGTPHAKLEGNLATP 238
K+ N++ K+ + + K+D W PL+ L+EVAN TK S SQG+ N++
Sbjct: 179 CKESISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGSKSEHANVSRN 237
Query: 239 QGGQXXXXXXXXXXXLASVQSAKTKDNGHKAKLGDDKDGKTFPSGPRKRRRVRPDSQKKK 298
Q + K K K+ GD +T P++ R +Q+K+
Sbjct: 238 Q--------FQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVT--PKRMR----TTQRKR 283
Query: 299 AASKI-------MLDATESRCNGENSAIWFSLVASEDQKGEFPLPQISACYLRIKDGNVP 351
+A+ + D + ++ N +WFSLVAS DQ+G LPQI A +LRI+DGN
Sbjct: 284 SATTLGDSRNLPQPDESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTT 343
Query: 352 VSFIHKYLAKKLNLASEAEVVITCRGQSLLPSLKLHNIVDLWLCTTPSSKKIRASVGSSA 411
VSFI KYL +KL+L SE E+ I C G++++P+L L+N+VDLWL + + ++ A VGSSA
Sbjct: 344 VSFIQKYLMRKLDLESENEIEIKCMGEAVIPTLTLYNLVDLWLQKSSNHQRFAALVGSSA 403
Query: 412 KEFVMVLSYSR 422
K+F MVL Y+R
Sbjct: 404 KDFTMVLVYAR 414
>AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
chr1:2079222-2080658 REVERSE LENGTH=307
Length = 307
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 40/289 (13%)
Query: 158 EESIKTEGKHGEHNLVPSTAEPS----------------KKHRPNEDTKNSMDLTEEKVD 201
E ++K E G+ L+ ST+ P K+ N++ K+ + + K+D
Sbjct: 28 ERTVKKEESSGDE-LLESTSSPDTLNKFTQNKRQSKKSCKESISNKENKDGDEPWDSKMD 86
Query: 202 LWTPLHCLLEVANRTK-FSKSNSQGTPHAKLEGNLATPQGGQXXXXXXXXXXXLASVQSA 260
W PL+ L+EVAN TK S SQG+ N++ Q +
Sbjct: 87 -WKPLNFLVEVANGTKPLKSSASQGSGSKSEHANVSRNQ--------FQGSKTKTKNKKR 137
Query: 261 KTKDNGHKAKLGDDKDGKTFPSGPRKRRRVRPDSQKKKAASKI-------MLDATESRCN 313
K K K+ GD +T P++ R +Q+K++A+ + D + ++
Sbjct: 138 KCKREDDKSNNGDPTTSETVT--PKRMR----TTQRKRSATTLGDSRNLPQPDESSAKQE 191
Query: 314 GENSAIWFSLVASEDQKGEFPLPQISACYLRIKDGNVPVSFIHKYLAKKLNLASEAEVVI 373
N +WFSLVAS DQ+G LPQI A +LRI+DGN VSFI KYL +KL+L SE E+ I
Sbjct: 192 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEI 251
Query: 374 TCRGQSLLPSLKLHNIVDLWLCTTPSSKKIRASVGSSAKEFVMVLSYSR 422
C G++++P+L L+N+VDLWL + + ++ A VGSSAK+F MVL Y+R
Sbjct: 252 KCMGEAVIPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFTMVLVYAR 300
>AT3G23060.1 | Symbols: | RING/U-box superfamily protein |
chr3:8200868-8203116 FORWARD LENGTH=480
Length = 480
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 278 KTFPSGPR-KRRRVRPDSQKKKAASKIMLDATESRCNGENS-AIWFSLVASEDQKGEFPL 335
K++ PR RR V P + + + ++ G N+ +WFSL S+ Q E L
Sbjct: 322 KSYSLRPRIGRRTVNPAAGTTTPEAPVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLL 381
Query: 336 PQISACYLRIKDGNVPVSFIHKYLAKKLNLASEAEVVITCRGQSLLPSLKLHNIVDLWLC 395
P I+AC +R+KD N+ VS++ KYL KL L SE +V I R + + SL LHN+VD W+
Sbjct: 382 PPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVDWWVQ 441
Query: 396 TTPSSKKIRASVGSSAKEFVMVLSYS 421
TTP ++ A VGSSA EF+M L YS
Sbjct: 442 TTPLPERQSAMVGSSAAEFIMDLYYS 467
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 20 LEACMKCPLCYKIFREATTISLCLHTFCRKCIYEKLSDEEMDCCPVCNIDLGCMAVEKLR 79
++ C+ CP+C F++ATTIS CLHTFCR CI K +E ++ CPVCN++LG +EKLR
Sbjct: 10 VKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLR 69
Query: 80 PDHNLQDMRAKLF 92
D QD++ K++
Sbjct: 70 SDCTWQDLKLKIY 82
>AT5G13250.1 | Symbols: | RING finger protein |
chr5:4234486-4241615 FORWARD LENGTH=387
Length = 387
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 316 NSAIWFSLVASEDQKGEFPLPQISACYLRIKDGNVPVSFIHKYLAKKLNLASEAEVV-IT 374
+S IWF L AS++Q E LPQI YLRIKDG + V + KYL KL L E++ V I
Sbjct: 273 HSGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIR 332
Query: 375 CRGQSLLPSLKLHNIVD-LWLC---TTPSSKKIRASVGSSAKEFVMVLSYSR 422
CRGQ L P L L ++ D +W T+ S+ I SS + +MVL Y R
Sbjct: 333 CRGQELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHYGR 384
>AT1G28080.1 | Symbols: | RING finger protein |
chr1:9789826-9790918 FORWARD LENGTH=291
Length = 291
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 316 NSAIWFSLVASEDQKGEFPLPQISACYLRIKDGNVPVSFIHKYLAKKLNLASEAEVVI 373
+S +WF L AS+ Q+ E LPQ++ YLRIKDG + V + KYL KKL L SE+EV I
Sbjct: 234 HSGLWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEVNI 291
>AT1G03770.2 | Symbols: RING1B | RING 1B | chr1:944772-947431
FORWARD LENGTH=468
Length = 468
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 24 MKCPLCYKIFREATTISLCLHTFCRKCIYE--KLSDEEMDCCPVCNIDLGCMAVEKLRPD 81
++C +C I R+ T+ CLH FCR+CI + +L + E CP C C + LR D
Sbjct: 103 VQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNE---CPTCR--KHCASRRSLRDD 157
Query: 82 HNLQDMRAKLFP-----------FKQ-KKIRPQEVVPSVSPPAKRKERSL 119
N + A LF F+Q + R +++ S++ ++R+ ++L
Sbjct: 158 PNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKAL 207
>AT1G03770.1 | Symbols: ATRING1B, RING1B | RING 1B |
chr1:944772-947431 FORWARD LENGTH=460
Length = 460
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 24 MKCPLCYKIFREATTISLCLHTFCRKCIYE--KLSDEEMDCCPVCNIDLGCMAVEKLRPD 81
++C +C I R+ T+ CLH FCR+CI + +L + E CP C C + LR D
Sbjct: 101 VQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNE---CPTCR--KHCASRRSLRDD 155
Query: 82 HNLQDMRAKLFP-----------FKQ-KKIRPQEVVPSVSPPAKRKERSL 119
N + A LF F+Q + R +++ S++ ++R+ ++L
Sbjct: 156 PNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKAL 205
>AT1G03770.3 | Symbols: RING1B | RING 1B | chr1:944772-947431
FORWARD LENGTH=466
Length = 466
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 24 MKCPLCYKIFREATTISLCLHTFCRKCIYE--KLSDEEMDCCPVCNIDLGCMAVEKLRPD 81
++C +C I R+ T+ CLH FCR+CI + +L + E CP C C + LR D
Sbjct: 101 VQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNE---CPTCR--KHCASRRSLRDD 155
Query: 82 HNLQDMRAKLFP-----------FKQ-KKIRPQEVVPSVSPPAKRKERSL 119
N + A LF F+Q + R +++ S++ ++R+ ++L
Sbjct: 156 PNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKAL 205