Miyakogusa Predicted Gene

Lj0g3v0146209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146209.1 tr|H6S0L9|H6S0L9_LOTJA CCD7-like protein OS=Lotus
japonicus GN=CCD7 PE=2 SV=1,99.49,0,seg,NULL; SUBFAMILY NOT
NAMED,NULL; BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carotenoid,CUFF.8912.1
         (599 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44990.1 | Symbols: CCD7, MAX3, ATCCD7 | carotenoid cleavage ...   715   0.0  

>AT2G44990.1 | Symbols: CCD7, MAX3, ATCCD7 | carotenoid cleavage
           dioxygenase 7 | chr2:18558938-18561621 FORWARD
           LENGTH=629
          Length = 629

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/539 (62%), Positives = 431/539 (79%), Gaps = 14/539 (2%)

Query: 74  LDDSIVAPW-DYQFLFMSQRSETTQPITLRVVDGAVPADFPTGTYYLTGPGILSDDHGST 132
           LD+S  + + DYQ LF+SQRSET +P+ ++ ++G++P +FP+GTYYL GPG+ +DDHGST
Sbjct: 50  LDESTSSAFRDYQSLFVSQRSETIEPVVIKPIEGSIPVNFPSGTYYLAGPGLFTDDHGST 109

Query: 133 VHPLDGHGYLRAFTFDNNVTNKVKYMAKYIRTEAQLEEHDPKTNTWKFTHRGPFSVLKGG 192
           VHPLDGHGYLRAF  D N   K  + AKY++TEA+ EEHDP T+TW+FTHRGPFSVLKGG
Sbjct: 110 VHPLDGHGYLRAFHIDGN-KRKATFTAKYVKTEAKKEEHDPVTDTWRFTHRGPFSVLKGG 168

Query: 193 KKVGNTKVMKNVANTSVLKWGEKLLCMWEGGEPYEMESGTLDTIGRYNMMDD-CDLDDHE 251
           K+ GNTKVMKNVANTSVLKW  +LLC+WEGGEPYE+ESG+LDT+GR+N+ ++ C+  D +
Sbjct: 169 KRFGNTKVMKNVANTSVLKWAGRLLCLWEGGEPYEIESGSLDTVGRFNVENNGCESCDDD 228

Query: 252 NPG-----DHDVWDVAASLLKPILYGVFKMPPRRLLSHYKIDSVRSRLLTVSCNAEDMLL 306
           +        HD+WD AA LLKPIL GVFKMPP+R LSHYK+D  R RLLTV+CNAEDMLL
Sbjct: 229 DSSDRDLSGHDIWDTAADLLKPILQGVFKMPPKRFLSHYKVDGRRKRLLTVTCNAEDMLL 288

Query: 307 PRSHFTFSEYDSNFQLVQKQKFKIPDHLMIHDWAFTDTHYIVFANRIKLDIPGSMAAVYG 366
           PRS+FTF EYDS F+L+Q ++FKI DH+MIHDWAFTDTHYI+FANR+KL+  GS+AA+ G
Sbjct: 289 PRSNFTFCEYDSEFKLIQTKEFKIDDHMMIHDWAFTDTHYILFANRVKLNPIGSIAAMCG 348

Query: 367 TSPMIAALKVNPSKSTSPIYLLPRFPENSKCKERDWRVPVEVPSQLWLIHVGNAFQVTHA 426
            SPM++AL +NPS  +SPIY+LPRF +      RDWRVPVEV SQLWLIH GNA++    
Sbjct: 349 MSPMVSALSLNPSNESSPIYILPRFSDKYSRGGRDWRVPVEVSSQLWLIHSGNAYETRED 408

Query: 427 HGNLDIQIQATACSYQWFNFRKLFGYNWQKQNLDPSIMNI-EGDSELLPHLVQVSIRLDS 485
           +G+L IQIQA+ACSY+WF+F+K+FGY+WQ   LDPS+MN+  GD +LLPHLV+VS+ LDS
Sbjct: 409 NGDLKIQIQASACSYRWFDFQKMFGYDWQSNKLDPSVMNLNRGDDKLLPHLVKVSMTLDS 468

Query: 486 DYNCQECDVKPMQKWKKSSDFPITNPAFSGKENRYLYAATTLGSRKSLPSFPFDTVVKLD 545
             NC  CDV+P+  W K SDFP+ N ++SGK+N+Y+Y+A + G+R  LP FPFD VVK D
Sbjct: 469 TGNCNSCDVEPLNGWNKPSDFPVINSSWSGKKNKYMYSAASSGTRSELPHFPFDMVVKFD 528

Query: 546 LVSDSVQTWTVDSRKFIGEPIFVPKGD-----QEDDGYLLVVEYAVSKPRCYLVILNPR 599
           L S+ V+TW+  +R+F+GEP+FVPK       +EDDGY++VVEYAVS  RCYLVIL+ +
Sbjct: 529 LDSNLVRTWSTGARRFVGEPMFVPKNSVEEGEEEDDGYIVVVEYAVSVERCYLVILDAK 587