Miyakogusa Predicted Gene

Lj0g3v0135879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0135879.1 Non Chatacterized Hit- tr|Q9SK70|Q9SK70_ARATH
Putative uncharacterized protein At2g20320
OS=Arabidop,51.58,3e-19,seg,NULL,17814_g.1
         (109 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein...    96   6e-21

>AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr2:8767082-8772271 FORWARD LENGTH=1029
          Length = 1029

 Score = 95.5 bits (236), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/95 (50%), Positives = 61/95 (64%), Gaps = 9/95 (9%)

Query: 11  AFRVAGEAWQNMYXXXXXXXXXXXXXMPQMGPGAHRRCQSELVTKGFQRSSSFQKLKCHV 70
           A +VAGE +QN+Y             +PQ     HRR QSE+ T G +R++SFQ+LK  +
Sbjct: 243 AVKVAGETYQNVYFNGPV--------LPQSPTQGHRRTQSEIGTPGHRRTNSFQRLKTQM 294

Query: 71  QKAWRWSGRSRDENSLPNFNPEVMANQKRQWYQLH 105
           QKAWR     R++N  P FNPEV+ANQKRQWYQLH
Sbjct: 295 QKAWRGVSNLREDNR-PTFNPEVLANQKRQWYQLH 328