Miyakogusa Predicted Gene
- Lj0g3v0133179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0133179.1 Non Chatacterized Hit- tr|C5X9N0|C5X9N0_SORBI
Putative uncharacterized protein Sb02g003340
OS=Sorghu,33.74,4e-19,RING/U-box,NULL; ZF_RING_2,Zinc finger,
RING-type; Ring finger,Zinc finger, RING-type;
zf-RING_2,Zin,CUFF.8128.1
(180 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 187 5e-48
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 173 5e-44
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 110 4e-25
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 100 5e-22
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 92 2e-19
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 85 3e-17
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 84 4e-17
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 83 9e-17
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 82 2e-16
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 82 3e-16
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 80 1e-15
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 1e-15
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 79 1e-15
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 78 3e-15
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 78 4e-15
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 78 4e-15
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 78 4e-15
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 77 6e-15
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 77 9e-15
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 1e-14
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 75 2e-14
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 75 2e-14
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 75 2e-14
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 75 3e-14
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 4e-14
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 4e-14
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 74 4e-14
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 5e-14
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 74 5e-14
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 73 1e-13
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 73 1e-13
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 73 1e-13
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 2e-13
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 72 2e-13
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 2e-13
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 72 2e-13
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 72 2e-13
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 72 2e-13
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 71 4e-13
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 5e-13
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 6e-13
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 7e-13
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 1e-12
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 1e-12
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 1e-12
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 69 2e-12
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 2e-12
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 69 2e-12
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 2e-12
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 68 3e-12
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 68 3e-12
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 67 5e-12
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 6e-12
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 67 7e-12
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 66 1e-11
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 65 3e-11
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 3e-11
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 4e-11
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 64 5e-11
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 6e-11
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 64 6e-11
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 7e-11
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 63 8e-11
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 62 2e-10
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 2e-10
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 62 2e-10
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 62 3e-10
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 61 3e-10
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 61 4e-10
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 61 4e-10
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 61 4e-10
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 61 4e-10
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 61 5e-10
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 5e-10
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 8e-10
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 60 9e-10
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 9e-10
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 1e-09
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 1e-09
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 2e-09
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 2e-09
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 59 2e-09
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 3e-09
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 3e-09
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 4e-09
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 4e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 57 5e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 5e-09
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 5e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 6e-09
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 6e-09
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 9e-09
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 9e-09
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 1e-08
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 1e-08
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 1e-08
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 56 1e-08
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 1e-08
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 1e-08
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 55 2e-08
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 3e-08
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 4e-08
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 54 5e-08
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 54 5e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 6e-08
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 7e-08
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 8e-08
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 1e-07
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 1e-07
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 1e-07
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 53 1e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-07
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 2e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 2e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 3e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 52 3e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 52 3e-07
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 4e-07
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 5e-07
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 51 5e-07
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 6e-07
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 6e-07
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 7e-07
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 50 1e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 1e-06
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 1e-06
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-06
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 1e-06
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 2e-06
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 49 2e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 49 2e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 2e-06
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 49 3e-06
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 48 4e-06
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 48 5e-06
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 48 5e-06
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT3G51325.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 5e-06
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 47 5e-06
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 7e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 7e-06
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 7e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 47 8e-06
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 9e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 9e-06
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 187 bits (474), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 114/179 (63%), Gaps = 26/179 (14%)
Query: 23 LTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRALRHNRRRAP---------DGVVLPRII 73
LT LGFGYSIAIA CCR +RRR V+LPRII
Sbjct: 30 LTTLGFGYSIAIALGFLVLLSTVLLSSYICCR---DSRRRTTAVESTGDRGGSVILPRII 86
Query: 74 FVAEEGAE--EEGPRVSGLDPNVINSYPRFQYAAAERGHG--------ETTCSICLCEFK 123
FVAEE E E G V GLD VINSYP+F ++ +TTCSICLCE+K
Sbjct: 87 FVAEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYK 146
Query: 124 EAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMP----TPLSTPLQEVVPLSQY 178
EAEMLRMMPEC+H+FHLCCLD+WLKLNGSCPVCRNSP+P TPLSTPL EVVPLSQY
Sbjct: 147 EAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLSQY 205
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 173 bits (439), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 114/184 (61%), Gaps = 27/184 (14%)
Query: 23 LTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRALR-----------HNRRRAPDGVVLPR 71
+T+LG GYSIAIA CCRA R N + GV++PR
Sbjct: 21 ITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPR 80
Query: 72 IIFVAEEGAEEEGPRV-SGLDPNVINSYPRFQYA----AAERGHG-------ETTCSICL 119
IIFVAE+ E G V GLD +VINSYP+F + A G G ETTCSICL
Sbjct: 81 IIFVAEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICL 140
Query: 120 CEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMP----TPLSTPLQEVVPL 175
CE+ E EMLRMMPEC+H+FH+ CLD+WLKLNGSCPVCRNSP+P TP STPL EVVPL
Sbjct: 141 CEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPL 200
Query: 176 SQYA 179
SQYA
Sbjct: 201 SQYA 204
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 65/88 (73%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GLD + I SYP+ Y+ A+ + C+ICL ++K +LR +P+C H FHL C+D+WL+
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 149 LNGSCPVCRNSPMPTPLSTPLQEVVPLS 176
LN +CPVCR SP+PTPLSTPL EVVPL+
Sbjct: 181 LNPTCPVCRTSPLPTPLSTPLAEVVPLA 208
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 24 TNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRALRHNRRRAPDGVVLPRIIFVAEEGAEEE 83
+ +G GY IAIA C R+ R A VVL + AE +
Sbjct: 9 SGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLD----LPSPAAEVK 64
Query: 84 GPRVSGLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLC 141
GLD VI SYPR + R CSICLC+++ E +R +PEC H FH
Sbjct: 65 ----LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTD 120
Query: 142 CLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSQYAR 180
C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+ R
Sbjct: 121 CVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR 159
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 87 VSGLDPNVINSYPRFQYAAAE-----RGHGETT--CSICLCEFKEAEMLRMMPECRHHFH 139
V GL VI +P+ Y A + TT CSICL ++K+ +M+R++P+C H FH
Sbjct: 94 VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFH 153
Query: 140 LCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSQ 177
C+D WL+L+ +CPVCR SP+P+P TP+ +VVP S+
Sbjct: 154 DNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 78 EGAEEEGPRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHH 137
+G R SGLD I S P F+++A + CS+CL +F++ E+LR++P+CRH
Sbjct: 87 QGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHA 146
Query: 138 FHLCCLDSWLKLNGSCPVCRN 158
FH+ C+D WL+ + +CP+CRN
Sbjct: 147 FHIGCIDQWLEQHATCPLCRN 167
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 87 VSGLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
V GLD I SYP+ ++R + TC+ICL E++ E LR +P+C+H FH C+D
Sbjct: 300 VMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCID 359
Query: 145 SWLKLNGSCPVCRNSP 160
WLKLNG+CPVCRNSP
Sbjct: 360 EWLKLNGTCPVCRNSP 375
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 85 PRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
R SGLD I S P F+++A + CS+CL +F+ E+LR++P+CRH FH+ C+D
Sbjct: 93 DRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCID 152
Query: 145 SWLKLNGSCPVCRN 158
WL+ + +CP+CR+
Sbjct: 153 QWLEQHATCPLCRD 166
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 85 PRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
P +GLDP +I S+P F Y++A + + T C+ICL EF + + +R++ CRH FH C+D
Sbjct: 73 PENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCID 132
Query: 145 SWLKLNGSCPVCR 157
W +L+ +CPVCR
Sbjct: 133 LWFELHKTCPVCR 145
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GL +VINS+P F Y+ + G G C+ICL EF++ E LR+MP C H FH C+D
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 146 WLKLNGSCPVCRNSPMPTPLS 166
WL +CPVCR S P P S
Sbjct: 159 WLSSRSTCPVCRASLPPKPGS 179
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYA---AAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
G+D +VI S+P F Y+ A + G+G C+ICLCEF++ E LR MP C H FH C+D
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 146 WLKLNGSCPVCR 157
WL +CPVCR
Sbjct: 151 WLSSRSTCPVCR 162
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 86 RVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
R GL+P VI+S QY+ + T CS+CL EF+E E LR++P+C+H FHL C+D+
Sbjct: 188 RTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDT 247
Query: 146 WLKLNGSCPVCR 157
WL+ + +CP+CR
Sbjct: 248 WLRSHTNCPLCR 259
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 87 VSGLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCL 143
+GLD ++I SY + + + R + + C ICL E+ E +R +PEC H FH C+
Sbjct: 289 TTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECI 348
Query: 144 DSWLKLNGSCPVCRNSPMP 162
D WLK++GSCP+CRNSP P
Sbjct: 349 DVWLKIHGSCPLCRNSPSP 367
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD +V+ ++P F Y+ + G GE C+ICL EF++ E LR++P+C H FH C+D+
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158
Query: 146 WLKLNGSCPVCR 157
WL+ + +CPVCR
Sbjct: 159 WLEAHVTCPVCR 170
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD + I SY + + + R G + C ICL E+ E +R +PEC H FH C+D+
Sbjct: 298 GLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDA 357
Query: 146 WLKLNGSCPVCRNSPMP 162
WLKL+ SCPVCR++P P
Sbjct: 358 WLKLHSSCPVCRSNPSP 374
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD ++I ++P FQY+ + G CS+CL EF++ E LR++P+C H FH C+D+
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 146 WLKLNGSCPVCRNSPMPTPLSTPLQEVVP 174
WL+ + +CP+CR +P P + + +P
Sbjct: 175 WLRSHTTCPLCRADLIPVPGESIVSIQIP 203
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 87 VSGLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCL 143
V GLD +INS+P F Y+ + G G C++C+CEF++ E LR+MPEC H FH C+
Sbjct: 65 VRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCV 124
Query: 144 DSWLKLNGSCPVCR 157
WL + +CP+CR
Sbjct: 125 SVWLSDHSTCPLCR 138
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 87 VSGLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
+GLD + I SY + + + R G C ICL E+ E +R MPEC H FH+ C+D
Sbjct: 223 TTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCID 282
Query: 145 SWLKLNGSCPVCRNS 159
WLK++ SCPVCRNS
Sbjct: 283 EWLKIHSSCPVCRNS 297
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 89 GLDPNVINSYPRFQYAAA---ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD I S+P F Y A E G GE C +CL EFK+ E LR++P C H FH C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 146 WLKLNGSCPVCRNSPMP 162
WL + +CP+CR +P
Sbjct: 116 WLSHSSTCPICRAKVVP 132
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 88 SGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
SGLD +I++ P F Y + C++CLCEF E + LR++P C H FH+ C+D+WL
Sbjct: 117 SGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWL 176
Query: 148 KLNGSCPVCR 157
N +CP+CR
Sbjct: 177 LSNSTCPLCR 186
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYA---AAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD I ++P F Y+ A G G C++CLCEF++ E LR+MP C H FH C+D
Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDV 165
Query: 146 WLKLNGSCPVCR 157
WL + +CP+CR
Sbjct: 166 WLSEHSTCPLCR 177
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GLDPNVI S P F ++ E C++CL EF+E+E R++P C+H FH+ C+D W
Sbjct: 94 GLDPNVIKSLPVFTFSD-ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 149 LNGSCPVCRN 158
+ +CP+CR+
Sbjct: 153 SHSTCPLCRS 162
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL+ ++I S ++Y + + + CS+CL EF+E E LR++P+C H FHL C+D+WLK
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
Query: 149 LNGSCPVCRNSPMPTPLSTPLQEV 172
+ +CP+CR T ++ P V
Sbjct: 176 SHSNCPLCR--AFVTGVNNPTASV 197
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 89 GLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
GLD + I ++ + + + R G C ICL E+ E +R +PEC H FH+ C+D W
Sbjct: 110 GLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVW 169
Query: 147 LKLNGSCPVCRNS 159
LK++GSCP+CRNS
Sbjct: 170 LKIHGSCPLCRNS 182
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 80 AEEEGPRVSGLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRH 136
A + R GLD V+ S+P F Y++ + G + C+ICL E ++ E +R++P C H
Sbjct: 86 ANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNH 145
Query: 137 HFHLCCLDSWLKLNGSCPVCRNS 159
FH+ C+D+WL + +CPVCR++
Sbjct: 146 LFHIDCIDTWLYSHATCPVCRSN 168
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GL+ VI S+P F Y+ + G G C+ICL EF++ E LR MP C H FH C+D
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 146 WLKLNGSCPVCR 157
WL +CPVCR
Sbjct: 154 WLSSWSTCPVCR 165
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 85 PRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
P GLD +I S+P + Y+ + HG CSICL EF + + +R++ C H FH C+D
Sbjct: 126 PENLGLDSKIIESFPEYPYSV--KDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICID 183
Query: 145 SWLKLNGSCPVCR 157
W + + +CPVCR
Sbjct: 184 LWFEGHKTCPVCR 196
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD +VI ++P F Y+ + G C +CL EF++ E LR++P+C H FH C+D+
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 146 WLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSQ 177
WL+ +CP+CR + +P P + E+ L++
Sbjct: 149 WLRSQTTCPLCRANLVPVPGESVSSEIPGLAR 180
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 88 SGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
SG+D +VI S P F++ A C++CL F+ E+LR++P+C+H FH+ C+D+WL
Sbjct: 65 SGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWL 124
Query: 148 KLNGSCPVCRNSPMPTPL 165
+ +CP+CR P +
Sbjct: 125 DAHSTCPLCRYRVDPEDI 142
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 53 CRALR-HNRRRAPDGVVLPRIIFVAEEGAEEEGPRVSGLDPNVINSYPRFQYAAAER--G 109
C A+R HN R V V ++ E R GLD + I Y + + R G
Sbjct: 253 CIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATR--GLDQSTIEKYKTMELGESRRPPG 310
Query: 110 HGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
C ICL E+ E +R +PEC H FH C+D WLK++GSCP+CRNS
Sbjct: 311 TNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 87 VSGLDPNVINSYPRFQYAAAERGH--GETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
+GLD +I F+ + G T CSICL EF E E LR++P+C H FH+ C+D
Sbjct: 125 TAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCID 184
Query: 145 SWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLS 176
WLK + +CP+CR + P VV ++
Sbjct: 185 RWLKSHSNCPLCRAKIIVPTTQQPEHHVVVMN 216
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 86 RVSGLDPNVINSYPRFQYAAAERGHG---ETTCSICLCEFKEAEMLRMMPECRHHFHLCC 142
R +GL ++INS Y +RG G T C +CL EF+E E LR++P+C H FH+ C
Sbjct: 148 RTTGLQQSIINSITICNY---KRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISC 204
Query: 143 LDSWLKLNGSCPVCRNSPMPTPLSTP 168
+D+WL + +CP+CR ++TP
Sbjct: 205 IDTWLSSHTNCPLCRAGIAMISVTTP 230
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL+P++I S P F ++A CS+CL EFK+ E R+MP C+H FH+ C+D W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALFA-MECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFH 109
Query: 149 LNGSCPVCRN--SPMPTPLSTPLQEVV 173
+ SCP+CR+ P + + + EV
Sbjct: 110 SHSSCPLCRSLIEPFAGGVKSTMDEVA 136
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 90 LDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKL 149
LD ++I S ++Y + + CS+CL EF+E E LR++P+C H FH+ C+D+WLK
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 193
Query: 150 NGSCPVCR 157
+ +CP+CR
Sbjct: 194 HSNCPLCR 201
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 88 SGLDPNVINSYPRFQYA----------AAERGHGETTCSICLCEFKEAEMLRMMPECRHH 137
SGLD I++ P F Y C++CLCEF E + LR++P C H
Sbjct: 106 SGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHA 165
Query: 138 FHLCCLDSWLKLNGSCPVCRNS 159
FHL C+D+WL+ N +CP+CR +
Sbjct: 166 FHLNCIDTWLQSNSTCPLCRGT 187
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 11/98 (11%)
Query: 89 GLDPNVINSYPRFQYAAA----ERGHGETT------CSICLCEFKEAEMLRMMPECRHHF 138
GLD +VI + P F Y+AA + G+T+ C++CL EF+E + +R +P C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 139 HLCCLDSWLKLNGSCPVCRNSPMPTP-LSTPLQEVVPL 175
HL C+D WL+ + +CP+CR + + + + TP+ VPL
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPL 217
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 11/98 (11%)
Query: 89 GLDPNVINSYPRFQYAAA----ERGHGETT------CSICLCEFKEAEMLRMMPECRHHF 138
GLD +VI + P F Y+AA + G+T+ C++CL EF+E + +R +P C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 139 HLCCLDSWLKLNGSCPVCRNSPMPTP-LSTPLQEVVPL 175
HL C+D WL+ + +CP+CR + + + + TP+ VPL
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPL 217
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GLD I ++P F Y+ + G G C+ICL EF++ E LR++P+C H FH C+ +
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 146 WLKLNGSCPVCR-----NSPMP-----TPLSTPLQEVVPL 175
WL+ + +CPVCR +P P T L Q VP+
Sbjct: 155 WLQGHVTCPVCRTNLAEQTPEPEVVVETDLEAQQQSAVPV 194
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 88 SGLDPNVINSYPRFQYAAAERGHGE-TTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
SGLD I++ P F Y + C++CL EF + + LR++P C H FHL C+D+W
Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTW 238
Query: 147 LKLNGSCPVCRNS 159
L N +CP+CR S
Sbjct: 239 LLSNSTCPLCRRS 251
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETT-------CSICLCEFKEAEMLRMMPECRHHFHLC 141
GLD + I + P F++ + GE CS+CL EF+E E LR++P C H FH+
Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHID 160
Query: 142 CLDSWLKLNGSCPVCRNS 159
C+D WL+ N +CP+CR S
Sbjct: 161 CIDIWLQGNANCPLCRTS 178
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GLD + S P ++Y A + E C ICL +F+E E ++++P C H FH+ C+D+WL
Sbjct: 115 GLDSQAVRSLPVYRYTKAAKQRNED-CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 149 LNGSCPVCRNSPMPTPLSTPLQE 171
+CP+CR++ + + +QE
Sbjct: 174 SYVTCPLCRSNQLFSDKDLGMQE 196
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GL+ ++ S+P F Y+ + G G C+ICL EF + E LR MP C H FH C+D
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 146 WLKLNGSCPVCR 157
WL +CP CR
Sbjct: 154 WLSSQSTCPACR 165
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 89 GLDPNVINSYPRFQYAAAE-RGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
GL+P VI S P F A + T C++CL KE + R +P C+H FH+ C+D+WL
Sbjct: 81 GLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWL 140
Query: 148 KLNGSCPVCRNSPMPTPLSTP 168
+CPVCR P P P
Sbjct: 141 TTCSTCPVCRTEVEPRPRLEP 161
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%)
Query: 99 PRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRN 158
P Q A + +T C ICL E+ E ++ +PEC H FH C+D WLKL+ SCPVCRN
Sbjct: 248 PIQQQAKSVPWRNDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRN 307
Query: 159 SPMPTPLSTPLQEVV 173
SP P VV
Sbjct: 308 SPSSLPNKAATTNVV 322
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 88 SGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
+GL + +P +Y + E T C+ICL EF + E +R++P C H FH+ C+D+WL
Sbjct: 78 AGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 148 KLNGSCPVCRNS 159
+ SCP CR+S
Sbjct: 138 VSHSSCPNCRHS 149
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 90 LDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKL 149
LDP V+ P F Y+ CS+CL EF+E + R++P+C H FH+ C+D+W +
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 150 NGSCPVCRNSPMPT-PLSTP 168
SCP+CR P P++ P
Sbjct: 148 RSSCPLCRAPVQPAQPVTEP 167
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 86 RVSGLDPNVINSYPRFQYAAA-ERGHGETT-------------CSICLCEFKEAEMLRMM 131
R GLD +VI + P F++ ++ G T CS+CL EF++ E LR++
Sbjct: 95 RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154
Query: 132 PECRHHFHLCCLDSWLKLNGSCPVCR 157
P C H FH+ C+D WL+ N +CP+CR
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCR 180
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL + INS + E T CS+CL EF+E E LR++P+C H FHL C+D+WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLL 168
Query: 149 LNGSCPVCRNSPMPTPLSTPLQEV 172
+ +CP+CR +P+ P QE
Sbjct: 169 SHKNCPLCR-APVLLITEPPHQET 191
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GLD VI S P F G T C++CL +E + RM+P C+H FH+ C+D+WL
Sbjct: 75 GLDSLVIASLPTFVVGIKNDVAG-TECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLT 133
Query: 149 LNGSCPVCRNSPMPT 163
+CPVCR P+
Sbjct: 134 TQSTCPVCRTEAEPS 148
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 89 GLDPNVINSYPRFQYAAA----ERGHGETTCSICLCEFKEAE-MLRMMPECRHHFHLCCL 143
GL+P++I SYP F +++ E +G C+ICL EF+E +LR++ C H FH C+
Sbjct: 85 GLEPHIIQSYPLFPFSSVKDLREDKYG-LECAICLLEFEEEHILLRLLTTCYHVFHQECI 143
Query: 144 DSWLKLNGSCPVCRNSPMPT 163
D WL+ N +CPVCR + P
Sbjct: 144 DQWLESNKTCPVCRRNLDPN 163
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 88 SGLDPNVINSYPRFQYAAA-ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
SG+D + I++ P F Y + + C++CLCEF+ + LR++P+C H FH+ C+D+W
Sbjct: 106 SGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTW 165
Query: 147 LKLNGSCPVCR 157
L + +CP+CR
Sbjct: 166 LLSHSTCPLCR 176
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 88 SGLDPNVINSYPRFQYAA-AERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
SG+D ++I++ P F Y + C +CLCEF+ + LR++P+C H FH+ C+D+W
Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTW 157
Query: 147 LKLNGSCPVCRNS 159
L + +CP+CR++
Sbjct: 158 LLSHSTCPLCRSN 170
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 85 PRVSGLDPNVINSYPRFQYAAAERGHGETT--CSICLCEFKEAEMLRMMPECRHHFHLCC 142
PR LD V++ P F Y++ E CS+CL EF+E + R++P+C H FH+ C
Sbjct: 76 PRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDC 135
Query: 143 LDSWLKLNGSCPVCRNSPMPTPLSTPLQEV 172
+D+W + +CP+CR P+ P Q +
Sbjct: 136 IDTWFRSRSTCPLCR-----APVQPPFQVI 160
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 89 GLDPNVINSYPRFQYAAAERGHG-------ETTCSICLCEFKEAEMLRMMPECRHHFHLC 141
GL + S PR + AAE G T C+ICL +F + E +R++P C H FH+
Sbjct: 69 GLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVE 128
Query: 142 CLDSWLKLNGSCPVCR 157
C+D WL SCP CR
Sbjct: 129 CIDKWLVSRSSCPSCR 144
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 88 SGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
+GL + P Y + T C ICL +F++ E +R++P+C H FH+ C+D+WL
Sbjct: 87 TGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWL 146
Query: 148 KLNGSCPVCRNSPM---PTPLST 167
SCP CR S + P+P++
Sbjct: 147 LSRSSCPTCRQSLLLEQPSPMAV 169
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 86 RVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
R LD ++++ P F + + TC+ICL +++ E LR++P C+H FHL C+DS
Sbjct: 203 RTIRLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCIDS 261
Query: 146 WL-KLNGSCPVCRNSPMPTPLSTPLQE 171
WL K SCPVC++ +S+ + +
Sbjct: 262 WLTKWGTSCPVCKHDIRTETMSSEVHK 288
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 90 LDPNVINSYPRFQYAAA-ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
+D + I++ P Y H + C++CL EF + LR++P+C H FH+ C+D+WL
Sbjct: 96 IDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLL 155
Query: 149 LNGSCPVCRNS 159
N +CP+CR++
Sbjct: 156 TNSTCPLCRDN 166
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 89 GLDPNVINSYPRFQYA-AAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
GL V+ S P+ ++ + C+ICL EF + LR++P+C H FH+ C+D+WL
Sbjct: 84 GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143
Query: 148 KLNGSCPVCRN 158
+ SCP CR
Sbjct: 144 GSHSSCPSCRQ 154
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 86 RVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
R LD ++++ P F + + TC+ICL +++ E LR++P C+H FHL C+DS
Sbjct: 203 RTIRLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCIDS 261
Query: 146 WL-KLNGSCPVCRNSPMPTPLSTPLQEVVPLS 176
WL K SCPVC++ +S+ EV+ L
Sbjct: 262 WLTKWGTSCPVCKHDIRTETMSS---EVILLD 290
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYAAA---ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GL ++++ P+ + + + +CS+CL +F+ E +R +P C H FHL C+D+
Sbjct: 162 GLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 221
Query: 146 WLKLNGSCPVCR 157
WL +GSCP+CR
Sbjct: 222 WLFRHGSCPMCR 233
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 89 GLDPNVINSYPRFQYA-AAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
GL V+ S P+ Y+ + C+ICL EF + LR++P+C H FH+ C+D+WL
Sbjct: 77 GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWL 136
Query: 148 KLNGSCPVCRN 158
+ SCP CR
Sbjct: 137 GSHSSCPSCRQ 147
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 83 EGPRVS-GLDPNVINSYPRFQYAAAERGHGET---TCSICLCEFKEAEMLRMMPECRHHF 138
E P V+ GL+ +INS+P F Y++ + E C+ICL EF +LR++ C H F
Sbjct: 74 EAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVF 133
Query: 139 HLCCLDSWLKLNGSCPVCR 157
H C+D W + + +CPVCR
Sbjct: 134 HQECIDLWFESHRTCPVCR 152
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 113 TTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
T C+ICL + K E+ R +P+C H FHL C+D WL +GSCP+CR +
Sbjct: 174 THCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQA 220
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYAA---AERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GL +++ P+ + +CS+CL +F+ E +R +P C H FHL C+D+
Sbjct: 167 GLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 226
Query: 146 WLKLNGSCPVCR 157
WL +GSCP+CR
Sbjct: 227 WLLRHGSCPMCR 238
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 77 EEGAEEEGPRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRH 136
E+ + G+ + P Y+ E T C ICL +F E E +R++P+C H
Sbjct: 76 EDPVDTNANVAKGIKKRALKVIPVDSYSP-ELKMKATECLICLGDFVEGETVRVLPKCNH 134
Query: 137 HFHLCCLDSWLKLNGSCPVCRNS 159
FH+ C+D+WL + SCP CR S
Sbjct: 135 GFHVKCIDTWLLSHSSCPTCRQS 157
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 109 GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPT 163
G T C+IC+ EF E E +R++P C H FH+ C+D WL SCP CR +P
Sbjct: 107 GDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPV 161
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
G+ P V+ S P + + + C +CL E + + R++P C H FH+ C+DSWL+
Sbjct: 63 GIKPYVLRSIPIVDFNTKDFKY-VLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQ 121
Query: 149 LNGSCPVCRN 158
N +CP+CR
Sbjct: 122 SNSTCPICRK 131
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
+ CSICLC +++ LR +P CRHHFH C+D WL++N +CP+C+
Sbjct: 320 DAECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCK 364
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 84 GPRVSGLDPNVINSYPRFQYAAAERGHG-ETTCSICLCEFKEAEMLRMMPECRHHFHLCC 142
G G+ + +P Y+ G + C ICL +F E LR++P+C H FH+ C
Sbjct: 103 GSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRC 162
Query: 143 LDSWLKLNGSCPVCRN 158
+D WL+ + +CP CRN
Sbjct: 163 IDKWLQQHLTCPKCRN 178
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPM-PTPLSTPLQEVV 173
CSICL E + + R++P+C H FH+ C+D W + + +CP+CRN+ + P S+ E V
Sbjct: 127 CSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQV 186
Query: 174 P 174
P
Sbjct: 187 P 187
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 88 SGLDPNVINSYPRFQYAAA-ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
S + +++ S P Y E G TC+IC+ +++ E+LR++P C+H +H C+DSW
Sbjct: 88 SRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILP-CKHKYHAVCIDSW 146
Query: 147 L-KLNGSCPVCRNSPMPTPLSTPLQEVVPL 175
L + CPVC+ +P P E PL
Sbjct: 147 LGRCRSFCPVCKQNPRTGNDVPPASETTPL 176
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 111 GETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTP 164
+T CS+CL +++ E L+ MP C H FH+ C+D WL + +CP+CR S +P P
Sbjct: 93 NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKP 146
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 88 SGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
GL P + P+F+Y +G C +C+ F++ + R +P C H FH C+D WL
Sbjct: 88 DGLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWL 147
Query: 148 KLNGSCPVCRN 158
+CP+CR+
Sbjct: 148 IKVSTCPICRD 158
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 100 RFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
R++ AAE H C+ICL + E E +R + C H FH+ C+D WL +CP+CR
Sbjct: 55 RWRKTAAEEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAE 114
Query: 160 PMPTPLSTPL 169
P P PL
Sbjct: 115 IPPVPPGNPL 124
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL + +N P+ + + +CS+CL +F+ E +R +P C H FHL C+D WL+
Sbjct: 152 GLTGDSLNRIPKVRIT--DTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLR 209
Query: 149 LNGSCPVCR 157
+ SCP+CR
Sbjct: 210 RHASCPLCR 218
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL + +N P+ + + +CS+CL +F+ E +R +P C H FHL C+D WL+
Sbjct: 176 GLTGDSLNRIPKVRIT--DTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLR 233
Query: 149 LNGSCPVCR 157
+ SCP+CR
Sbjct: 234 RHASCPLCR 242
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTP 164
++ CS+CL +++ E L+ MP C H FH+ C+D WL + +CP+CR S +P P
Sbjct: 108 DSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKP 160
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 84 GPRVSGLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLC 141
G G++ + +P Y+ G GE C ICL +F E +RM+P+C H FH+
Sbjct: 104 GSSNKGINKKALRMFPVVSYSPEMNLPGLGEE-CVICLSDFVSGEQIRMLPKCHHGFHVR 162
Query: 142 CLDSWLKLNGSCPVCRN 158
C+D WL+ + +CP CR+
Sbjct: 163 CIDKWLQQHLTCPKCRH 179
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 76 AEEGAEEEGPRVS--GLDPNVINSYPRFQYAAAERGHG-ETTCSICLCEFKEAEMLRMMP 132
+E G + R++ G+ + S+ Y+ G +T C+ICL EF E ++++P
Sbjct: 89 SEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLP 148
Query: 133 ECRHHFHLCCLDSWLKLNGSCPVCRN 158
C H FH+ C+D WL + SCP CR+
Sbjct: 149 TCHHGFHVRCIDKWLSSHSSCPTCRH 174
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 84 GPRVSGLDPNVINSYPRFQYAAAERGHGET-TCSICLCEFKEAEMLRMMPECRHHFHLCC 142
G GL + I S P +Y + +G +C IC ++++ E L ++P C+H +H C
Sbjct: 256 GTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLP-CKHSYHSEC 314
Query: 143 LDSWLKLNGSCPVC 156
+++WLK+N CPVC
Sbjct: 315 INNWLKINKVCPVC 328
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL + I + P F Y +E +++CSICL +++E E+ R + C H FH+ C+D WL
Sbjct: 147 GLSKSSIQNIPMF-YNRSEH-QTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLL 204
Query: 149 LNGSCPVCRNSPMPTPLST 167
+CP+CR+ ST
Sbjct: 205 RQETCPICRDHLSHNTTST 223
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 93 NVINSYPRFQYAAAER---GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKL 149
+V++S P F++++ R C++CL +F+ + LR++P C H FH C+D WL
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 150 NGSCPVCRNSPM 161
N +CP+CR SP+
Sbjct: 152 NQTCPLCR-SPL 162
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 100 RFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
R++ AE H C+ICL E E +R + C H FH+ C+D WL+ CP+CR
Sbjct: 55 RWRKTTAEEKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAE 114
Query: 160 PMPTPLSTPLQ 170
P P PL+
Sbjct: 115 IPPVPPGNPLR 125
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
CS+CL F +++ LR + EC+H FH+ C+++WLK + +CP+CR
Sbjct: 142 CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTD 186
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 97 SYPRFQYAAA-ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPV 155
+ P Y++ E E C+ICL EF++ E ++++ +C+H FH+ C+ WL SCP
Sbjct: 88 TTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPT 147
Query: 156 CRNSPMPTPLSTPLQEV 172
CR S TP +
Sbjct: 148 CRTSIFSQHSETPSSHI 164
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 71 RIIFVAEEGAEEEGPRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRM 130
R +F ++E+ +GLD ++ S + + G C++CL + + + R+
Sbjct: 80 RFVFAQ---SQEDPLHNAGLDSKILQSIHVVVFKCTDFKDG-LECAVCLSDLVDGDKARV 135
Query: 131 MPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
+P C H FH+ C+D W + + +CP+CRN+
Sbjct: 136 LPRCNHGFHVDCIDMWFQSHSTCPLCRNT 164
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 84 GPRVSGLDPNVINSYPRFQY------AAAERGHGETTCSICLCEFKEAEMLRMMPECRHH 137
G G + I+S P ++Y + + + + + C ICL ++KE E +R +P C H
Sbjct: 252 GSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHR 310
Query: 138 FHLCCLDSWLKLNGSCPVCR 157
FHL C+D WL++ CP+C+
Sbjct: 311 FHLKCVDQWLRIISCCPLCK 330
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 84 GPRVSGLDPNVINSYPRFQY------AAAERGHGETTCSICLCEFKEAEMLRMMPECRHH 137
G G + I+S P ++Y + + + + + C ICL ++KE E +R +P C H
Sbjct: 252 GSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHR 310
Query: 138 FHLCCLDSWLKLNGSCPVCR 157
FHL C+D WL++ CP+C+
Sbjct: 311 FHLKCVDQWLRIISCCPLCK 330
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 89 GLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
G+ + +P Y+ G GE C ICL +F E LR++P+C H FH+ C+D W
Sbjct: 108 GIKKKALRMFPVVSYSREMNLPGIGEE-CVICLSDFVSGEQLRLLPKCNHGFHVRCIDKW 166
Query: 147 LKLNGSCPVCRNSPMPT 163
L+ + +CP CR+ + T
Sbjct: 167 LQHHLTCPKCRHCLVET 183
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 31/114 (27%)
Query: 69 LPRIIFVAEEGAEEEGPRVSGLDPNVINSYPRFQYAAA---ERGHG-------------- 111
LP II + A++EG N I+ P+F++ E+ G
Sbjct: 272 LPCIIAILYAVADQEGA-----SKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSP 326
Query: 112 --------ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
+ C ICLCE+++ LR +P C HHFH C+D WL +N CP+C+
Sbjct: 327 IERSLSPEDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCK 379
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 27/114 (23%)
Query: 69 LPRIIFVAEEGAEEEGPRVSGLDPNVINSYPRFQYAA--------AERGHG--------- 111
LP +I V G E + G IN+ P +++ + +E G G
Sbjct: 287 LPCLISVL--GFRENFSQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQK 344
Query: 112 -------ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRN 158
+ +C ICL + + E +R +P C H FH+ C+D WLK+N +CP+C+N
Sbjct: 345 KRLISGEDASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCKN 397
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK 148
GL + IN R +++AE CSICL F + +ML +P C H FH CL+ WL+
Sbjct: 177 GLTQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLP-CTHSFHSSCLNPWLR 235
Query: 149 LNGSCPVCR 157
G CP CR
Sbjct: 236 ACGDCPCCR 244
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
E C ICL E+K E ++ MP C+H FH C++ WL +GSCPVCR
Sbjct: 110 EGECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFHGSCPVCR 154
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 77 EEGAEEEG---PRVSGLDPNVINSYPRFQYAAA----ERGHGETTCSICLCEFKEAEMLR 129
E E +G PR GL +VI ++P F Y E + E C +CL + +++
Sbjct: 46 ETENENQGRREPRCQGLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIK 105
Query: 130 MMPECRHHFHLCCLDSWLKLNGSCPVCRN--SPMPTPLSTPLQEVV 173
++P C H F C+ WL+ + +CPVCR PM + L+ +V
Sbjct: 106 VLPNCMHMFDEECIGKWLESHATCPVCRRLAEPMTSNGDKVLERIV 151
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 89 GLDPNVINSYPRFQYAAAER--GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
G+ + P Y+ G GE C ICL +F E LR++P+C H FHL C+D W
Sbjct: 103 GIKKKALKMLPVVNYSPEINLPGVGEE-CVICLSDFVAGEQLRVLPKCNHGFHLRCIDKW 161
Query: 147 LKLNGSCPVCRN 158
L + +CP CR+
Sbjct: 162 LTQHMTCPKCRH 173
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 97 SYPRFQYAAAER-GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPV 155
S ++ E+ G E CSICL E ++ + + +CRH FH C+DSWLK N SCP
Sbjct: 98 SIEEMEFKDIEKEGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPN 157
Query: 156 CR 157
CR
Sbjct: 158 CR 159
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 84 GPRVSGLDPNVINSYPRFQYAAA-ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCC 142
G +S + +++ S P Y+ E TC+IC+ ++ E LR++P C+H +H C
Sbjct: 201 GQGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILP-CKHKYHAVC 259
Query: 143 LDSWL-KLNGSCPVCRNSPMPTPLSTPLQEVVPL 175
+DSWL + CPVC+ +P P E PL
Sbjct: 260 IDSWLGRCRSFCPVCKQNPRTGNDVPPASETTPL 293
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 94 VINSYPRFQYAAAER--------GHGETTCSICLCEFKEA--EMLRMMPECRHHFHLCCL 143
V+ S FQ E+ ETTCSIC+ +F E+ + + ++P+C H FH C+
Sbjct: 124 VVRSRDMFQRLLEEQTMELTNLGDEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCI 183
Query: 144 DSWLKLNGSCPVCRNSPMPTPLST 167
WLK SCP+CR P L T
Sbjct: 184 FKWLKRQRSCPLCRRVPYEEDLET 207
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 112 ETTCSICLCEFKEA--EMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTPLST 167
ETTCSICL +F E+ + + ++P+C H FH C+ WLK SCP+CR P L T
Sbjct: 134 ETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCRRVPYEEDLET 191
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 94 VINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSC 153
+I P+F+ A GE C ICL EF +R +P C H+FH+ C+D WL+LN C
Sbjct: 216 LIQELPKFRLKAVPDDCGE--CLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKC 272
Query: 154 PVCRNSPMP 162
P CR S P
Sbjct: 273 PRCRCSVFP 281
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 112 ETTCSICLCEFKEA--EMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTPL 165
ETTCSICL +F E+ + + ++P+C H FH C+ WLK SCP+CR P L
Sbjct: 150 ETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCRRVPYEEDL 205
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 37/52 (71%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPT 163
++ CS+CL +++ + L+ +P C+H FH+ C+D WL + +CP+CR + +P+
Sbjct: 97 DSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPS 148
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
E TCS+CL + E++R +P C H FH C+D WL+ G+CPVC+
Sbjct: 208 ELTCSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 89 GLDPNVINSYPRFQYAAAERGHGETT-CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
GLD +VI+S P F Y E E C ICL ++ + R + C H FH+ C+D WL
Sbjct: 111 GLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWL 170
Query: 148 KLNGSCPVCRNSPMPTPLS 166
+ +CP+CR SP+ +S
Sbjct: 171 SSHSTCPLCR-SPVLAAVS 188
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRN 158
+ C ICL ++ E LR +P C H FH C+D WLK+N SCP+C++
Sbjct: 360 DAVCCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCKS 405
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 57 RHNRRRAPDGVVLPRIIFVAEEGAEEEGPRVSGLDPNV-INSYPRFQYAAAERGHGETTC 115
R + +P ++LP + P V LD V + E G ++ C
Sbjct: 49 RASSLSSPSPMILP---VSSSHQTSSHLPSVCLLDVKVELKDKLHVVLFNEELGTRDSLC 105
Query: 116 SICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
+CL EF+ E L MP C+H FHL C+ WL + +CP+CR+S
Sbjct: 106 CVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSS 149
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 88 SGLDPNVINSYPRFQYAA-AERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSW 146
GL + P+F+++ + E+ C +C F++ + R +P C H FH C+D+W
Sbjct: 82 DGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTW 141
Query: 147 LKLNGSCPVCR 157
L +CP+CR
Sbjct: 142 LLKASTCPICR 152
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 86 RVSGLDPNVINSYPR-FQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLD 144
R GLDP I S P E C ICL F+E E ++++P C H +H C+D
Sbjct: 77 RSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVD 136
Query: 145 SWLKLNGSCPVCRNS 159
WLK SCP+CR S
Sbjct: 137 RWLKTESSCPLCRVS 151
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 104 AAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPT 163
AA C++CL E +E E +R + CRH FH C+D+WL CP+CR P
Sbjct: 51 AAENDDSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPPL 110
Query: 164 PLSTPL 169
P ++P+
Sbjct: 111 PPASPM 116
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 110 HGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPL 169
H + C ICL +++ LR +P C HHFH C+D WL +N +CP+C+ + + +
Sbjct: 320 HEDAECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCKYNILKSSNYEEG 378
Query: 170 QEV 172
+EV
Sbjct: 379 EEV 381
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKL--NGSCPVCRNSPMPTPLSTPL 169
E C++CL +F + +R +P+C H FH CLD W+ +CP+CRN +P STP
Sbjct: 82 EDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPEEKSTPF 141
Query: 170 Q 170
Sbjct: 142 D 142
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 93 NVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK-LNG 151
+V++ P Y ++ + C ICL E++EA+ +R +P C H FH C+D WLK ++
Sbjct: 469 DVVDLLPIKLYTKSQ-SEDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHR 526
Query: 152 SCPVCR 157
CP+CR
Sbjct: 527 VCPLCR 532
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 105 AAERGHGETTCSICLCEFKEA-EMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSP 160
+A+ + TCSIC+ +F E+ E + +P+C H FH CL WL L SCP+CR P
Sbjct: 149 SADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRKVP 205
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CSICL +F + + MP C+H FH+ C+ WL+L+ SCPVCR
Sbjct: 241 CSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHSSCPVCR 282
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CSICL +F + + MP C+H FH+ C+ WL+L+ SCPVCR
Sbjct: 241 CSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHSSCPVCR 282
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 81 EEEGPRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHL 140
+E R G N IN+ P + + + + TC ICL K + +R +P C H FH
Sbjct: 558 DENNHRHGGASANRINNLP---ESTVQTDNFQETCVICLETPKIGDTIRHLP-CLHKFHK 613
Query: 141 CCLDSWLKLNGSCPVCRNS 159
C+D WL + SCPVC++S
Sbjct: 614 DCIDPWLGRSKSCPVCKSS 632
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 82 EEGPRVSGLDP---NVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHF 138
E P G P + I++ P + C++C+ EF++ ++ MP C+H F
Sbjct: 180 ENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVF 238
Query: 139 HLCCLDSWLKLNGSCPVCR 157
H CL WL+L+ SCPVCR
Sbjct: 239 HQDCLLPWLELHNSCPVCR 257
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTP 164
+ C ICL +++ LR +P C HHFH C+D WL +N +CP+C+ + + +
Sbjct: 350 DAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILKSS 401
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPT 163
+ C ICL +++ LR +P C HHFH C+D WL +N +CP+C+ + + +
Sbjct: 279 DAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILKS 329
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CS+CL +F++ + MP C+H FH+ C+ WL+L+ SCPVCR
Sbjct: 259 CSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSCPVCR 300
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 93 NVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGS 152
+V++ P Y ++ + C ICL E++EA+ +R +P C H FH C+D WLK S
Sbjct: 469 DVVDLLPIKLYTKSQ-SEDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHS 526
Query: 153 --CPVCR 157
CP+CR
Sbjct: 527 RVCPLCR 533
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 86 RVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
+ +G++P+V+ S P + A C +CL +F + + R++P C H FH D+
Sbjct: 51 KATGINPSVLLSIPVVSFNA-NAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDT 109
Query: 146 WLKLNGSCPVCR 157
WL + +CP CR
Sbjct: 110 WLHSDYTCPNCR 121
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 104 AAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
A E+G C IC E+ +++M +P C+H +HL C++ WLK++ SCP CR
Sbjct: 474 AMVEKGE----CVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHTSCPQCR 522
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 111 GETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLN-GSCPVCRNSPMPTP 164
E C ICL EF++ + LR++ C+H FH+ C+ WL + SCP CR + +P
Sbjct: 98 NEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFSSP 152
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 89 GLDPNVINSYPRFQYAAA-ERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL 147
G+ ++ + P +++ E TC+ICL ++ + LR++P C H FH C+DSWL
Sbjct: 205 GMSRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLP-CCHKFHAACVDSWL 263
Query: 148 -KLNGSCPVCRNSPMPTPLSTPLQEVVPL 175
CPVC+ + P E PL
Sbjct: 264 TSWRTFCPVCKRDARTSTGEPPASESTPL 292
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 86 RVSGLDPNVINSYPRFQYA----AAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLC 141
R++ DPN + P + A A + CS+CL +F+ ++MP C H FH
Sbjct: 190 RLAENDPNRYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMP-CTHKFHSD 248
Query: 142 CLDSWLKLNGSCPVCR 157
CL WL+L+ SCPVCR
Sbjct: 249 CLLPWLELHSSCPVCR 264
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 81 EEEGPRVSGLDPNVINSY-PRFQYAAA------ERGHGETTCSICLCEFKEAEMLRMMPE 133
E EG + GL +VI + P+ E+ C+ICL + E R+ P
Sbjct: 90 EREGKK-RGLKQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPV 148
Query: 134 CRHHFHLCCLDSWLKLNGSCPVCRNS 159
CRH +H C+D+WLK + +CP CR
Sbjct: 149 CRHIYHALCIDAWLKNHLTCPTCRKD 174
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CS+CL +F+ E + + P C+H FH C+ WLK G CPVCR
Sbjct: 172 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCR 213
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 101 FQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
++ + G + C ICL EF++ + + CRH FH C+D WL N +CP CR
Sbjct: 96 LEFKDIKEGSNKIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCR 152
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CS+CL +F+ E + + P C+H FH C+ WLK G CPVCR
Sbjct: 144 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCR 185
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 89 GLDPNVINSYPRFQYAA---AERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDS 145
GL +++ P+ + +CS+CL +F+ E +R +P C H FHL C+D+
Sbjct: 167 GLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 226
Query: 146 WL 147
WL
Sbjct: 227 WL 228
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
+ C ICL +++ L +P C HHFH C+ WLK+N +CP+C+
Sbjct: 289 DADCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCK 333
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
E CSICL EFK L + +CRH FH C+ SW+ N +CP+CR S
Sbjct: 75 EGCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICRCS 122
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
C ICL E+++ +R + C H FHL C+DSWL +CP CR S
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRS 124
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 101 FQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL-KLNGSCPVCRNS 159
F Y + G G + C +CL + KE E +R + ECRH FH CL+ WL + N +CP+CR++
Sbjct: 72 FSYRCGDGGGGGSDCVVCLSKLKEGEEVRKL-ECRHVFHKKCLEGWLHQFNFTCPLCRSA 130
Query: 160 PMPTPLSTPLQEVV 173
+ + Q V
Sbjct: 131 LVSDDCVSKTQRSV 144
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 94 VINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSC 153
INS P + + + C++C+ EF +P C+H +H C+ WL+LN SC
Sbjct: 203 TINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELP-CKHIYHKDCIVPWLRLNNSC 261
Query: 154 PVCR 157
P+CR
Sbjct: 262 PICR 265
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 93 NVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGS 152
+VI P + A E G C++C E E +R +P C H +H C+ WL + +
Sbjct: 313 SVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLP-CSHFYHGECIIPWLGIRNT 371
Query: 153 CPVCR 157
CPVCR
Sbjct: 372 CPVCR 376
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 114 TCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
C ICL +FK +++R++ C+H FH+ C+DSW +CP+CR
Sbjct: 92 VCVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICR 135
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMP 162
T C++CL + + + R++P C H FH C D+WL + CPVCR P
Sbjct: 101 STECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRAELAP 151
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CS+CL +F+ + MP C+H FH CL WL+L+ SCPVCR
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CS+CL +F+ + MP C+H FH CL WL+L+ SCPVCR
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
CS+CL +F+ + MP C+H FH CL WL+L+ SCPVCR
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 74 FVAEEGAEEEGPRVSGLDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPE 133
F ++ G + P + + + + PR + +G +C+ICL E+ + ++ MP
Sbjct: 73 FFSDGGKQGRSPALK----SEVENMPRVVIGEDKEKYG-GSCAICLDEWSKGDVAAEMP- 126
Query: 134 CRHHFHLCCLDSWLKLNGSCPVCR 157
C+H FH C++ WL + +CP+CR
Sbjct: 127 CKHKFHSKCVEEWLGRHATCPMCR 150
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNG--SCPVCRNSPMP 162
E C++CL +F+ + +R +P+C H FH CLD W+ CPVCR+ +P
Sbjct: 83 EDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFLP 135
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
C ICL ++K+ E +R +P C H FH C+D WL++ CP+C+
Sbjct: 297 CCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
C ICL ++K+ E +R +P C H FH C+D WL++ CP+C+
Sbjct: 297 CCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCR 157
+ C ICL +++ L +P C HHFH C+ WLK+ +CP+C+
Sbjct: 304 DADCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCK 348
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
CSIC E+ + + L +P C+H +H+ C+ WL++ CP+C+ S
Sbjct: 475 CSICQEEYVDGDELGTIP-CQHMYHVSCVQQWLRMKNWCPICKTS 518
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
CSIC E+ + + L +P C+H +H+ C+ WL++ CP+C+ S
Sbjct: 475 CSICQEEYVDGDELGTIP-CQHMYHVSCVQQWLRMKNWCPICKTS 518
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 90 LDPNVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLK- 148
L+ N + SY AA++ C +CL + K E +R + +CRH FH CL+ WL+
Sbjct: 56 LNLNRLFSYRYSDNAASD-------CIVCLSKLKTGEEVRKL-DCRHVFHKQCLEGWLQH 107
Query: 149 LNGSCPVCRNSPMP 162
LN +CP+CR+ +P
Sbjct: 108 LNFNCPLCRSPLLP 121
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLN-GSCPVCRNSPMPTPLSTPLQE 171
C++CL EF+ + +R + CRH FH CLD W+ + +CP+CR +P + +
Sbjct: 94 CAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQEEFNQ 151
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTP 164
+ CSIC E+ + + + +P C+H +H+ C WL++ CP+C+ S P
Sbjct: 465 DVKCSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICKTSAESQP 516
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTP 164
+ CSIC E+ + + + +P C+H +H+ C WL++ CP+C+ S P
Sbjct: 465 DVKCSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICKTSAESQP 516
>AT3G51325.1 | Symbols: | RING/U-box superfamily protein |
chr3:19052259-19052531 FORWARD LENGTH=90
Length = 90
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 98 YPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGS--CPV 155
YPR Q G E CS+CL + ++++ +P C H FH C+D+W ++ CP+
Sbjct: 12 YPRVQ---GGEGREEECCSVCLMRMEAKDVIKSLP-CSHEFHSLCVDTWFNVSRKICCPL 67
Query: 156 CRNSPMPTPLSTPL 169
CR SP L+ L
Sbjct: 68 CRFSPTTILLTDEL 81
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 114 TCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWL-KLNGSCPVCRNSPMPT---PLST 167
+C+ICL ++ + LR++P C H FH+ C+DSWL CPVC+ T PL+T
Sbjct: 231 SCAICLEDYIVGDKLRVLP-CSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLAT 287
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 93 NVINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGS 152
+ I S PR + + G E C++C F+ R MP C+H FH C+ WL + S
Sbjct: 178 SAIESLPRVEISDCHIGS-EANCAVCTEIFETETEAREMP-CKHLFHDDCIVPWLSIRNS 235
Query: 153 CPVCR 157
CPVCR
Sbjct: 236 CPVCR 240
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 78 EGAEEEGPRVSGLDPN-----VINSYPRFQYAAAERGHGETTCSICLCEFKEAEMLRMMP 132
EG ++ G +P V+ S R Y GE C ICL EF E + +P
Sbjct: 18 EGTITVNAKIDGYNPTPASKLVVKSLARKIYKMTTSSTGEM-CIICLEEFSEGRRVVTLP 76
Query: 133 ECRHHFHLCCLDSWLKLNGSCPVCR 157
C H F C+ W + N SCP+CR
Sbjct: 77 -CGHDFDDECVLKWFETNHSCPLCR 100
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 109 GHGETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNG--SCPVCRNSPMPTPLS 166
G G C++CL EF+ + +R + C+H FH CLD W+ +CP+CR + L
Sbjct: 99 GSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCRTPFISDELQ 158
Query: 167 TPLQEVV 173
+ V
Sbjct: 159 VAFNQRV 165
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 115 CSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGS-CPVCRNSPMPTPLSTPLQEVV 173
C ICL +++ + LR++P C H FH+ C+D WL S CPVC+ P E
Sbjct: 234 CCICLENYEKGDKLRILP-CHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPSEHT 292
Query: 174 PL 175
P
Sbjct: 293 PF 294
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNS 159
+ C+ICL FK+ E L +P C H FH CL WL N CP CR
Sbjct: 147 QQDCAICLDRFKKGETLVHLP-CAHKFHSICLLPWLDTNVYCPYCRTD 193
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 112 ETTCSICLCEFKEAEMLRMMPECRHHFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQ 170
E C+IC+ ++ E + C H FH C++ WL+LN CP+CR+S +P + + Q
Sbjct: 180 ENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSS-IPKDVKSGYQ 237