Miyakogusa Predicted Gene

Lj0g3v0129579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129579.1 Non Chatacterized Hit- tr|D8RY83|D8RY83_SELML
Putative uncharacterized protein OS=Selaginella moelle,40.52,4e-19,
,CUFF.7842.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01500.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   221   2e-58
AT1G75180.3 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   137   2e-33
AT1G75180.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   137   2e-33
AT1G19400.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   129   1e-30
AT1G19400.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   129   1e-30
AT1G75180.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...    54   5e-08

>AT1G01500.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:185260-186573 FORWARD LENGTH=327
          Length = 327

 Score =  221 bits (563), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 108/171 (63%), Positives = 133/171 (77%), Gaps = 4/171 (2%)

Query: 1   MDCHLATGS---IGSGSSAFFRPKLGVSAPSIEVYVAGCCSGVPVILSKTIQMSPRRRVP 57
           MDC++A G+    G  +S FF+PK GVS+PS+EVY+AGCC GVPVIL+KTIQ SPRR+V 
Sbjct: 157 MDCYIAMGNGHVSGPSASVFFQPKFGVSSPSVEVYIAGCCGGVPVILTKTIQASPRRKVA 216

Query: 58  RHFTLDAIPEDEEMMTEKENG-VRNGLIPLPKLQITESEIDDDYDSDGKMGHVFYSQEMY 116
           RH TLDAIPEDEE+  E++ G + + L    K+Q+ ESE+D+  DSD KM   +Y + MY
Sbjct: 217 RHVTLDAIPEDEEVGKEQDIGTIGDELARQSKVQMMESEVDEYDDSDMKMAQRYYPEGMY 276

Query: 117 PGEDGQLTWFNAGVRVGVGIGLGMCVGIGIGVGLLMRSYQTTTRNFRRKFF 167
             EDGQL+WFNAGVRVGVGIGLGMC+G+GIGVGLLMRSYQ TT N RR+F 
Sbjct: 277 VDEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQATTSNLRRRFL 327


>AT1G75180.3 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216150-28217911 REVERSE
           LENGTH=315
          Length = 315

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 103/163 (63%), Gaps = 15/163 (9%)

Query: 12  SGSSAFFRPK------LGVSAPSIEVYVAGCCSGVPVILSKTIQMSPRRRVPRHFTLDAI 65
           +  S F + K      L    P+IEVYV GC SG P+IL+KT+Q+  R++  R   LD+I
Sbjct: 161 TAESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSI 220

Query: 66  PEDEEMMTEKENGVRNGLIPLPKLQITE-SEIDDDYDSDGKMGHVFYSQEMYPGEDGQLT 124
           PE E     K N            Q+TE      +Y+  G+   +++++E   GEDG+++
Sbjct: 221 PEYETDEPHKGNSSE------LDYQVTEYGSYKQEYE--GEHSDMYWNREYADGEDGEMS 272

Query: 125 WFNAGVRVGVGIGLGMCVGIGIGVGLLMRSYQTTTRNFRRKFF 167
           WFNAGVRVGVGIGLG+CVG+GIGVGLL+R+YQ+TTRNFRR+  
Sbjct: 273 WFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRNFRRRII 315


>AT1G75180.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216150-28217911 REVERSE
           LENGTH=315
          Length = 315

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 103/163 (63%), Gaps = 15/163 (9%)

Query: 12  SGSSAFFRPK------LGVSAPSIEVYVAGCCSGVPVILSKTIQMSPRRRVPRHFTLDAI 65
           +  S F + K      L    P+IEVYV GC SG P+IL+KT+Q+  R++  R   LD+I
Sbjct: 161 TAESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSI 220

Query: 66  PEDEEMMTEKENGVRNGLIPLPKLQITE-SEIDDDYDSDGKMGHVFYSQEMYPGEDGQLT 124
           PE E     K N            Q+TE      +Y+  G+   +++++E   GEDG+++
Sbjct: 221 PEYETDEPHKGNSSE------LDYQVTEYGSYKQEYE--GEHSDMYWNREYADGEDGEMS 272

Query: 125 WFNAGVRVGVGIGLGMCVGIGIGVGLLMRSYQTTTRNFRRKFF 167
           WFNAGVRVGVGIGLG+CVG+GIGVGLL+R+YQ+TTRNFRR+  
Sbjct: 273 WFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRNFRRRII 315


>AT1G19400.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:6712222-6713676 REVERSE LENGTH=303
          Length = 303

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 102/173 (58%), Gaps = 22/173 (12%)

Query: 1   MDCHLATGSIGSGSSAFFRPK------LGVSAPSIEVYVAGCCSGVPVILSKTIQMSPRR 54
           M+C  A  + GSG   F + K      L    P+IEVYV GC SG P+IL+KT+Q+  ++
Sbjct: 147 MNCE-AEVTAGSG---FLKEKSINGQELSSPLPTIEVYVTGCFSGTPIILTKTLQLGLKK 202

Query: 55  RVPRHFTLDAIPEDEEMMTEKENGVRNGLIPLPKLQITESEIDDDYDSDGKMGHVFYSQE 114
           +  R   LDAIPE E    +K+      L    +    + E +         G +++  E
Sbjct: 203 KQSRRMALDAIPEYETAEPQKDTSYALDLQATTEYGNYKEEYE---------GDMYWRSE 253

Query: 115 MYPGEDGQLTWFNAGVRVGVGIGLGMCVGIGIGVGLLMRSYQTTTRNFRRKFF 167
                DG+++WFNAGVRVGVGIGLG+CVG+GIGVGLL+R+YQ+TTR FRR+  
Sbjct: 254 CI---DGEMSWFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRTFRRRLL 303


>AT1G19400.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:6712222-6713676 REVERSE LENGTH=303
          Length = 303

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 102/173 (58%), Gaps = 22/173 (12%)

Query: 1   MDCHLATGSIGSGSSAFFRPK------LGVSAPSIEVYVAGCCSGVPVILSKTIQMSPRR 54
           M+C  A  + GSG   F + K      L    P+IEVYV GC SG P+IL+KT+Q+  ++
Sbjct: 147 MNCE-AEVTAGSG---FLKEKSINGQELSSPLPTIEVYVTGCFSGTPIILTKTLQLGLKK 202

Query: 55  RVPRHFTLDAIPEDEEMMTEKENGVRNGLIPLPKLQITESEIDDDYDSDGKMGHVFYSQE 114
           +  R   LDAIPE E    +K+      L    +    + E +         G +++  E
Sbjct: 203 KQSRRMALDAIPEYETAEPQKDTSYALDLQATTEYGNYKEEYE---------GDMYWRSE 253

Query: 115 MYPGEDGQLTWFNAGVRVGVGIGLGMCVGIGIGVGLLMRSYQTTTRNFRRKFF 167
                DG+++WFNAGVRVGVGIGLG+CVG+GIGVGLL+R+YQ+TTR FRR+  
Sbjct: 254 CI---DGEMSWFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRTFRRRLL 303


>AT1G75180.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216772-28217911 REVERSE
           LENGTH=243
          Length = 243

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 6/64 (9%)

Query: 12  SGSSAFFRPK------LGVSAPSIEVYVAGCCSGVPVILSKTIQMSPRRRVPRHFTLDAI 65
           +  S F + K      L    P+IEVYV GC SG P+IL+KT+Q+  R++  R   LD+I
Sbjct: 161 TAESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSI 220

Query: 66  PEDE 69
           PE E
Sbjct: 221 PEYE 224