Miyakogusa Predicted Gene

Lj0g3v0109989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109989.1 Non Chatacterized Hit- tr|I1JI38|I1JI38_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52244
PE,70.3,0,seg,NULL; PRONE,Plant specific Rop nucleotide exchanger,
PRONE; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.6333.1
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleoti...   189   1e-48
AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotid...   183   7e-47
AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROP (rho of plants) ...   155   2e-38
AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotid...   154   4e-38
AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotid...   130   7e-31
AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotid...   129   9e-31
AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-...   127   4e-30
AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | RHO guanyl-nucleotid...   125   2e-29
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotid...   123   7e-29
AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO guanyl-...   121   3e-28
AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13, PIRF2 | RHO guanyl-...   119   1e-27
AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotid...   114   3e-26
AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4, RHS11 | RHO guanyl-nu...   112   2e-25
AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleot...   109   1e-24
AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleot...   102   1e-22

>AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleotide
           exchange factor 5 | chr5:1786028-1788363 FORWARD
           LENGTH=611
          Length = 611

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 104/138 (75%), Gaps = 1/138 (0%)

Query: 66  LGWPIRKAAVSKRGK-SDEKENEPVSHLEDAKITXXXXXXXXXXXXXERFAKLLLGEDMS 124
           LGWPIRKA+  K  K S   +++ ++  +D+                ERFAKLLLGEDMS
Sbjct: 61  LGWPIRKASFRKNSKESVNFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLLGEDMS 120

Query: 125 GSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMP 184
           GSGKGVCTALAISNAITNLCAT+FGQLWRLEPL  EKK MWRREMEW++ VSDHIVEL P
Sbjct: 121 GSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTP 180

Query: 185 SWQTFPDGSKLEVMTCRP 202
           S QT+PDG+K EVMTCRP
Sbjct: 181 STQTYPDGNKFEVMTCRP 198


>AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotide
           exchange factor 7 | chr5:383493-385698 FORWARD
           LENGTH=546
          Length = 546

 Score =  183 bits (464), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 80/91 (87%), Positives = 87/91 (95%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERF+KLLLGEDMSGSG GVCTALAISNAITNLCAT+FGQLWRLEPLP EKK MWRREMEW
Sbjct: 76  ERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRLEPLPTEKKEMWRREMEW 135

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+CVSDHIVE+ P+WQTFPDG+KLE+MTCRP
Sbjct: 136 LLCVSDHIVEMTPTWQTFPDGTKLEIMTCRP 166


>AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROP (rho of plants)
           guanine nucleotide exchange factor 6 |
           chr3:20649051-20651290 REVERSE LENGTH=579
          Length = 579

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/137 (56%), Positives = 95/137 (69%), Gaps = 2/137 (1%)

Query: 66  LGWPIRKAAVSKRGKSDEKENEPVSHLEDAKITXXXXXXXXXXXXXERFAKLLLGEDMSG 125
           LGWP+ +   S R  S + + +  + ++D                 ER AKLLLGEDMSG
Sbjct: 69  LGWPLGQG--SWRKSSGKMKKKTPTKIDDFGFKRVGTETSEIELLKERMAKLLLGEDMSG 126

Query: 126 SGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMPS 185
           SG+GVC ALAISNAITNL A + GQ WRLEP+P EKK MWRRE+E L+ VSDHIVEL+PS
Sbjct: 127 SGEGVCPALAISNAITNLYAAILGQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPS 186

Query: 186 WQTFPDGSKLEVMTCRP 202
           +Q FP+G+K+EVM CRP
Sbjct: 187 FQNFPNGNKIEVMNCRP 203


>AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotide
           exchange factor 1 | chr4:17986643-17988659 FORWARD
           LENGTH=548
          Length = 548

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSG GKGVCTALAISNAITNL ATVFG+LWRLEPL  +KKAMWRRE+EW
Sbjct: 96  ERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEW 155

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+CVSD IVEL+PS Q FP G   E+M  RP
Sbjct: 156 LLCVSDSIVELIPSIQQFPGGGTYEIMETRP 186


>AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide
           exchange factor 3 | chr4:211146-213094 REVERSE
           LENGTH=473
          Length = 473

 Score =  130 bits (326), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 72/91 (79%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSGSGKGVCTA+ ISNAITNL ATVFGQ  RLEPL  EK+A+W+REM  
Sbjct: 110 ERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKREMNC 169

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+ V D+IVE +P  Q   +G+ +EVM  RP
Sbjct: 170 LLSVCDYIVEFIPRCQNLSNGATVEVMESRP 200


>AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide
           exchange factor 3 | chr4:211731-213094 REVERSE
           LENGTH=337
          Length = 337

 Score =  129 bits (325), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 72/91 (79%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSGSGKGVCTA+ ISNAITNL ATVFGQ  RLEPL  EK+A+W+REM  
Sbjct: 110 ERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKREMNC 169

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+ V D+IVE +P  Q   +G+ +EVM  RP
Sbjct: 170 LLSVCDYIVEFIPRCQNLSNGATVEVMESRP 200


>AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO
           guanyl-nucleotide exchange factor 12 |
           chr1:30042172-30044092 REVERSE LENGTH=515
          Length = 515

 Score =  127 bits (320), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 73/90 (81%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERF+KLLLGED SG GKGV +ALA+SNAITNL A+VFG+  RLEP+P E++A WR+E++W
Sbjct: 98  ERFSKLLLGEDNSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRARWRKEIDW 157

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+D++VE  PS Q   DG+ +E+MT R
Sbjct: 158 LLSVTDYVVEFAPSQQKNKDGTNMEIMTTR 187


>AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | RHO guanyl-nucleotide
           exchange factor 2 | chr1:259495-261474 REVERSE
           LENGTH=485
          Length = 485

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 69/91 (75%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERF+KLLLGEDMSGSGKGVCTA+ ISNAITNL ATVFGQ  RLEPL  E+K  W+REM  
Sbjct: 122 ERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNC 181

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+ V D+I E +P  Q   +G+ +EVM  RP
Sbjct: 182 LLSVCDYIFEFIPKSQNLSNGATVEVMESRP 212


>AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide
           exchange factor 8 | chr3:8980695-8982793 REVERSE
           LENGTH=523
          Length = 523

 Score =  123 bits (309), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 73/90 (81%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           +RFAKLLLGEDMSG GKGV +ALA+SNAITNL A++FG+  +L+P+P +++A W++E++W
Sbjct: 91  DRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDW 150

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+DHIVE +PS QT  DG   E+M  R
Sbjct: 151 LLSVTDHIVEFVPSQQTSKDGVCTEIMVTR 180


>AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO
           guanyl-nucleotide exchange factor 11 |
           chr1:19455766-19459235 REVERSE LENGTH=607
          Length = 607

 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 54/90 (60%), Positives = 71/90 (78%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           E+F+KLLLGEDMSG GKGV +ALA+SNAITNL A+ FG+  RLEP+  ++K  WRRE+ W
Sbjct: 174 EKFSKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWRREIGW 233

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+D+IVE  P+ QT  DG+ +EVM+ R
Sbjct: 234 LISVADYIVEFAPTQQTNKDGTSMEVMSTR 263


>AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13, PIRF2 | RHO
           guanyl-nucleotide exchange factor 13 |
           chr3:5466246-5468512 FORWARD LENGTH=576
          Length = 576

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 70/90 (77%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ++FAKLLLGEDMSG  KGV +ALA+SNAITNL A+ FG++ RLE +  +KK  WRRE+ W
Sbjct: 134 DKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAISEDKKERWRREIGW 193

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+DHIVE  P+ QT  DGS +EVMT +
Sbjct: 194 LLSVTDHIVEFSPTHQTNEDGSSMEVMTTK 223


>AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotide
           exchange factor 9 | chr4:7680153-7682414 FORWARD
           LENGTH=517
          Length = 517

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 70/90 (77%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           +RF KLLLGEDMSG GKGV +ALA+SNAITNL A++FG+  +L+P+  +++A W++E++W
Sbjct: 80  DRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMAPDRRARWKKEIDW 139

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+DHIVE +PS Q   +G   E+M  R
Sbjct: 140 LLSVTDHIVEFVPSQQISKEGVCTEIMVTR 169


>AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4, RHS11 | RHO
           guanyl-nucleotide exchange factor 4 |
           chr2:18883540-18885440 FORWARD LENGTH=463
          Length = 463

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 11/107 (10%)

Query: 78  RGKSDEKENEPVSHLEDAKITXXXXXXXXXXXXXERFAKLLLGEDMSGSGKGVCTALAIS 137
            G  DE E+  +   EDA++              ERFAKLLLGEDMSGSGKGVCTA+ +S
Sbjct: 76  HGDGDE-EDSDIDSAEDAEL----------EMMRERFAKLLLGEDMSGSGKGVCTAVTVS 124

Query: 138 NAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMP 184
           N+ITNL ATVFGQ  RL+PL  EKK +W+REM   + + D+IVE++P
Sbjct: 125 NSITNLYATVFGQSLRLQPLSTEKKDLWKREMNCFMSICDYIVEVIP 171


>AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleotide
           exchange factor 14 | chr1:11326474-11329767 REVERSE
           LENGTH=576
          Length = 576

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 70/88 (79%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           E+F+KLLLGED++G  KGV  ALA+SNA+T+L  ++FG+LW+LEPL  EKK  WRREM+W
Sbjct: 142 EKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKWRREMDW 201

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMT 199
           L+  +++++EL+PS Q   +G  LE+MT
Sbjct: 202 LLSPTNYMIELVPSKQNDANGRSLEIMT 229


>AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleotide
           exchange factor 10 | chr5:6603291-6606130 FORWARD
           LENGTH=493
          Length = 493

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 63/90 (70%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSG G G  +ALA+SNAIT L  ++FG+  +L+P+  E K  WR+EM W
Sbjct: 50  ERFAKLLLGEDMSGGGTGETSALALSNAITKLADSMFGEQMKLQPMYPETKENWRKEMGW 109

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V DHIV+ +PS Q   +G   E+M  +
Sbjct: 110 LLSVIDHIVQFVPSRQMGKNGQFTEIMVTK 139