Miyakogusa Predicted Gene

Lj0g3v0109499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109499.1 tr|I3T8R8|I3T8R8_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=4
SV=1,97.78,3e-18,FKBP_PPIASE,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; FKBP_C,Peptidyl-prolyl cis-trans,CUFF.6291.1
         (45 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48570.1 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptid...    72   5e-14
AT3G25230.2 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 ...    70   3e-13
AT3G25230.1 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 ...    70   3e-13
AT5G48580.1 | Symbols: FKBP15-2 | FK506- and rapamycin-binding p...    47   2e-06
AT3G25220.1 | Symbols: FKBP15-1 | FK506-binding protein 15 kD-1 ...    47   3e-06

>AT5G48570.1 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type
          peptidyl-prolyl cis-trans isomerase family protein |
          chr5:19690746-19693656 REVERSE LENGTH=578
          Length = 578

 Score = 72.4 bits (176), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/37 (86%), Positives = 32/37 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E GDEV VHYTGTLLDGTKFDSSR RG PF FTLGQG
Sbjct: 63 ENGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQG 99


>AT3G25230.2 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 |
          chr3:9188257-9191175 FORWARD LENGTH=562
          Length = 562

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/37 (83%), Positives = 31/37 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E GDEV VHYTGTLLDGTKFDSSR R  PF FTLGQG
Sbjct: 55 ENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQG 91


>AT3G25230.1 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 |
          chr3:9188257-9191137 FORWARD LENGTH=551
          Length = 551

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/37 (83%), Positives = 31/37 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E GDEV VHYTGTLLDGTKFDSSR R  PF FTLGQG
Sbjct: 55 ENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQG 91


>AT5G48580.1 | Symbols: FKBP15-2 | FK506- and rapamycin-binding
          protein 15 kD-2 | chr5:19696156-19697304 REVERSE
          LENGTH=163
          Length = 163

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 25/38 (65%)

Query: 8  SEAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          +  GD + VHY G L DGT FDSS  RG PF+F LG G
Sbjct: 49 AHKGDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSG 86


>AT3G25220.1 | Symbols: FKBP15-1 | FK506-binding protein 15 kD-1 |
          chr3:9182691-9184463 FORWARD LENGTH=153
          Length = 153

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/38 (55%), Positives = 25/38 (65%)

Query: 8  SEAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          +  GD++ VHY G L DGT FDSS  RG P +F LG G
Sbjct: 49 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTG 86