Miyakogusa Predicted Gene

Lj0g3v0105139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105139.1 Non Chatacterized Hit- tr|I3T3W6|I3T3W6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Calycin; BCTLIPOCALIN,Lipocalin, bacterial; APOLIPOPROTEIN
D-RELATED,NULL; APOLIPOPRO,CUFF.5988.1
         (184 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58070.1 | Symbols: ATTIL, TIL | temperature-induced lipocali...   306   4e-84

>AT5G58070.1 | Symbols: ATTIL, TIL | temperature-induced lipocalin |
           chr5:23500512-23501156 REVERSE LENGTH=186
          Length = 186

 Score =  306 bits (785), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 142/182 (78%), Positives = 161/182 (88%), Gaps = 1/182 (0%)

Query: 4   KAMEVVRGLDLKRYMGRWYEIACFPSRFQPSDGMNTRATYTLNDDGTVHVLNETWSGGKR 63
           K MEVV+GL+++RYMGRWYEIA FPSRFQP +G++TRATYTLN DGT+HVLNETWS GKR
Sbjct: 5   KEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGKR 64

Query: 64  SFIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVLFIDHDYQYALIGQPSRRYL 123
            FIEGSAYKADP SDEAKLKVKFYVPPFLPIIPV GDYWVL+ID DYQ+ALIGQPSR YL
Sbjct: 65  GFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSYL 124

Query: 124 WILCRKPHLDEETYNELVQKATDEGYDVSKLHKTPQSDTPPEEE-GPQDTKGIWWIKSLF 182
           WIL R   ++EETY +LV+KA +EGYD+SKLHKTPQSDTPPE    P+D+KG+WW KSLF
Sbjct: 125 WILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSLF 184

Query: 183 GK 184
           GK
Sbjct: 185 GK 186