Miyakogusa Predicted Gene
- Lj0g3v0101829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101829.1 tr|G7JYR9|G7JYR9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,81.29,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.5739.1
(767 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 530 e-150
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 437 e-122
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 410 e-114
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 400 e-111
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 6e-97
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 8e-97
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 341 9e-94
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 9e-94
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 5e-91
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 6e-91
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 5e-90
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 324 1e-88
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 4e-88
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 318 7e-87
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 314 1e-85
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 2e-85
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 2e-85
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 313 2e-85
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 312 5e-85
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 311 8e-85
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 310 3e-84
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 309 6e-84
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 307 2e-83
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 306 4e-83
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 304 1e-82
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 2e-82
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 1e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 301 1e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 300 2e-81
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 300 3e-81
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 4e-81
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 298 8e-81
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 295 8e-80
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 9e-80
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 295 1e-79
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 4e-79
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 291 2e-78
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 2e-78
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 2e-78
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 289 7e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 7e-78
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 288 8e-78
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 286 4e-77
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 286 5e-77
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 1e-76
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 3e-76
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 283 4e-76
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 4e-75
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 5e-74
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 6e-74
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 271 2e-72
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 3e-72
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 4e-72
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 5e-72
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 5e-72
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 269 6e-72
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 266 4e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 266 6e-71
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 265 1e-70
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 3e-69
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 6e-69
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 2e-68
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 254 2e-67
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 2e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 7e-66
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 6e-65
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 9e-65
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 5e-64
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 241 2e-63
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 8e-63
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 3e-62
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 2e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 6e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 8e-60
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 8e-60
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 228 1e-59
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 6e-59
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 8e-59
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 224 1e-58
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 7e-58
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 2e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 8e-57
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 219 8e-57
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 3e-55
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 6e-55
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 4e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 4e-52
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 202 8e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 200 3e-51
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 4e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 7e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 8e-49
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 1e-45
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 6e-41
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 4e-40
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 3e-39
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 4e-39
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 2e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 6e-38
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 155 1e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 3e-37
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 5e-37
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 5e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 2e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 150 3e-36
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 4e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 7e-36
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 1e-35
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 147 2e-35
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 147 3e-35
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 3e-34
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 3e-34
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 3e-34
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 4e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 8e-33
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-32
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 2e-32
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 3e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 5e-30
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 129 8e-30
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-29
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 127 2e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 3e-28
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 124 4e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-28
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 4e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 1e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 120 3e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 9e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 1e-26
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 115 1e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 5e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 8e-24
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 108 1e-23
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 5e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 96 1e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 5e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 92 2e-18
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 7e-18
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 7e-18
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 8e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 85 2e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 4e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 8e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 78 3e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 77 5e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 3e-13
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 2e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 2e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 71 3e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 70 6e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 69 1e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 1e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 7e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 1e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 7e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 6e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 6e-06
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/623 (40%), Positives = 394/623 (63%), Gaps = 3/623 (0%)
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKD 191
W + I+ Y R G+ +A + + +P + S +N +I+GY + G+F A K+F+ MP +D
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMP-RWSSVSYNGMISGYLRNGEFELARKLFDEMPERD 125
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
LVS+N M+ GY +N +G A FE M E++V SWN M+SG+ +G + AR +F+++P
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
N VSW +L + ++ K+ EA LF S +VSWN ++ + + +I EA + F +
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 312 PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
+D VSW+TII GY + GK+DEAR+++++ P +D+ TA++SG IQ V+EA ++F+
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
++ R+ + WN+M+AG+ Q RM+ A +LF MP +N +WNTMI+GYAQ G++ A+N+
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F M +R+ VSW ++I G+ Q+ F+AL+ V M REG + ++S+F
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G QLH ++K GY FV NAL+ MY KCG +E A +F + D++SWN++I+GY
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
+ +G+ A + F+ M E + PD T + +LSACSH GL ++G F M +D+ + P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
++HY+C+VDLLGR G LE+A N+++ M + +A +WG+LLGA RVH N E+ E AA ++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
+EP N+ Y+ LSN++A +GRW +V +LRV MRDK K+PG SWIE+QN+ F D
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 732 SGRLRPETIQIILIGISADIRDK 754
PE +I D+R K
Sbjct: 666 E--FHPEKDEIFAFLEELDLRMK 686
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 251/431 (58%), Gaps = 38/431 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+ G+ EA+RVF + V+YN MIS + +NG+ AR+LFD+M +R+LVSWN MI G
Sbjct: 76 RTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKG 135
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---------- 157
Y+ N + +A +LF++MPERD SW M++ Y + G ++ AR + + +P+
Sbjct: 136 YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALL 195
Query: 158 -------KLESAC-------------WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNS 197
K+E AC WN ++ G+ KK + +A + F+ M V+D+VS+N+
Sbjct: 196 SAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNT 255
Query: 198 MLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSW 257
++ GY Q+GK+ A F++ ++V +W MVSG++ + + AR+LF+K+P N VSW
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV 317
ML G+ + ++ A+ LFD MPC+NV +WN MI YAQ +I EA LF K+P +D V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR- 376
SW+ +I GY + G EA ++ QM + + S + T A ++ QL R
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 377 -----DTICW--NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAE 429
+T C+ N+++ +C+ G ++EA DLF++M K+ VSWNTMI+GY++ G + A
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 430 NIFQAMEERNI 440
F++M+ +
Sbjct: 496 RFFESMKREGL 506
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 257/474 (54%), Gaps = 18/474 (3%)
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
K + ++ WN+ +S ++ +G + A ++F+++P ++VS+ M+ G+ R+G+ AR+L
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
FD MP +++VSWN MI Y ++ + +A +LF +P +D SW+T+++GY + G +D+AR
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
V+++MP K+ + AL+S +Q +++EA +F + WN ++ GF + ++ E
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
A F M ++ VSWNT+I+GYAQ+G++D A +F +++ +W ++++G++QN +
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+A + M + ++ ++ ++ +L + + ++ N +
Sbjct: 298 EEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTM 349
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I YA+CG++ A+ +F + D +SW ++I+GY+ +G++ EA + F QM E ++
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FN 633
+F LS C+ G L +V+ E + L+ + + G +EEA F
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 634 VVRGMDVKANAGLWGSLLGACRVHKNLEIGE--FAAMRLSELEPHNASNYITLS 685
+ G D+ + W +++ H E+ F +M+ L+P +A+ LS
Sbjct: 469 EMAGKDIVS----WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 155/311 (49%), Gaps = 46/311 (14%)
Query: 296 AQDLQIDEA-VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
A QI ++ K +K D W+ I+ Y+R G+ +EA V+ +MP + ++
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI 102
Query: 355 SGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT 414
SG ++ G + A K+F+++ RD + WN MI G+ ++ + +A +LF MP+++ SWNT
Sbjct: 103 SGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNT 162
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
M+SGYAQ G +D A ++F M E+N VSWN+L++ ++QNS +A ++ RE
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC--MLFKSRE----- 215
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS-NALIAMYAKCGRVESAEQVF 533
N VS N L+ + K ++ A Q F
Sbjct: 216 ---------------------------------NWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
++ D++SWN++I+GYA +G EA +Q+ E V D T+ M+S +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 594 QGLDLFKCMVE 604
+ +LF M E
Sbjct: 299 EARELFDKMPE 309
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 182/351 (51%), Gaps = 21/351 (5%)
Query: 30 SIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQL 89
S+ + V + N I + GK++EA ++F + +++ T+ +M+S + +N + +AR+L
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 90 FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
FDKM +RN VSWN M+AGY+ +E A +LFDVMP R+ +W MIT Y + GK+ +A+
Sbjct: 304 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 363
Query: 150 ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
L + +P K + W ++IAGY++ G +A ++F M + + S++S L+
Sbjct: 364 NLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 206 GKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+ L ++ E N ++ + G + A LF+++ + VSW TM+
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 262 CGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV 317
G++RHG A R F+SM + + + A+++A + +D+ + F + GV
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 318 -----SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
++ +++ R G L++A + MP + A+ L+ RV
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGASRV 590
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 350/564 (62%), Gaps = 1/564 (0%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N I ++ G+ +A K+F+ K + S+NSM+AGY N A F++M ++N++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
SWN +VSG++ +G++ AR++F+ +P N VSW ++ G+ +GK+ A LF MP KN
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
VSW M+ + QD +ID+A KL+ +P KD ++ +++I+G + G++DEARE++++M
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+ + T +++G Q RVD+A K+F+ + + + W SM+ G+ Q+GR+++A +LF M
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
P K ++ N MISG Q G++ A +F +M+ERN SW ++I +N +AL +
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
LM ++G +P T G Q+H +++ + D++V++ L+ MY KCG
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM-LSEEVVPDQVTFIGML 583
+ ++ +F D+I WNS+ISGYA +G EA K F +M LS P++VTF+ L
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SACS+AG+ +GL +++ M F ++P+ HY+C+VD+LGR GR EA ++ M V+ +
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
A +WGSLLGACR H L++ EF A +L E+EP N+ YI LSNM+A GRW +V LR L
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCF 727
M+ + K PGCSW EV+N++ F
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAF 584
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 249/441 (56%), Gaps = 45/441 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N +I HL ++GK+ EA ++F + K++ ++NSM++ + N DAR+LFD+M RN++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
SWN +++GY+ N ++EA K+FD+MPER+ SW ++ Y GK++ A L +P+K
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK- 139
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
W ++ G+ + G+ DA K++ ++P KD ++ SM+ G + G++ A F++M+
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
E++V++W MV+G+ + + AR++F+ +P VSW +ML G+ ++G+I +A LF+
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG--------- 330
MP K V++ NAMI+ Q +I +A ++F + ++ SW T+I + R G
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 331 --------------------------KLDEAREVYNQM-PCK---DIAAETALMSGLIQT 360
L ++V+ Q+ C+ D+ + LM+ I+
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTM 415
G + ++ +F++ ++D I WNS+I+G+ G +EAL +F +MP K N V++
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 416 ISGYAQAGQMDSAENIFQAME 436
+S + AG ++ I+++ME
Sbjct: 440 LSACSYAGMVEEGLKIYESME 460
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 268/504 (53%), Gaps = 16/504 (3%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R +S TI T N I+ ++ GKI +AR+LFD +++ SWN+M+AGY N M +
Sbjct: 9 RTYSTTIPPP--TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
A KLFD MP+R+ SW +++ Y + G++++AR++ +L+P++ W +++ GY G+
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER-NVVSWTALVKGYVHNGK 125
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS 236
AE +F MP K+ VS+ ML G+ Q+G++ A +E + +K+ ++ M+ G
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
G + AR++F+++ + ++W TM+ G+ ++ ++ +AR++FD MP K VSW +M+ Y
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV 245
Query: 297 QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
Q+ +I++A +LF +P K ++ + +I+G + G++ +AR V++ M ++ A+ ++
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 357 LIQTGRVDEASKMF---NQLSTRDTICWNSMIAGFCQS------GRMDEALDLFRQMPKK 407
+ G EA +F + R T I C S G+ A L R
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA-QLVRCQFDV 364
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+ + +++ Y + G++ ++ IF ++I+ WNS+I+G+ + L +ALK M
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 468 REGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA-LIAMYAKCGR 525
G KP++ TF + G +++E + + + A ++ M + GR
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 526 VESAEQVFTAIEC-VDLISWNSLI 548
A ++ ++ D W SL+
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLL 508
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 230/428 (53%), Gaps = 38/428 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G+++EA +VF +N+V++ +++ + NGK+ A LF KM ++N VSW M+ G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV 167
+L + +++A KL++++P++DN + MI ++G++++ARE+ + + ++ W ++
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER-SVITWTTM 209
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
+ GY + + DA K+F++MP K VS+ SML GY QNG++ A FE M K V++ N
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF---------D 278
M+SG G+++ AR++F+ + N SW T++ R+G EA LF
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 279 SMP--------CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG 330
+ P C ++ S + +AQ ++ V +++ S ++ YI+ G
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA---------SVLMTMYIKCG 380
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----STR-DTICWNSMI 385
+L +++ ++++ P KDI +++SG G +EA K+F ++ ST+ + + + + +
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 386 AGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMISGYAQAGQMDSAENIFQAME-ERN 439
+ +G ++E L ++ M K + + M+ +AG+ + A + +M E +
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 440 IVSWNSLI 447
W SL+
Sbjct: 501 AAVWGSLL 508
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 182/349 (52%), Gaps = 21/349 (6%)
Query: 31 IGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLF 90
I K + I L K G+V+EA +F ++++T+ +M++ + +N ++ DAR++F
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 91 DKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARE 150
D M ++ VSW +M+ GY+ N +E+A +LF+VMP + + MI+ +KG++ KAR
Sbjct: 227 DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARR 286
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM-------PVKDLVSYNSMLAGYT 203
+ + + ++ A W +VI + + G +A +F LM L+S S+ A
Sbjct: 287 VFDSMKER-NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 204 --QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+GK A + +V +++++ ++ G+L ++ +F++ P+ + + W +++
Sbjct: 346 SLHHGKQVHA-QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 262 CGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG 316
G+A HG EA ++F MP N V++ A ++A + ++E +K++ + G
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFG 464
Query: 317 VS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
V ++ +++ R G+ +EA E+ + M + AA + G +T
Sbjct: 465 VKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/578 (36%), Positives = 343/578 (59%), Gaps = 1/578 (0%)
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
I+ ++ G+ ++A K F+ + K + S+NS+++GY NG A F++M+E+NVVSWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+VSG++ + + AR +FE +P N VSW M+ G+ + G + EA LF MP +N VS
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
W M D +ID+A KL+ +P KD V+ + +I G R G++DEAR ++++M +++
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
T +++G Q RVD A K+F + + + W SM+ G+ SGR+++A + F MP K
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
++ N MI G+ + G++ A +F ME+R+ +W +I + + +AL M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
++G +P + Q G Q+H ++++ + +D++V++ L+ MY KCG +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
A+ VF D+I WNS+ISGYA +G EA K F +M S +P++VT I +L+ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLW 647
+AG +GL++F+ M F + P EHYSC VD+LGR G++++A ++ M +K +A +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
G+LLGAC+ H L++ E AA +L E EP NA Y+ LS+++A +W +V +R MR
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 708 RAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILI 745
K PGCSWIEV ++ F + + PE I+++
Sbjct: 564 NVSKFPGCSWIEVGKKVHMF-TRGGIKNHPEQAMILMM 600
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 250/448 (55%), Gaps = 44/448 (9%)
Query: 38 NKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
N + +I L ++GK+ EA + F + K + ++NS++S + NG +ARQLFD+MS+RN
Sbjct: 19 NCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN 78
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD 157
+VSWN +++GY+ N M+ EA +F++MPER+ SW M+ Y ++G + +A L +P+
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
+ E + W + G G+ A K++++MPVKD+V+ +M+ G + G++ A F++
Sbjct: 139 RNEVS-WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF 277
M E+NVV+W M++G+ + + AR+LFE +P VSW +ML G+ G+I +A F
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEARE 337
+ MP K V++ NAMI + + +I +A ++F + +D +W +I Y R G EA +
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 338 VYNQMP------------------------------------CK---DIAAETALMSGLI 358
++ QM C+ D+ + LM+ +
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV 377
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNT 414
+ G + +A +F++ S++D I WNS+I+G+ G +EAL +F +MP N V+
Sbjct: 378 KCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIA 437
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVS 442
+++ + AG+++ IF++ME + V+
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVT 465
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 194/386 (50%), Gaps = 43/386 (11%)
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
V+ + +S G ++ AR+ F+ + SW +++ G+ +G EAR+LFD M +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
NVVSWN +++ Y ++ I EA +F +P ++ VSW+ ++ GY++ G + EA ++ +MP
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ + T + GLI GR+D+A K+++ + +D + +MI G C+ GR+DEA +F +
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
M ++N V+W TMI+GY Q ++D A +F+ M E+ VSW S++ G+ + DA +
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
+M KP + NA+I + +
Sbjct: 258 EVM---PMKP------------------------------------VIACNAMIVGFGEV 278
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + A +VF +E D +W +I Y G+ +EA F QM + V P + I +L
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 584 SACSHAGLANQGLD----LFKCMVED 605
S C+ G L +C +D
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDD 364
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 180/352 (51%), Gaps = 21/352 (5%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
K V I L + G+V+EA +F +N+VT+ +MI+ + +N ++ AR+LF+ M
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
++ VSW +M+ GY + +E+A + F+VMP + + MI + G++ KAR + +
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 289
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM-------PVKDLVSYNSMLAGYT--Q 204
L+ D+ ++A W +I Y +KG +A +F M L+S S+ A Q
Sbjct: 290 LMEDR-DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
G+ A H + +V +++++ +V G+L A+ +F++ + + + W +++ G+
Sbjct: 349 YGRQVHA-HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 265 ARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-- 318
A HG EA ++F MP N V+ A++ A + +++E +++F + K V+
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 319 ---WSTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEA 366
+S ++ R G++D+A E+ M K D AL+ R+D A
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 342/556 (61%), Gaps = 4/556 (0%)
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-PNAVSWVTMLCGF 264
GK+ A F+ + E++VV+W +++G++ GD+ AR+LF+++ + N V+W M+ G+
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
R +++ A LF MP +NVVSWN MI YAQ +ID+A++LF ++P ++ VSW++++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
++ G++DEA ++ +MP +D+ + TA++ GL + G+VDEA ++F+ + R+ I WN+M
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
I G+ Q+ R+DEA LF+ MP+++ SWNTMI+G+ + +M+ A +F M E+N++SW
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
++ITG+++N +AL M R+G KP+ T+ G Q+H+ I K
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIECV-DLISWNSLISGYALNGYAIEAF 561
S + + V++AL+ MY+K G + +A ++F + C DLISWNS+I+ YA +G+ EA
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+ + QM P VT++ +L ACSHAGL +G++ FK +V D ++ EHY+CLVDL
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY 681
GR GRL++ N + D + + +G++L AC VH + I + ++ E +A Y
Sbjct: 480 CGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTY 539
Query: 682 ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQ 741
+ +SN++A G+ EE +R+ M++K K PGCSW++V Q F+ D + E +
Sbjct: 540 VLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALD 599
Query: 742 IILIGISADIRDKFNV 757
IL + +R NV
Sbjct: 600 SILSDLRNKMRKNKNV 615
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 234/378 (61%), Gaps = 15/378 (3%)
Query: 114 VEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAK 173
+ EA KLFD +PERD +W +IT Y + G + +AREL + V + W ++++GY +
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
Q S AE +F MP +++VS+N+M+ GY Q+G++ AL F++M E+N+VSWN MV
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL 181
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
V G + A LFE++P + VSW M+ G A++GK+ EARRLFD MP +N++SWNAMI
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
YAQ+ +IDEA +LF +P +D SW+T+I G+IR ++++A ++++MP K++ + T +
Sbjct: 242 GYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTM 301
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWN-----------SMIAGFCQSGRMDEALDLFR 402
++G ++ +EA +F+++ ++ N S +AG + ++ + + +
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLIS--K 359
Query: 403 QMPKKNSVSWNTMISGYAQAGQMDSAENIFQ--AMEERNIVSWNSLITGFLQNSLYFDAL 460
+ +KN + + +++ Y+++G++ +A +F + +R+++SWNS+I + + +A+
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 461 KSLVLMGREGKKPDQSTF 478
+ M + G KP T+
Sbjct: 420 EMYNQMRKHGFKPSAVTY 437
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 241/410 (58%), Gaps = 19/410 (4%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-SQRNLVSW 101
I L K+GK+ EA ++F +++VT+ +I+ + K G + +AR+LFD++ S++N+V+W
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLES 161
M++GYL + + A LF MPER+ SW MI Y + G+++KA EL + +P++
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-NI 171
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
WNS++ ++G+ +A +F MP +D+VS+ +M+ G +NGK+ A F+ M E+
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
N++SWN M++G+ + + A QLF+ +P + SW TM+ GF R+ ++ +A LFD MP
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAR 336
KNV+SW MI Y ++ + +EA+ +F K+ V ++ +I++ + L E +
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 337 EVYNQMPCKDIAAE-----TALMSGLIQTGRVDEASKMFNQ--LSTRDTICWNSMIAGFC 389
+++ Q+ K + + +AL++ ++G + A KMF+ + RD I WNSMIA +
Sbjct: 352 QIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 390 QSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
G EA++++ QM K ++V++ ++ + AG ++ F+ +
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 172/286 (60%), Gaps = 12/286 (4%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
++V + N I + G++++A+ +F +N+V++NSM+ + G+I +A LF++M
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
+R++VSW M+ G N V+EA +LFD MPER+ SW MIT Y + ++++A +L +
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
++P++ + A WN++I G+ + + + A +F+ MP K+++S+ +M+ GY +N + AL+
Sbjct: 258 VMPER-DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 214 FFEKM-----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
F KM + NV ++ ++S + L +Q+ + I N + +L +
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 265 ARHGKITEARRLFDS-MPC-KNVVSWNAMIAAYAQDLQIDEAVKLF 308
++ G++ AR++FD+ + C ++++SWN+MIA YA EA++++
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 209/401 (52%), Gaps = 31/401 (7%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
+++ + N + L + G+++EA+ +F +++V++ +M+ AKNGK+ +AR+LFD M
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
+RN++SWN MI GY N+ ++EA +LF VMPERD SW MIT + R ++ KA L +
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLV-SYNSMLAGYTQNGKM 208
+P+K W ++I GY + + +A VF+ M VK V +Y S+L+ + +
Sbjct: 289 RMPEK-NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 209 --GLALH--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK--IPNPNAVSWVTMLC 262
G +H + + +KN + + +++ + SG+L +AR++F+ + + +SW +M+
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 263 GFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS 318
+A HG EA +++ M + V++ ++ A + +++ ++ F L + +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 319 -----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV-------DEA 366
++ +++ R G+L ++V N + C D + ++ V E
Sbjct: 468 LREEHYTCLVDLCGRAGRL---KDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
K + + D + M + +G+ +EA ++ +M +K
Sbjct: 525 VKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 348/603 (57%), Gaps = 57/603 (9%)
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
+ G ++A +F + ++ V++N+M++GY + +M A F+ M +++VV+WN M+SG
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 233 FVNSGD---LSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
+V+ G L AR+LF+++P+ ++ SW TM+ G+A++ +I EA LF+ MP +N VSW+
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPHKDG--------------------------------- 316
AMI + Q+ ++D AV LF K+P KD
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 317 ----VSWSTIINGYIRVGKLDEAREVYNQMP---------------CKDIAAETALMSGL 357
+++T+I GY + G+++ AR +++Q+P CK++ + +++
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 358 IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMIS 417
++ G V A +F+Q+ RDTI WN+MI G+ RM++A LF +MP +++ SWN M+S
Sbjct: 292 LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS 351
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
GYA G ++ A + F+ E++ VSWNS+I + +N Y +A+ + M EG+KPD T
Sbjct: 352 GYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
++G Q+H+ ++K+ I D+ V NALI MY++CG + + ++F ++
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 538 CV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
++I+WN++I GYA +G A EA F M S + P +TF+ +L+AC+HAGL ++
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
F M+ + IEP EHYS LV++ G+ EEA ++ M + + +WG+LL ACR+
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
+ N+ + AA +S LEP +++ Y+ L NM+A+ G W+E ++R+ M KR K G S
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Query: 717 WIE 719
W++
Sbjct: 651 WVD 653
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/643 (27%), Positives = 311/643 (48%), Gaps = 117/643 (18%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N ++ ++G I++AR +F+K+ RN V+WNTMI+GY+ + +A KLFDVMP+RD
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 131 SWALMITCYTRKGK---LEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
+W MI+ Y G LE+AR+L + +P + +S WN++I+GYAK + +A +F M
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSR-DSFSWNTMISGYAKNRRIGEALLLFEKM 162
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
P ++ VS+++M+ G+ QNG++ A+ F KM K+ +V+G + + LS A +
Sbjct: 163 PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 248 KIPNPNA------VSWVTMLCGFARHGKITEARRLFDSMP---------------CKNVV 286
+ + + ++ T++ G+ + G++ AR LFD +P CKNVV
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
SWN+MI AY + + A LF ++ +D +SW+T+I+GY+ V ++++A ++++MP +D
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM-- 404
+ ++SG G V+ A F + + T+ WNS+IA + ++ EA+DLF +M
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 405 ----PKKNSVS--------------------------------WNTMISGYAQAGQMDSA 428
P ++++ N +I+ Y++ G++ +
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES 462
Query: 429 ENIFQAME-ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
IF M+ +R +++WN++I G+ + +AL M G P TF
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF--------- 513
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS---- 543
+ V NA A G V+ A+ F ++ V I
Sbjct: 514 ----------------------VSVLNAC----AHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 544 -WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC---SHAGLANQGLDLF 599
++SL++ + G EA M E PD+ + +L AC ++ GLA+ +
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMPFE---PDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 600 KCMVEDFAIEPLAE-HYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
+EP + Y L ++ MG +EA V M+ K
Sbjct: 605 S------RLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 641
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 241/464 (51%), Gaps = 64/464 (13%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N+++ + + G + EA +F +N VT+N+MIS + K +++ AR+LFD M +R++V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 100 SWNTMIAGYLHNS---MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP 156
+WNTMI+GY+ +EEA KLFD MP RD+FSW MI+ Y + ++ +A L E +P
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKD------------------------- 191
++ + W+++I G+ + G+ A +F MPVKD
Sbjct: 164 ER-NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 192 ----LVS--------YNSMLAGYTQNGKMGLALHFFEKMAE---------------KNVV 224
LVS YN+++ GY Q G++ A F+++ + KNVV
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
SWN M+ ++ GD+ SAR LF+++ + + +SW TM+ G+ ++ +A LF MP ++
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
SWN M++ YA ++ A F K P K VSW++II Y + EA +++ +M
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 345 K----DIAAETALMS---GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ D T+L+S GL+ + ++ + D N++I + + G + E+
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES 462
Query: 398 LDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+F +M K+ ++WN MI GYA G A N+F +M+ I
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Score = 209 bits (531), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 232/428 (54%), Gaps = 40/428 (9%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+ G + +EEA ++F ++ ++N+MIS +AKN +I +A LF+KM +RN VSW+
Sbjct: 113 VSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL----ELVPDKL 159
MI G+ N V+ A LF MP +D+ ++ + +L +A +L LV +
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 160 ESA-CWNSVIAGYAKKGQFSDAEKVFNLMP---------------VKDLVSYNSMLAGYT 203
+ +N++I GY ++GQ A +F+ +P K++VS+NSM+ Y
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYL 292
Query: 204 QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
+ G + A F++M +++ +SWN M+ G+V+ + A LF ++PN +A SW M+ G
Sbjct: 293 KVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSG 352
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL--------PH-- 313
+A G + AR F+ P K+ VSWN++IAAY ++ EAV LFI++ PH
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 314 KDGVSWST-IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ 372
+S ST ++N +R+G + ++ + D+ AL++ + G + E+ ++F++
Sbjct: 413 TSLLSASTGLVN--LRLGM--QMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDE 468
Query: 373 LS-TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDS 427
+ R+ I WN+MI G+ G EAL+LF M + +++ ++++ A AG +D
Sbjct: 469 MKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDE 528
Query: 428 AENIFQAM 435
A+ F +M
Sbjct: 529 AKAQFVSM 536
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 206/440 (46%), Gaps = 66/440 (15%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNT---------------IHKNLVTYNSMISVFAKN 80
V+ N I+ G+ G+VE A +F KN+V++NSMI + K
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 81 GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYT 140
G + AR LFD+M R+ +SWNTMI GY+H S +E+A LF MP RD SW +M++ Y
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYA 354
Query: 141 RKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYN 196
G +E AR E P+K + WNS+IA Y K + +A +F M ++ D +
Sbjct: 355 SVGNVELARHYFEKTPEK-HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 197 SMLAGYTQ--NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA 254
S+L+ T N ++G+ +H ++ K V+ +P NA
Sbjct: 414 SLLSASTGLVNLRLGMQMH---QIVVKTVIP----------------------DVPVHNA 448
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKN-VVSWNAMIAAYAQDLQIDEAVKLFIKLP- 312
+ +TM ++R G+I E+RR+FD M K V++WNAMI YA EA+ LF +
Sbjct: 449 L--ITM---YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 313 ---HKDGVSWSTIINGYIRVGKLDEAR-EVYNQMPCKDIAAETALMSGLIQT----GRVD 364
+ +++ +++N G +DEA+ + + M I + S L+ G+ +
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
Query: 365 EASKMFNQLSTR-DTICWNSMIAG---FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
EA + + D W +++ + G A + ++ ++S + + + YA
Sbjct: 564 EAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYA 623
Query: 421 QAGQMDSAENIFQAMEERNI 440
G D A + ME + I
Sbjct: 624 DMGLWDEASQVRMNMESKRI 643
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 69/388 (17%)
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN 413
++ +I++G + EA +F +L R+T+ WN+MI+G+ + M++A LF MPK++ V+WN
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 414 TMISGYAQAG-------------QMDSAEN---------------------IFQAMEERN 439
TMISGY G +M S ++ +F+ M ERN
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF-XXXXXXXXXXXXXQVGNQLH 498
VSW+++ITGF QN + S V++ R+ D S + L
Sbjct: 167 AVSWSAMITGFCQNG----EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 499 EY-ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE---------------CVDLI 542
+Y L SG + ++ N LI Y + G+VE+A +F I C +++
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SWNS+I Y G + A F QM D +++ M+ H LF M
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE- 661
A ++ +V +G +E A + K W S++ A +K+ +
Sbjct: 339 PNRD-----AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-WNSIIAAYEKNKDYKE 392
Query: 662 -IGEFAAMRL--SELEPHNASNYITLSN 686
+ F M + + +PH ++ ++ S
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 20/356 (5%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
K+V + N I K+G V A +F ++ +++N+MI + ++ DA LF +M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
R+ SWN M++GY VE A F+ PE+ SW +I Y + ++A +L
Sbjct: 339 PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 154 LV------PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
+ PD S G ++ + D+ +N+++ Y++ G+
Sbjct: 399 RMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGE 458
Query: 208 MGLALHFFEKMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLC 262
+ + F++M ++ V++WN M+ G+ G+ S A LF + + P+ +++V++L
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 263 GFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-HKDG 316
A G + EA+ F SM + +++++ + Q +EA+ + +P D
Sbjct: 519 ACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDK 578
Query: 317 VSWSTIING---YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKM 369
W +++ Y VG A E +++ + L + G DEAS++
Sbjct: 579 TVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQV 634
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/690 (34%), Positives = 384/690 (55%), Gaps = 32/690 (4%)
Query: 81 GKISDARQLFDKMSQRN----LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMI 136
G + AR L DK+ QR +V W ++++ Y ++EA LF+VMPER+ + M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 137 TCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
T Y + ++ +A L +P + S W ++ G+ DA ++F+ MP +++VS+N
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVVS--WTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS 256
+++ G +NG M A F+ M ++VVSWN M+ G++ + + A+ LF + N V+
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVT 233
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-D 315
W +M+ G+ R+G + EA RLF MP +N+VSW AMI+ +A + EA+ LF+++ D
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVD 293
Query: 316 GVS--WSTIINGYIRVGKLD-EAREVYNQMPCKDIAA--ETALMSGLI---------QTG 361
VS T+I+ G L E R + Q+ + I+ ET G + +G
Sbjct: 294 AVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-KNSVSWNTMISGYA 420
+ A + N+ + D N +I + ++G ++ A LF ++ + VSW +MI GY
Sbjct: 354 LIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYL 411
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXX 480
+AG + A +FQ + +++ V+W +I+G +QN L+ +A L M R G KP ST+
Sbjct: 412 EAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 471
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
G +H I K+ Y DL + N+L++MYAKCG +E A ++F +
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D +SWNS+I G + +G A +A FK+ML P+ VTF+G+LSACSH+GL +GL+L
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH- 657
FK M E ++I+P +HY ++DLLGR G+L+EA + + + ++G+LLG C ++
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNW 651
Query: 658 --KNLE-IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
K+ E I E AAMRL EL+P NA ++ L N++A GR + + +R M K K PG
Sbjct: 652 RDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPG 711
Query: 715 CSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
CSW+ V + FLS D + E Q++L
Sbjct: 712 CSWVVVNGRANVFLSGD--KSASEAAQMVL 739
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/635 (25%), Positives = 297/635 (46%), Gaps = 74/635 (11%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K G ++EA +F +N+VT N+M++ + K ++++A LF +M +N+VSW M+
Sbjct: 88 AKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLT 146
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNS 166
+ E+A +LFD MPER+ SW ++T R G +EKA+++ + +P + + WN+
Sbjct: 147 ALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR-DVVSWNA 205
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+I GY + +A+ +F M K++V++ SM+ GY + G + A F +M E+N+VSW
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSW 265
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP------NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
M+SGF + A LF ++ +PN + +++ +A G E RRL + +
Sbjct: 266 TAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL--AYACGGLGVEFRRLGEQL 323
Query: 281 PCKNVVS-W----------NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRV 329
+ + + W +++ YA I A L + D S + IIN Y++
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKN 381
Query: 330 GKLDEAREVYNQMPC-KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
G L+ A ++ ++ D + T+++ G ++ G V A +F +L +D + W MI+G
Sbjct: 382 GDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGL 441
Query: 389 CQSGRMDEALDLFRQM------PKKNSVS------------------------------- 411
Q+ EA L M P ++ S
Sbjct: 442 VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDP 501
Query: 412 ----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
N+++S YA+ G ++ A IF M +++ VSWNS+I G + L AL M
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN---DLFVSNALIAMYAKCG 524
GKKP+ TF G +L + + ++ I D ++S +I + + G
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS--MIDLLGRAG 619
Query: 525 RVESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
+++ AE+ +A+ D + +L+ LN +A ++ + D V G +
Sbjct: 620 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Query: 584 SACS-HAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
+ C+ +AGL D+ K M ++ I+ + + C
Sbjct: 680 ALCNVYAGLGRH--DMEKEMRKEMGIKGVKKTPGC 712
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 248/522 (47%), Gaps = 73/522 (13%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+K M T+ K+V + + L G+ E+AV +F +N+V++N++++
Sbjct: 119 VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTG 178
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMI 136
+NG + A+Q+FD M R++VSWN MI GY+ N +EEA LF M E++ +W M+
Sbjct: 179 LIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV 238
Query: 137 TCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSY 195
Y R G + +A L +P++ W ++I+G+A + +A +F M D VS
Sbjct: 239 YGYCRYGDVREAYRLFCEMPER-NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSP 297
Query: 196 N--SMLAGYTQNGKMGLALHFFEKMAEKNVVS--W------------------------- 226
N ++++ G +G+ + V+S W
Sbjct: 298 NGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 227 --------------NLMVSGFVNSGDLSSARQLFEKIPN-PNAVSWVTMLCGFARHGKIT 271
N++++ ++ +GDL A LFE++ + + VSW +M+ G+ G ++
Sbjct: 358 AQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF---IKLPHKD-GVSWSTIINGYI 327
A LF + K+ V+W MI+ Q+ EA L ++ K ++S +++
Sbjct: 418 RAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 328 RVGKLDEAREVY----NQMPC--KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
LD+ + ++ C D+ + +L+S + G +++A ++F ++ +DT+ W
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSW 537
Query: 382 NSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
NSMI G G D+AL+LF++M K NSV++ ++S + +G + +F+AM+E
Sbjct: 538 NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLV-LMGREGKKPDQSTF 478
T +Q + D S++ L+GR GK + F
Sbjct: 598 ----------TYSIQPGI--DHYISMIDLLGRAGKLKEAEEF 627
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/636 (34%), Positives = 347/636 (54%), Gaps = 45/636 (7%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
+I Y++ G LE R++ + +P + WNSV+ G K G +A+ +F MP +D +
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQR-NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIP 250
+NSM++G+ Q+ + AL +F M ++ V S+ ++S D++ Q+ I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 251 NPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
+S V ++ +++ G + +A+R+FD M +NVVSWN++I + Q+ EA+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 307 LFIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR 362
+F + D V+ +++I+ + + +EV+ GR
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH---------------------GR 278
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQA 422
V + K+ N D I N+ + + + R+ EA +F MP +N ++ +MISGYA A
Sbjct: 279 VVKNDKLRN-----DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
+A +F M ERN+VSWN+LI G+ QN +AL L+ RE P +F
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYI------NDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+G Q H ++LK G+ +D+FV N+LI MY KCG VE VF +
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
D +SWN++I G+A NGY EA + F++ML PD +T IG+LSAC HAG +G
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
F M DF + PL +HY+C+VDLLGR G LEEA +++ M ++ ++ +WGSLL AC+V
Sbjct: 514 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 573
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
H+N+ +G++ A +L E+EP N+ Y+ LSNM+AE G+WE+V +R MR + K PGCS
Sbjct: 574 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Query: 717 WIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
WI++Q F+ D R + I +L + A++R
Sbjct: 634 WIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 224/477 (46%), Gaps = 65/477 (13%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I S +F +N+ I K G +E+ +VF +N+ T+NS+++ K G +
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCY 139
+A LF M +R+ +WN+M++G+ + EEA F +M + + +S+A +++
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 140 TRKGKLEKARELLELV---PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
+ + K ++ L+ P + ++++ Y+K G +DA++VF+ M +++VS+N
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEK----------------------------------- 221
S++ + QNG AL F+ M E
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 222 -----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+++ N V + + AR +F+ +P N ++ +M+ G+A AR +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKL 332
F M +NVVSWNA+IA Y Q+ + +EA+ LF L + S++ I+ + +L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 333 DEAREVYNQM----------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
+ + + DI +L+ ++ G V+E +F ++ RD + WN
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 383 SMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+MI GF Q+G +EAL+LFR+M K + ++ ++S AG ++ + F +M
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+I + L+ + G +++ ++F+++ R+ WNS++ G + G +DEA LFR MP
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+++ +WN+M+SG+AQ + + +AL +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCE-------------------------------EALCYFAM 142
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M +EG ++ +F G Q+H I KS +++D+++ +AL+ MY+KCG
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
V A++VF + +++SWNSLI+ + NG A+EA F+ ML V PD+VT ++SA
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
C+ G ++ +V++ + + VD+ + R++EA + M ++
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 142/303 (46%), Gaps = 31/303 (10%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+G+ V ++ + +++ N+ + ++AK +I +AR +FD M RN+++ +MI+G
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC---- 163
Y + + A +F M ER+ SW +I YT+ G+ E+A L L+ K ES C
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL--KRESVCPTHY 387
Query: 164 -WNSVIAGYAKKGQFSDAEKV----------FNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ +++ A + + F D+ NS++ Y + G +
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHG 268
F KM E++ VSWN M+ GF +G + A +LF ++ P+ ++ + +L G
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Query: 269 KITEARRLFDSM-------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWS 320
+ E R F SM P ++ + M+ + ++EA + ++P D V W
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 321 TII 323
+++
Sbjct: 566 SLL 568
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 39/189 (20%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT---------------------- 534
+H ++KSG+ N++F+ N LI Y+KCG +E QVF
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 535 ---------AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
++ D +WNS++SG+A + EA F M E V ++ +F +LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEP-LAEHY--SCLVDLLGRMGRLEEAFNVVRGMDVKA 642
CS N+G+ + + A P L++ Y S LVD+ + G + +A V M +
Sbjct: 162 CSGLNDMNKGVQVHSLI----AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR- 216
Query: 643 NAGLWGSLL 651
N W SL+
Sbjct: 217 NVVSWNSLI 225
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+KH S +F N I K G VEE VF + ++ V++N+MI FA+NG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYL----HNSMVEEA-------SKLFDVMPERDNF 130
++A +LF +M + + + G L H VEE ++ F V P RD++
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG 170
+ M+ R G LE+A+ ++E +P + +S W S++A
Sbjct: 533 T--CMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/475 (37%), Positives = 307/475 (64%), Gaps = 4/475 (0%)
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL-QIDEAVKLFIKLPHKDGVSWSTIIN 324
R G I A R+F M KN ++WN+++ ++D ++ EA +LF ++P D S++ +++
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLS 132
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
Y+R ++A+ +++MP KD A+ +++G + G +++A ++F + ++ + WN+M
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME-ERNIVSW 443
I+G+ + G +++A F+ P + V+W MI+GY +A +++ AE +F+ M +N+V+W
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N++I+G+++NS D LK M EG +P+ S Q+G Q+H+ + K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
S ND+ +LI+MY KCG + A ++F ++ D+++WN++ISGYA +G A +A
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
F++M+ ++ PD +TF+ +L AC+HAGL N G+ F+ MV D+ +EP +HY+C+VDLLG
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLG 432
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
R G+LEEA ++R M + +A ++G+LLGACRVHKN+E+ EFAA +L +L NA+ Y+
Sbjct: 433 RAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ 492
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
L+N++A RWE+V R+R M++ K+PG SWIE++N++ F S D R+ PE
Sbjct: 493 LANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD--RIHPE 545
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 50/381 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN-SMVEEASKLFDVMPERDN 129
N +I+ ++G I A ++F M +N ++WN+++ G + S + EA +LFD +PE D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV 189
FS+ +M++C Y + F A+ F+ MP
Sbjct: 125 FSYNIMLSC--------------------------------YVRNVNFEKAQSFFDRMPF 152
Query: 190 KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI 249
KD S+N+M+ GY + G+M A F M EKN VSWN M+SG++ GDL A F+
Sbjct: 153 KDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVA 212
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPC-KNVVSWNAMIAAYAQDLQIDEAVKLF 308
P V+W M+ G+ + K+ A +F M KN+V+WNAMI+ Y ++ + ++ +KLF
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 309 IKL------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLI 358
+ P+ G+S + + G + L R+++ + C D+ A T+L+S
Sbjct: 273 RAMLEEGIRPNSSGLSSALL--GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC 330
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM-PKKNSVSWNTMIS 417
+ G + +A K+F + +D + WN+MI+G+ Q G D+AL LFR+M K W T ++
Sbjct: 331 KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 418 ---GYAQAGQMDSAENIFQAM 435
AG ++ F++M
Sbjct: 391 VLLACNHAGLVNIGMAYFESM 411
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 208/391 (53%), Gaps = 22/391 (5%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKN-GKISDARQLFDKM 93
+F N+ I + G ++ A+RVF KN +T+NS++ +K+ ++ +A QLFD++
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
+ + S+N M++ Y+ N E+A FD MP +D SW MIT Y R+G++EKAREL
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ +K E + WN++I+GY + G A F + PV+ +V++ +M+ GY + K+ LA
Sbjct: 180 SMMEKNEVS-WNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 214 FFEKMA-EKNVVSWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCGFARHG 268
F+ M KN+V+WN M+SG+V + +LF E+ PN+ + L G +
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 269 KITEARRLFD----SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
+ R++ S C +V + ++I+ Y + ++ +A KLF + KD V+W+ +I+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
GY + G D+A ++ +M I + A++ G V+ F + RD
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM-VRDYKV 417
Query: 381 ------WNSMIAGFCQSGRMDEALDLFRQMP 405
+ M+ ++G+++EAL L R MP
Sbjct: 418 EPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 175/342 (51%), Gaps = 50/342 (14%)
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV-NS 236
SD +++F L N ++A ++G + AL F M KN ++WN ++ G +
Sbjct: 56 SDQDQIFPL---------NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDP 106
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
+ A QLF++IP P+ S+ ML + R+ +A+ FD MP K+ SWN MI YA
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 297 QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
+ ++++A +LF + K+ VSW+ +I+GYI G L++A + P + + A TA+++G
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 357 LIQTGRVDEASKMFNQLST-RDTICWNSMIAGFCQSGRMDEALDLFRQM------PKKNS 409
++ +V+ A MF ++ ++ + WN+MI+G+ ++ R ++ L LFR M P +
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 410 VS---------------------------------WNTMISGYAQAGQMDSAENIFQAME 436
+S ++IS Y + G++ A +F+ M+
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++++V+WN++I+G+ Q+ AL M +PD TF
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 211/434 (48%), Gaps = 28/434 (6%)
Query: 33 GKHVFNKNQQIIHLGK-LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD 91
K+ N +I + K ++ EA ++F + +YN M+S + +N A+ FD
Sbjct: 89 AKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD 148
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL 151
+M ++ SWNTMI GY +E+A +LF M E++ SW MI+ Y G LEKA
Sbjct: 149 RMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHF 208
Query: 152 LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV-KDLVSYNSMLAGYTQNGKMGL 210
++ P + A W ++I GY K + AE +F M V K+LV++N+M++GY +N +
Sbjct: 209 FKVAPVRGVVA-WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPED 267
Query: 211 ALHFFEKMAEKNV-VSWNLMVSGFVNSGDLSS---ARQLFEKIPNPNAVSWVTMLCG--- 263
L F M E+ + + + + S + +LS+ RQ+ + + + VT L
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 264 -FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL-PHKDGVSWST 321
+ + G++ +A +LF+ M K+VV+WNAMI+ YAQ D+A+ LF ++ +K W T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 322 II--------NGYIRVG--KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
+ G + +G + Y P D T ++ L + G+++EA K+
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIR 445
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDE----ALDLFRQMPKKNSVSWNTMISGYAQAGQMDS 427
+ R + G C+ + E A + Q+ +N+ + + + YA + +
Sbjct: 446 SMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWED 505
Query: 428 AENIFQAMEERNIV 441
+ + M+E N+V
Sbjct: 506 VARVRKRMKESNVV 519
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 186/415 (44%), Gaps = 77/415 (18%)
Query: 53 EEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS 112
E+A F K+ ++N+MI+ +A+ G++ AR+LF M ++N VSWN MI+GY+
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECG 200
Query: 113 MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYA 172
+E+AS F V P R +W MIT Y + K+E A + + + WN++I+GY
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 173 KKGQFSDAEKVFNLM------P---------------------------------VKDLV 193
+ + D K+F M P D+
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-EKIPN- 251
+ S+++ Y + G++G A FE M +K+VV+WN M+SG+ G+ A LF E I N
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNK 380
Query: 252 --PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
P+ +++V +L G + F+SM +D +++
Sbjct: 381 IRPDWITFVAVLLACNHAGLVNIGMAYFESM---------------VRDYKVE------- 418
Query: 310 KLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE---- 365
P D ++ +++ R GKL+EA ++ MP + AA + G + + E
Sbjct: 419 --PQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
A++ QL++++ + + + R ++ + ++M + N V + GY+
Sbjct: 475 AAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVK----VPGYS 525
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/652 (32%), Positives = 355/652 (54%), Gaps = 44/652 (6%)
Query: 136 ITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
I+ + R G L++A + + ++ W ++I+ YA+ G+ S A +VF+ MPV+ SY
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR-SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 196 NSMLAGYTQNG-KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP-- 252
N+M+ +N +G A F + EKN VS+ M++GFV +G A L+ + P
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR 175
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP 312
++V+ +L G+ R GK EA R+F M K VVS ++M+ Y + +I +A LF ++
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 313 HKDGVSWSTIINGYIRVGKLDEA---------------------------------RE-- 337
++ ++W+ +I+GY + G ++ RE
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 338 ----VYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
+ ++MP + D+ +LMS + G + EA +F + +D++ WNS+I G Q
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 393 RMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQ 452
++ EA +LF +MP K+ VSW MI G++ G++ +F M E++ ++W ++I+ F+
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
N Y +AL M ++ P+ TF G Q+H ++K +NDL V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 513 SNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV 572
N+L++MY KCG A ++F+ I +++S+N++ISGY+ NG+ +A K F + S
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
P+ VTF+ +LSAC H G + G FK M + IEP +HY+C+VDLLGR G L++A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 633 NVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
N++ M K ++G+WGSLL A + H +++ E AA +L ELEP +A+ Y+ LS +++ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 693 RWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
+ + +R+ + + KR K PG SWI ++ ++ FL+ D +L E I L
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTL 707
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/603 (27%), Positives = 305/603 (50%), Gaps = 58/603 (9%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
+F N QI + G ++EA +F ++++V++ +MIS +A+NGK+S A Q+FD+M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 96 RNLVSWNTMIAGYLHNSM-VEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
R S+N MI + N + +A +LF +PE++ S+A MIT + R G+ ++A L
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 155 VPDKL-ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
P K +S N +++GY + G++++A +VF M VK++VS +SM+ GY + G++ A
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-------NPNAVSWVTMLC-GFA 265
F++M E+NV++W M+ G+ +G LF ++ N N ++ + C F
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 266 RHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
R+ + ++ L MP + ++ N++++ Y++ + EA +F + +KD VSW+++I
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
G ++ ++ EA E++ +MP KD+ + T ++ G G + + ++F + +D I W +M
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 385 IAGFCQSGRMDEALDLFRQMPKK----NSVSW---------------------------- 412
I+ F +G +EAL F +M +K NS ++
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 413 -------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
N+++S Y + G + A IF + E NIVS+N++I+G+ N ALK +
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN---DLFVSNALIAMYAK 522
+ GK+P+ TF +G + + + S I D + ++ + +
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA--CMVDLLGR 587
Query: 523 CGRVESAEQVFTAIECVDLIS-WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
G ++ A + + + C W SL+S + A A K+++ E+ PD T
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI--ELEPDSATPYV 645
Query: 582 MLS 584
+LS
Sbjct: 646 VLS 648
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 161/350 (46%), Gaps = 34/350 (9%)
Query: 25 KLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKIS 84
K G + K + N I L + ++ EA +F K++V++ MI F+ G+IS
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 85 DARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGK 144
+LF M +++ ++W MI+ ++ N EEA F M +++ + YT
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE-----VCPNSYTFSSV 444
Query: 145 LEKARELLELVPD--------KL----ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL 192
L L +L+ K+ + + NS+++ Y K G +DA K+F+ + ++
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
VSYN+M++GY+ NG AL F + E N V++ ++S V+ G + + F+
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 249 I-------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQ 300
+ P P+ + + L G R G + +A L +MPCK + W ++++A L+
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLG--RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 301 ID---EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
+D A K I+L + + Y +GK + + N K I
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRI 672
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 339/642 (52%), Gaps = 54/642 (8%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK--MAEKN 222
N +I Y K + + A ++F+ + D ++ +M++GY +G + LA FEK + ++
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFD 278
V +N M++GF ++ D SA LF K+ + P+ ++ ++L G A + F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 279 SMPCKNVVSW-----NAMIAAYAQDLQ----IDEAVKLFIKLPHKDGVSWSTIINGYIRV 329
+ K+ + NA+++ Y++ + A K+F ++ KD SW+T++ GY++
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 330 GKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLST------------- 375
G D E+ M + A A++SG + G EA +M ++ +
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 376 ----------------------RDTICW---NSMIAGFCQSGRMDEALDLFRQMPKKNSV 410
R+ + NS+++ + + G+ DEA +F +MP K+ V
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
SWN ++SGY +G + A+ IF+ M+E+NI+SW +I+G +N + LK M REG
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
+P F G Q H +LK G+ + L NALI MYAKCG VE A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 531 QVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
QVF + C+D +SWN+LI+ +G+ EA +++ML + + PD++T + +L+ACSHAG
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
L +QG F M + I P A+HY+ L+DLL R G+ +A +V+ + K A +W +L
Sbjct: 533 LVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592
Query: 651 LGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
L CRVH N+E+G AA +L L P + Y+ LSNMHA G+WEEV R+R LMRD+
Sbjct: 593 LSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Query: 711 KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
K CSWIE++ Q+ FL DD+ E + I L + ++R
Sbjct: 653 KEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 196/435 (45%), Gaps = 63/435 (14%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA------------------ 106
++ V YN+MI+ F+ N A LF KM N A
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 107 ----------GYLHN----------------SMVEEASKLFDVMPERDNFSWALMITCYT 140
GY+ + S++ A K+FD + E+D SW M+T Y
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 141 RKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYN 196
+ G + ELLE + D ++ +N++I+GY +G + +A ++ M D +Y
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSW---NLMVSGFVNSGDLSSARQLFEKIPNPN 253
S++ G + L + + S+ N +VS + G AR +FEK+P +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
VSW +L G+ G I EA+ +F M KN++SW MI+ A++ +E +KLF +
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 314 KDGVSWSTIINGYIR----VGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDE 365
+ +G I+ +G ++ + Q+ ++A AL++ + G V+E
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQ 421
A ++F + D++ WN++IA Q G EA+D++ +M KK + ++ T+++ +
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530
Query: 422 AGQMDSAENIFQAME 436
AG +D F +ME
Sbjct: 531 AGLVDQGRKYFDSME 545
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 172/360 (47%), Gaps = 45/360 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K GK +EA +F K+LV++N+++S + +G I +A+ +F +M ++N++SW MI+G
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 108 YLHNSMVEEASKLFDVM------PERDNFSWAL----MITCYTRKGKLEKARELLELVPD 157
N EE KLF M P FS A+ ++ Y + +LL++ D
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA--QLLKIGFD 449
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
SA N++I YAK G +A +VF MP D VS+N+++A Q+G A+ +E+
Sbjct: 450 SSLSA-GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 218 MAEKNV----VSWNLMVSGFVNSGDLSSARQLFE------KIPNPNAVSWVTMLCGFARH 267
M +K + ++ +++ ++G + R+ F+ +IP P A + ++ R
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP-PGADHYARLIDLLCRS 567
Query: 268 GKITEARRLFDSMPCKNVVS-WNAMIAAYA----QDLQIDEAVKLFIKLPHKDGV----- 317
GK ++A + +S+P K W A+++ +L I A KLF +P DG
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627
Query: 318 -------SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
W + RV KL R V ++ C I ET + + L+ EA ++
Sbjct: 628 NMHAATGQWEEV----ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVY 683
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL- 98
N I K G VEEA +VF + V++N++I+ ++G ++A ++++M ++ +
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 99 ---VSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKA 148
++ T++ H +V++ K FD M P D+++ + + C R GK A
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC--RSGKFSDA 573
Query: 149 RELLELVPDKLESACWNSVIAGYAKKGQFS----DAEKVFNLMPVKD 191
++E +P K + W ++++G G A+K+F L+P D
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 352 bits (903), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 392/816 (48%), Gaps = 138/816 (16%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ +N +++ ++AK +ISDAR++F+ + N V W + +GY+ + EEA +F+
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELV--PDKLESACWNSVIAGYAKKGQ 176
M + D+ ++ +I Y R GKL+ AR L + PD + WN +I+G+ K+G
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV---AWNVMISGHGKRGC 307
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLA------GYTQNGKMGLALH----------------- 213
+ A + F M + S S L G N +GL +H
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 214 ----------------FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPN 253
FE + EKN V WN M+ G+ ++G+ +LF + N +
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 254 AVSWVTML--CG---------------------------------FARHGKITEARRLFD 278
++ ++L C +A+ G + +AR++F+
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDE 334
M ++ V+WN +I +Y QD EA LF ++ DG ++ + V L +
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 335 AREVYN-QMPC---KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
++V+ + C +D+ ++L+ + G + +A K+F+ L + N++IAG+ Q
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 391 SGRMDEALDLFRQM-------------------PKKNSVSWNTMISG------------- 418
+ ++EA+ LF++M K S++ T G
Sbjct: 608 NN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 419 --------YAQAGQMDSAENIFQAMEE-RNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
Y + M A +F + ++IV W +++G QN Y +ALK M +
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G PDQ+TF + G +H I + D SN LI MYAKCG ++ +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 530 EQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
QVF + +++SWNSLI+GYA NGYA +A K F M ++PD++TF+G+L+ACSH
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
AG + G +F+ M+ + IE +H +C+VDLLGR G L+EA + + ++K +A LW
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWS 906
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
SLLGACR+H + GE +A +L ELEP N+S Y+ LSN++A G WE+ LR +MRD+
Sbjct: 907 SLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRG 966
Query: 709 AGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
K+PG SWI+V+ + F + D I++ L
Sbjct: 967 VKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFL 1002
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 268/541 (49%), Gaps = 36/541 (6%)
Query: 116 EASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKG 175
++ K+FD MP+R + AL R GK ++ L+ + E N+++ YAK
Sbjct: 60 KSRKVFDEMPQR--LALAL------RIGKAVHSKSLILGIDS--EGRLGNAIVDLYAKCA 109
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH----FFEKMAEKNVVSWNLMVS 231
Q S AEK F+ + KD+ ++NSML+ Y+ GK G L FE N ++++++S
Sbjct: 110 QVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLS 168
Query: 232 GFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
++ RQ+ + N+ ++ +A+ +I++ARR+F+ + N V
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC 228
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKL---PHK-DGVSWSTIINGYIRVGKLDEAREVYNQMP 343
W + + Y + +EAV +F ++ H+ D +++ T+IN YIR+GKL +AR ++ +M
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQL------STRDTICWNSMIAGFCQSGRMDEA 397
D+ A ++SG + G A + F + STR T+ S+++ +D
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL--GSVLSAIGIVANLDLG 346
Query: 398 LDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
L + + K N ++++S Y++ +M++A +F+A+EE+N V WN++I G+ N
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
++ + M G D TF ++G+Q H I+K +LFV
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
NAL+ MYAKCG +E A Q+F + D ++WN++I Y + EAF FK+M +V
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
D L AC+H QG + C+ ++ S L+D+ + G +++A
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 634 V 634
V
Sbjct: 586 V 586
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 272/611 (44%), Gaps = 84/611 (13%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--------NLVSWNTMIAG- 107
R++ + + + + ++ + K+ +R++FD+M QR V ++I G
Sbjct: 32 RIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGI 91
Query: 108 -------------YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA-RELLE 153
Y + V A K FD + E+D +W M++ Y+ GK K R +
Sbjct: 92 DSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVS 150
Query: 154 LVPDKL--ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG-----YTQNG 206
L +++ ++ V++ A++ ++ M +K + NS G Y +
Sbjct: 151 LFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLERNSYCGGALVDMYAKCD 209
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLC 262
++ A FE + + N V W + SG+V +G A +FE++ + P+ +++VT++
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI 322
+ R GK+ +AR LF M +VV+WN MI+ + + A++ F + S +
Sbjct: 270 TYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 323 INGYIR----VGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLS 374
+ + V LD V+ + +A+ + S L+ + +++ A+K+F L
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK---------------------------- 406
++ + WN+MI G+ +G + ++LF M
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 407 -----------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
KN N ++ YA+ G ++ A IF+ M +R+ V+WN++I ++Q+
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A M G D + G Q+H +K G DL ++
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
LI MY+KCG ++ A +VF+++ ++S N+LI+GY+ N EA F++ML+ V P
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPS 628
Query: 576 QVTFIGMLSAC 586
++TF ++ AC
Sbjct: 629 EITFATIVEAC 639
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 209/407 (51%), Gaps = 25/407 (6%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL------PHKDGV 317
+A+ +++ A + FD + K+V +WN+M++ Y+ + + ++ F+ L P+K
Sbjct: 105 YAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK--F 161
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQL 373
++S +++ R ++ R+++ M + + AL+ + R+ +A ++F +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAE 429
+T+CW + +G+ ++G +EA+ +F +M + + +++ T+I+ Y + G++ A
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+F M ++V+WN +I+G + A++ M + K +ST
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G +H +K G ++++V ++L++MY+KC ++E+A +VF A+E + + WN++I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
GYA NG + + + F M S D TF +LS C+ + G +++ +
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK----K 457
Query: 610 PLAEHY---SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
LA++ + LVD+ + G LE+A + M + N W +++G+
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 65/457 (14%)
Query: 3 SSYSWDD--------TRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEE 54
S Y+ DD T +H ++M S H + I K++F N + K G +E+
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
A ++F ++ VT+N++I + ++ S+A LF +M+ +VS +A S +
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA-----STL 536
Query: 115 EEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKK 174
+ + + + + + C + K L++ L + +S+I Y+K
Sbjct: 537 KACTHVHGLYQGKQ-------VHCLSVKCGLDR----------DLHTG--SSLIDMYSKC 577
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
G DA KVF+ +P +VS N+++AGY+QN E+ VV + M++ V
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNN------------LEEAVVLFQEMLTRGV 625
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
N +++ A + E P +++ T HG+IT +R F S +S ++
Sbjct: 626 NPSEITFA-TIVEACHKPESLTLGTQF-----HGQIT--KRGFSSEGEYLGIS---LLGM 674
Query: 295 YAQDLQIDEAVKLFIKLPH-KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
Y + EA LF +L K V W+ +++G+ + G +EA + Y +M + + A
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 354 MSGLIQTGRVDEA--------SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+++ V + S +F+ D + N++I + + G M + +F +M
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 406 KK-NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
++ N VSWN++I+GYA+ G + A IF +M + +I+
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G +H L G ++ + NA++ +YAKC +V AE+ F +E D+ +WNS++S Y
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMY 135
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
+ G + ++F + ++ P++ TF +LS C+ G + M++ +E
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLERN 194
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE---IGEFAAM 668
+ LVD+ + R+ +A V + V N W L V L + F M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG-YVKAGLPEEAVLVFERM 252
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
R P + + ++T+ N + G+ ++ L
Sbjct: 253 RDEGHRPDHLA-FVTVINTYIRLGKLKDARLL 283
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 352 bits (902), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 223/739 (30%), Positives = 376/739 (50%), Gaps = 66/739 (8%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R+ + + V N +I ++++NG + AR++FD + ++ SW MI+G N E
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 117 ASKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSV 167
A +LF +MP FS +++ C + LE +L LV ++ N++
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFS-SVLSAC-KKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNV 223
++ Y G AE +F+ M +D V+YN+++ G +Q G A+ F++M E +
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS----WVTMLCGFARHGKITEARRLFDS 279
+ +V G L +QL S +L +A+ I A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV----SWSTIINGYIRVGKLDEA 335
+NVV WN M+ AY + + ++F ++ ++ V ++ +I+ IR+G L+
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 336 REVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
++++Q+ + + S LI + G++D A + + + +D + W +MIAG+ Q
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 392 GRMDEALDLFRQMPKK----------NSVS-----------------------------W 412
D+AL FRQM + N+VS
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N +++ Y++ G+++ + F+ E + ++WN+L++GF Q+ +AL+ V M REG
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
+ TF + G Q+H I K+GY ++ V NALI+MYAKCG + AE+
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + + +SWN++I+ Y+ +G+ EA +F QM+ V P+ VT +G+LSACSH GL
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
++G+ F+ M ++ + P EHY C+VD+L R G L A ++ M +K +A +W +LL
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
AC VHKN+EIGEFAA L ELEP +++ Y+ LSN++A + +W+ + R M++K K
Sbjct: 870 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 929
Query: 713 PGCSWIEVQNQIQCFLSDD 731
PG SWIEV+N I F D
Sbjct: 930 PGQSWIEVKNSIHSFYVGD 948
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/578 (23%), Positives = 261/578 (45%), Gaps = 79/578 (13%)
Query: 123 VMPERDNFSWALMITCYTRKGKLEKAREL----LELVPDKLESACWNS-VIAGYAKKGQF 177
+ P W L+ C G L++ R+L L+L D + C + + Y KG
Sbjct: 80 IRPNHQTLKW-LLEGCLKTNGSLDEGRKLHSQILKLGLDS--NGCLSEKLFDFYLFKGDL 136
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS- 236
A KVF+ MP + + ++N M+ +G F +M +NV SG + +
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 237 --GDLS-------SARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
G ++ AR L++ + + V ++ ++R+G + ARR+FD + K+ S
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKL--------PHKDGVSWSTIINGYIRVGKLDEAREVY 339
W AMI+ +++ EA++LF + P+ ++S++++ ++ L+ +++
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY----AFSSVLSACKKIESLEIGEQLH 311
Query: 340 NQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
+ +++T AL+S G + A +F+ +S RD + +N++I G Q G +
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 396 EALDLFRQM------PKKNSV----------------------------SWNTMISG--- 418
+A++LF++M P N++ + N I G
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 419 --YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
YA+ +++A + F E N+V WN ++ + ++ + M E P+Q
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ ++G Q+H I+K+ + + +V + LI MYAK G++++A +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
D++SW ++I+GY + +A F+QML + D+V +SAC+ +G
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 597 DLF-KCMVEDFAIE-PLAEHYSCLVDLLGRMGRLEEAF 632
+ + V F+ + P + LV L R G++EE++
Sbjct: 612 QIHAQACVSGFSSDLPFQ---NALVTLYSRCGKIEESY 646
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 55/419 (13%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYI 327
G + A ++FD MP + + +WN MI A I E LF+++ ++ +G +
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 328 RVGK-----LDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDT 378
+ D +++ ++ + + T + + LI + G VD A ++F+ L +D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQ------MPKKNSVS--------------------- 411
W +MI+G ++ EA+ LF MP + S
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 412 ------------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
N ++S Y G + SAE+IF M +R+ V++N+LI G Q A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
++ M +G +PD +T G QLH Y K G+ ++ + AL+ +
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
YAKC +E+A F E +++ WN ++ Y L +F+ F+QM EE+VP+Q T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 580 IGMLSACSHAGLANQGLDLFKCMVE-DFAIEPLAEHYSC--LVDLLGRMGRLEEAFNVV 635
+L C G G + +++ +F + Y C L+D+ ++G+L+ A++++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 548
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 185/428 (43%), Gaps = 54/428 (12%)
Query: 297 QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRV-GKLDEAREVYNQMPCKDIAAETALMS 355
Q+ +ID I+ P+ + W ++ G ++ G LDE R++++Q+ + + L
Sbjct: 68 QEKRIDSVENRGIR-PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 356 GLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN--- 408
L G + A K+F+++ R WN MI + E LF +M +N
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 409 -------------------------------------SVSWNTMISGYAQAGQMDSAENI 431
+V N +I Y++ G +D A +
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F + ++ SW ++I+G +N +A++ M G P F
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G QLH +LK G+ +D +V NAL+++Y G + SAE +F+ + D +++N+LI+G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAIEP 610
+ GY +A + FK+M + + PD T ++ ACS G +G L + FA
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAM 668
E L++L + +E A + +V+ N LW +L A + +L F M
Sbjct: 425 KIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 669 RLSELEPH 676
++ E+ P+
Sbjct: 482 QIEEIVPN 489
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 206/497 (41%), Gaps = 98/497 (19%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
HLG L E +FSN ++ VTYN++I+ ++ G A +LF +M L
Sbjct: 335 HLGNLISAE---HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL------ 385
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP-------D 157
E D+ + A ++ + G L + ++L +
Sbjct: 386 ---------------------EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
K+E A N YAK A F V+++V +N ML Y + + F +
Sbjct: 425 KIEGALLNL----YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 218 MAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGK 269
M + +V ++ ++ + GDL Q+ +I NA ++ +A+ GK
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIING 325
+ A + K+VVSW MIA Y Q D+A+ F ++ + D V + ++
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 326 YIRVGKLDEAREVYNQMPC-----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
+ L E ++++ Q C D+ + AL++ + G+++E+ F Q D I
Sbjct: 601 CAGLQALKEGQQIHAQ-ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA 659
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSW------------------------ 412
WN++++GF QSG +EAL +F +M ++ N+ ++
Sbjct: 660 WNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT 719
Query: 413 -----------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
N +IS YA+ G + AE F + +N VSWN++I + ++ +AL
Sbjct: 720 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 779
Query: 462 SLVLMGREGKKPDQSTF 478
S M +P+ T
Sbjct: 780 SFDQMIHSNVRPNHVTL 796
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 148/319 (46%), Gaps = 44/319 (13%)
Query: 39 KNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
+N + + GK+EE+ F T + + +N+++S F ++G +A ++F +M++ +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+ +NF++ + + +++ +++ ++
Sbjct: 689 ---------------------------DNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 159 ---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
E+ N++I+ YAK G SDAEK F + K+ VS+N+++ Y+++G AL F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 216 EKMAEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIP-----NPNAVSWVTMLCGFAR 266
++M NV ++ + G +++ G + FE + +P +V ++ R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAAYA--QDLQIDE-AVKLFIKLPHKDGVSWSTI 322
G ++ A+ MP K + + W +++A ++++I E A ++L +D ++ +
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 323 INGYIRVGKLDEAREVYNQ 341
N Y K D AR++ Q
Sbjct: 902 SNLYAVSKKWD-ARDLTRQ 919
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G + +A + F KN V++N++I+ ++K+G S+A FD+M N+
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 100 SWNTMIAGYL----HNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
+ + G L H +V++ F+ M S + ++ TR G L +A+E
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 151 LLELVPDKLESACWNSVIAGYA-----KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
++ +P K ++ W ++++ + G+F+ A + L P +D +Y + Y +
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA-AHHLLELEP-EDSATYVLLSNLYAVS 908
Query: 206 GKMGLALHFFEKMAEKNV 223
K +KM EK V
Sbjct: 909 KKWDARDLTRQKMKEKGV 926
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/666 (30%), Positives = 341/666 (51%), Gaps = 46/666 (6%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE 126
++ N ++ +++++GK+ AR LFD+M RN SWNTMI GY+++ + + FD+MPE
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNL 186
RD +SW ++++ + + G+L AR L +P+K + NS++ GY G +A ++F
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEK-DVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 187 MPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN----SGDLSS 241
+ D ++ ++L + + ++ V + M S VN GDL
Sbjct: 181 LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI 301
A + E+I P+ S ++ G+A G++ E+R LFD + V+ WN+MI+ Y +
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMK 300
Query: 302 DEAVKLFIKL---PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETAL 353
EA+ LF ++ +D + + +IN I +G L+ ++++ CK DI + L
Sbjct: 301 MEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCH-ACKFGLIDDIVVASTL 359
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN 413
+ + G EA K+F+++ + DTI NSMI + GR+D+A +F ++ K+ +SWN
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+M +G++Q G F M + ++ +
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPT------------------------------- 448
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
D+ + ++G Q+ G +D VS++LI +Y KCG VE +VF
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
+ D + WNS+ISGYA NG EA FK+M + P Q+TF+ +L+AC++ GL
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+G LF+ M D P EH+SC+VDLL R G +EEA N+V M + +W S+L
Sbjct: 569 EGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
C + +G+ AA ++ ELEP N+ Y+ LS + A +G WE +R LMR+ K P
Sbjct: 629 CVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNP 688
Query: 714 GCSWIE 719
G SW +
Sbjct: 689 GSSWTD 694
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 146/632 (23%), Positives = 283/632 (44%), Gaps = 96/632 (15%)
Query: 14 NHKIKMTSMKHKLTIG-----SIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLV 68
NH ++M S K+ I + ++ F+ N I G+ ++R F ++
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM---- 124
++N ++S FAK G++S AR+LF+ M ++++V+ N+++ GY+ N EEA +LF +
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA 185
Query: 125 --------------------------------PERDNFSWALMITCYTRKGKLEKARELL 152
E D+ + ++ Y + G L A +L
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 153 ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
E + + + + +++I+GYA G+ +++ +F+ + ++ +NSM++GY N AL
Sbjct: 246 EQIREPDDHS-LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 213 HFFEKM---AEKNVVSWNLMVSGFVNSGDLSSARQL------FEKIPNPNAVSWVTMLCG 263
F +M ++ + +++ + G L + +Q+ F I + S T+L
Sbjct: 305 VLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS--TLLDM 362
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
+++ G EA +LF + + + N+MI Y +ID+A ++F ++ +K +SW+++
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR------- 376
NG+ + G E E ++QM D+ + +S +I + ++ Q+ R
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLD 482
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
D + +S+I +C+ G ++ +F M K + V WN+MISGYA GQ A ++F+
Sbjct: 483 SDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK- 541
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN 495
M G +P Q TF + G
Sbjct: 542 ------------------------------MSVAGIRPTQITFMVVLTACNYCGLVEEGR 571
Query: 496 QLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYAL 553
+L E + + G++ D + ++ + A+ G VE A + + VD W+S++ G
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
NGY KA ++++ E+ P+ LSA
Sbjct: 632 NGYKAMGKKAAEKII--ELEPENSVAYVQLSA 661
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 198/631 (31%), Positives = 342/631 (54%), Gaps = 25/631 (3%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESA-CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
++ Y++ G AR+L + +P L +A WN+V++ Y+K+G + F+ +P +D V
Sbjct: 55 LMNVYSKTGYALHARKLFDEMP--LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-- 251
S+ +M+ GY G+ A+ M ++ + ++ + S + + +K+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 252 ------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
N ++L +A+ G A+ +FD M +++ SWNAMIA + Q Q+D A+
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 306 KLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP-----CKDIAAETALMSGLIQT 360
F ++ +D V+W+++I+G+ + G A +++++M D +++S
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 361 GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV--SWNT 414
++ ++ + + T I N++I+ + + G ++ A L Q K+ +
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
++ GY + G M+ A+NIF ++++R++V+W ++I G+ Q+ Y +A+ M G++P+
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
T G Q+H +KSG I + VSNALI MYAK G + SA + F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 535 AIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
I C D +SW S+I A +G+A EA + F+ ML E + PD +T++G+ SAC+HAGL N
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
QG F M + I P HY+C+VDL GR G L+EA + M ++ + WGSLL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
CRVHKN+++G+ AA RL LEP N+ Y L+N+++ G+WEE ++R M+D R K
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 714 GCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
G SWIEV++++ F +D PE +I +
Sbjct: 653 GFSWIEVKHKVHVFGVEDG--THPEKNEIYM 681
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 164/651 (25%), Positives = 297/651 (45%), Gaps = 115/651 (17%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
RV + + ++ N++++V++K G AR+LFD+M R SWNT+++ Y ++
Sbjct: 39 RVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDS 98
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKA-RELLELVPDKLESACW----------- 164
+ FD +P+RD+ SW MI Y G+ KA R + ++V + +E +
Sbjct: 99 TCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA 158
Query: 165 --------------------------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
NS++ YAK G A+ VF+ M V+D+ S+N+M
Sbjct: 159 TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAM 218
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG-DLSS----ARQLFEKIPNPN 253
+A + Q G+M LA+ FE+MAE+++V+WN M+SGF G DL + ++ L + + +P+
Sbjct: 219 IALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFI 309
+ ++L A K+ +++ + + NA+I+ Y++ ++ A +L
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 310 KLPHKDGV--SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
+ KD ++ +++GYI++G +++A+ ++ + +D+ A TA++ G Q G EA
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 368 KMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-----SVSWNTMISG 418
+F + ++ +M++ + + K SVS N +I+
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS-NALITM 457
Query: 419 YAQAGQMDSAENIFQAME-ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA+AG + SA F + ER+ VSW S+I Q+ +AL+ M EG +PD T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC---GRVESAEQVFT 534
+ + +++ C G V Q F
Sbjct: 518 Y--------------------------------------VGVFSACTHAGLVNQGRQYFD 539
Query: 535 AIECVDLI-----SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
++ VD I + ++ + G EA + ++M E PD VT+ +LSAC
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE---PDVVTWGSLLSACR-- 594
Query: 590 GLANQGLDLFKCMVED-FAIEPL-AEHYSCLVDLLGRMGRLEEAFNVVRGM 638
++ +DL K E +EP + YS L +L G+ EEA + + M
Sbjct: 595 --VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 294/544 (54%), Gaps = 40/544 (7%)
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+++ + S + AR++F ++P+P+ + M+ G+ R ++ +A LFD MP ++VVS
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
WN+MI+ + ++ AVKLF ++P + VSW+ ++NG R GK+D+A ++ QMP KD
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
AA +++ G +Q G+VD+A K+F Q+ ++ I W +MI G Q+ R EALDLF+ M +
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 407 ----------------KNSVSWN----------------------TMISGYAQAGQMDSA 428
N+ +++ ++I+ YA ++ +
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 429 ENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
+F + W +L++G+ N + DAL M R P+QSTF
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
G ++H +K G D FV N+L+ MY+ G V A VF I ++SWNS+I
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF-A 607
G A +G AF F QM+ PD++TF G+LSACSH G +G LF M
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH 459
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
I+ +HY+C+VD+LGR G+L+EA ++ M VK N +W +LL ACR+H +++ GE AA
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAA 519
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCF 727
+ L+ +++ Y+ LSN++A AGRW V +LRV M+ K PG SW+ ++ + F
Sbjct: 520 AAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEF 579
Query: 728 LSDD 731
S D
Sbjct: 580 FSGD 583
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 214/413 (51%), Gaps = 37/413 (8%)
Query: 51 KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH 110
+++EA VF+ ++ Y MI+ + ++ ++ DA LFD+M R++VSWN+MI+G +
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 111 NSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG 170
+ A KLFD MPER SW M+ R GK+++A L +P K ++A WNS++ G
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHG 168
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----W 226
Y + G+ DA K+F MP K+++S+ +M+ G QN + G AL F+ M + S +
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 227 NLMVSGFVNSGDLSSARQ----------LFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+++ N+ Q L+E+ + + +++ +A +I ++R++
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF------YANCKRIGDSRKV 282
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK------LPHKDGVSWSTIINGYIRVG 330
FD + V W A+++ Y+ + + ++A+ +F LP++ ++++ +N +G
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS--TFASGLNSCSALG 340
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIA 386
LD +E++ + + + + L+ +G V++A +F ++ + + WNS+I
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 387 GFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAM 435
G Q GR A +F QM + N +++ ++S + G ++ +F M
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 229/454 (50%), Gaps = 31/454 (6%)
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA 162
+I +L + ++EA ++F+ +P + MIT YTR +L A L + +P + +
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-DVV 98
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
WNS+I+G + G + A K+F+ MP + +VS+ +M+ G ++GK+ A F +M K+
Sbjct: 99 SWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD 158
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-- 280
+WN MV G++ G + A +LF+++P N +SW TM+CG ++ + EA LF +M
Sbjct: 159 TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLR 218
Query: 281 --------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP--HKDGVSWSTIINGYIRVG 330
P V++ A A+ +Q+ L IKL +++ VS +++I Y
Sbjct: 219 CCIKSTSRPFTCVITACANAPAFHMGIQVH---GLIIKLGFLYEEYVS-ASLITFYANCK 274
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
++ ++R+V+++ + +A TAL+SG + ++A +F+ + + S A
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 391 SGRMDEALDLFRQMP--------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
S LD ++M + ++ N+++ Y+ +G ++ A ++F + +++IVS
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WNS+I G Q+ A M R K+PD+ TF + G +L Y+
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM- 453
Query: 503 KSGYINDLFVS----NALIAMYAKCGRVESAEQV 532
S IN + ++ + +CG+++ AE++
Sbjct: 454 -SSGINHIDRKIQHYTCMVDILGRCGKLKEAEEL 486
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 196/433 (45%), Gaps = 36/433 (8%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
+ V + N I + G + AV++F +++V++ +M++ ++GK+ A +LF +M
Sbjct: 95 RDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQM 154
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
++ +WN+M+ GYL V++A KLF MP ++ SW MI + E++ E L+
Sbjct: 155 PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQN---ERSGEALD 211
Query: 154 LVPDKLE------SACWNSVIAGYAKKGQFSDAEKVFNLMP-----VKDLVSYNSMLAGY 202
L + L S + VI A F +V L+ ++ VS S++ Y
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVS-ASLITFY 270
Query: 203 TQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWV 258
++G + F++ + V W ++SG+ + A +F + PN ++
Sbjct: 271 ANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFA 330
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNA-----MIAAYAQDLQIDEAVKLFIKLPH 313
+ L + G + + + + K + +A ++ Y+ +++AV +FIK+
Sbjct: 331 SGLNSCSALGTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK 389
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKM 369
K VSW++II G + G+ A ++ QM D T L+S G +++ K+
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
Query: 370 FNQLST------RDTICWNSMIAGFCQSGRMDEALDLFRQM-PKKNSVSWNTMISGYAQA 422
F +S+ R + M+ + G++ EA +L +M K N + W ++S
Sbjct: 450 FYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Query: 423 GQMDSAENIFQAM 435
+D E A+
Sbjct: 510 SDVDRGEKAAAAI 522
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 227/774 (29%), Positives = 377/774 (48%), Gaps = 98/774 (12%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R+++N + + + +S + ++ +A LFDK R+ S+ +++ G+ + +E
Sbjct: 21 RIYANGVAQVRIYCFGTVS----SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQE 76
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLESAC-----------W 164
A +LF + + + C L+ + L EL +L C
Sbjct: 77 AKRLF-----LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------ 218
S++ Y K F D KVF+ M +++V++ ++++GY +N L F +M
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 219 -------------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFA 265
AE+ V L V V L + IP N++ + + CG
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD------KTIPVSNSLINLYLKCGNV 245
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWSTIIN 324
R +AR LFD K+VV+WN+MI+ YA + EA+ +F + + +S S+ +
Sbjct: 246 R-----KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 325 GYIRVGKLDEAREVYNQMPCK--------DIAAETALMSGLIQTGRVDEASKMFNQLS-T 375
L E R Q+ C D TALM + + +A ++F ++
Sbjct: 301 VIKLCANLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK---------------------------- 407
+ + W +MI+GF Q+ +EA+DLF +M +K
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV 419
Query: 408 -------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
+S ++ Y + G+++ A +F +++++IV+W++++ G+ Q A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ-VGNQLHEYILKSGYINDLFVSNALIAM 519
K + + G KP++ TF G Q H + +KS + L VS+AL+ M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
YAK G +ESAE+VF DL+SWNS+ISGYA +G A++A FK+M +V D VTF
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
IG+ +AC+HAGL +G F MV D I P EH SC+VDL R G+LE+A V+ M
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
A + +W ++L ACRVHK E+G AA ++ ++P +++ Y+ LSNM+AE+G W+E +
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRD 753
+R LM ++ K PG SWIEV+N+ FL+ D + I + L +S ++D
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 195/423 (46%), Gaps = 76/423 (17%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-------SQRNLVS 100
K G V +A +F T K++VT+NSMIS +A NG +A +F M S+ + S
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 101 WNTMIAGY--------LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL 152
+ A LH S+V+ LFD N ALM+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGF-LFD-----QNIRTALMV---------------- 338
Query: 153 ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLA 211
Y+K DA ++F + V ++VS+ +M++G+ QN A
Sbjct: 339 -----------------AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN----AVSWVTMLCGFARH 267
+ F +M K V S + + + S ++ ++ N + +L + +
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTI 322
GK+ EA ++F + K++V+W+AM+A YAQ + + A+K+F +L K G+ ++S+I
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSI 500
Query: 323 I------NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
+ N + GK + +++ + +AL++ + G ++ A ++F + +
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLD-SSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIF 432
D + WNSMI+G+ Q G+ +ALD+F++M K+ + V++ + + AG ++ E F
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 433 QAM 435
M
Sbjct: 620 DIM 622
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLGKVEEA +VFS K++V +++M++ +A+ G+ A ++F ++++ + +
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 108 YLHNSMVEEAS----KLFDVMPERDNFSWAL-----MITCYTRKGKLEKARELLELVPDK 158
L+ AS K F + +L ++T Y +KG +E A E+ + +K
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHF 214
+ WNS+I+GYA+ GQ A VF M + D V++ + A T G + +
Sbjct: 560 -DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 215 FEKMAEKNVVSW-----NLMVSGFVNSGDLSSARQLFEKIPNPNAVS-WVTMLCGFARHG 268
F+ M ++ + MV + +G L A ++ E +PNP + W T+L H
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 269 KITEARRL 276
K TE RL
Sbjct: 679 K-TELGRL 685
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 332 bits (852), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 341/644 (52%), Gaps = 50/644 (7%)
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
A+KLFD MP+RD+ +W ++ R G EKA EL ++ Q
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELF--------------------REMQ 81
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM-GLALHFFEKMAEKNVVSWNLMVSGFVN 235
FS A K ++ VK L+ S G+ + ++ G L E NV N ++ +
Sbjct: 82 FSGA-KAYDSTMVK-LLQVCSNKEGFAEGRQIHGYVLRLG---LESNVSMCNSLIVMYSR 136
Query: 236 SGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAM 291
+G L +R++F + + N SW ++L + + G + +A L D M ++V+WN++
Sbjct: 137 NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSL 196
Query: 292 IAAYAQDLQIDEAVKLFIKL------PHKDGVS---WSTIINGYIRVGKLDEAREVYNQM 342
++ YA +A+ + ++ P +S + G++++GK + NQ+
Sbjct: 197 LSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL 256
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
D+ ET L+ I+TG + A +F+ + ++ + WNS+++G + + +A L
Sbjct: 257 -WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 403 QMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNS 454
+M K+ ++++WN++ SGYA G+ + A ++ M+E+ N+VSW ++ +G +N
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+ +ALK + M EG P+ +T G ++H + L+ I D +V+
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MY K G ++SA ++F I+ L SWN ++ GYA+ G E AF ML + P
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D +TF +LS C ++GL +G F M + I P EH SC+VDLLGR G L+EA++
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
++ M +K +A +WG+ L +C++H++LE+ E A RL LEPHN++NY+ + N+++ RW
Sbjct: 556 IQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 615
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
E+VER+R LMR+ R SWI++ + F ++ G+ P+
Sbjct: 616 EDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAE--GKTHPD 657
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 23/405 (5%)
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI 322
G HG + +R D+ + V +A + Y + + + A KLF ++P +D ++W+ I
Sbjct: 6 GLTIHGGLI--KRGLDNSDTRVV---SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT---------GRVDEASKMFNQL 373
+ +R G ++A E++ +M A + M L+Q GR + L
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
+ ++C NS+I + ++G+++ + +F M +N SWN+++S Y + G +D A +
Sbjct: 121 ESNVSMC-NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 434 AME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
ME + +IV+WNSL++G+ L DA+ L M G KP S+
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
++G +H YIL++ D++V LI MY K G + A VF ++ ++++WNSL+S
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
G + +A +M E + PD +T+ + S + G + LD+ M E +
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVA 358
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLL 651
P ++ + + G A V M V NA +LL
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 225/500 (45%), Gaps = 80/500 (16%)
Query: 57 RVFSNTIHKNLV----------TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
R TIH L+ ++ + + + + A +LFD+M +R+ ++WN ++
Sbjct: 3 RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 107 GYLHNSMVEEASKLFDVM-----PERDNFSWALMITCYTRKGKLEKAR---ELLELVPDK 158
L + E+A +LF M D+ L+ C ++G E + +L L +
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
S C NS+I Y++ G+ + KVFN M ++L S+NS+L+ YT+ G + A+ ++M
Sbjct: 123 NVSMC-NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 219 A----EKNVVSWNLMVSGFVNSG-------------------DLSSARQLFEKIPNPNAV 255
+ ++V+WN ++SG+ + G SS L + + P +
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 256 S--------------W------VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
W T++ + + G + AR +FD M KN+V+WN++++
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 296 AQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE- 350
+ + +A L I++ + D ++W+++ +GY +GK ++A +V +M K +A
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 351 ---TALMSGLIQTGRVDEASKMFNQL---------STRDTICWNSMIAGFCQSGRMDEAL 398
TA+ SG + G A K+F ++ +T T+ SG+
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
L + + V+ ++ Y ++G + SA IF ++ +++ SWN ++ G+ +
Sbjct: 422 CLRKNLICDAYVA-TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEE 480
Query: 459 ALKSLVLMGREGKKPDQSTF 478
+ + +M G +PD TF
Sbjct: 481 GIAAFSVMLEAGMEPDAITF 500
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 203/434 (46%), Gaps = 62/434 (14%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ N+ NS+I ++++NGK+ +R++F+ M RNL SWN++++ Y V++A L D
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
M E+ L PD + WNS+++GYA KG DA
Sbjct: 180 EM-------------------------EICGLKPDIVT---WNSLLSGYASKGLSKDAIA 211
Query: 183 VFNLMPVKDL----VSYNSMLAGYTQNG--KMGLALH--FFEKMAEKNVVSWNLMVSGFV 234
V M + L S +S+L + G K+G A+H +V ++ ++
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNA 290
+G L AR +F+ + N V+W +++ G + + +A L M + + ++WN+
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 291 MIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
+ + YA + ++A+ + K+ K + VSW+ I +G + G A +V+ +M +
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 347 IAAETALMSGLIQT----GRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEAL 398
+ A MS L++ + ++ ++ IC +++ + +SG + A+
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLI-----TG 449
++F + K+ SWN M+ GYA G+ + F M E + +++ S++ +G
Sbjct: 452 EIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSG 511
Query: 450 FLQNSL-YFDALKS 462
+Q YFD ++S
Sbjct: 512 LVQEGWKYFDLMRS 525
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 215/484 (44%), Gaps = 81/484 (16%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----Q 95
N I+ + GK+E + +VF++ +NL ++NS++S + K G + DA L D+M +
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 96 RNLVSWNTMIAGYLHNSMVEEA-------------------SKLFDVMPE---------- 126
++V+WN++++GY + ++A S L + E
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 127 ----------RDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
D + +I Y + G L AR + +++ D WNS+++G +
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM-DAKNIVAWNSLVSGLSYACL 306
Query: 177 FSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNL 228
DAE + M + D +++NS+ +GY GK AL KM EK NVVSW
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTML----CGFARH-GKITEARRLFDS 279
+ SG +G+ +A ++F K+ PNA + T+L C H GK L +
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVY 339
+ C V+ A++ Y + + A+++F + +K SW+ ++ GY G+ +E +
Sbjct: 427 LICDAYVA-TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 340 NQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI------CWNSMIAG 387
+ M P D T+++S +G V E K F+ + +R I C + M+
Sbjct: 486 SVMLEAGMEP--DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC-SCMVDL 542
Query: 388 FCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE---NIFQAMEERNIVSW 443
+SG +DEA D + M K ++ W +S ++ AE Q +E N ++
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 444 NSLI 447
+I
Sbjct: 603 MMMI 606
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 200/476 (42%), Gaps = 77/476 (16%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
HL KLGK + N + ++ ++I ++ K G + AR +FD M +N+V+WN++
Sbjct: 240 HL-KLGKAIHGY-ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 105 IAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK-- 158
++G + ++++A L M + D +W + + Y GK EKA +++ + +K
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 159 -LESACWNSVIAGYAKKGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLA 211
W ++ +G +K G F +A KVF M P +S + G G
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVN----SGDLSSARQLFEKIPNPNAVSWVTMLCGFARH 267
+H F KN++ + + V+ SGDL SA ++F I N + SW ML G+A
Sbjct: 418 VHGF--CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 268 GKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST 321
G+ E F M P + +++ ++++ + E K F
Sbjct: 476 GRGEEGIAAFSVMLEAGMEP--DAITFTSVLSVCKNSGLVQEGWKYF------------- 520
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTIC 380
D R Y +P I + ++ L ++G +DEA +S + D
Sbjct: 521 -----------DLMRSRYGIIPT--IEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATI 567
Query: 381 WNSMIAGFCQSGRMDEALDL----FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
W + ++ C+ R E ++ + + NS ++ MI+ Y+ + + E I M
Sbjct: 568 WGAFLSS-CKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 626
Query: 437 E-----RNIVSW---NSLITGFL--------QNSLYFDALKSLVLMGREGKKPDQS 476
+++ SW + + F + +YF+ K + M + G PD S
Sbjct: 627 NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTS 682
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 332 bits (851), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 235/813 (28%), Positives = 388/813 (47%), Gaps = 117/813 (14%)
Query: 41 QQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
Q + LGK + F T N ++ V+ + A +FDKM R++VS
Sbjct: 61 QGALELGKQAHAHMIISGFRPTT----FVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVS 116
Query: 101 WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGK--------LEKARELL 152
WN MI GY ++ + +A+ F++MP RD SW M++ Y + G+ ++ RE +
Sbjct: 117 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 153 EL----------VPDKLES--------------ACWNSVIAG------YAKKGQFSDAEK 182
E V LE C V+A YAK +F ++ +
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWNLMVSGFVNSGDLSS 241
VF +P K+ VS+++++AG QN + LAL FF++M + N VS ++ S + LS
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 242 AR---QLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
R QL + + L +A+ + +A+ LFD+ N S+NAMI
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 295 YAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
Y+Q+ +A+ LF +L D +S S + V L E ++Y ++ +
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 351 TALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ + I + + EA ++F+++ RD + WN++IA Q+G+ E L LF M +
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 407 K--------------------------------------NSVSWNTMISGYAQAGQMDSA 428
NS ++I Y++ G ++ A
Sbjct: 477 SRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 429 ENI----FQ------AMEERN----------IVSWNSLITGFLQNSLYFDALKSLVLMGR 468
E I FQ MEE VSWNS+I+G++ DA M
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
G PD+ T+ +G Q+H ++K +D+++ + L+ MY+KCG +
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 656
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+ +F D ++WN++I GYA +G EA + F++M+ E + P+ VTFI +L AC+H
Sbjct: 657 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
GL ++GL+ F M D+ ++P HYS +VD+LG+ G+++ A ++R M +A+ +W
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWR 776
Query: 649 SLLGACRVHK-NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
+LLG C +H+ N+E+ E A L L+P ++S Y LSN++A+AG WE+V LR MR
Sbjct: 777 TLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGF 836
Query: 708 RAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
+ K PGCSW+E+++++ FL D R E I
Sbjct: 837 KLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 35/275 (12%)
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ--TGRVD--EASKMFNQ 372
++S + + G L+ ++ + M T +++ L+Q T D AS +F++
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
+ RD + WN MI G+ +S M +A F MP ++ VSWN+M+SGY
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY------------- 155
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
LQN +++ V MGREG + D TF
Sbjct: 156 ------------------LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTS 197
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G Q+H +++ G D+ ++AL+ MYAK R + +VF I + +SW+++I+G
Sbjct: 198 LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
N A K FK+M Q + +L +C+
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 329 bits (843), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 210/754 (27%), Positives = 378/754 (50%), Gaps = 81/754 (10%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--NLVSWNTMIAGYLHNSMVEEAS 118
N+I + T ++ ++A G SD ++F ++ R ++ WN++I+ ++ N ++ +A
Sbjct: 64 NSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQAL 123
Query: 119 KL------FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC----WNSVI 168
F V P+ F L+ C K K + L L C +S+I
Sbjct: 124 AFYFKMLCFGVSPDVSTFP-CLVKACVALKNF--KGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVV 224
Y + G+ K+F+ + KD V +N ML GY + G + + F M N V
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV--------TMLCGFARHGKITEARRL 276
+++ ++S + + QL + VS V ++L +++ G+ +A +L
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLV----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKL 332
F M + V+WN MI+ Y Q ++E++ F ++ D +++S+++ + L
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 333 DEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+ ++++ + I+ + L S LI + V A +F+Q ++ D + + +MI+G+
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 389 CQSGRMDEALDLFRQMPK----KNSVSWNTM----------------------------- 415
+G ++L++FR + K N ++ ++
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC 476
Query: 416 ------ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
I YA+ G+M+ A IF+ + +R+IVSWNS+IT Q+ A+ MG
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G D + G +H +++K +D++ + LI MYAKCG +++A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSH 588
VF ++ +++SWNS+I+ +G ++ F +M+ + + PDQ+TF+ ++S+C H
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
G ++G+ F+ M ED+ I+P EHY+C+VDL GR GRL EA+ V+ M +AG+WG
Sbjct: 657 VGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWG 716
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
+LLGACR+HKN+E+ E A+ +L +L+P N+ Y+ +SN HA A WE V ++R LM+++
Sbjct: 717 TLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKERE 776
Query: 709 AGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
K+PG SWIE+ + F+S D PE+ I
Sbjct: 777 VQKIPGYSWIEINKRTHLFVSGDVN--HPESSHI 808
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/489 (19%), Positives = 207/489 (42%), Gaps = 104/489 (21%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMI 105
GK++ ++F + K+ V +N M++ +AK G + + F M N V+++ ++
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 106 A--------------------------GYLHNSMV---------EEASKLFDVMPERDNF 130
+ G + NS++ ++ASKLF +M D
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306
Query: 131 SWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSDAEKVF 184
+W MI+ Y + G +E++ ++PD + ++S++ +K +++
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT---FSSLLPSVSKFENLEYCKQIH 363
Query: 185 NLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG--- 237
+ D+ ++++ Y + + +A + F + +VV + M+SG++++G
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 238 -DLSSARQLFEKIPNPNAVSWVTML-------------------------------CG-- 263
L R L + +PN ++ V++L C
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 264 --FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGV 317
+A+ G++ A +F+ + +++VSWN+MI AQ A+ +F ++ D V
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQL 373
S S ++ + + ++ M D+ +E+ L+ + G + A +F +
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-----NSVSWNTMISGYAQAGQMDSA 428
++ + WNS+IA G++ ++L LF +M +K + +++ +IS G +D
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 429 ENIFQAMEE 437
F++M E
Sbjct: 664 VRFFRSMTE 672
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 149/342 (43%), Gaps = 56/342 (16%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ ++I ++ +++I + K +S A+ +F + + ++V + MI+GYLHN + ++
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 118 SKLF----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK-LESAC--WNSVIAG 170
++F V + + ++ L+ REL + K ++ C +VI
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----------- 219
YAK G+ + A ++F + +D+VS+NSM+ Q+ A+ F +M
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 220 ----------------------------EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
+V S + ++ + G+L +A +F+ +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVK 306
N VSW +++ HGK+ ++ LF M K + +++ +I++ +DE V+
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 307 LFIKLPHKDGVS-----WSTIINGYIRVGKLDEAREVYNQMP 343
F + G+ ++ +++ + R G+L EA E MP
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I V++++ I K G ++ A+ VF KN+V++NS+I+ +GK+
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKL 624
Query: 84 SDARQLFDKMSQR-----NLVSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNFS 131
D+ LF +M ++ + +++ +I+ H V+E + F M P++++
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH-- 682
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG 170
+A ++ + R G+L +A E ++ +P ++ W +++
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC--VDLISWNSLISGY 551
G Q+H +++ + D + ++ MYA CG ++F ++ + WNS+IS +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN-QGLDLFKCMVEDFAIEP 610
NG +A + +ML V PD TF ++ AC L N +G+D V ++
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC--VALKNFKGIDFLSDTVSSLGMDC 171
Query: 611 LAEHYSCLVDLLGRMGRLE---EAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEF 665
S L+ G+++ + F+ V ++ + +W +L L+ I F
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRV----LQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 666 AAMRLSELEPHNASNYITLS 685
+ MR+ ++ P+ + LS
Sbjct: 228 SVMRMDQISPNAVTFDCVLS 247
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 264/446 (59%), Gaps = 4/446 (0%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC--KD 346
N +I Y + + + ++F ++P +D VS++++I+GY++ G + ARE+++ MP K+
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 347 IAAETALMSGLIQTGR-VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+ + +++SG QT VD ASK+F + +D I WNSMI G+ + GR+++A LF MP
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+++ V+W TMI GYA+ G + A+ +F M R++V++NS++ G++QN + +AL+
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339
Query: 466 MGREGKK-PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
M +E PD +T +H YI++ + + ALI MY+KCG
Sbjct: 340 MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCG 399
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
++ A VF IE + WN++I G A++G AF Q+ + PD +TF+G+L+
Sbjct: 400 SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLN 459
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA 644
ACSH+GL +GL F+ M IEP +HY C+VD+L R G +E A N++ M V+ N
Sbjct: 460 ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPND 519
Query: 645 GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+W + L AC HK E GE A L +N S+Y+ LSNM+A G W++V R+R +M
Sbjct: 520 VIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMM 579
Query: 705 RDKRAGKLPGCSWIEVQNQIQCFLSD 730
++++ K+PGCSWIE+ ++ F D
Sbjct: 580 KERKIEKIPGCSWIELDGRVHEFFVD 605
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 176/328 (53%), Gaps = 17/328 (5%)
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
D F +I Y + G L +R++ + +P K +S +NS+I GY K G A ++F+LM
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMP-KRDSVSYNSMIDGYVKCGLIVSARELFDLM 213
Query: 188 PV--KDLVSYNSMLAGYTQNGK-MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
P+ K+L+S+NSM++GY Q + +A F M EK+++SWN M+ G+V G + A+
Sbjct: 214 PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKG 273
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
LF+ +P + V+W TM+ G+A+ G + A+ LFD MP ++VV++N+M+A Y Q+ EA
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 305 VKLFIKLPHK-----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI- 358
+++F + + D + ++ ++G+L +A +++ + K L LI
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALID 393
Query: 359 ---QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVS 411
+ G + A +F + + WN+MI G G + A D+ Q+ K + ++
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERN 439
+ +++ + +G + F+ M ++
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKH 481
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 194/399 (48%), Gaps = 44/399 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD--KMSQRNLVSWNTMI 105
K G + + ++F ++ V+YNSMI + K G I AR+LFD M +NL+SWN+MI
Sbjct: 168 KCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMI 227
Query: 106 AGYLHNS-MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACW 164
+GY S V+ ASKLF MPE+D SW MI Y + G++E A+ L +++P + + W
Sbjct: 228 SGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-DVVTW 286
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
++I GYAK G A+ +F+ MP +D+V+YNSM+AGY QN AL F M +++ +
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 346
Query: 225 -----SWNLMVSGFVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARR 275
+ +++ G LS A + EK V ++ +++ G I A
Sbjct: 347 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAML 406
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGK 331
+F+ + K++ WNAMI A + A + +++ D +++ ++N G
Sbjct: 407 VFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+ E GL+ + K+ +L + M+ +S
Sbjct: 467 VKE---------------------GLLCFELMRRKHKIEPRLQH-----YGCMVDILSRS 500
Query: 392 GRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE 429
G ++ A +L +MP + N V W T ++ + + ++ E
Sbjct: 501 GSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 200/402 (49%), Gaps = 46/402 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+L N +I ++ K G + +RQ+FD+M +R+ VS+N+MI GY+ ++ A +LFD+MP
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 126 -ERDNF-SWALMITCYTRKGK-LEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
E N SW MI+ Y + ++ A +L +P+K + WNS+I GY K G+ DA+
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK-DLISWNSMIDGYVKHGRIEDAKG 273
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
+F++MP +D+V++ +M+ GY + G + A F++M ++VV++N M++G+V + A
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 243 RQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
++F + P+ + V +L A+ G++++A
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA------------------------ 369
Query: 298 DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
ID + + K + G +I+ Y + G + A V+ + K I A++ GL
Sbjct: 370 ---IDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 426
Query: 358 IQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-- 411
G + A M Q+ D I + ++ SG + E L F M +K+ +
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 486
Query: 412 ---WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITG 449
+ M+ +++G ++ A+N+ + M E N V W + +T
Sbjct: 487 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 21/335 (6%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
K + + N I K G++E+A +F +++VT+ +MI +AK G + A+ LFD+M
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM 309
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER-----DNFSWALMITCYTRKGKLEKA 148
R++V++N+M+AGY+ N EA ++F M + D+ + +++ + G+L KA
Sbjct: 310 PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 149 RELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
++ + +K L ++I Y+K G A VF + K + +N+M+ G +
Sbjct: 370 IDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIH 429
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVN----SGDLSSARQLFEKIPN-----PNAVS 256
G A ++ ++ ++ G +N SG + FE + P
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 489
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKLP 312
+ M+ +R G I A+ L + MP + N V W + A + ++ + E V K I
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 549
Query: 313 HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
+ S+ + N Y G + R V M + I
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKI 584
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H ++ K+G +DLF+ N LI +Y KCG + + Q+F + D +S+NS+I GY
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G + A + F M E + + +++ M+S + + G+D+ + D + L
Sbjct: 200 CGLIVSARELFDLMPME--MKNLISWNSMISGYAQ---TSDGVDIASKLFADMPEKDLIS 254
Query: 614 HYSCLVDLLGRMGRLEEA---FNVVRGMDV 640
++ ++D + GR+E+A F+V+ DV
Sbjct: 255 -WNSMIDGYVKHGRIEDAKGLFDVMPRRDV 283
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 193/720 (26%), Positives = 366/720 (50%), Gaps = 65/720 (9%)
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELLELVP 156
N I ++ EA + FD + +F ++ +I + L + R++ + +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 157 D---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ K ++ N +++ Y K G DA +VF+ MP ++LVSY S++ GY+QNG+ A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 214 FFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFA 265
+ KM ++++V ++ ++ +S D+ +QL ++ + + ++ ++ +
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD-------LQIDEAVKLFIKLPHK---- 314
R ++++A R+F +P K+++SW+++IA ++Q + E + + P++
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 315 -----------------------------DGVSWSTIINGYIRVGKLDEAREVYNQMPCK 345
+ ++ ++ + Y R G L+ AR V++Q+
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLF 401
D A+ +++GL G DEA +F+Q+ + D I S++ + + + + +
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 402 RQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEER-NIVSWNSLITGFLQNSLY 456
+ K + N++++ Y + N+F+ + VSWN+++T LQ+
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+ L+ LM +PD T ++G+Q+H Y LK+G + F+ N L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I MYAKCG + A ++F +++ D++SW++LI GYA +G+ EA FK+M S + P+
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF+G+L+ACSH GL +GL L+ M + I P EH SC+VDLL R GRL EA +
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M ++ + +W +LL AC+ N+ + + AA + +++P N++ ++ L +MHA +G WE
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRDKFN 756
LR M+ K+PG SWIE++++I F ++D + I +L I + + D+ N
Sbjct: 695 AALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECN 754
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 255/573 (44%), Gaps = 84/573 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVM 124
N ++S++ K G + DAR++FD M +RNLVS+ ++I GY N EA +L+ D++
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA----CWNSVIAGYAKKGQFSDA 180
P D F++ +I + ++L V KLES+ N++IA Y + Q SDA
Sbjct: 166 P--DQFAFGSIIKACASSSDVGLGKQLHAQVI-KLESSSHLIAQNALIAMYVRFNQMSDA 222
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
+VF +P+KDL+S++S++AG++Q G AL ++M V N + G L
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG----SSLK 278
Query: 241 SARQLFEKIPN---------------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
+ L P+ NA++ ++ +AR G + ARR+FD + +
Sbjct: 279 ACSSLLR--PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQ 341
SWN +IA A + DEAV +F ++ D +S +++ + L + ++++
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 342 MP----CKDIAAETALMSGLIQTGRVDEASKMFNQL-STRDTICWNSMIAGFCQSGRMDE 396
+ D+ +L++ + +F + D++ WN+++ Q + E
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 397 ALDLFRQM------PKKNSVS---------------------------------WNTMIS 417
L LF+ M P ++ N +I
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA+ G + A IF +M+ R++VSW++LI G+ Q+ +AL M G +P+ T
Sbjct: 517 MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVT 576
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
F + G +L+ + + G + ++ + A+ GR+ AE+ +
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM 636
Query: 537 EC-VDLISWNSLISGYALNGYAIEAFKAFKQML 568
+ D++ W +L+S G A KA + +L
Sbjct: 637 KLEPDVVVWKTLLSACKTQGNVHLAQKAAENIL 669
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 203/737 (27%), Positives = 369/737 (50%), Gaps = 92/737 (12%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
KN+ +NS+I F+KNG +A + + K+ + + Y S+++ + LFD
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP-----DKYTFPSVIKACAGLFDA- 122
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKL-----ESACW--NSVIAGYAKKGQF 177
E+ +LV +++ ES + N+++ Y++ G
Sbjct: 123 -------------------------EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLL 157
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS- 236
+ A +VF+ MPV+DLVS+NS+++GY+ +G AL + ++ +V + VS + +
Sbjct: 158 TRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 237 GDLSSARQ-------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
G+L +Q + N V ++ + + + T+ARR+FD M ++ VS+N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPHK---DGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
MI Y + ++E+V++F++ + D ++ S+++ + L A+ +YN M
Sbjct: 278 TMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 347 IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
E+ + + LI + G + A +FN + +DT+ WNS+I+G+ QSG + EA+ LF+
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 403 QM----PKKNSVSW-----------------------------------NTMISGYAQAG 423
M + + +++ N +I YA+ G
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
++ + IF +M + V+WN++I+ ++ + L+ M + PD +TF
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
++G ++H +L+ GY ++L + NALI MY+KCG +E++ +VF + D+++
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
W +I Y + G +A + F M +VPD V FI ++ ACSH+GL ++GL F+ M
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIG 663
+ I+P+ EHY+C+VDLL R ++ +A ++ M +K +A +W S+L ACR ++E
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 664 EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQ 723
E + R+ EL P + I SN +A +W++V +R ++DK K PG SWIEV
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Query: 724 IQCFLSDDSGRLRPETI 740
+ F S D + E I
Sbjct: 758 VHVFSSGDDSAPQSEAI 774
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 259/544 (47%), Gaps = 58/544 (10%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSAR 243
P K++ +NS++ +++NG AL F+ K+ E V ++ ++ D
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 244 QLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
++E+I + S + ++ ++R G +T AR++FD MP +++VSWN++I+ Y+
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 300 QIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVY----NQMPCKDIAAET 351
+EA++++ +L + D + S+++ + + + + + ++ +
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ-----MPK 406
L++ ++ R +A ++F+++ RD++ +N+MI G+ + ++E++ +F + P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPD 306
Query: 407 KNSVS---------------------------------WNTMISGYAQAGQMDSAENIFQ 433
+VS N +I YA+ G M +A ++F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
+ME ++ VSWNS+I+G++Q+ +A+K +M ++ D T+ +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G LH +KSG DL VSNALI MYAKCG V + ++F+++ D ++WN++IS
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G + QM EVVPD TF+ L C+ G ++ C++ F E +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQ 545
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLS 671
+ L+++ + G LE + V M + + W ++ A ++ E + FA M S
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 672 ELEP 675
+ P
Sbjct: 605 GIVP 608
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G +E + RVF +++VT+ MI + G+ A + F M + +V
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 100 S----WNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
+ +I H+ +V+E F+ M +A ++ +R K+ KA E
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
++ +P K +++ W SV+ G AE+V
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 219/803 (27%), Positives = 394/803 (49%), Gaps = 86/803 (10%)
Query: 27 TIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTY---------NSMISVF 77
TIG I G+ F + Q+ + + + + N +H ++ + N +I+++
Sbjct: 38 TIG-IRGRREFARLLQL-------RASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLY 89
Query: 78 AKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDNFSWALMI 136
++ G + AR++F+KM +RNLVSW+TM++ H+ + EE+ +F + R + ++
Sbjct: 90 SRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYIL 149
Query: 137 TCYTRKGKLEKARE---LLELVPDKLESACWNSVIAG------YAKKGQFSDAEKVFNLM 187
+ + + R + +L ++S V G Y K G A VF+ +
Sbjct: 150 SSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL 209
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD----LSSAR 243
P K V++ +M++G + G+ ++L F ++ E NVV ++S +++ L +
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 244 QLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
Q+ I +A ++ + + G++ A +LF+ MP KN++SW +++ Y Q+
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 300 QIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
EA++LF + D + S+I+ + L +V+ ++ ++ + +
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 356 GLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG---RMDEALDLFRQMPKK- 407
LI + + +A K+F+ + D + +N+MI G+ + G + EAL++FR M +
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 408 ------------------NSVSWNTMISG-----------YAQAGQMDSAEN-------- 430
S+ + I G +A + +D N
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 431 -IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+F M+ +++V WNS+ G++Q S +AL + + ++PD+ TF
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
Q+G + H +LK G + +++NAL+ MYAKCG E A + F + D++ WNS+IS
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
YA +G +A + ++M+SE + P+ +TF+G+LSACSHAGL GL F+ M+ F IE
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIE 688
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P EHY C+V LLGR GRL +A ++ M K A +W SLL C N+E+ E AA
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 670 LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS 729
+P ++ ++ LSN++A G W E +++R M+ + K PG SWI + ++ FLS
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808
Query: 730 DDSGRLRPETIQIILIGISADIR 752
D + I +L + IR
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 175/428 (40%), Gaps = 92/428 (21%)
Query: 15 HKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMI 74
H + + H TI + G + N I K + +A +VF ++V +N+MI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 75 SVFAKNG---KISDARQLFDKMSQR----------------------------------- 96
+++ G ++ +A +F M R
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY 483
Query: 97 ----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL- 151
++ + + +I Y + ++++ +FD M +D W M Y ++ + E+A L
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 152 LELV-----PDKL-------------------ESACW-------------NSVIAGYAKK 174
LEL PD+ E C N+++ YAK
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKC 603
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMV 230
G DA K F+ +D+V +NS+++ Y +G+ AL EKM E N +++ ++
Sbjct: 604 GSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVL 663
Query: 231 SGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN-V 285
S ++G + + FE + P +V M+ R G++ +AR L + MP K
Sbjct: 664 SACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 286 VSWNAMIA--AYAQDLQIDE-AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+ W ++++ A A ++++ E A ++ I KD S++ + N Y G EA++V +M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 343 PCKDIAAE 350
+ + E
Sbjct: 784 KVEGVVKE 791
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 243/418 (58%), Gaps = 2/418 (0%)
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+G + A +V+ +M K++ T++++G + + A + F+ RD + WN+MI+G+
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
+ G M EA LF QMP ++ +SWNT++ GYA G M++ E +F M ERN+ SWN LI
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIK 160
Query: 449 GFLQNSLYFDALKSLVLMGREGKK-PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
G+ QN + L S M EG P+ +T G +H+Y GY
Sbjct: 161 GYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYN 220
Query: 508 N-DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
D+ V NALI MY KCG +E A +VF I+ DLISWN++I+G A +G+ EA F +
Sbjct: 221 KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHE 280
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M + + PD+VTF+G+L AC H GL GL F M DF+I P EH C+VDLL R G
Sbjct: 281 MKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAG 340
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
L +A + M VKA+A +W +LLGA +V+K ++IGE A L +LEP N +N++ LSN
Sbjct: 341 FLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSN 400
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
++ +AGR+++ RL+V MRD K G SWIE + + F S R E +Q IL
Sbjct: 401 IYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRIL 458
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 18/248 (7%)
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
G + A KVF M K++V + SM+ GY N + A +F+ E+++V WN M+SG++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
G++ AR LF+++P + +SW T+L G+A G + R+FD MP +NV SWN +I
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 295 YAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREV--------YNQ 341
YAQ+ ++ E + F ++ + V + + +++ ++G D + V YN+
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ D+ + AL+ + G ++ A ++F + RD I WN+MI G G EAL+LF
Sbjct: 222 V---DVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Query: 402 RQMPKKNS 409
+M KNS
Sbjct: 279 HEM--KNS 284
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 90/435 (20%)
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW 319
MLC G I A ++F M KNVV W +MI Y + + A + F P +D V W
Sbjct: 37 MLC---LMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+T+I+GYI +G + EAR +++QMPC+D+ + ++ G G ++ ++F+ + R+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNSV-----------------------SW---- 412
WN +I G+ Q+GR+ E L F++M + SV W
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 413 --------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
N +I Y + G ++ A +F+ ++ R+++SWN++I G + +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNAL 516
AL M G PD+ TF H +++ G Y N +F ++
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACK-----------HMGLVEDGLAYFNSMFTDFSI 322
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ CG V VDL+S G+ +A + +M V D
Sbjct: 323 MPEIEHCGCV------------VDLLS---------RAGFLTQAVEFINKM---PVKADA 358
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDF-AIEPL-AEHYSCLVDLLGRMGRLEEAFNV 634
V + +L A + +D+ + +E+ +EP ++ L ++ G GR ++A +
Sbjct: 359 VIWATLLGASK----VYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARL 414
Query: 635 ---VRGMDVKANAGL 646
+R K AG+
Sbjct: 415 KVAMRDTGFKKEAGV 429
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 175/384 (45%), Gaps = 57/384 (14%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
+G + A +VF + KN+V + SMI+ + N + AR+ FD +R++V WNTMI+GY
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVI 168
+ + EA LFD MP RD SW ++ Y G +E + + +P++ WN +I
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER-NVFSWNGLI 159
Query: 169 AGYAKKGQFSDAEKVFNLMPVK-------------------------------------- 190
GYA+ G+ S+ F M +
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 191 ---DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
D+ N+++ Y + G + +A+ F+ + ++++SWN M++G G + A LF
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 248 KIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQ--- 300
++ N P+ V++V +LC G + + F+SM + DL
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 301 --IDEAVKLFIKLPHK-DGVSWSTIING---YIRVGKLDEAREVYNQMPCKDIAAETALM 354
+ +AV+ K+P K D V W+T++ Y +V + A E ++ ++ A L
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Query: 355 SGLIQTGRVDEASKMFNQLSTRDT 378
+ GR D+A+++ +++ RDT
Sbjct: 400 NIYGDAGRFDDAARL--KVAMRDT 421
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 204/710 (28%), Positives = 344/710 (48%), Gaps = 106/710 (14%)
Query: 139 YTRKGKLEKARELLELVPDK--LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
+ G LE A +LL V K ++ SV+ A D ++V N + V +
Sbjct: 71 FCESGNLENAVKLL-CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDS 129
Query: 197 SMLAG----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP 252
++ + YT G + A F+++ + + WN++++ SGD S + LF+K+ +
Sbjct: 130 NLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189
Query: 253 NA-VSWVTMLC-------------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
+ T C G HG I ++ +N V N+++A Y ++
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-----GFGERNSVG-NSLVAFYLKN 243
Query: 299 LQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM---- 354
++D A K+F ++ +D +SW++IINGY+ G ++ V+ QM I + A +
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 355 -----SGLIQTGR------------------------------VDEASKMFNQLSTRDTI 379
S LI GR +D A +F ++S R +
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMP---------------------------------- 405
+ SMIAG+ + G EA+ LF +M
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 406 KKNSVSWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
K+N + ++ +S YA+ G M AE +F M ++I+SWN++I G+ +N +AL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 461 KSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
L+ E + PD+ T G ++H YI+++GY +D V+N+L+ M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
YAKCG + A +F I DL+SW +I+GY ++G+ EA F QM + D+++F
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +L ACSH+GL ++G F M + IEP EHY+C+VD+L R G L +A+ + M
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+ +A +WG+LL CR+H ++++ E A ++ ELEP N Y+ ++N++AEA +WE+V+R
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISA 749
LR + + K PGCSWIE++ ++ F++ DS E I+ L + A
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 773
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 195/394 (49%), Gaps = 30/394 (7%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDN 129
NS+++ + KN ++ AR++FD+M++R+++SWN++I GY+ N + E+ +F ++
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKLESACW-------NSVIAGYAKKGQFSDAEK 182
A +++ + + L V AC+ N+++ Y+K G A+
Sbjct: 294 IDLATIVSVFAGCAD-SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD---- 238
VF M + +VSY SM+AGY + G G A+ FE+M E+ + V+ +N
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 239 LSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
L +++ E I + + ++ +A+ G + EA +F M K+++SWN +I
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 295 YAQDLQIDEAVKLF-IKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
Y+++ +EA+ LF + L K D + + ++ + D+ RE++ + +
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 350 ETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+ + + L+ + G + A +F+ ++++D + W MIAG+ G EA+ LF QM
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 406 K----KNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+ + +S+ +++ + +G +D F M
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 215/491 (43%), Gaps = 65/491 (13%)
Query: 51 KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH 110
+V+ +R I NL + S++ + G + +A ++FD++ + WN ++
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 111 NSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVPDK---LESAC 163
+ + LF M E D+++++ + ++ + +L + ++
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
NS++A Y K + A KVF+ M +D++S+NS++ GY NG L F +M +
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 224 -VSWNLMVSGFVNSGD--LSSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARR 275
+ +VS F D L S + I S C +++ G + A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGK 331
+F M ++VVS+ +MIA YA++ EAVKLF ++ + D + + ++N R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 332 LDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
LDE + V+ + DI ALM + G + EA +F+++ +D I WN++I G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 388 FCQSGRMDEALDLF-------RQMPKKNSVSW---------------------------- 412
+ ++ +EAL LF R P + +V+
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 413 -----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
N+++ YA+ G + A +F + +++VSW +I G+ + +A+ M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 468 REGKKPDQSTF 478
+ G + D+ +F
Sbjct: 593 QAGIEADEISF 603
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 194/451 (43%), Gaps = 71/451 (15%)
Query: 27 TIGSIGGKHVFNKNQQIIH-----LGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+ SIG K F++ + + K G ++ A VF +++V+Y SMI+ +A+ G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR 141
+A +LF++M + + D ++ ++ C R
Sbjct: 377 LAGEAVKLFEEMEEEGISP---------------------------DVYTVTAVLNCCAR 409
Query: 142 KGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
L++ + + E + + + N+++ YAK G +AE VF+ M VKD++S+N++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWN-----LMVSGFVNSGDLSSARQLFEKIPNPN 253
+ GY++N AL F + E+ S + ++ + R++ I
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 254 -------AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
A S V M +A+ G + A LFD + K++VSW MIA Y EA+
Sbjct: 530 YFSDRHVANSLVDM---YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 307 LFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQM--PCK---DIAAETALMSGL 357
LF ++ D +S+ +++ G +DE +N M CK + ++ L
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 358 IQTGRVDEASKMFNQLS-TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-------NS 409
+TG + +A + + D W +++ G R+ + L ++ +K N+
Sbjct: 647 ARTGDLIKAYRFIENMPIPPDATIWGALLCGC----RIHHDVKLAEKVAEKVFELEPENT 702
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+ M + YA+A + + + + + + +R +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 30/318 (9%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G +F N + K G ++EA VFS K+++++N++I ++KN ++A LF+
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 93 MSQRNLVSWN-----TMIAGYLHNSMVEEASKLFDVMPERDNFS----WALMITCYTRKG 143
+ + S + ++ S ++ ++ + FS ++ Y + G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 144 KLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSML 199
L A L + + K + W +IAGY G +A +FN M D +S+ S+L
Sbjct: 549 ALLLAHMLFDDIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 200 AGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPN 253
+ +G + FF M E V + +V +GDL A + E +P P+
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 667
Query: 254 AVSWVTMLCGFARHG--KITE--ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
A W +LCG H K+ E A ++F+ P +N + M YA+ + ++ +L
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEP-ENTGYYVLMANIYAEAEKWEQVKRLRK 726
Query: 310 KLPHK-----DGVSWSTI 322
++ + G SW I
Sbjct: 727 RIGQRGLRKNPGCSWIEI 744
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/663 (29%), Positives = 321/663 (48%), Gaps = 122/663 (18%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D N ++ + G++ A +++M KN VS N M+SG V +GD+SSAR LF+ +P
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM------------------P-CKNVVSWNA- 290
+ V+W ++ +AR+ EA +LF M P C + V NA
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 291 -----------------------MIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYI 327
++ +Y + ++D A LF ++P KD V+++T+I GY
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 328 RVGKLDEAREVYNQM------PC--------------KDIAAETALMSGLIQTG------ 361
+ G E+ ++ +M P D A L + + TG
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 362 -------------RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
RV E +F+++ D + +N +I+ + Q+ + + +L FR+M
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 405 ------PKKNSVS-----------------------------WNTMISGYAQAGQMDSAE 429
P +S N+++ YA+ + AE
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
IF+++ +R VSW +LI+G++Q L+ LK M + DQSTF
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G QLH +I++SG + ++F + L+ MYAKCG ++ A QVF + + +SWN+LIS
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
+A NG A AF +M+ + PD V+ +G+L+ACSH G QG + F+ M + I
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P +HY+C++DLLGR GR EA ++ M + + +W S+L ACR+HKN + E AA +
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 670 LSELEP-HNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
L +E +A+ Y+++SN++A AG WE+V ++ MR++ K+P SW+EV ++I F
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFS 706
Query: 729 SDD 731
S+D
Sbjct: 707 SND 709
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/639 (23%), Positives = 273/639 (42%), Gaps = 92/639 (14%)
Query: 46 LGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
L + G+V A +V+ HKN V+ N+MIS K G +S AR LFD M R +V+W ++
Sbjct: 58 LLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 106 AGYLHNSMVEEASKLFDVM--------PERDNFSWALMITC-----YTRKGKLEKARELL 152
Y NS +EA KLF M P+ F+ L+ C G++ L
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT-TLLPGCNDAVPQNAVGQVHAFAVKL 176
Query: 153 ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ + N ++ Y + + A +F +P KD V++N+++ GY ++G ++
Sbjct: 177 GFDTNPFLTVS-NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWVT--------- 259
H F KM + + SG + + D + +QL +A+S T
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL-------HALSVTTGFSRDASVG 288
Query: 260 --MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----H 313
+L +++H ++ E R LFD MP + VS+N +I++Y+Q Q + ++ F ++
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQ--MPCKD--IAAETALMSGLIQTGRVDEASKM 369
+ ++T+++ + L R+++ Q + D + +L+ + +EA +
Sbjct: 349 RRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN--------------SVSWNTM 415
F L R T+ W ++I+G+ Q G L LF +M N S S+ ++
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Query: 416 ISG-------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
+ G YA+ G + A +F+ M +RN VSWN+LI+
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAH 528
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
N A+ + M G +PD + + G EY I +
Sbjct: 529 ADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT---EYFQAMSPIYGI 585
Query: 511 FVSN----ALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFK 565
++ + + GR AE++ + D I W+S+++ ++ A +A +
Sbjct: 586 TPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAE 645
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
++ S E + D ++ M + + AG + D+ K M E
Sbjct: 646 KLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 219/481 (45%), Gaps = 50/481 (10%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+H LG+ A+ V + ++ N ++ ++K+ ++ + R LFD+M + + VS+N
Sbjct: 263 LHDFALGQQLHALSV-TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 104 MIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL----LELV 155
+I+ Y E + F M +R NF +A M++ L+ R+L L
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 156 PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
D + NS++ YAK F +AE +F +P + VS+ ++++GY Q G G L F
Sbjct: 382 ADSILHV-GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 216 EKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARH 267
KM N+ ++ ++ + L +QL I N S ++ +A+
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTII 323
G I +A ++F+ MP +N VSWNA+I+A+A + + A+ F K+ D VS ++
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 324 NGYIRVGKLDEAREVYNQM-PCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR-D 377
G +++ E + M P I + ++ L + GR EA K+ +++ D
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 378 TICWNSMIAGFC-----QSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
I W+S++ C QS A LF +++ ++ +M + YA AG+ + ++
Sbjct: 621 EIMWSSVLNA-CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 433 QAMEERNI-----VSW---NSLITGFLQNSLYFDALKSLVL--------MGREGKKPDQS 476
+AM ER I SW N I F N +V + REG KPD S
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 477 T 477
+
Sbjct: 740 S 740
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 357 LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
+ T RVD +++ DT N ++ + G++ A ++ +MP KN+VS NTMI
Sbjct: 29 FLDTRRVD--ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK--KPD 474
SG+ + G + SA ++F AM +R +V+W L+ + +NS + +A K M R PD
Sbjct: 87 SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF--VSNALIAMYAKCGRVESAEQV 532
TF Q+H + +K G+ + F VSN L+ Y + R++ A +
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
F I D +++N+LI+GY +G E+ F +M P TF G+L A
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I S ++VF+ + + K G +++AV+VF +N V++N++IS A NG
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYL----HNSMVEEASKLFDVM-------PERDNFSW 132
A F KM + L + I G L H VE+ ++ F M P++ + +
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH--Y 592
Query: 133 ALMITCYTRKGKLEKARELLELVPDKLESACWNSVI-AGYAKKGQF---SDAEKVFNLMP 188
A M+ R G+ +A +L++ +P + + W+SV+ A K Q AEK+F++
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 189 VKDLVSYNSMLAGYTQNGK 207
++D +Y SM Y G+
Sbjct: 653 LRDAAAYVSMSNIYAAAGE 671
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/633 (29%), Positives = 319/633 (50%), Gaps = 82/633 (12%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF--------------- 246
Y G + LA H F+ + ++V +WNLM+SG+ +G+ S + F
Sbjct: 96 YCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRT 155
Query: 247 --------EKIPNPNAVSWVTMLCGF--------------ARHGKITEARRLFDSMPCKN 284
+ + N + + + GF +R+ + AR LFD MP ++
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
+ SWNAMI+ Y Q EA+ L L D V+ ++++ G + +++
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+ +E + + LI + GR+ + K+F+++ RD I WNS+I + + + A+ L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 401 FRQM------PKKNSV--------------------------SW--------NTMISGYA 420
F++M P ++ W N ++ YA
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFX 479
+ G +DSA +F + +++SWN++I+G+ QN +A++ +M EG+ +Q T+
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 480 XXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV 539
+ G +LH +LK+G D+FV +L MY KCGR+E A +F I V
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 540 DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
+ + WN+LI+ + +G+ +A FK+ML E V PD +TF+ +LSACSH+GL ++G F
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 600 KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKN 659
+ M D+ I P +HY C+VD+ GR G+LE A ++ M ++ +A +WG+LL ACRVH N
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Query: 660 LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
+++G+ A+ L E+EP + ++ LSNM+A AG+WE V+ +R + K K PG S +E
Sbjct: 636 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695
Query: 720 VQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
V N+++ F + + E + L + A ++
Sbjct: 696 VDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 217/507 (42%), Gaps = 97/507 (19%)
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDE 334
RL S +NV ++ Y + A F + ++D +W+ +I+GY R G E
Sbjct: 76 RLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSE 135
Query: 335 AREVY-----------------------------NQMPCK--------DIAAETALMSGL 357
+ N++ C D+ +L+
Sbjct: 136 VIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLY 195
Query: 358 IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL---FRQMPKKNSVSW-- 412
+ V A +F+++ RD WN+MI+G+CQSG EAL L R M VS
Sbjct: 196 SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLS 255
Query: 413 ------------------------------NTMISGYAQAGQMDSAENIFQAMEERNIVS 442
N +I YA+ G++ + +F M R+++S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WNS+I + N A+ M +PD T + + + L
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 503 KSG-YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
+ G ++ D+ + NA++ MYAK G V+SA VF + D+ISWN++ISGYA NG+A EA
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 562 KAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED------FAIEPLAEH 614
+ + M E E+ +Q T++ +L ACS AG QG+ L ++++ F + LA
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA-- 493
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL- 673
D+ G+ GRLE+A ++ + + N+ W +L+ H + GE A M E+
Sbjct: 494 -----DMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGH---GEKAVMLFKEML 544
Query: 674 ----EPHNASNYITLSNMHAEAGRWEE 696
+P + + ++TL + + +G +E
Sbjct: 545 DEGVKPDHIT-FVTLLSACSHSGLVDE 570
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 247/506 (48%), Gaps = 64/506 (12%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
S+I ++++ + +AR LFD+M R++ SWN MI+GY + +EA L + + D+ +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVT 249
Query: 132 WALMITCYTRKGKLEKARELLEL-VPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMP 188
+++ T G + + + LES + N +I YA+ G+ D +KVF+ M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQ 244
V+DL+S+NS++ Y N + A+ F++M + + ++ + S GD+ + R
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 245 L----------FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
+ E I NAV V M +A+ G + AR +F+ +P +V+SWN +I+
Sbjct: 370 VQGFTLRKGWFLEDITIGNAV--VVM---YAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 295 YAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMPCK---- 345
YAQ+ EA++++ + + + +W +++ + G L + +++ ++
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM- 404
D+ T+L + GR+++A +F Q+ +++ WN++IA G ++A+ LF++M
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 405 ---PKKNSVSWNTMISGYAQAGQMDSAENIFQAME-----ERNIVSWNSLI-----TGFL 451
K + +++ T++S + +G +D + F+ M+ ++ + ++ G L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-----SGY 506
+ +L F +KS+ L +PD S + +G E++ + GY
Sbjct: 605 ETALKF--IKSMSL------QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 507 INDLFVSNALIAMYAKCGRVESAEQV 532
+ +SN MYA G+ E +++
Sbjct: 657 --HVLLSN----MYASAGKWEGVDEI 676
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/587 (21%), Positives = 251/587 (42%), Gaps = 76/587 (12%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+N+ +++++ G ++ AR FD + R++ +WN MI+GY E + F +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 125 -------PERDNFSWALMITCYT--RKGKLEKARELLELVPDKLESACWNSVIAGYAKKG 175
P+ F +++ C T K+ + D +A S+I Y++
Sbjct: 144 MLSSGLTPDYRTFP-SVLKACRTVIDGNKIHCLALKFGFMWDVYVAA---SLIHLYSRYK 199
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
+A +F+ MPV+D+ S+N+M++GY Q+G AL + + V+ ++S
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTE 259
Query: 236 SGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
+GD + + S + ++ +A G++ + +++FD M ++++SWN++
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 292 IAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-- 345
I AY + Q A+ LF ++ D ++ ++ + ++G + R V K
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 346 ---DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
DI A++ + G VD A +FN L D I WN++I+G+ Q+G EA++++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 403 QMPKKNSVSWN----------------------------------------TMISGYAQA 422
M ++ ++ N ++ Y +
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL---MGREGKKPDQSTFX 479
G+++ A ++F + N V WN+LI + + K+++L M EG KPD TF
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIAC---HGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 480 XXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
G E + G L ++ MY + G++E+A + ++
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 539 -VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
D W +L+S ++G A + + EV P+ V + +LS
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLF--EVEPEHVGYHVLLS 661
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 187/420 (44%), Gaps = 58/420 (13%)
Query: 50 GKVEEAVRVFSNTI----HKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
G V + S +I L N +I ++A+ G++ D +++FD+M R+L+SWN++I
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 106 AGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK--- 158
Y N A LF M + D + + + ++ G + R + K
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 159 LES-ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
LE N+V+ YAK G A VFN +P D++S+N++++GY QNG A+ +
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF 277
M E+ ++ N +WV++L ++ G + + +L
Sbjct: 441 MEEEGEIA--------------------------ANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 278 DSMPCKNVVSWNAMIAAYAQDL-----QIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKL 332
+ KN + + + D+ ++++A+ LF ++P + V W+T+I + G
Sbjct: 475 GRL-LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 333 DEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTIC-----WNS 383
++A ++ +M + + + L+S +G VDE F + T I +
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 384 MIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMD----SAENIFQAMEER 438
M+ + ++G+++ AL + M + S W ++S G +D ++E++F+ E
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 160/366 (43%), Gaps = 56/366 (15%)
Query: 46 LGKLGKVEEAVRVFSNTIHK-----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
L +LG + V T+ K ++ N+++ ++AK G + AR +F+ + +++S
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 101 WNTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELL-EL 154
WNT+I+GY N EA +++++M E +W ++ ++ G L + +L L
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 155 VPDK--LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ + L+ S+ Y K G+ DA +F +P + V +N+++A + +G A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE 272
F++M ++ V P+ +++VT+L + G + E
Sbjct: 538 MLFKEMLDEGV---------------------------KPDHITFVTLLSACSHSGLVDE 570
Query: 273 ARRLFDSMPCKNVVS-----WNAMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWSTI---- 322
+ F+ M ++ + M+ Y + Q++ A+K + D W +
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 323 -INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR---VDEASKMFNQLSTRDT 378
++G + +GK+ A E ++ + + L + G+ VDE + + R T
Sbjct: 631 RVHGNVDLGKI--ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688
Query: 379 ICWNSM 384
W+SM
Sbjct: 689 PGWSSM 694
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 24/265 (9%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
N ++ KLG V+ A VF+ + +++++N++IS +A+NG S+A ++++ M +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 97 --NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARE 150
N +W +++ + + KL + + D F + Y + G+LE A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM---PVK-DLVSYNSMLAGYTQNG 206
L +P ++ S WN++IA + G A +F M VK D +++ ++L+ + +G
Sbjct: 508 LFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 207 KMGLALHFFEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTM 260
+ FE M ++ + MV + +G L +A + + + P+A W +
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Query: 261 LCGFARHGKI----TEARRLFDSMP 281
L HG + + LF+ P
Sbjct: 627 LSACRVHGNVDLGKIASEHLFEVEP 651
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
Q LH ++ S I ++ +S L+ +Y G V A F I+ D+ +WN +ISGY
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 552 ALNGYAIEAFKAFKQ-MLSEEVVPDQVTFIGMLSAC 586
G + E + F MLS + PD TF +L AC
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 234/841 (27%), Positives = 387/841 (46%), Gaps = 163/841 (19%)
Query: 49 LGKVEEA-VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
LGK A + F + L+ N++IS+++K G ++ AR++FDKM R+LVSWN+++A
Sbjct: 57 LGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 108 YLHNSM-----VEEASKLFDVMPER----------------------------------- 127
Y +S +++A LF ++ +
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 128 ----DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAK---------- 173
D F ++ Y + GK+++ + L E +P + + WN ++ Y +
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 174 ----------------------KGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQN 205
G SDA +V + V +++ N L+ Y +
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 206 GKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQ-----------LFEKIP 250
G+ L F M E +V V++ LM++ V L+ +Q L +
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
N S + M C + G AR +FD+M ++++SWN++IA AQ+ EAV LF++
Sbjct: 354 N----SLINMYCKLRKFGF---ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 311 LPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA--------AETALMSGLI 358
L D + ++++ L E + Q+ I TAL+
Sbjct: 407 LLRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS------- 411
+ + EA +F + D + WN+M+AG+ QS + L LF M K+ S
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 412 ------------------------------W--NTMISGYAQAGQMDSAENIFQAMEERN 439
W + ++ Y + G M +A+ F ++ +
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
V+W ++I+G ++N A M G PD+ T + G Q+H
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIE 559
LK ND FV +L+ MYAKCG ++ A +F IE +++ +WN+++ G A +G E
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 560 AFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
+ FKQM S + PD+VTFIG+LSACSH+GL ++ + M D+ I+P EHYSCL
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 620 DLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNAS 679
D LGR G +++A N++ M ++A+A ++ +LL ACRV + E G+ A +L ELEP ++S
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 680 NYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPET 739
Y+ LSNM+A A +W+E++ R +M+ + K PG SWIEV+N+I F+ DD + E
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 740 I 740
I
Sbjct: 883 I 883
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 204/436 (46%), Gaps = 43/436 (9%)
Query: 227 NLMVSGFVNSGDLSSARQL-FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
N + S + G + AR L FE+ NP ++ +++ G +T ARR+FD MP +++
Sbjct: 48 NAITSSDLMLGKCTHARILTFEE--NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 286 VSWNAMIAAYAQDLQ-----IDEAVKLFIKLPHKDGVSWSTII----------NGYIRVG 330
VSWN+++AAYAQ + I +A LF ++ +D V S + +GY+
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVW-- 162
Query: 331 KLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
A E ++ CK D AL++ ++ G+V E +F ++ RD + WN M+
Sbjct: 163 ----ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVSWNTMISGY-AQAGQMDSAENIFQAMEER 438
+ + G +EA+DL P + ++ ISG + AGQ+ S N A
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVS 278
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
I+ N ++ +L + Y LK M + DQ TF +G Q+H
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
LK G L VSN+LI MY K + A VF + DLISWNS+I+G A NG +
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK-CMVEDFAIEPLAEHY-- 615
EA F Q+L + PDQ T +L A S +GL L K V I +++ +
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 616 SCLVDLLGRMGRLEEA 631
+ L+D R ++EA
Sbjct: 456 TALIDAYSRNRCMKEA 471
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/755 (28%), Positives = 360/755 (47%), Gaps = 87/755 (11%)
Query: 53 EEAVRVFSNTIHKNLV-------TY--NSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+E ++ IH +V TY N ++ ++ + G AR++FD+MS R++ SWN
Sbjct: 18 DERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNA 77
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE------LVPD 157
+ + EA ++FD MPERD SW MI+ RKG EKA + + +P
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 137
Query: 158 KLE-----SAC---------------------------WNSVIAGYAKKGQFSD-AEKVF 184
+ SAC N++++ YAK G D +VF
Sbjct: 138 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN-SGDLSSAR 243
+ + VSY +++ G + K+ A+ F M EK V ++ +S ++ S
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 244 QLFEKIPNP--NAVSWVTMLCGF--------------ARHGKITEARRLFDSMPCKNVVS 287
L E N + + + GF A++ + A +F MP NVVS
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
WN MI + Q+ + D++V+ ++ + V+ +++ R G ++ R +++ +P
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQL---------STRDTICWNSMIAGFCQSGRM 394
++A A++SG +EA F Q+ +T I + F + G+
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ-AMEERNIVSWNSLITGFLQN 453
+ + R KNS + +I+ Y++ +M+ +E IF + E +I WNS+I+GF N
Sbjct: 438 IHGV-VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 454 SLYFDALKSLVLMGREGKK----PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
L K+L+L R + P++++F G Q H ++KSGY++D
Sbjct: 497 ML---DTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
FV AL MY KCG ++SA Q F A+ + + WN +I GY NG EA +++M+S
Sbjct: 554 SFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMIS 613
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
PD +TF+ +L+ACSH+GL GL++ M IEP +HY C+VD LGR GRLE
Sbjct: 614 SGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLE 673
Query: 630 EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHA 689
+A + K+++ LW LL +CRVH ++ + A +L L+P +++ Y+ LSN ++
Sbjct: 674 DAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYS 733
Query: 690 EAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQI 724
+W++ L+ LM R K PG SW N +
Sbjct: 734 SLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/567 (22%), Positives = 233/567 (41%), Gaps = 101/567 (17%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLG-KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGK 82
H + + + K++F N + K G V+ VRVF + N V+Y ++I A+ K
Sbjct: 161 HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENK 220
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRK 142
+ +A Q+F M ++ + + ++ L S E D + E I C +
Sbjct: 221 VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC---DSLSEIYGNELGKQIHCLALR 277
Query: 143 ----GKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
G L LLE+ YAK + AE +F MP ++VS+N M
Sbjct: 278 LGFGGDLHLNNSLLEI----------------YAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA 254
+ G+ Q + ++ F +M + N V+ ++ SGD+ + R++F IP P+
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSV 381
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK 314
+W ML G++ + EA F M +N+
Sbjct: 382 SAWNAMLSGYSNYEHYEEAISNFRQMQFQNL---------------------------KP 414
Query: 315 DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMF 370
D + S I++ R+ L+ ++++ + +I+ + ++SGLI + +++ + +F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 371 NQ-LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-----KNSVSWNTMISG------ 418
+ ++ D CWNSMI+GF + +AL LFR+M + N S+ T++S
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 419 -----------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLITG 449
Y + G++DSA F A+ +N V WN +I G
Sbjct: 535 LLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHG 594
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-SGYIN 508
+ N +A+ M G+KPD TF + G ++ + + G
Sbjct: 595 YGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEP 654
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTA 535
+L ++ + GR+E AE++ A
Sbjct: 655 ELDHYICIVDCLGRAGRLEDAEKLAEA 681
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 199/446 (44%), Gaps = 55/446 (12%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
VE R+ + N VT S++ ++G + R++F + Q ++ +WN M++GY +
Sbjct: 335 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNY 394
Query: 112 SMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACW 164
EEA F M + D + +++++ R LE +++ +V S
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 165 NSVIAGYAKKGQFSDAEKVF-NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+ +IA Y++ + +E +F + + D+ +NSM++G+ N AL F +M + V
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 224 V-----SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS-------WVTMLCGFARHGKIT 271
+ S+ ++S L RQ + VS M C + G+I
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYC---KCGEID 571
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYI 327
AR+ FD++ KN V WN MI Y + + DEAV L+ K+ DG+++ +++
Sbjct: 572 SARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Query: 328 RVGKLDEAREVYNQMP-CKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR-DTICW 381
G ++ E+ + M I E ++ L + GR+++A K+ + ++ W
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLW 691
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKK-------NSVSWNTMISGYAQAGQMDSAENIFQA 434
+++ S R+ + L R++ +K +S ++ + + Y+ Q D + + Q
Sbjct: 692 EILLS----SCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL-QG 746
Query: 435 MEERNIV------SW----NSLITGF 450
+ +N V SW N L +GF
Sbjct: 747 LMNKNRVHKTPGQSWTTYGNDLDSGF 772
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNT 103
K G+++ A + F + KN V +N MI + NG+ +A L+ KM + + +++ +
Sbjct: 566 KCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVS 625
Query: 104 MIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARELLELVP 156
++ H+ +VE ++ M PE D++ ++ C R G+LE A +L E P
Sbjct: 626 VLTACSHSGLVETGLEILSSMQRIHGIEPELDHY--ICIVDCLGRAGRLEDAEKLAEATP 683
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKV 183
K S W +++ G S A +V
Sbjct: 684 YKSSSVLWEILLSSCRVHGDVSLARRV 710
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 211/718 (29%), Positives = 361/718 (50%), Gaps = 42/718 (5%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+N ++ +AK + A LF K+ RN+ SW +I + E A F M
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 125 PERDNFSWALMITCYTRK-GKLEKAR----ELLELVPDKLESACW--NSVIAGYAKKGQF 177
E + F ++ + G L+ +R +V LE + +S+ Y K G
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVS------ 231
DA KVF+ +P ++ V++N+++ GY QNGK A+ F M ++ V + VS
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 232 ---GFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
G V G S A + + N + ++L + + G I A +FD M K+VV+W
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTW 343
Query: 289 NAMIAAYAQDLQIDEAVKL-----FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
N +I+ Y Q +++A+ + KL + D V+ +T+++ R L +EV Q
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKY-DCVTLATLMSAAARTENLKLGKEV--QCY 400
Query: 344 C------KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
C DI + +M + G + +A K+F+ +D I WN+++A + +SG EA
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 398 LDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITG 449
L LF M N ++WN +I + GQ+D A+++F M+ N++SW +++ G
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
+QN +A+ L M G +P+ + +G +H YI+++ +
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 510 LF-VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
L + +L+ MYAKCG + AE+VF + +L N++IS YAL G EA ++ +
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ PD +T +LSAC+HAG NQ +++F +V +++P EHY +VDLL G
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMH 688
E+A ++ M K +A + SL+ +C + E+ ++ + +L E EP N+ NY+T+SN +
Sbjct: 701 EKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAY 760
Query: 689 AEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQ--IQCFLSDDSGRLRPETIQIIL 744
A G W+EV ++R +M+ K K PGCSWI++ + + F+++D R IQ++L
Sbjct: 761 AVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 219/492 (44%), Gaps = 103/492 (20%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
GK G +++A +VF +N V +N+++ + +NGK +A +LF M ++ + V+ +
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 103 TMIAG-----------------------------------YLHNSMVEEASKLFDVMPER 127
T ++ Y ++E A +FD M E+
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVP-DKLESAC----------------------- 163
D +W L+I+ Y ++G +E A + +L+ +KL+ C
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 164 --------------WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
++V+ YAK G DA+KVF+ KDL+ +N++LA Y ++G G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 210 LALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML 261
AL F M NV++WNL++ + +G + A+ +F ++ + PN +SW TM+
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 262 CGFARHGKITEA----RRLFDSMPCKNVVSWNAMIAAYAQ--DLQIDEAVKLFI--KLPH 313
G ++G EA R++ +S N S ++A A L I + +I L H
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 314 KDGVSWST-IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ 372
VS T +++ Y + G +++A +V+ ++ A++S G + EA ++
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 373 LS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAG 423
L D I ++++ +G +++A+++F + K S+ + M+ A AG
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 424 QMDSAENIFQAM 435
+ + A + + M
Sbjct: 699 ETEKALRLIEEM 710
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 193/423 (45%), Gaps = 63/423 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLGK E ++ ++V ++++ ++AK G I DA+++FD +++L+ WNT++A
Sbjct: 392 KLGK-EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAA 450
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV 167
Y + + EA +LF M LE VP + + WN +
Sbjct: 451 YAESGLSGEALRLFYGMQ--------------------------LEGVPPNVIT--WNLI 482
Query: 168 IAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE--- 220
I + GQ +A+ +F M + +L+S+ +M+ G QNG A+ F KM E
Sbjct: 483 ILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Query: 221 -KNVVSWNLMVSGFVNSGDLSSARQ----LFEKIPNPNAVSWVTMLCG-FARHGKITEAR 274
N S + +S + L R + + + + VS T L +A+ G I +A
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAE 602
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVG 330
++F S + NAMI+AYA + EA+ L+ L D ++ + +++ G
Sbjct: 603 KVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 331 KLDEAREVYNQM-------PCKDIAAETALMSGLIQT-GRVDEASKMFNQLSTR-DTICW 381
+++A E++ + PC + LM L+ + G ++A ++ ++ + D
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLE---HYGLMVDLLASAGETEKALRLIEEMPFKPDARMI 719
Query: 382 NSMIAGFCQSGRMDEALD-LFRQM---PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
S++A C R E +D L R++ +NS ++ T+ + YA G D + + M+
Sbjct: 720 QSLVAS-CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 438 RNI 440
+ +
Sbjct: 779 KGL 781
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 37/287 (12%)
Query: 403 QMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
Q +S S+ +S + G++ A ++ M+ RN+ + LQ +Y
Sbjct: 29 QAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVY------ 82
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNALIAMY 520
+ D ST G Q+H ILK+G Y + ++ L+ Y
Sbjct: 83 ---------ERDLST----------------GKQIHARILKNGDFYARNEYIETKLVIFY 117
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
AKC +E AE +F+ + ++ SW ++I G A F +ML E+ PD
Sbjct: 118 AKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVP 177
Query: 581 GMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDV 640
+ AC + G + +V+ +E S L D+ G+ G L++A V +
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 641 KANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSELEPHNASNYITLS 685
+ NA W +L+ G + KN E I F+ MR +EP + LS
Sbjct: 237 R-NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 216/741 (29%), Positives = 356/741 (48%), Gaps = 77/741 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
+++ ++ G +S +R++F++M RN+VSW +++ GY EE ++ M
Sbjct: 81 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 140
Query: 128 -DNFSWALMIT-CYTRKGKLEKARELLELVPDKLES--ACWNSVIAGYAKKGQFSDAEKV 183
+ S +L+I+ C K + + + ++V LES A NS+I+ G A +
Sbjct: 141 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 200
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNSG 237
F+ M +D +S+NS+ A Y QNG + + F M VS L V G V+
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 260
Query: 238 DLSSA-RQLFEKIPNPNAVSWV-TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
L K+ + V T+L +A G+ EA +F MP K+++SWN+++A++
Sbjct: 261 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 296 AQDLQIDEAVKLFIKL-PHKDGVSWSTIIN-------------GYIRVGKLDEAREVYNQ 341
D + +A+ L + V++ T + G I G + + YNQ
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ AL+S + G + E+ ++ Q+ RD + WN++I G+ + D+AL F
Sbjct: 381 I------IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 402 RQMPKKNSVS----------------------------------------WNTMISGYAQ 421
+ M + S N++I+ YA+
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
G + S++++F ++ RNI++WN+++ + + LK + M G DQ +F
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 554
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+ G QLH +K G+ +D F+ NA MY+KCG + ++ L
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 614
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
SWN LIS +GY E F +ML + P VTF+ +L+ACSH GL ++GL +
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 674
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
+ DF +EP EH C++DLLGR GRL EA + M +K N +W SLL +C++H NL+
Sbjct: 675 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 734
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
G AA LS+LEP + S Y+ SNM A GRWE+VE +R M K K CSW++++
Sbjct: 735 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 794
Query: 722 NQIQCFLSDDSGRLRPETIQI 742
+++ F D R P+T++I
Sbjct: 795 DKVSSFGIGD--RTHPQTMEI 813
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 179/709 (25%), Positives = 306/709 (43%), Gaps = 107/709 (15%)
Query: 93 MSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALMITCYTRKGKLEKA 148
M RN VSWNTM++G + + E + F D+ + +F A ++T R G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM--F 58
Query: 149 RELLELVPDKLESACWNSVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGY 202
RE +++ +S + V Y G S + KVF MP +++VS+ S++ GY
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 203 TQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV 258
+ G+ + ++ M + V S +L++S D S RQ+ ++ S +
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 259 ----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IKLPH 313
+++ G + A +FD M ++ +SWN++ AAYAQ+ I+E+ ++F +
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 314 KDGVSWSTIINGYIRVGKLDE---AREVYNQMPCKDIAAETALMSGLIQ----TGRVDEA 366
D V+ +T+ +G +D R ++ + + + + L++ GR EA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK------------------- 407
+ +F Q+ T+D I WNS++A F GR +AL L M
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 408 --------------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLI 447
N + N ++S Y + G+M + + M R++V+WN+LI
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX-XXXXXXXQVGNQLHEYILKSGY 506
G+ ++ AL + M EG + T + G LH YI+ +G+
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
+D V N+LI MYAKCG + S++ +F ++ ++I+WN++++ A +G+ E K +
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV------EDFAIEPLAEHYS---- 616
M S V DQ +F LSA + + +G L V + F A+ YS
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 598
Query: 617 --------------------CLVDLLGRMGRLEE---AFNVVRGMDVKANAGLWGSLLGA 653
L+ LGR G EE F+ + M +K + SLL A
Sbjct: 599 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658
Query: 654 CR----VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVE 698
C V K L + A R LEP + I + ++ +GR E E
Sbjct: 659 CSHGGLVDKGLAYYDMIA-RDFGLEP-AIEHCICVIDLLGRSGRLAEAE 705
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 173/398 (43%), Gaps = 36/398 (9%)
Query: 311 LPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-GRVDEASKM 369
+P ++ VSW+T+++G +RVG E E + +M I + +++ L+ GR + M
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR---SGSM 57
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAE 429
F R+ + + +A +SG + + VS ++ Y G + +
Sbjct: 58 F-----REGVQVHGFVA---KSGLLSDVY-----------VS-TAILHLYGVYGLVSCSR 97
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+F+ M +RN+VSW SL+ G+ + + M EG ++++
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G Q+ ++KSG + L V N+LI+M G V+ A +F + D ISWNS+ +
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
YA NG+ E+F+ F M + T +LS H G + ++
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-----IHGLVVK 272
Query: 610 PLAEHYSCLVDLLGRM----GRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF 665
+ C+ + L RM GR EA V + M K + W SL+ A V+ +
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM-ASFVNDGRSLDAL 330
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+ S + + NY+T ++ A + E+ R+L
Sbjct: 331 GLL-CSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 119/262 (45%), Gaps = 25/262 (9%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
+HV KN I K G + + +F+ ++N++T+N+M++ A +G + +L KM
Sbjct: 482 EHV--KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 94 SQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKL 145
+ S++ ++ +++EE +L + E D+F + Y++ G++
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 146 EKARELLELVPDKLESA--CWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSML 199
E+++++P + + WN +I+ + G F + F+ M + V++ S+L
Sbjct: 600 G---EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 200 AGYTQNGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPN 253
+ G + L +++ +A E + ++ SG L+ A K+P PN
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 716
Query: 254 AVSWVTMLCGFARHGKITEARR 275
+ W ++L HG + R+
Sbjct: 717 DLVWRSLLASCKIHGNLDRGRK 738
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 216/741 (29%), Positives = 356/741 (48%), Gaps = 77/741 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
+++ ++ G +S +R++F++M RN+VSW +++ GY EE ++ M
Sbjct: 98 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 157
Query: 128 -DNFSWALMIT-CYTRKGKLEKARELLELVPDKLES--ACWNSVIAGYAKKGQFSDAEKV 183
+ S +L+I+ C K + + + ++V LES A NS+I+ G A +
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNSG 237
F+ M +D +S+NS+ A Y QNG + + F M VS L V G V+
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 277
Query: 238 DLSSA-RQLFEKIPNPNAVSWV-TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
L K+ + V T+L +A G+ EA +F MP K+++SWN+++A++
Sbjct: 278 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 296 AQDLQIDEAVKLFIKL-PHKDGVSWSTIIN-------------GYIRVGKLDEAREVYNQ 341
D + +A+ L + V++ T + G I G + + YNQ
Sbjct: 338 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 397
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ AL+S + G + E+ ++ Q+ RD + WN++I G+ + D+AL F
Sbjct: 398 I------IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 402 RQMPKKNSVS----------------------------------------WNTMISGYAQ 421
+ M + S N++I+ YA+
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
G + S++++F ++ RNI++WN+++ + + LK + M G DQ +F
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+ G QLH +K G+ +D F+ NA MY+KCG + ++ L
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
SWN LIS +GY E F +ML + P VTF+ +L+ACSH GL ++GL +
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
+ DF +EP EH C++DLLGR GRL EA + M +K N +W SLL +C++H NL+
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
G AA LS+LEP + S Y+ SNM A GRWE+VE +R M K K CSW++++
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811
Query: 722 NQIQCFLSDDSGRLRPETIQI 742
+++ F D R P+T++I
Sbjct: 812 DKVSSFGIGD--RTHPQTMEI 830
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 186/726 (25%), Positives = 317/726 (43%), Gaps = 107/726 (14%)
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFS 131
++ K G++ AR LFD M RN VSWNTM++G + + E + F D+ + +F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG------YAKKGQFSDAEKVFN 185
A ++T R G + RE +++ +S + V Y G S + KVF
Sbjct: 61 IASLVTACGRSGSM--FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSS 241
MP +++VS+ S++ GY+ G+ + ++ M + V S +L++S D S
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 242 ARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
RQ+ ++ S + +++ G + A +FD M ++ +SWN++ AAYAQ
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 298 DLQIDEAVKLF-IKLPHKDGVSWSTIINGYIRVGKLDE---AREVYNQMPCKDIAAETAL 353
+ I+E+ ++F + D V+ +T+ +G +D R ++ + + +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 354 MSGLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-- 407
+ L++ GR EA+ +F Q+ T+D I WNS++A F GR +AL L M
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 408 -------------------------------------NSVSWNTMISGYAQAGQMDSAEN 430
N + N ++S Y + G+M +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX-XXXXX 489
+ M R++V+WN+LI G+ ++ AL + M EG + T
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+ G LH YI+ +G+ +D V N+LI MYAKCG + S++ +F ++ ++I+WN++++
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV------ 603
A +G+ E K +M S V DQ +F LSA + + +G L V
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 604 EDFAIEPLAEHYS------------------------CLVDLLGRMGRLEE---AFNVVR 636
+ F A+ YS L+ LGR G EE F+ +
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 637 GMDVKANAGLWGSLLGACR----VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
M +K + SLL AC V K L + A R LEP + I + ++ +G
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA-RDFGLEP-AIEHCICVIDLLGRSG 716
Query: 693 RWEEVE 698
R E E
Sbjct: 717 RLAEAE 722
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 169/391 (43%), Gaps = 21/391 (5%)
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICW 381
Y + G++ AR +++ MP ++ + +MSG+++ G E + F ++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 382 NSMIAGFCQSGRM-DEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDSAENIFQAME 436
S++ +SG M E + + + K +S ++ Y G + + +F+ M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
+RN+VSW SL+ G+ + + M EG ++++ +G Q
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+ ++KSG + L V N+LI+M G V+ A +F + D ISWNS+ + YA NG+
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
E+F+ F M + T +LS H G + ++ +
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-----IHGLVVKMGFDSVV 296
Query: 617 CLVDLLGRM----GRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
C+ + L RM GR EA V + M K + W SL+ A V+ + + S
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM-ASFVNDGRSLDALGLL-CSM 353
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+ + NY+T ++ A + E+ R+L
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 39 KNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
KN I K G + + +F+ ++N++T+N+M++ A +G + +L KM +
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Query: 99 ----VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARE 150
S++ ++ +++EE +L + E D+F + Y++ G++ E
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG---E 618
Query: 151 LLELVPDKLESA--CWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQ 204
+++++P + + WN +I+ + G F + F+ M + V++ S+L +
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 678
Query: 205 NGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWV 258
G + L +++ +A E + ++ SG L+ A K+P PN + W
Sbjct: 679 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 738
Query: 259 TMLCGFARHGKITEARR 275
++L HG + R+
Sbjct: 739 SLLASCKIHGNLDRGRK 755
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 307/577 (53%), Gaps = 74/577 (12%)
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFAR 266
A+ F+ + E N++ WN M G S D SA +L+ + + PN+ ++ +L A+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGY 326
E +++ + L++ + L++ +++I+ Y
Sbjct: 147 SKAFKEGQQI------------------HGHVLKLGCDLDLYVH---------TSLISMY 179
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
++ G+L++A +V+++ P +D+ + TAL+ G G ++ A K+F+++ +D + WN+MI+
Sbjct: 180 VQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMIS 239
Query: 387 GFCQSGRMDEALDLFRQMPKKNSVS--------------------------W-------- 412
G+ ++G EAL+LF+ M K N W
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 413 -----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
N +I Y++ G++++A +F+ + ++++SWN+LI G+ +LY +AL M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK--SGYINDLFVSNALIAMYAKCGR 525
R G+ P+ T +G +H YI K G N + +LI MYAKCG
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E+A QVF +I L SWN++I G+A++G A +F F +M + PD +TF+G+LSA
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH+G+ + G +F+ M +D+ + P EHY C++DLLG G +EA ++ M+++ +
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL AC++H N+E+GE A L ++EP N +Y+ LSN++A AGRW EV + R L+
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
DK K+PGCS IE+ + + F+ D + P +I
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGD--KFHPRNREI 634
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 196/414 (47%), Gaps = 64/414 (15%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCY 139
A +F + + NL+ WNTM G+ +S A KL+ M P F + L +C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK-SCA 145
Query: 140 TRKGKLEKAR---ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
K E + +L+L D L+ S+I+ Y + G+ DA KVF+ P +D+VSY
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCD-LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNP 252
+++ GY G + A F+++ K+VVSWN M+SG+ +G+ A +LF+ + P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 253 NAVSWVTMLCGFARHGKITEARRLF----DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+ + VT++ A+ G I R++ D N+ NA+I Y++ +++ A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 309 IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM-----------------PCKDIAA-- 349
+LP+KD +SW+T+I GY + EA ++ +M C + A
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 350 ----------------------ETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
T+L+ + G ++ A ++FN + + WN+MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 388 FCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
F GR D + DLF +M K + +++ ++S + +G +D +IF+ M +
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 168/333 (50%), Gaps = 27/333 (8%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+L + S+IS++ +NG++ DA ++FDK R++VS+ +I GY +E A KLFD +P
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSD 179
+D SW MI+ Y G ++A EL + + PD+ + +V++ A+ G
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE---STMVTVVSACAQSGSIEL 284
Query: 180 AEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
+V + +L N+++ Y++ G++ A FE++ K+V+SWN ++ G+ +
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 236 SGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEAR--RLFDSMPCKNVVSWN 289
A LF+++ PN V+ +++L A G I R ++ K V + +
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 290 ----AMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK 345
++I YA+ I+ A ++F + HK SW+ +I G+ G+ D + +++++M
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 346 DIAAE----TALMSGLIQTGRVDEASKMFNQLS 374
I + L+S +G +D +F ++
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 162/314 (51%), Gaps = 21/314 (6%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G++E+A +VF + H+++V+Y ++I +A G I +A++LFD++ +++VSWN MI+GY
Sbjct: 183 GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 242
Query: 110 HNSMVEEASKLF-DVMP---ERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA--- 162
+EA +LF D+M D + +++ + G +E R++ + D +
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 302
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-- 220
N++I Y+K G+ A +F +P KD++S+N+++ GYT AL F++M
Sbjct: 303 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 221 --KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCG-FARHGKITE 272
N V+ ++ + G + R + I NA S T L +A+ G I
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIR 328
A ++F+S+ K++ SWNAMI +A + D + LF ++ D +++ +++
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
Query: 329 VGKLDEAREVYNQM 342
G LD R ++ M
Sbjct: 483 SGMLDLGRHIFRTM 496
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 181/607 (29%), Positives = 302/607 (49%), Gaps = 88/607 (14%)
Query: 205 NGKMGLALHFFEKMAEKNVV-SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
+G + AL + E N+V ++ LM S + AR++F++IP PN SW +L
Sbjct: 29 HGNIIRALPYPETFLYNNIVHAYALMKSS-------TYARRVFDRIPQPNLFSWNNLLLA 81
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF--------------- 308
+++ G I+E F+ +P ++ V+WN +I Y+ + AVK +
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 309 ----IKLPHKDG-VSWSTIING--------------------YIRVGKLDEAREVYNQMP 343
+KL +G VS I+G Y VG + +A++V+ +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ +LM GL+ G +++A ++F + +D++ W +MI G Q+G EA++ FR+
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 404 MP---------------------------------------KKNSVSWNTMISGYAQAGQ 424
M + + + +I Y +
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
+ A+ +F M+++N+VSW +++ G+ Q +A+K + M R G PD T
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
+ G+Q H + SG I+ + VSN+L+ +Y KCG ++ + ++F + D +SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+++S YA G A+E + F +M+ + PD VT G++SACS AGL +G FK M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
++ I P HYSC++DL R GRLEEA + GM +A W +LL ACR NLEIG+
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQI 724
+AA L EL+PH+ + Y LS+++A G+W+ V +LR MR+K K PG SWI+ + ++
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 725 QCFLSDD 731
F +DD
Sbjct: 621 HSFSADD 627
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 223/493 (45%), Gaps = 67/493 (13%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEE-AVRVFSNTIHKNLVTY 70
G ++ + M H I ++ F N I+H L K A RVF NL ++
Sbjct: 17 GARNQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALMKSSTYARRVFDRIPQPNLFSW 75
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ ++K G IS+ F+K+ R+ V+WN +I GY + +V A K ++ M RD F
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRD-F 133
Query: 131 SWAL-------MITCYTRKGKLEKARELL-ELVPDKLES--ACWNSVIAGYAKKGQFSDA 180
S L M+ + G + +++ +++ ES + ++ YA G SDA
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
+KVF + ++ V YNS++ G G + AL F M EK+ VSW M+ G +G
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAK 252
Query: 241 SARQLFEKIP----NPNAVSWVTMLCGFARHGKITE------------------------ 272
A + F ++ + + ++L G I E
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 273 -----------ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGV 317
A+ +FD M KNVVSW AM+ Y Q + +EAVK+F+ + D
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQL 373
+ I+ V L+E + + + + + + L+ + G +D+++++FN++
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAE 429
+ RD + W +M++ + Q GR E + LF +M K + V+ +IS ++AG ++ +
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 430 NIFQAM-EERNIV 441
F+ M E IV
Sbjct: 493 RYFKLMTSEYGIV 505
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
+V N + GK G ++++ R+F+ ++ V++ +M+S +A+ G+ + QLFDKM
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 95 QRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKL 145
Q L V+ +I+ +VE+ + F +M ++ MI ++R G+L
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 146 EKARELLELVPDKLESACWNSVIAGYAKKGQFS----DAEKVFNLMPVKDLVSYNSMLAG 201
E+A + +P ++ W ++++ KG AE + L P Y + +
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP-HHPAGYTLLSSI 583
Query: 202 YTQNGKMGLALHFFEKMAEKNV 223
Y GK M EKNV
Sbjct: 584 YASKGKWDSVAQLRRGMREKNV 605
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 304/587 (51%), Gaps = 30/587 (5%)
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
+ G FSD L + L S+ S+ A F+++ + N +WN ++
Sbjct: 55 RTGTFSDPYSASKLFAMAALSSFASL----------EYARKVFDEIPKPNSFAWNTLIRA 104
Query: 233 FVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCGFARHGKITEARRL----FDSMPCK 283
+ + D + F E PN ++ ++ A ++ + L S
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
+V N++I Y +D A K+F + KD VSW+++ING+++ G D+A E++ +M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 344 CKDIAAETALMSGLIQT---------GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
+D+ A M G++ GR + N+++ T+ N+M+ + + G +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA-NAMLDMYTKCGSI 283
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
++A LF M +K++V+W TM+ GYA + ++A + +M +++IV+WN+LI+ + QN
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 455 LYFDALKSL-VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+AL L ++ K +Q T ++G +H YI K G + V+
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+ALI MY+KCG +E + +VF ++E D+ W+++I G A++G EA F +M V
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
P+ VTF + ACSH GL ++ LF M ++ I P +HY+C+VD+LGR G LE+A
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523
Query: 634 VVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGR 693
+ M + + +WG+LLGAC++H NL + E A RL ELEP N ++ LSN++A+ G+
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583
Query: 694 WEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
WE V LR MR K PGCS IE+ I FLS D+ E +
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 195/411 (47%), Gaps = 60/411 (14%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNS-MVEEASKLFDVMPER----DNFSWALMITCYT 140
AR++FD++ + N +WNT+I Y V D++ E + +++ +I
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 141 RKGKLEKARELLEL-VPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNS 197
L + L + V + S + NS+I Y G A KVF + KD+VS+NS
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 198 MLAGYTQNGKMGLALHFFEKMA----------------------------------EKNV 223
M+ G+ Q G AL F+KM E+N
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 224 VSWNL-----MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
V+ NL M+ + G + A++LF+ + + V+W TML G+A AR + +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DGVSWSTIINGYIRVGKLD 333
SMP K++V+WNA+I+AY Q+ + +EA+ +F +L + + ++ + ++ +VG L+
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 334 EAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
R +++ + I + S LI + G ++++ ++FN + RD W++MI G
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 390 QSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G +EA+D+F +M K N V++ + + G +D AE++F ME
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 26/342 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H + + S G VF N I G ++ A +VF+ K++V++NSMI+ F + G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSM----VEEASKLFDVMPE-RDNFSWAL---M 135
A +LF KM ++ + + + G L +E ++ + E R N + L M
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 136 ITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
+ YT+ G +E A+ L + + +K ++ W +++ GYA + A +V N MP KD+V++
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 196 NSMLAGYTQNGKMGLALHFF-----EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
N++++ Y QNGK AL F +K + N ++ +S G L R + I
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 251 ------NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
N + S + + +++ G + ++R +F+S+ ++V W+AMI A +EA
Sbjct: 393 KHGIRMNFHVTSALIHM--YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 305 VKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQM 342
V +F K+ +GV+++ + G +DEA +++QM
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 154/348 (44%), Gaps = 54/348 (15%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL 120
N ++ NL N+M+ ++ K G I DA++LFD M +++ V+W TM+ GY + E A ++
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 121 FDVMPERDNFSWALMITCYTRKGK------------LEKARELLELVPDKLESAC----- 163
+ MP++D +W +I+ Y + GK L+K +L ++ SAC
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 164 -----W-----------------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
W +++I Y+K G + +VFN + +D+ +++M+ G
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 202 YTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----P 252
+G A+ F KM E NV V++ + ++G + A LF ++ + P
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIAAYAQDLQIDEAVKLFIKL 311
+ ++ R G + +A + ++MP S W A++ A ++ A +L
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 560
Query: 312 ----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
P DG + + N Y ++GK + E+ M + E S
Sbjct: 561 LELEPRNDG-AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/620 (30%), Positives = 323/620 (52%), Gaps = 75/620 (12%)
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
YA G + A K+F MP L+SYN ++ Y + G A+ F +M + V +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV---KCVP 115
Query: 231 SGFV------NSGDLSSARQLFEKIPNPNAVSWV--------TMLCGFARHGKITEARRL 276
G+ +G+L S + L + SW +L + GK+ AR +
Sbjct: 116 DGYTYPFVAKAAGELKSMK-LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-------IKLPHKDGVSWSTIINGYIRV 329
FD M ++V+SWN MI+ Y ++ +++A+ +F + L H VS + G+++
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC-GHLK- 232
Query: 330 GKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
L+ R V+ + K I + AL++ ++ GR+DEA +F+++ RD I W MI
Sbjct: 233 -DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVS----------------------W------- 412
G+ + G ++ AL+L R M + N+V+ W
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 413 ------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
++IS YA+ ++D +F + + W+++I G +QN L DAL M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
RE +P+ +T + +H Y+ K+G+++ L + L+ +Y+KCG +
Sbjct: 412 RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL 471
Query: 527 ESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
ESA ++F I+ D++ W +LISGY ++G A + F +M+ V P+++TF
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
L+ACSH+GL +GL LF+ M+E + + HY+C+VDLLGR GRL+EA+N++ + +
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 643 NAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRV 702
+ +WG+LL AC H+N+++GE AA +L ELEP N NY+ L+N++A GRW+++E++R
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 703 LMRDKRAGKLPGCSWIEVQN 722
+M + K PG S IE+++
Sbjct: 652 MMENVGLRKKPGHSTIEIRS 671
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 246/541 (45%), Gaps = 71/541 (13%)
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS---WVTMLCGFARHGKITEARR 275
A +V + +++ F + +S + L + VS T+ +A G IT AR+
Sbjct: 11 ALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARK 70
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK------DGVSWSTIINGY--- 326
LF+ MP +++S+N +I Y ++ +A+ +FI++ + DG ++ +
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 327 --IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+++G + R + +D + AL++ + G+V+ A +F+ + RD I WN+M
Sbjct: 131 KSMKLGLVVHGR-ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 385 IAGFCQSGRMDEALDLF----------------------------------------RQM 404
I+G+ ++G M++AL +F +++
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
K V N +++ Y + G+MD A +F ME R++++W +I G+ ++ +AL+
Sbjct: 250 GDKIEVK-NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
LM EG +P+ T G LH + ++ +D+ + +LI+MYAKC
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
RV+ +VF+ W+++I+G N +A FK+M E+V P+ T +L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 585 ACSHAGLAN--QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
A +A LA+ Q +++ C + + + LV + + G LE A + G+ K
Sbjct: 429 A--YAALADLRQAMNI-HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 643 NAG---LWGSLLGACRVHKN----LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ LWG+L+ +H + L++ F M S + P N + + N + +G E
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQV--FMEMVRSGVTP-NEITFTSALNACSHSGLVE 542
Query: 696 E 696
E
Sbjct: 543 E 543
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 256/548 (46%), Gaps = 96/548 (17%)
Query: 72 SMISV-FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
S +SV +A G I+ AR+LF++M Q +L+S+N +I Y+ + +A +F M
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPDKLESACW--------NSVIAGYAKKGQ 176
D +++ + G+L+ + L LV W N+++A Y G+
Sbjct: 113 CVPDGYTYPFVAKA---AGELKSMK--LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV------VSWNLMV 230
A VF++M +D++S+N+M++GY +NG M AL F+ M ++V + L V
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 231 SGFV-------NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
G + N L ++L +KI NA+ + + C G++ EAR +FD M +
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKC-----GRMDEARFVFDRMERR 282
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI-INGYIRVG----KLDEAREV 338
+V++W MI Y +D ++ A++L +L +GV + + I + V K+++ + +
Sbjct: 283 DVITWTCMINGYTEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 339 YN----QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
+ Q DI ET+L+S + RVD ++F+ S T W+++IAG Q+ +
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYA------------------------------ 420
+AL LF++M ++ N + N+++ YA
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL 461
Query: 421 -----QAGQMDSAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+ G ++SA IF ++E +++V W +LI+G+ + +AL+ + M R G
Sbjct: 462 VHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN---ALIAMYAKCGRVES 528
P++ TF + G L ++L+ + L SN ++ + + GR++
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLE--HYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 529 AEQVFTAI 536
A + T I
Sbjct: 580 AYNLITTI 587
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 205/424 (48%), Gaps = 38/424 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLG V R+ + ++ N++++++ GK+ AR +FD M R+++SWNTMI+G
Sbjct: 134 KLGLVVHG-RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 108 YLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVP-----DK 158
Y N + +A +FD M + D+ + M+ LE R + +LV DK
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+E N+++ Y K G+ +A VF+ M +D++++ M+ GYT++G + AL M
Sbjct: 253 IEVK--NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 219 ----AEKNVVSWNLMVSGF-----VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK 269
N V+ +VS VN G + +++ + + + +++ +A+ +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS-DIIIETSLISMYAKCKR 369
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG----VSWSTIING 325
+ R+F + W+A+IA Q+ + +A+ LF ++ +D + ++++
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 326 YIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRD 377
Y + L +A ++ + + A T L+ + G ++ A K+FN + ++D
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQ 433
+ W ++I+G+ G AL +F +M + N +++ + ++ + +G ++ +F+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 434 AMEE 437
M E
Sbjct: 550 FMLE 553
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 154/366 (42%), Gaps = 40/366 (10%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
G ++M HKL G + KN + K G+++EA VF ++++T+
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
MI+ + ++G + +A +L M + IA S+V V +
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA-----SLVSVCGDALKVNDGKCLHG 343
Query: 132 WAL-------------MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
WA+ +I+ Y + +++ + K + W+++IAG + S
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS-GASKYHTGPWSAIIAGCVQNELVS 402
Query: 179 DAEKVFNLMPVKD----LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
DA +F M +D + + NS+L Y + A++ + + +S +G V
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 235 N----SGDLSSARQLF----EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM----PC 282
+ G L SA ++F EK + + V W ++ G+ HG A ++F M
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLF-IKLPHKDGVS----WSTIINGYIRVGKLDEARE 337
N +++ + + A + ++E + LF L H ++ ++ I++ R G+LDEA
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 338 VYNQMP 343
+ +P
Sbjct: 583 LITTIP 588
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 309 bits (791), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 210/712 (29%), Positives = 357/712 (50%), Gaps = 71/712 (9%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM--- 124
V +++I VF+KN + DA ++F N+ WNT+IAG L N LF M
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 125 -PERDNFSWA-LMITCYT----RKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
+ D+++++ ++ C + R GK+ +AR + D C +++ YAK G +
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVF--VC-TAIVDLYAKCGHMA 302
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
+A +VF+ +P +VS+ ML+GYT++ AL F++M V N V+ +++
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 239 LSS----ARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLF---DSMPCKNVVS 287
S A Q+ F+ ++ ++ +++ G I + ++F D + +N+V
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV- 421
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIIN--GYIRVGKLDEAREVYNQ 341
N MI +++Q + +A++LF ++ + D S ++++ + +GK + +
Sbjct: 422 -NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ D+ ++L + + G ++E+ K+F + +D CW SMI+GF + G + EA+ LF
Sbjct: 481 L-VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 402 RQM-------------------------PKKNSVSWNTMISG--------------YAQA 422
+M P+ + T+ +G Y++
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
G + A ++ + E + VS +SLI+G+ Q+ L D M G D
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+G Q+H YI K G + V ++L+ MY+K G ++ + F+ I DLI
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
+W +LI+ YA +G A EA + + M + PD+VTF+G+LSACSH GL + M
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
V+D+ IEP HY C+VD LGR GRL EA + + M +K +A +WG+LL AC++H +E+
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 663 GEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
G+ AA + ELEP +A YI+LSN+ AE G W+EVE R LM+ K PG
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 227/489 (46%), Gaps = 82/489 (16%)
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EK 221
S+++ Y+ G +DA K+F+ +P D+VS N M++GY Q+ +L FF KM E
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 222 NVVSWNLMVSGFVNSGDLSSARQ--LFEKIPNPNAVSW---------VTMLCGFARHGKI 270
N +S+ ++S SA Q LF ++ + + ++ F+++ +
Sbjct: 149 NEISYGSVISA-------CSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTIINGY 326
+A ++F NV WN +IA ++ LF + D ++S+++
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 327 -----IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
+R GK+ +AR + + +D+ TA++ + G + EA ++F+++ + W
Sbjct: 262 ASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN---------------------------- 413
M++G+ +S AL++F++M + + V N
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 414 ------------TMISGYAQAGQMDSAENIFQAMEE---RNIVSWNSLITGFLQNSLYFD 458
+IS Y+++G +D +E +F+ +++ +NIV N +IT F Q+
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A++ M +EG + D+ + +G Q+H Y LKSG + DL V ++L
Sbjct: 437 AIRLFTRMLQEGLRTDEFS---VCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+Y+KCG +E + ++F I D W S+ISG+ GY EA F +ML + PD+ T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 579 FIGMLSACS 587
+L+ CS
Sbjct: 554 LAAVLTVCS 562
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 221/494 (44%), Gaps = 62/494 (12%)
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS 318
++L ++ G + +A +LFD++P +VVS N MI+ Y Q +E+++ F K+ H G
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM-HFLGFE 147
Query: 319 WSTIINGYIRVGKLDEAREVYNQMPCKDI---------AAETALMSGLIQTGRVDEASKM 369
+ I G + +++++ C E+AL+ + R ++A K+
Sbjct: 148 ANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKV 207
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISG------- 418
F + + CWN++IAG ++ DLF +M K +S +++++++
Sbjct: 208 FRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKL 267
Query: 419 ---------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
YA+ G M A +F + ++VSW +++G+
Sbjct: 268 RFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
+++ F AL+ M G + + T +Q+H ++ KSG+ D
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECVDLISW-NSLISGYALNGYAIEAFKAFKQMLSE 570
V+ ALI+MY+K G ++ +EQVF ++ + + N +I+ ++ + +A + F +ML E
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 571 EVVPDQVTFIGMLSA--CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ D+ + +LS C + G G L +V D + S L L + G L
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------SSLFTLYSKCGSL 501
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHNAS--NYITL 684
EE++ + +G+ K NA W S++ + L IG F+ M P ++ +T+
Sbjct: 502 EESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 685 SNMHAEAGRWEEVE 698
+ H R +E+
Sbjct: 561 CSSHPSLPRGKEIH 574
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 220/488 (45%), Gaps = 53/488 (10%)
Query: 32 GGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD 91
G + VF + K G + EA+ VFS + ++V++ M+S + K+ A ++F
Sbjct: 281 GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASK----LFDVMPERDNFSWALMITCYTRKG 143
+M N + ++I+ SMV EAS+ +F D+ A +I+ Y++ G
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSG 400
Query: 144 KLEKARELLELVPDKLESACWNSVIAGYA----------------KKGQFSDAEKVFNLM 187
++ + ++ E + D N +I ++ ++G +D V +L+
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
V D ++ + GYT K GL L ++ + + + + G L + +LF+
Sbjct: 461 SVLDCLNLGKQVHGYTL--KSGLVL---------DLTVGSSLFTLYSKCGSLEESYKLFQ 509
Query: 248 KIPNPNAVSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQI 301
IP + W +M+ GF +G + EA LF M P ++ ++ + + L
Sbjct: 510 GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR 569
Query: 302 DEAVKLF-IKLPHKDGVSW-STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ 359
+ + + ++ G+ S ++N Y + G L AR+VY+++P D + ++L+SG Q
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 360 TGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-----KNSV 410
G + + +F + T D+ +S++ S + + K + SV
Sbjct: 630 HGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSV 689
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+++++ Y++ G +D F + ++++W +LI + Q+ +AL+ LM +G
Sbjct: 690 G-SSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 471 KKPDQSTF 478
KPD+ TF
Sbjct: 749 FKPDKVTF 756
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 165/354 (46%), Gaps = 39/354 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
+L +S+ ++++K G + ++ +LF + ++ W +MI+G+ + EA LF M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 125 ---PERDNFSWALMITCYTRKGKLEKAREL----LELVPDK---LESACWNSVIAGYAKK 174
D + A ++T + L + +E+ L DK L SA N Y+K
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM----YSKC 599
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
G A +V++ +P D VS +S+++GY+Q+G + F M + +S +
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 235 NSGDLSSARQLFEKI----------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
+ LS L ++ P+ S ++L +++ G I + + F + +
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGS--SLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYN 340
+++W A+IA+YAQ + +EA++++ + K D V++ +++ G ++E+ N
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 341 QMPCKDIAAE------TALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAG 387
M KD E ++ L ++GR+ EA N + + D + W +++A
Sbjct: 778 SM-VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 138/300 (46%), Gaps = 20/300 (6%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
I K + ++++++++K G + ARQ++D++ + + VS +++I+GY + ++++ LF
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL-------ESACWNSVIAGYAKKG 175
M + I+ + L L V + E + +S++ Y+K G
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
D K F+ + DL+++ +++A Y Q+GK AL + M EK + G ++
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 236 S---GDL--SSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NV 285
+ G L S L + + P +V M+ R G++ EA ++M K +
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 286 VSWNAMIAAYAQDLQID---EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+ W ++AA +++ A K I+L D ++ ++ N VG+ DE E M
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G +++ + FS +L+ + ++I+ +A++GK ++A Q+++ M ++ V++
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVG 758
Query: 104 MIAGYLHNSMVEEA-----SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+++ H +VEE+ S + D E +N + M+ R G+L +A + + K
Sbjct: 759 VLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK 818
Query: 159 LESACWNSVIAGYAKKGQFS----DAEKVFNLMP 188
++ W +++A G+ A+K L P
Sbjct: 819 PDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
D+F++ +L++ Y+ G + A ++F I D++S N +ISGY + E+ + F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 569 SEEVVPDQVTFIGMLSACS--HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+++++ ++SACS A L ++ + + F E + S L+D+ +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE---SALIDVFSKNL 199
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLL-GACR 655
R E+A+ V R + AN W +++ GA R
Sbjct: 200 RFEDAYKVFRD-SLSANVYCWNTIIAGALR 228
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/712 (28%), Positives = 358/712 (50%), Gaps = 80/712 (11%)
Query: 105 IAGYLHNSMVEEASKLFDVMPE------RDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+ G N +EEA KL + M E D F AL+ C ++ + E+ ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFV-ALVRLCEWKRAQ-EEGSKVYSIALSS 123
Query: 159 LES---ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
+ S N+ +A + + G DA VF M ++L S+N ++ GY + G A+ +
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 216 EKM-----AEKNVVSWNLMVSGFVNSGDLSSARQL--------FE-KIPNPNAVSWVTML 261
+M + +V ++ ++ DL+ +++ +E I NA+ +TM
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL--ITM- 240
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGV 317
+ + G + AR LFD MP ++++SWNAMI+ Y ++ E ++LF + D +
Sbjct: 241 --YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLM 298
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQL 373
+ +++I+ +G R+++ + A + ++ + L Q G EA K+F+++
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQM------PKKNSVSW--------------- 412
+D + W +MI+G+ + D+A+D +R M P + +V+
Sbjct: 359 ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 413 ------------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
N +I+ Y++ +D A +IF + +N++SW S+I G N+
Sbjct: 419 ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
F+AL L M + +P+ T G ++H ++L++G D F+ N
Sbjct: 479 RCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN 537
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MY +CGR+ +A F + + D+ SWN L++GY+ G + F +M+ V P
Sbjct: 538 ALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D++TFI +L CS + + QGL F M ED+ + P +HY+C+VDLLGR G L+EA
Sbjct: 597 DEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
++ M V + +WG+LL ACR+H +++GE +A + EL+ + YI L N++A+ G+W
Sbjct: 656 IQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKW 715
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIG 746
EV ++R +M++ GCSW+EV+ ++ FLSDD + + I +L G
Sbjct: 716 REVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEG 767
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/502 (20%), Positives = 203/502 (40%), Gaps = 95/502 (18%)
Query: 8 DDTRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNL 67
D RG+ + + ++L I + N I K G V+ A +F +++
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVV--------NALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 68 VTYNSMISVFAKNGKISDARQLF----------DKMSQRNLVS----------------- 100
+++N+MIS + +NG + +LF D M+ +++S
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 101 ------------WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA 148
N++ YL+ EA KLF M +D SW MI+ Y +KA
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 149 RELLELV------PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY----NSM 198
+ ++ PD++ A +V++ A G ++ L L+SY N++
Sbjct: 383 IDTYRMMDQDSVKPDEITVA---AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---NPNAV 255
+ Y++ + AL F + KNV+SW +++G + A ++ PNA+
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAI 499
Query: 256 SWV----------TMLCGFARHGKITEAR-RLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
+ ++CG H + L D +P NA++ Y + +++ A
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-------NALLDMYVRCGRMNTA 552
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQT 360
F KD SW+ ++ GY G+ E++++M + + +L+ G ++
Sbjct: 553 WSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 361 GRVDEA----SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTM 415
V + SKM + T + + ++ ++G + EA ++MP + W +
Sbjct: 612 QMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671
Query: 416 ISGYAQAGQMD----SAENIFQ 433
++ ++D SA++IF+
Sbjct: 672 LNACRIHHKIDLGELSAQHIFE 693
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 139/316 (43%), Gaps = 23/316 (7%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTY----NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
LG ++ V + I L++Y N++I++++K I A +F + ++N++SW ++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 105 IAGYLHNSMVEEASKLFDVMP---ERDNFSWALMITCYTRKGKLEKARELLELVPDK--- 158
IAG N+ EA M + + + + R G L +E+ V
Sbjct: 471 IAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG 530
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
L+ N+++ Y + G+ + A FN KD+ S+N +L GY++ G+ + + F++M
Sbjct: 531 LDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRM 589
Query: 219 AEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
+ V +++ ++ G S + F K+ + PN + ++ R G++
Sbjct: 590 VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGEL 649
Query: 271 TEARRLFDSMPC-KNVVSWNAMIAAYAQDLQID---EAVKLFIKLPHKDGVSWSTIINGY 326
EA + MP + W A++ A +ID + + +L K + + N Y
Sbjct: 650 QEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLY 709
Query: 327 IRVGKLDEAREVYNQM 342
GK E +V M
Sbjct: 710 ADCGKWREVAKVRRMM 725
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 230/827 (27%), Positives = 390/827 (47%), Gaps = 87/827 (10%)
Query: 10 TRGENHKIKMTSMKHKLTIGSIGGKHVF----NKNQQIIHLGKLGKVEEAVRVFSNTIHK 65
+R HK + ++ + G ++ F Q+I +G L + +F +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 66 NLVTYNSMISVFAKN-GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+ V N +IS++ K G + A F + +N VSWN++I+ Y A ++F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 125 ------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA-------CWNSVIAGY 171
P F + C E LLE + ++ + + +++ +
Sbjct: 198 QYDGSRPTEYTFGSLVTTAC----SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF---EKMAEKNVVSWNL 228
AK G S A KVFN M ++ V+ N ++ G + A F M + + S+ +
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 229 MVSGF-----VNSGDLSSARQLFEKIPNPNAVSWVT-----MLCGFARHGKITEARRLFD 278
++S F L R++ + V ++ ++ +A+ G I +ARR+F
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWS-TIINGYIRVGKLDEAR- 336
M K+ VSWN+MI Q+ EAV+ + + D + S T+I+ L A+
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 337 ------EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
E +++ ALM+ +TG ++E K+F+ + D + WNS+I +
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 391 SGR-MDEALDLF----RQMPKKNSVSW--------------------------------- 412
S R + EA+ F R K N +++
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 413 --NTMISGYAQAGQMDSAENIFQAM-EERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
N +I+ Y + G+MD E IF M E R+ V+WNS+I+G++ N L AL + M +
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G++ D + + G ++H +++ +D+ V +AL+ MY+KCGR++ A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM-LSEEVVPDQVTFIGMLSACSH 588
+ F + + SWNS+ISGYA +G EA K F+ M L + PD VTF+G+LSACSH
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
AGL +G F+ M + + + P EH+SC+ D+LGR G L++ + + M +K N +W
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 649 SLLGA-CRVH-KNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
++LGA CR + + E+G+ AA L +LEP NA NY+ L NM+A GRWE++ + R M+D
Sbjct: 794 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRD 753
K G SW+ +++ + F++ D + I L ++ +RD
Sbjct: 854 ADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 177/739 (23%), Positives = 315/739 (42%), Gaps = 124/739 (16%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R++ N + K++ N++I+ + + G AR++FD+M RN VSW +++GY N +E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
A M + FS Y L +E+ + ++ G G
Sbjct: 86 ALVFLRDMVKEGIFS-----NQYAFVSVLRACQEIGSV-----------GILFGRQIHGL 129
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQN-GKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
+F L D V N +++ Y + G +G AL F + KN VSWN ++S +
Sbjct: 130 ------MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 236 SGDLSSARQLFEKI----PNPNAVSW---VTMLC-------------------------- 262
+GD SA ++F + P ++ VT C
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 263 --------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK 314
FA+ G ++ AR++F+ M +N V+ N ++ + +EA KLF+ +
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 315 DGV---SWSTIINGYI------RVGKLDEAREVYNQMPCKD-----IAAETALMSGLIQT 360
V S+ +++ + VG L + REV+ + + L++ +
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN------------ 408
G + +A ++F ++ +D++ WNSMI G Q+G EA++ ++ M + +
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 409 ----SVSW-----------------------NTMISGYAQAGQMDSAENIFQAMEERNIV 441
S+ W N +++ YA+ G ++ IF +M E + V
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 482
Query: 442 SWNSLITGFLQNSLYF-DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
SWNS+I ++ +A+ + R G+K ++ TF ++G Q+H
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGL 542
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI-ECVDLISWNSLISGYALNGYAIE 559
LK+ ++ NALIA Y KCG ++ E++F+ + E D ++WNS+ISGY N +
Sbjct: 543 ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK 602
Query: 560 AFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
A ML D + +LSA + +G+++ C V +E S LV
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALV 661
Query: 620 DLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHN 677
D+ + GRL+ A M V+ N+ W S++ H E + F M+L P +
Sbjct: 662 DMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 678 ASNYITLSNMHAEAGRWEE 696
++ + + + AG EE
Sbjct: 721 HVTFVGVLSACSHAGLLEE 739
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
H + K+ D+++ N LI Y + G SA +VF + + +SW ++SGY+ NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
EA + M+ E + +Q F+ +L AC G
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 215/769 (27%), Positives = 375/769 (48%), Gaps = 84/769 (10%)
Query: 59 FSNTIHKNLVTY---------NSMISVFAKNGKISDARQLFDKMSQ-------RNLVSWN 102
+ TIH ++V S+++++ K G + A Q+FD SQ R++ WN
Sbjct: 78 YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 103 TMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKL--EKARELLE-LV 155
+MI GY +E F M D FS +++++ ++G E+ +++ ++
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
Query: 156 PDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNG--KMGL 210
+ L++ + ++I Y K G DA +VF + K ++V +N M+ G+ +G + L
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 211 ALHFFEKMAEKNVVSWNLM--VSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
L+ K +VS + + S + RQ+ + + + ++L +
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWS 320
++ G + EA +F + K + WNAM+AAYA++ A+ LF + K D + S
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAA----ETALMSGLIQTGRVDEASKMFNQLSTR 376
+I+ +G + + V+ ++ + I + E+AL++ + G +A +F + +
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----------------------------- 407
D + W S+I+G C++G+ EAL +F M
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 408 ------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
N +++I Y++ G + A +F +M N+V+WNS+I+ + +N+L
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
++ LM +G PD + G LH Y L+ G +D + NA
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNA 617
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
LI MY KCG + AE +F ++ LI+WN +I GY +G I A F +M PD
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VTF+ ++SAC+H+G +G ++F+ M +D+ IEP EHY+ +VDLLGR G LEEA++ +
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M ++A++ +W LL A R H N+E+G +A +L +EP S Y+ L N++ EAG
Sbjct: 738 KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKN 797
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS-DDSGRLRPETIQII 743
E +L LM++K K PGCSWIEV ++ F S S ++ E ++
Sbjct: 798 EAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVL 846
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 193/415 (46%), Gaps = 52/415 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G V EA VFS + K L +N+M++ +A+N A LF M Q++
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS---------- 368
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL-LELV--PDKLESACW 164
V+P D+F+ + +I+C + G + + EL P + S
Sbjct: 369 ---------------VLP--DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN-- 222
++++ Y+K G DA VF M KD+V++ S+++G +NGK AL F M + +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 223 -VVSWNLMVSGFVNSGDLSSAR---QLFEKIPNPNAVSWV----TMLCGFARHGKITEAR 274
++M S L + R Q+ + V V +++ +++ G A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVG 330
++F SM +N+V+WN+MI+ Y+++ + ++ LF + + D VS ++++
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIA 386
L + + ++ I ++T L + LI + G A +F ++ + I WN MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 387 GFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
G+ G AL LF +M K + V++ ++IS +G ++ +NIF+ M++
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 206/465 (44%), Gaps = 60/465 (12%)
Query: 42 QIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
++ L GK A +F I ++++++++K G DA +F M ++++V+W
Sbjct: 384 SVLGLYNYGKSVHA-ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNF---SWALMITCYTRKGKLEKARELLELVPDK 158
++I+G N +EA K+F M + D+ +M + LE R L++
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 159 LESACWNSVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+++ +V G Y+K G A KVF M +++V++NSM++ Y++N L++
Sbjct: 503 IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSI 562
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE 272
F NLM+S + +F P++VS ++L + + +
Sbjct: 563 DLF-----------NLMLS-----------QGIF-----PDSVSITSVLVAISSTASLLK 595
Query: 273 ARRLFD-----SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYI 327
+ L +P + NA+I Y + A +F K+ HK ++W+ +I GY
Sbjct: 596 GKSLHGYTLRLGIPSDTHLK-NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 328 RVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN- 382
G A ++++M D +L+S +G V+E +F + I N
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 383 ----SMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMD----SAENIFQ 433
+M+ ++G ++EA + MP + +S W ++S ++ SAE + +
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR 774
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG--KKPDQS 476
ER ++ LI +++ L +A K L LM +G K+P S
Sbjct: 775 MEPERG-STYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 39/322 (12%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
+VF + I K G E A++VF++ +N+V +NSMIS +++N + LF+ M
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
+ + + I L A+ T KGK L
Sbjct: 570 SQGIFPDSVSITSVL----------------------VAISSTASLLKGKSLHGYTLRLG 607
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
+P ++ N++I Y K G AE +F M K L+++N M+ GY +G AL
Sbjct: 608 IPS--DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 215 FEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFA 265
F++M + + V++ ++S +SG + + +FE + PN + M+
Sbjct: 666 FDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLG 725
Query: 266 RHGKITEARRLFDSMPCKNVVS-WNAMIAA----YAQDLQIDEAVKLFIKLPHKDGVSWS 320
R G + EA +MP + S W +++A + +L I A KL P + G ++
Sbjct: 726 RAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER-GSTYV 784
Query: 321 TIINGYIRVGKLDEAREVYNQM 342
+IN Y+ G +EA ++ M
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLM 806
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 122/315 (38%), Gaps = 51/315 (16%)
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS---TFXXXXXXXXXXXXXQVGNQLH 498
S NS I +Q Y AL + +G P + TF G +H
Sbjct: 26 SINSGIRALIQKGEYLQALH--LYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-------TAIECVDLISWNSLISGY 551
++ G+ D F++ +L+ MY KCG ++ A QVF + + D+ WNS+I GY
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG--LANQGLDLFKCMVEDFAIE 609
E F++ML V PD + ++S G +G + M+ + +++
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLD 202
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL------------------- 650
+ + L+D+ + G +A+ V ++ K+N LW +
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 651 ----------------LGACRVHKNLEIGEFAAMRLSELEPHNASNYIT-LSNMHAEAGR 693
LGAC +N G + ++ HN T L +M+++ G
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 694 WEEVERLRVLMRDKR 708
E E + + DKR
Sbjct: 323 VGEAETVFSCVVDKR 337
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
+ L +G H+ KN I K G + A +F HK+L+T+N MI + +G
Sbjct: 602 YTLRLGIPSDTHL--KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 84 SDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMP-----ERDNFSWAL 134
A LFD+M + + V++ ++I+ H+ VEE +F+ M E + +A
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN 719
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS----DAEKVFNLMPVK 190
M+ R G LE+A ++ +P + +S+ W +++ AEK+ + P +
Sbjct: 720 MVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+Y ++ Y + G A M EK +
Sbjct: 780 G-STYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/572 (32%), Positives = 297/572 (51%), Gaps = 35/572 (6%)
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI-------PNPNAVSWVTMLCGFARHGKITEAR 274
N+ SWN+ + GF S + + L++++ P+ ++ + K+
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLF-------KVCADL 169
Query: 275 RL--FDSMPCKNVVSW---------NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
RL M +V+ NA I +A ++ A K+F + P +D VSW+ +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-------GRVDEASKMFNQLSTR 376
NGY ++G+ ++A VY M + + + M GL+ + R E + + R
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 377 DTICW-NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
TI N+++ F + G + EA +F + K+ VSW TMISGYA+ G +D + +F M
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN 495
EE+++V WN++I G +Q DAL M KPD+ T VG
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
+H YI K ++ + +L+ MYAKCG + A VF I+ + +++ ++I G AL+G
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
A A F +M+ + PD++TFIG+LSAC H G+ G D F M F + P +HY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP 675
S +VDLLGR G LEEA ++ M ++A+A +WG+LL CR+H N+E+GE AA +L EL+P
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 676 HNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRL 735
++ Y+ L M+ EA WE+ +R R +M ++ K+PGCS IEV + F+ D R
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 736 RPETIQIILIGISADIRDKFNVFNMLSVFDIS 767
E I L + +R +V + S ++I+
Sbjct: 650 ESEKIYDRLHCLGRHMRSSLSV--LFSEYEIT 679
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 189/394 (47%), Gaps = 25/394 (6%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER- 127
+N+ I +FA G + +AR++FD+ R+LVSWN +I GY E+A ++ +M
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG 252
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAE 181
D+ + +++ + G L + +E E V + ++ N+++ ++K G +A
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEAR 312
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
++F+ + + +VS+ +M++GY + G + ++ F+ M EK+VV WN M+ G V +
Sbjct: 313 RIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD 372
Query: 242 ARQLFEKI----PNPNAVSWVTMLCGFARHGKITEA----RRLFDSMPCKNVVSWNAMIA 293
A LF+++ P+ ++ + L ++ G + R + NV +++
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE--- 350
YA+ I EA+ +F + ++ ++++ II G G A +N+M IA +
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 351 -TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQM 404
L+S G + F+Q+ +R + ++ M+ ++G ++EA L M
Sbjct: 493 FIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 405 P-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
P + ++ W ++ G G ++ E + + E
Sbjct: 553 PMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE 586
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 186/419 (44%), Gaps = 75/419 (17%)
Query: 88 QLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMI-TCY 139
++ + N+ SWN I G+ + +E+ L+ M D+F++ ++ C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 140 TRK---------GKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK 190
+ G + K R LELV S N+ I +A G +A KVF+ PV+
Sbjct: 168 DLRLSSLGHMILGHVLKLR--LELV-----SHVHNASIHMFASCGDMENARKVFDESPVR 220
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-------------- 236
DLVS+N ++ GY + G+ A++ ++ M + V ++ + G V+S
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 237 -------------------------GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
GD+ AR++F+ + VSW TM+ G+AR G +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYI 327
+R+LFD M K+VV WNAMI Q + +A+ LF ++ D ++ ++
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNS 383
++G LD ++ + ++ AL + L+ + G + EA +F+ + TR+++ + +
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 384 MIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+I G G A+ F +M + +++ ++S G + + + F M+ R
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + EA R+F N + +V++ +MIS +A+ G + +R+LFD M ++++V WN MI G
Sbjct: 304 KCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 108 YLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKA---RELLELVPDKLE 160
+ ++A LF M + D + ++ ++ G L+ +E L
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 161 SACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
A S++ YAK G S+A VF+ + ++ ++Y +++ G +G A+ +F +M +
Sbjct: 424 VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID 483
Query: 221 KNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKIT 271
+ +++ ++S + G + + R F ++ NP + M+ R G +
Sbjct: 484 AGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLE 543
Query: 272 EARRLFDSMPCK-NVVSWNAMI 292
EA RL +SMP + + W A++
Sbjct: 544 EADRLMESMPMEADAAVWGALL 565
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 420 AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG---KKPDQS 476
+++ +D + I + +E NI SWN I GF ++ ++ M R G +PD
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 157
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ +G+ + ++LK V NA I M+A CG +E+A +VF
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
DL+SWN LI+GY G A +A +K M SE V PD VT IG++S+CS G N+G
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ ++ V++ + + L+D+ + G + EA + ++ +
Sbjct: 278 EFYE-YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/676 (29%), Positives = 337/676 (49%), Gaps = 89/676 (13%)
Query: 141 RKGKLEKAREL-LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP---VKDLVSYN 196
R GKL AR + ++ PD S +NS+I+ Y+K G + AE VF M +D+VS++
Sbjct: 79 RLGKLVHARLIEFDIEPD---SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWS 135
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV---------SGFVNSGDLSSARQLFE 247
+M+A Y NG+ A+ F + E +V + S FV G ++ +
Sbjct: 136 AMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT 195
Query: 248 KIPNPNAVSWVTMLCGFAR-HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
+ +++ F + A ++FD M NVV+W MI Q EA++
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 307 LFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-- 360
F+ + D + S++ + + L +++++ A+ SGL+
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW----------AIRSGLVDDVE 305
Query: 361 -------------GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM-DEALDLFRQM-- 404
G VD+ K+F+++ + W ++I G+ ++ + EA++LF +M
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 405 -----------------------PK---------------KNSVSWNTMISGYAQAGQMD 426
P+ NS N++IS + ++ +M+
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
A+ F+++ E+N+VS+N+ + G +N + A K L + TF
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNS 546
+ G Q+H ++K G + V NALI+MY+KCG +++A +VF +E ++ISW S
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
+I+G+A +G+AI + F QM+ E V P++VT++ +LSACSH GL ++G F M ED
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFA 666
I+P EHY+C+VDLL R G L +AF + M +A+ +W + LGACRVH N E+G+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQC 726
A ++ EL+P+ + YI LSN++A AG+WEE +R M+++ K GCSWIEV ++I
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 727 FLSDDSGRLRPETIQI 742
F D+ P QI
Sbjct: 726 FYVGDTA--HPNAHQI 739
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 231/501 (46%), Gaps = 71/501 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM---SQRNLVSWNTM 104
+LGK+ A R+ I + V YNS+IS+++K+G + A +F+ M +R++VSW+ M
Sbjct: 79 RLGKLVHA-RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 105 IAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELV--PDK 158
+A Y +N +A K+F E +++ + +I + + R L +
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197
Query: 159 LES-ACWNSVIAGYAKKGQ--FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
ES C + KG+ F +A KVF+ M ++V++ M+ Q G A+ FF
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 216 EKMA----EKNVVSWNLMVSGFVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCGFAR 266
M E + + + + S +LS +QL + + S V M +
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSA 317
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI-DEAVKLFIKLPHKDGVSWS--TII 323
G + + R++FD M +V+SW A+I Y ++ + EA+ LF ++ + V + T
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 324 NGYIRVGKLDEAR---EVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR 376
+ + G L + R +V Q + +A+ + +++S +++ R+++A + F LS +
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----------------------------- 407
+ + +N+ + G C++ ++A L ++ ++
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 408 ----------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
N N +IS Y++ G +D+A +F ME RN++SW S+ITGF ++
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 458 DALKSLVLMGREGKKPDQSTF 478
L++ M EG KP++ T+
Sbjct: 558 RVLETFNQMIEEGVKPNEVTY 578
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 192/397 (48%), Gaps = 31/397 (7%)
Query: 72 SMISVFAKN-GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
S+I +F K +A ++FDKMS+ N+V+W MI + EA + F M E
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266
Query: 127 RDNFSWALMITCYTRKGKLEKARELLE-LVPDKLESACWNSVIAGYAK---KGQFSDAEK 182
D F+ + + + L ++L + L S++ YAK G D K
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRK 326
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGL-ALHFFEKMAEKNVVSWNLMV--SGFVNSGDL 239
VF+ M ++S+ +++ GY +N + A++ F +M + V N S F G+L
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 240 SSAR-------QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
S R Q F++ N+ +++ F + ++ +A+R F+S+ KN+VS+N +
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL 446
Query: 293 AAYAQDLQIDEAVKLFIKLPHKD-GVS---WSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++L ++A KL ++ ++ GVS ++++++G VG + + ++++Q+ ++
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 349 AETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+ + LI + G +D AS++FN + R+ I W SMI GF + G L+ F QM
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 405 ----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
K N V++ ++S + G + F +M E
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 195/417 (46%), Gaps = 61/417 (14%)
Query: 72 SMISVFAK---NGKISDARQLFDKMSQRNLVSWNTMIAGYLHN-SMVEEASKLFDVM--- 124
S++ ++AK +G + D R++FD+M +++SW +I GY+ N ++ EA LF M
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 125 --PERDNFSWALMITCYTRKGKLEKARELLELVPDKLE------SACWNSVIAGYAKKGQ 176
E ++F+++ + + G L R +++ + S+ NSVI+ + K +
Sbjct: 367 GHVEPNHFTFS---SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSG 232
DA++ F + K+LVSYN+ L G +N A ++ E+ + ++ ++SG
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 233 FVNSGDLSSARQLFEKIP-------NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
N G + Q+ ++ P + ++M +++ G I A R+F+ M +NV
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM---YSKCGSIDTASRVFNFMENRNV 540
Query: 286 VSWNAMIAAYAQ-----------DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDE 334
+SW +MI +A+ + I+E VK P++ V++ I++ VG + E
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVK-----PNE--VTYVAILSACSHVGLVSE 593
Query: 335 AREVYNQM----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR-DTICWNSMIAGF 388
+N M K A M L+ + G + +A + N + + D + W + + G
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL-GA 652
Query: 389 CQSGRMDE----ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
C+ E A ++ ++ + + YA AG+ + + + + M+ERN+V
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 709
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 159/315 (50%), Gaps = 22/315 (6%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+ F + N NS+IS+F K+ ++ DA++ F+ +S++NLVS+NT + G N E+
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 117 ASKLFDVMPERD----NFSWALMITCYTRKGKLEKARELLELVPDKLESAC----WNSVI 168
A KL + ER+ F++A +++ G + K ++ V KL +C N++I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALI 516
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----V 224
+ Y+K G A +VFN M ++++S+ SM+ G+ ++G L F +M E+ V V
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEV 576
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFARHGKITEARRLFDS 279
++ ++S + G +S + F + P + M+ R G +T+A ++
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 280 MPCK-NVVSWNAMIAA--YAQDLQIDE-AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEA 335
MP + +V+ W + A + ++ + A + ++L + ++ + N Y GK +E+
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 336 REVYNQMPCKDIAAE 350
E+ +M +++ E
Sbjct: 697 TEMRRKMKERNLVKE 711
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 459 ALKSLVLMGREGKKP-DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
A+ +L LM R+G +P D TF ++G +H +++ D + N+LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 518 AMYAKCGRVESAEQVFTAIECV---DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
++Y+K G AE VF + D++SW+++++ Y NG ++A K F + L +VP
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 575 DQVTFIGMLSACSHAGLANQG 595
+ + ++ ACS++ G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
N I K G ++ A RVF+ ++N++++ SMI+ FAK+G + F++M +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 97 -NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
N V++ +++ H +V E + F+ M E +A M+ R G L A E
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 151 LLELVPDKLESACWNSVIAGY-----AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
+ +P + + W + + + G+ + A K+ L P + +Y + Y
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLA-ARKILELDP-NEPAAYIQLSNIYACA 690
Query: 206 GKMGLALHFFEKMAEKNVV 224
GK + KM E+N+V
Sbjct: 691 GKWEESTEMRRKMKERNLV 709
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/611 (29%), Positives = 328/611 (53%), Gaps = 26/611 (4%)
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+IA Y+ F+DA+ V +P + S++S++ T+ ++ F +M ++
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV--------TMLCGFARHGKITEARRLFD 278
+ ++ SA ++ ++I + VS + +M + R G++ +AR++FD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDE 334
M K+VV+ +A++ AYA+ ++E V++ ++ + VSW+ I++G+ R G E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 335 AREVYNQMP----CKDIAAETALM-----SGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
A ++ ++ C D ++++ S ++ GR+ + Q +D ++MI
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY-VIKQGLLKDKCVISAMI 294
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIV 441
+ +SG + + LF Q + N I+G ++ G +D A +F+ +E+ N+V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SW S+I G QN +AL+ M G KP+ T G H +
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
++ ++++ V +ALI MYAKCGR+ ++ VF + +L+ WNSL++G++++G A E
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
F+ ++ + PD ++F +LSAC GL ++G FK M E++ I+P EHYSC+V+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY 681
LGR G+L+EA+++++ M + ++ +WG+LL +CR+ N+++ E AA +L LEP N Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 682 ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQ 741
+ LSN++A G W EV+ +R M K PGCSWI+V+N++ L+ D + + I
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQIT 654
Query: 742 IILIGISADIR 752
+ IS ++R
Sbjct: 655 EKMDEISKEMR 665
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 200/453 (44%), Gaps = 79/453 (17%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+GK V S + + SM ++ + G++ DAR++FD+MS +++V+ + ++
Sbjct: 133 KVGKQIHCVSCVSG-LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 108 YLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLE------LVPD 157
Y +EE ++ M E + SW +++ + R G ++A + + PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 158 K-------------------------------LESAC-WNSVIAGYAKKGQFSDAEKVFN 185
+ L+ C +++I Y K G +FN
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSS 241
+ + N+ + G ++NG + AL FE E+ NVVSW +++G +G
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 242 ARQLFEKIP----NPNAVSWVTML--CG---FARHGKITEA----RRLFDSMPCKNVVSW 288
A +LF ++ PN V+ +ML CG HG+ T L D NV
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-----NVHVG 426
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM------ 342
+A+I YA+ +I+ + +F +P K+ V W++++NG+ GK E ++ +
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEA 397
P D + T+L+S Q G DE K F +S I ++ M+ ++G++ EA
Sbjct: 487 P--DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 398 LDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE 429
DL ++MP + +S W +++ +D AE
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 30/323 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
GK G V + +F+ N+ I+ ++NG + A ++F+ ++ N+VSW
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 103 TMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLEL---- 154
++IAG N EA +LF M + ++ + M+ L R
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 155 -VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ D + +++I YAK G+ + ++ VFN+MP K+LV +NS++ G++ +GK +
Sbjct: 418 HLLDNVHVG--SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 214 FFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGF 264
FE + + + +S+ ++S G + F+ + P + M+
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 265 ARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQID----EAVKLFIKLPHKDGVSW 319
R GK+ EA L MP + + W A++ + +D A KLF P G ++
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG-TY 594
Query: 320 STIINGYIRVGKLDEAREVYNQM 342
+ N Y G E + N+M
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKM 617
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 279/504 (55%), Gaps = 16/504 (3%)
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL- 311
N+ V ++ +A + AR++FD +P +NV+ N MI +Y + E VK+F +
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 312 ---PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVD 364
D ++ ++ G + R+++ +++ + +GL+ + G +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-KNSVSWNTMISGYAQAG 423
EA + +++S RD + WNS++ G+ Q+ R D+AL++ R+M K S TM S
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 424 QMDS-----AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ +++F M ++++VSWN +I +++N++ +A++ M +G +PD +
Sbjct: 253 NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
+G ++H YI + I +L + NALI MYAKCG +E A VF ++
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D++SW ++IS Y +G +A F ++ +VPD + F+ L+ACSHAGL +G
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
FK M + + I P EH +C+VDLLGR G+++EA+ ++ M ++ N +WG+LLGACRVH
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 659 NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
+ +IG AA +L +L P + Y+ LSN++A+AGRWEEV +R +M+ K K PG S +
Sbjct: 493 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Query: 719 EVQNQIQCFLSDDSGRLRPETIQI 742
EV I FL D R P++ +I
Sbjct: 553 EVNRIIHTFLVGD--RSHPQSDEI 574
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 206/484 (42%), Gaps = 106/484 (21%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERD 128
++ +A ++ AR++FD++ +RN++ N MI Y++N E K+F M D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 129 NFSWALMITCYTRKGKLEKARELL-ELVPDKLESACW--NSVIAGYAKKGQFSDAEKVFN 185
++++ ++ + G + R++ L S + N +++ Y K G S+A V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALH-------------------------------- 213
M +D+VS+NS++ GY QN + AL
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 214 -----FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTML--C 262
F KM +K++VSWN+M+ ++ + A +L+ ++ P+AVS ++L C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 263 G---------------------------------FARHGKITEARRLFDSMPCKNVVSWN 289
G +A+ G + +AR +F++M ++VVSW
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMP-- 343
AMI+AY + +AV LF KL D +++ T + G L+E R + M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 344 ---CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGRMDE--- 396
+ ++ L + G+V EA + +S + W +++ G C+ +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL-GACRVHSDTDIGL 498
Query: 397 -ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI--------VSWNSLI 447
A D Q+ + S + + + YA+AG+ + NI M+ + + V N +I
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
Query: 448 TGFL 451
FL
Sbjct: 559 HTFL 562
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 57/372 (15%)
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVF 184
P+ F ++ Y L + L + S+ ++ YA + A KVF
Sbjct: 38 PQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVF 97
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLS 240
+ +P ++++ N M+ Y NG G + F M NV ++ ++ SG +
Sbjct: 98 DEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIV 157
Query: 241 SARQLFEKIPNPNAVSWVTMLCG------FARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
R++ S T+ G + + G ++EAR + D M ++VVSWN+++
Sbjct: 158 IGRKIHGSATKVGLSS--TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 295 YAQDLQIDEAVK-------------------------------------LFIKLPHKDGV 317
YAQ+ + D+A++ +F K+ K V
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLV 275
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQL 373
SW+ +I Y++ EA E+Y++M D + T+++ T + K+ +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 374 STRDTI----CWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAE 429
+ I N++I + + G +++A D+F M ++ VSW MIS Y +G+ A
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 430 NIFQAMEERNIV 441
+F +++ +V
Sbjct: 396 ALFSKLQDSGLV 407
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 160/374 (42%), Gaps = 67/374 (17%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDA--------- 86
+F N + GK G + EA V +++V++NS++ +A+N + DA
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 87 ----------------------------RQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+ +F KM +++LVSWN MI Y+ N+M EA
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 119 KLFDVMPERDNFSW-ALMIT----------CYTRKGKLEKARELLELVPDKLESACWNSV 167
+L+ M E D F A+ IT + K+ E +L+P+ L N++
Sbjct: 295 ELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE---NAL 350
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV--- 224
I YAK G A VF M +D+VS+ +M++ Y +G+ A+ F K+ + +V
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 225 -SWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFD 278
++ ++ ++G L R F+ + + P M+ R GK+ EA R
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 279 SMPCK-NVVSWNAMIAAYA----QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLD 333
M + N W A++ A D+ + A KLF P + G + + N Y + G+ +
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWE 529
Query: 334 EAREVYNQMPCKDI 347
E + N M K +
Sbjct: 530 EVTNIRNIMKSKGL 543
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/615 (28%), Positives = 315/615 (51%), Gaps = 29/615 (4%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AE 220
S IA AK G+ + A +VF+ MP D V++N+ML Y++ G A+ F ++ A+
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-------PNAVSWVTMLCGFARHGKITEA 273
+ S+ ++S + G++ R++ + P S + M + + A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDM---YGKCSDTLSA 124
Query: 274 RRLFDSMPC--KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGK 331
++F M C +N V+W +++ AY Q + A+ +F+++P + +W+ +I+G+ GK
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI--CW-------N 382
L+ ++ +M + + S L+ D ++ ++ ++ + W N
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
S+++ + + G D+A+ + VSWN++I + G+ + A +F E+NIV+
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
W ++ITG+ +N AL+ V M + G D + G +H ++
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
G+ +V NAL+ +YAKCG ++ A++ F I DL+SWN+++ + ++G A +A K
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
+ M++ + PD VTFIG+L+ CSH+GL +G +F+ MV+D+ I +H +C++D+
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 623 GRMGRLEEAFNVVRGMDV----KANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
GR G L EA ++ +N W +LLGAC H + E+G + L EP
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEE 544
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
+++ LSN++ GRW+E E +R M ++ K PGCSWIEV NQ+ F+ DS R E
Sbjct: 545 MSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLE 604
Query: 739 TIQIILIGISADIRD 753
+ L + ++R+
Sbjct: 605 ELSETLNCLQHEMRN 619
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 202/463 (43%), Gaps = 96/463 (20%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----- 121
LV S I+ AK+G+I+ ARQ+FD M + + V+WNTM+ Y + +EA LF
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 122 -DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACW---NSVIAGYAKKGQF 177
D P D++S+ +++ G ++ R++ LV A NS+I Y K
Sbjct: 64 SDAKP--DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 178 SDAEKVFNLMPV--KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
A KVF M ++ V++ S+L Y + AL F +M ++ +WN+M+SG +
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 236 SGDLSSARQLFEKI------PNPNAVSWVTMLCG-------------------------- 263
G L S LF+++ P+ S + C
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 264 --------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD 315
+ + G +A R +S+ VSWN++I A + + ++A+++F P K+
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQM-----------------PCKDIA---------- 348
V+W+T+I GY R G ++A + +M C +A
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 349 ------------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
AL++ + G + EA + F ++ +D + WN+M+ F G D+
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 397 ALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
AL L+ M K ++V++ +++ + +G ++ IF++M
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 178/418 (42%), Gaps = 71/418 (16%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM--SQRNLVSWNTMIAGYLHNSMVEEASKLFDV 123
+L NS+I ++ K A ++F M RN V+W +++ Y++ E A +F
Sbjct: 104 SLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVE 163
Query: 124 MPERDNFSWALMITCYTRKGKLEKA----RELLE--LVPD-----KLESAC--------- 163
MP+R F+W +MI+ + GKLE +E+LE PD L +AC
Sbjct: 164 MPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 164 ------------W-------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
W NSV++ Y K G DA + + V VS+NS++ +
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN------AVSWV 258
G+ AL F EKN+V+W M++G+ +GD A + F ++ A V
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 259 TMLC-GFA--RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD 315
C G A HGK+ + V NA++ YA+ I EA + F + +KD
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVG-NALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMFN 371
VSW+T++ + G D+A ++Y+ M I + GL+ T G V+E +F
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 372 Q--------LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMI 416
L C MI F + G + EA DL N+ SW T++
Sbjct: 463 SMVKDYRIPLEVDHVTC---MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 51/340 (15%)
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
V + I+ A++G++ SA +F M E + V+WN+++T + + L+ +A+ +
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
KPD +F + G ++ +++SG+ L V+N+LI MY KC SA
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 530 EQVFTAIEC------------------------VDL---------ISWNSLISGYALNGY 556
+VF + C +D+ +WN +ISG+A G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE----PLA 612
FK+ML E PD TF +++ACS A+ ++ MV ++
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF-AAMRLS 671
E + ++ ++G ++A + ++V W S++ AC ++IGE A+ +
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDAC-----MKIGETEKALEVF 294
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVER-LRVLMRDKRAG 710
L P N +T + M GR + E+ LR + ++G
Sbjct: 295 HLAPEK--NIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 24/345 (6%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
M H + + + V KN + KLG ++A+R + V++NS+I K G
Sbjct: 226 MVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIG 285
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMIT 137
+ A ++F ++N+V+W TMI GY N E+A + F M + D+F++ ++
Sbjct: 286 ETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 345
Query: 138 CYTRKGKLEKARELLE-LVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
+ L + + L+ + + N+++ YAK G +A++ F + KDLVS
Sbjct: 346 ACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS 405
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV----NSGDLSSARQLFEKIP 250
+N+ML + +G AL ++ M + N+ G + +SG + +FE +
Sbjct: 406 WNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMV 465
Query: 251 N----PNAVSWVT-MLCGFARHGKITEARRL---FDSM--PCKNVVSWNAMIAAYAQDLQ 300
P V VT M+ F R G + EA+ L + S+ N SW ++ A +
Sbjct: 466 KDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWH 525
Query: 301 ID---EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+ E K+ + +S+ + N Y G+ E +V +M
Sbjct: 526 TELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 311/594 (52%), Gaps = 27/594 (4%)
Query: 187 MPV-----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWNLMVSGFVNSGDLS 240
MP+ + + S L+ + ++ A+ E + ++ + + ++L+ S GD
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 241 SARQ--------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
S +Q PN + ++ + + GK +A ++FD M +N+ SWN M+
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+ Y + + A +F +P +D VSW+T++ GY + G L EA Y + I
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 353 LMSGLIQTGRVDEASKMFNQLS---------TRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
+GL+ T V N+ + + + S+I + + G+M+ A F +
Sbjct: 181 SFAGLL-TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
M K+ W T+ISGYA+ G M++AE +F M E+N VSW +LI G+++ AL
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M G KP+Q TF + G ++H Y++++ + V ++LI MY+K
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 524 GRVESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
G +E++E+VF + D + WN++IS A +G +A + M+ V P++ T + +
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
L+ACSH+GL +GL F+ M I P EHY+CL+DLLGR G +E + M +
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEP 479
Query: 643 NAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRV 702
+ +W ++LG CR+H N E+G+ AA L +L+P +++ YI LS+++A+ G+WE VE+LR
Sbjct: 480 DKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRG 539
Query: 703 LMRDKRAGKLPGCSWIEVQNQIQCF-LSDDS-GRLRPETIQIILIGISADIRDK 754
+M+ +R K SWIE++ +++ F +SD S R E I IL ++A I ++
Sbjct: 540 VMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEE 593
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 205/433 (47%), Gaps = 29/433 (6%)
Query: 12 GENHKIKMTSMKHK-LTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTY 70
G+ +K H+ L I + N I K GK +A +VF +NL ++
Sbjct: 57 GDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSW 116
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
N+M+S + K+G + AR +FD M +R++VSWNTM+ GY + + EA +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 128 -DNFSWALMITCYTRKGKLEKARELLE--LVPDKLESACWN-SVIAGYAKKGQFSDAEKV 183
+ FS+A ++T + +L+ R+ LV L + + S+I YAK GQ A++
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR 243
F+ M VKD+ + ++++GY + G M A F +M EKN VSW +++G+V G + A
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 244 QLFEKI----PNPNAVSWVTMLCGFA-----RHGKITEARRLFDSMPCKNVVSWNAMIAA 294
LF K+ P ++ + LC A RHGK + ++ N + +++I
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR-PNAIVISSLIDM 355
Query: 295 YAQDLQIDEAVKLFIKLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE--- 350
Y++ ++ + ++F K D V W+T+I+ + G +A + + M +
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 351 -TALMSGLIQTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQM 404
+++ +G V+E + F ++ + I + +I ++G E + +M
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Query: 405 P-KKNSVSWNTMI 416
P + + WN ++
Sbjct: 476 PFEPDKHIWNAIL 488
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 325/643 (50%), Gaps = 59/643 (9%)
Query: 164 WNSVIAGYAKKGQFSDAEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALH-FFE 216
+NS+I GYA G ++A +F + P K + ++ G+ +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 217 KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARR 275
KM K++ N +V + G+L SAR++F+++ N VSW +M+CG+AR +A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 276 LF-----DSMPCKNVVSWNAMIAAYA--QDLQIDEAVKLFIKLP--HKDGVSWSTIINGY 326
LF D N V+ +I+A A +DL+ E V FI+ + + S +++ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL------------- 373
++ +D A+ ++++ ++ A+ S ++ G EA +FN +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 374 ---------------------------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ D IC N++I + + R D A +F +M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 407 KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
K V+WN++++GY + G++D+A F+ M E+NIVSWN++I+G +Q SL+ +A++ M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 467 -GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+EG D T + ++ YI K+G D+ + L+ M+++CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
ESA +F ++ D+ +W + I A+ G A A + F M+ + + PD V F+G L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH GL QG ++F M++ + P HY C+VDLLGR G LEEA ++ M ++ N
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL ACRV N+E+ +AA ++ L P +Y+ LSN++A AGRW ++ ++R+ M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGIS 748
+K K PG S I+++ + F S D I+ +L +S
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 208/483 (43%), Gaps = 99/483 (20%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
K+L NS++ +A+ G++ AR++FD+MS+RN+VSW +MI GY ++A LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 122 ----DVMP---------------------------------ERDNFSWALMITCYTRKGK 144
+V P E ++ + ++ Y +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 145 LEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSY----- 195
++ A+ L + C N++ + Y ++G +A VFNLM D +S
Sbjct: 287 IDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 196 ------------------------------NSMLAGYTQNGKMGLALHFFEKMAEKNVVS 225
N+++ Y + + A F++M+ K VV+
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
WN +V+G+V +G++ +A + FE +P N VSW T++ G + EA +F SM +
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 286 VSWNAM----IAAYAQDLQIDEAVKLFIKLPHKDGVSW-----STIINGYIRVGKLDEAR 336
V+ + + IA+ L + K K+G+ +T+++ + R G + A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSG 392
++N + +D++A TA + + G + A ++F+ + + D + + + G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 393 RMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSL 446
+ + ++F M K + VS + M+ +AG ++ A + + M E N V WNSL
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 447 ITG 449
+
Sbjct: 646 LAA 648
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 198/481 (41%), Gaps = 95/481 (19%)
Query: 253 NAVSWVTML----CGFARHGKITEARRLFD-SMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
N VS +T L C ++ A+ +F+ S +N++I YA +EA+ L
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 308 FIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQ 359
F+++ + D ++ ++ + +++ + KD+ + +L+ +
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT----- 414
G +D A K+F+++S R+ + W SMI G+ + +A+DLF +M + V+ N+
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 415 -----------------------------------MISGYAQAGQMDSAENIFQAMEERN 439
++ Y + +D A+ +F N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+ N++ + +++ L +AL LM G +PD+ + G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIE 559
Y+L++G+ + + NALI MY KC R ++A ++F + +++WNS+++GY NG
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 560 AFKAFKQMLSEEVV--------------------------------PDQVTFIGMLSACS 587
A++ F+ M + +V D VT + + SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 588 HAGLANQGLDLFKCM---VEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVK 641
H G LDL K + +E I+ + LVD+ R G E A FN + DV
Sbjct: 482 HLG----ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 642 A 642
A
Sbjct: 538 A 538
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 25/242 (10%)
Query: 394 MDEALDLFRQMPKK---NSVSWNT-MISGYAQAGQMDS---AENIFQAMEERNIV-SWNS 445
+DE R + K+ N VS T +++ + G +S A+ +F+ E +NS
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI G+ + L +A+ + M G PD+ TF G Q+H I+K G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
Y DLFV N+L+ YA+CG ++SA +VF + +++SW S+I GYA +A +A F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 566 QML-SEEVVPDQVTFIGMLSACS-----------HAGLANQGLDLFKCMVEDFAIEPLAE 613
+M+ EEV P+ VT + ++SAC+ +A + N G++ V D + L +
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-----VNDLMVSALVD 279
Query: 614 HY 615
Y
Sbjct: 280 MY 281
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 325/643 (50%), Gaps = 59/643 (9%)
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALH-FFE 216
+NS+I GYA G ++A +F M P K + ++ G+ +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 217 KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARR 275
KM K++ N +V + G+L SAR++F+++ N VSW +M+CG+AR +A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 276 LF-----DSMPCKNVVSWNAMIAAYA--QDLQIDEAVKLFIKLP--HKDGVSWSTIINGY 326
LF D N V+ +I+A A +DL+ E V FI+ + + S +++ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL------------- 373
++ +D A+ ++++ ++ A+ S ++ G EA +FN +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 374 ---------------------------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ D IC N++I + + R D A +F +M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 407 KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
K V+WN++++GY + G++D+A F+ M E+NIVSWN++I+G +Q SL+ +A++ M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 467 -GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+EG D T + ++ YI K+G D+ + L+ M+++CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
ESA +F ++ D+ +W + I A+ G A A + F M+ + + PD V F+G L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH GL QG ++F M++ + P HY C+VDLLGR G LEEA ++ M ++ N
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL ACRV N+E+ +AA ++ L P +Y+ LSN++A AGRW ++ ++R+ M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGIS 748
+K K PG S I+++ + F S D I+ +L +S
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 208/483 (43%), Gaps = 99/483 (20%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
K+L NS++ +A+ G++ AR++FD+MS+RN+VSW +MI GY ++A LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 122 ----DVMP---------------------------------ERDNFSWALMITCYTRKGK 144
+V P E ++ + ++ Y +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 145 LEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSY----- 195
++ A+ L + C N++ + Y ++G +A VFNLM D +S
Sbjct: 287 IDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 196 ------------------------------NSMLAGYTQNGKMGLALHFFEKMAEKNVVS 225
N+++ Y + + A F++M+ K VV+
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
WN +V+G+V +G++ +A + FE +P N VSW T++ G + EA +F SM +
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 286 VSWNAM----IAAYAQDLQIDEAVKLFIKLPHKDGVSW-----STIINGYIRVGKLDEAR 336
V+ + + IA+ L + K K+G+ +T+++ + R G + A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSG 392
++N + +D++A TA + + G + A ++F+ + + D + + + G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 393 RMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSL 446
+ + ++F M K + VS + M+ +AG ++ A + + M E N V WNSL
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 447 ITG 449
+
Sbjct: 646 LAA 648
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 198/481 (41%), Gaps = 95/481 (19%)
Query: 253 NAVSWVTML----CGFARHGKITEARRLFD-SMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
N VS +T L C ++ A+ +F+ S +N++I YA +EA+ L
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 308 FIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQ 359
F+++ + D ++ ++ + +++ + KD+ + +L+ +
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT----- 414
G +D A K+F+++S R+ + W SMI G+ + +A+DLF +M + V+ N+
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 415 -----------------------------------MISGYAQAGQMDSAENIFQAMEERN 439
++ Y + +D A+ +F N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+ N++ + +++ L +AL LM G +PD+ + G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIE 559
Y+L++G+ + + NALI MY KC R ++A ++F + +++WNS+++GY NG
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 560 AFKAFKQMLSEEVV--------------------------------PDQVTFIGMLSACS 587
A++ F+ M + +V D VT + + SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 588 HAGLANQGLDLFKCM---VEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVK 641
H G LDL K + +E I+ + LVD+ R G E A FN + DV
Sbjct: 482 HLG----ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 642 A 642
A
Sbjct: 538 A 538
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 25/242 (10%)
Query: 394 MDEALDLFRQMPKK---NSVSWNT-MISGYAQAGQMDS---AENIFQAMEERNIV-SWNS 445
+DE R + K+ N VS T +++ + G +S A+ +F+ E +NS
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI G+ + L +A+ + M G PD+ TF G Q+H I+K G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
Y DLFV N+L+ YA+CG ++SA +VF + +++SW S+I GYA +A +A F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 566 QML-SEEVVPDQVTFIGMLSACS-----------HAGLANQGLDLFKCMVEDFAIEPLAE 613
+M+ EEV P+ VT + ++SAC+ +A + N G++ V D + L +
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-----VNDLMVSALVD 279
Query: 614 HY 615
Y
Sbjct: 280 MY 281
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 332/647 (51%), Gaps = 71/647 (10%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV- 223
N+++ Y K G F KVF+ + ++ VS+NS+++ K +AL F M ++NV
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 224 ------VSWNLMVSGFVNSGDLSSARQLFE---KIPNPNAVSWVTMLCGFARHGKITEAR 274
VS S L +Q+ + N+ T++ + + GK+ ++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK----LFIKLPHKDGVSWSTIING----- 325
L S +++V+WN ++++ Q+ Q+ EA++ + ++ D + S+++
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
+R GK A + N ++ +AL+ +V ++F+ + R WN+MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 386 AGFCQSGRMDEALDLFRQMPKK-----NSVSW---------------------------- 412
AG+ Q+ EAL LF M + NS +
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 413 -------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
NT++ Y++ G++D A IF ME+R++V+WN++ITG++ + + DAL L
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 466 M-----------GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
M R KP+ T G ++H Y +K+ D+ V +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MYAKCG ++ + +VF I ++I+WN +I Y ++G EA + M+ + V P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
++VTFI + +ACSH+G+ ++GL +F M D+ +EP ++HY+C+VDLLGR GR++EA+ +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 635 VRGMDVKAN-AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGR 693
+ M N AG W SLLGA R+H NLEIGE AA L +LEP+ AS+Y+ L+N+++ AG
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 694 WEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
W++ +R M+++ K PGCSWIE +++ F++ DS + E +
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/543 (21%), Positives = 232/543 (42%), Gaps = 84/543 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
N++++++ K G ++FD++S+RN VSWN++I+ E A + F M E
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 127 RDNFSWALMITCYTRKGKLE-----KARELLELVPDKLESACWNSVIAGYAKKGQFSDAE 181
+F+ ++T + E K L +L S N+++A Y K G+ + ++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG--------- 232
+ +DLV++N++L+ QN ++ AL + +M + V +S
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
+ +G A L + N+ ++ + ++ RR+FD M + + WNAMI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVY----NQMP 343
A Y+Q+ EA+ LFI + G+ + + ++ +R G ++ +
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
+D + LM + G++D A ++F ++ RD + WN+MI G+ S ++AL L +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 404 MP---------------KKNSVSWNTMISG------------------------------ 418
M K NS++ T++
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 419 -----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
YA+ G + + +F + ++N+++WN +I + + +A+ L +M +G KP
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY----INDLFVSNALIAMYAKCGRVESA 529
++ TF G ++ Y++K Y +D + ++ + + GR++ A
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYA--CVVDLLGRAGRIKEA 673
Query: 530 EQV 532
Q+
Sbjct: 674 YQL 676
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 188/411 (45%), Gaps = 40/411 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
N N++++++ K GK++ ++ L R+LV+WNT+++ N + EA + M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 125 ---PERDNFSWALMITCYTRKGKLEKAREL--LELVPDKLE--SACWNSVIAGYAKKGQF 177
E D F+ + ++ + L +EL L L+ S ++++ Y Q
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSG 232
+VF+ M + + +N+M+AGY+QN AL F M E N + +V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 233 FVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
V SG S + ++ + + T++ ++R GKI A R+F M +++V+W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPH---------------KDGVSWSTIINGYIRVGKLD 333
N MI Y ++A+ L K+ + + ++ TI+ + L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 334 EAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
+ +E++ ++A + A+ S L+ + G + + K+F+Q+ ++ I WN +I +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 390 QSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G EA+DL R M K N V++ ++ + + +G +D IF M+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 195/468 (41%), Gaps = 109/468 (23%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+ GK A + + ++ +N ++++ ++ ++ R++FD M R + WN MIAG
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV 167
Y N +EA LF M E G L + + +VP AC
Sbjct: 379 YSQNEHDKEALLLFIGMEE--------------SAGLLANSTTMAGVVP-----AC---- 415
Query: 168 IAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+ G FS E + + +D N+++ Y++ GK+ +A+ F KM ++++
Sbjct: 416 ----VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPN---------------PNAVSWVTML--CG--- 263
V+WN M++G+V S A L K+ N PN+++ +T+L C
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 264 ------------------------------FARHGKITEARRLFDSMPCKNVVSWNAMIA 293
+A+ G + +R++FD +P KNV++WN +I
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 294 AYAQDLQIDEAVKLF----IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM------- 342
AY EA+ L ++ + V++ ++ G +DE ++ M
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD---TICWNSMIAGFCQSGRMDEALD 399
P D A + G + GR+ EA ++ N + RD W+S++ + R+ L+
Sbjct: 652 PSSDHYACVVDLLG--RAGRIKEAYQLMNMMP-RDFNKAGAWSSLLG----ASRIHNNLE 704
Query: 400 L-------FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+ Q+ + + + + Y+ AG D A + + M+E+ +
Sbjct: 705 IGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 20/265 (7%)
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
A + A +IF + + R+ W L+ ++++L +A+ + V M G KPD F
Sbjct: 45 ASAVSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
++G Q+H ++ K GY ++ + V+N L+ +Y KCG + +VF I +
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN------- 593
+SWNSLIS A +AF+ ML E V P T + +++ACS+ +
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 594 -QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
L K + F I L Y G++G+L + V+ G + W ++L
Sbjct: 224 VHAYGLRKGELNSFIINTLVAMY-------GKLGKLASS-KVLLGSFGGRDLVTWNTVLS 275
Query: 653 A-CRVHKNLEIGEF-AAMRLSELEP 675
+ C+ + LE E+ M L +EP
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEP 300
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 151/331 (45%), Gaps = 33/331 (9%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F +N + +LGK++ A+R+F ++LVT+N+MI+ + + DA L KM +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM--Q 498
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL-V 155
NL + G S+ + L ++P S L K +E+ +
Sbjct: 499 NLE--RKVSKGASRVSLKPNSITLMTILPSCAALS------------ALAKGKEIHAYAI 544
Query: 156 PDKLES--ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ L + A ++++ YAK G + KVF+ +P K+++++N ++ Y +G A+
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 214 FFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-PN----PNAVSWVTMLCGF 264
M + N V++ + + +SG + ++F + P+ P++ + ++
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 265 ARHGKITEARRLFDSMP--CKNVVSWNAMIAA--YAQDLQIDE-AVKLFIKLPHKDGVSW 319
R G+I EA +L + MP +W++++ A +L+I E A + I+L +
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
+ N Y G D+A EV M + + E
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 300 bits (767), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 315/629 (50%), Gaps = 62/629 (9%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG---LALHFFEKMAEK 221
N ++ YAK G+ + A +FN + KD+VS+NS++ GY+QNG + + F +M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 222 NVVSWNLMVSG-FVNSGDLSS------ARQLFEKIPNPNAVSWVTMLCG-FARHGKITEA 273
+++ ++G F L S A L K+ + + T L G + + G + +
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IKLPHKD----------GVSWSTI 322
++F MP +N +W+ M++ YA +++EA+K+F + L K+ V S
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
Y+ +G+ + N + +A AL++ + ++EA KMF+ R++I W+
Sbjct: 233 ATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 383 SMIAGFCQSGRMDEALDLFRQM------PKKNSV-------------------------- 410
+M+ G+ Q+G EA+ LF +M P + ++
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 411 -------SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
+ ++ YA+AG + A F ++ER++ W SLI+G++QNS +AL
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M G P+ T ++G Q+H + +K G+ ++ + +AL MY+KC
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G +E VF D++SWN++ISG + NG EA + F++ML+E + PD VTF+ ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SACSH G +G F M + ++P +HY+C+VDLL R G+L+EA + ++
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
LW LL AC+ H E+G +A +L L +S Y+ LS ++ GR +VER+
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDS 732
MR K GCSWIE++NQ F+ D+
Sbjct: 652 MRANGVSKEVGCSWIELKNQYHVFVVGDT 680
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 221/482 (45%), Gaps = 81/482 (16%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS---KLFDVMPER 127
N +++ +AK GK++ A +F+ + +++VSWN++I GY N + + +LF M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLESACW------------NSVIAGYAKKG 175
D ++ YT G + L + A S++ Y K G
Sbjct: 113 D-----ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 167
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-------EKMAEKNVVSWNL 228
D KVF MP ++ ++++M++GY G++ A+ F E+ ++ + V +
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTA 226
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKN 284
++S + + RQ+ + +V ++ +++ + EA ++FDS +N
Sbjct: 227 VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN 286
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST-----IINGYIRVGKLDEAREVY 339
++W+AM+ Y+Q+ + EAVKLF ++ G+ S ++N + L+E ++++
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLH 345
Query: 340 NQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
+ + + + A TAL+ + G + +A K F+ L RD W S+I+G+ Q+ +
Sbjct: 346 SFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNE 405
Query: 396 EALDLFRQM---------PKKNSV-----SWNTMISG----------------------- 418
EAL L+R+M P SV S T+ G
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 419 --YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y++ G ++ +F+ +++VSWN++I+G N +AL+ M EG +PD
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 477 TF 478
TF
Sbjct: 526 TF 527
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/493 (20%), Positives = 219/493 (44%), Gaps = 102/493 (20%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDAR---QLFDKMSQRNLVSWNTM 104
K GK+ +A +F+ I K++V++NS+I+ +++NG IS + QLF +M ++++
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 105 IAG---------------------------------------YLHNSMVEEASKLFDVMP 125
+AG Y +VE+ K+F MP
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA-----CWNSVIAGYAKKGQFSDA 180
ER+ ++W+ M++ Y +G++E+A ++ L + E + +V++ A
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 181 EKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS 236
++ + L+ + N+++ Y++ + A F+ ++N ++W+ MV+G+ +
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 237 GDLSSARQLFEKI------PNPNAVSWVTMLC-------------------GFARH---- 267
G+ A +LF ++ P+ + V C GF RH
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT 360
Query: 268 ----------GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH---- 313
G + +AR+ FD + ++V W ++I+ Y Q+ +EA+ L+ ++
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL----IQTGRVDEASKM 369
+ + ++++ + L+ ++V+ E + S L + G +++ + +
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQM 425
F + +D + WN+MI+G +G+ DEAL+LF +M + + V++ +IS + G +
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 426 DSAENIFQAMEER 438
+ F M ++
Sbjct: 541 ERGWFYFNMMSDQ 553
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 182/408 (44%), Gaps = 48/408 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++++++K +++A ++FD RN ++W+ M+ GY N EA KLF M F
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-----F 314
Query: 131 SWALMITCYTRKGKLEKARELLELVPDK-LES-----------ACWNSVIAGYAKKGQFS 178
S + + YT G L ++ L K L S +++ YAK G +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
DA K F+ + +D+ + S+++GY QN AL + +M ++ + ++ + +
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 239 LSSARQLFEKIPN-----------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+ +L +++ P + TM +++ G + + +F P K+VVS
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTM---YSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQM- 342
WNAMI+ + + Q DEA++LF ++ D V++ II+ G ++ +N M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 343 ------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC-WNSMIAGFCQSGRMD 395
P D A ++ L + G++ EA + + +C W +++ G+ +
Sbjct: 552 DQIGLDPKVDHYA--CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609
Query: 396 ---EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
A + + + S ++ + Y G+M E +++ M +
Sbjct: 610 LGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGV 657
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 145/308 (47%), Gaps = 20/308 (6%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
++L +++ ++AK G ++DAR+ FD + +R++ W ++I+GY+ NS EEA L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 125 PER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQF 177
++ + A ++ + LE +++ LE +++ Y+K G
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGF 233
D VF P KD+VS+N+M++G + NG+ AL FE+M E + V++ ++S
Sbjct: 475 EDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Query: 234 VNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN-VVS 287
+ G + F + +P + M+ +R G++ EA+ +S + +
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 288 WNAMIAAYAQDLQIDEAV---KLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
W +++A + + V + + L ++ ++ + Y +G++ + V+ M
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 345 KDIAAETA 352
++ E
Sbjct: 655 NGVSKEVG 662
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 145/324 (44%), Gaps = 28/324 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N + K + EA ++F ++ +N +T+++M++ +++NG+ +A +LF +M +
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 100 SWNTMIAGYLHN----SMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL 151
I G L+ +EE +L + ER F+ ++ Y + G L AR+
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 152 LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
+ + ++ + A W S+I+GY + +A ++ M ++ + +A + LA
Sbjct: 380 FDCLQER-DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS-SLA 437
Query: 212 LHFFEKMAEKNVVSWNL---------MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC 262
K + + + + + G L +F + PN + VSW M+
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497
Query: 263 GFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS 318
G + +G+ EA LF+ M + + V++ +I+A + ++ F + + G+
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557
Query: 319 -----WSTIINGYIRVGKLDEARE 337
++ +++ R G+L EA+E
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKE 581
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P ST G +H I+++G + +N L+ YAKCG++ A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAF---KAFKQMLSEEVVPDQVTFIGMLSA 585
F AI C D++SWNSLI+GY+ NG ++ + F++M +++++P+ T G+ A
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G +E+ VF T +K++V++N+MIS + NG+ +A +LF++M + V++
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 104 MIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARELLE 153
+I+ H VE F++M P+ D++ A M+ +R G+L++A+E +E
Sbjct: 530 IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY--ACMVDLLSRAGQLKEAKEFIE 584
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 207/742 (27%), Positives = 368/742 (49%), Gaps = 76/742 (10%)
Query: 60 SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASK 119
S + + V +I+++A G D+R +FD + +NL WN +I+ Y N + +E +
Sbjct: 113 STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 120 LF-------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK--LESA-CWNSVIA 169
F D++P D+F++ +I + + LV +E N++++
Sbjct: 173 TFIEMISTTDLLP--DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVS 230
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN------- 222
Y G +DA ++F++MP ++LVS+NSM+ ++ NG + +M E+N
Sbjct: 231 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 223 -----------------------VVSW-------------NLMVSGFVNSGDLSSARQLF 246
V W N ++ + G +++A+ +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 247 EKIPNPNAVSWVTMLCGFA----RHGKITEARRLF---DSMPCKNVVSWNAMIAAYAQD- 298
+ N N VSW TM+ GF+ HG R++ + + V NA+ + +
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 299 ---LQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
L+ L + + + V+ + + Y + G L A+ V++ + K + + AL+
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 356 GLIQTG--RVDEAS----KMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF--RQMPKK 407
G Q+ R+ + K+ L T+C +S R+ + + F R ++
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+ + +++S Y G++ + + +F AME++++VSWN++ITG+LQN AL M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
G + + ++G + H Y LK +D F++ +LI MYAK G +
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
+ +VF ++ SWN++I GY ++G A EA K F++M PD +TF+G+L+AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV-RGMDVKANAGL 646
H+GL ++GL M F ++P +HY+C++D+LGR G+L++A VV M +A+ G+
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
W SLL +CR+H+NLE+GE A +L ELEP NY+ LSN++A G+WE+V ++R M +
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 707 KRAGKLPGCSWIEVQNQIQCFL 728
K GCSWIE+ ++ F+
Sbjct: 830 MSLRKDAGCSWIELNRKVFSFV 851
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 209/738 (28%), Positives = 366/738 (49%), Gaps = 72/738 (9%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+NL N+++S++ K I +AR+LFD+MS R + +W MI+ + + A LF+ M
Sbjct: 56 ENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEM 115
Query: 125 ------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG-----YAK 173
P FS +++ +C + R ++ E NSV+ Y+K
Sbjct: 116 MASGTHPNEFTFS-SVVRSCAGLRDISYGGRVHGSVIKTGFEG---NSVVGSSLSDLYSK 171
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN------ 227
GQF +A ++F+ + D +S+ M++ K AL F+ +M + V
Sbjct: 172 CGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKL 231
Query: 228 LMVSGFVN--SGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
L S F+ G + + IP N V +++ +++ K+ +A R+ +S ++V
Sbjct: 232 LGASSFLGLEFGKTIHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQ 341
W ++++ + ++L+ EAV F+++ + ++S I++ V LD +++++Q
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 342 MPCKDIAAETALMSGLIQ-----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
T + + L+ + EAS++F + + + + W ++I G G + +
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 397 ALDLFRQMPKKNS---------------------------------------VSWNTMIS 417
L +M K+ V N+++
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA + ++D A N+ ++M+ R+ +++ SL+T F + + AL + M +G + DQ +
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
+ G LH Y +KSG+ V N+L+ MY+KCG +E A++VF I
Sbjct: 531 LPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA 590
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD 597
D++SWN L+SG A NG+ A AF++M +E PD VTF+ +LSACS+ L + GL+
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
Query: 598 LFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
F+ M + + IEP EHY LV +LGR GRLEEA VV M +K NA ++ +LL ACR
Sbjct: 651 YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYR 710
Query: 658 KNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW 717
NL +GE A + L P + + YI L++++ E+G+ E ++ R LM +KR K G S
Sbjct: 711 GNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKST 770
Query: 718 IEVQNQIQCFLSDDSGRL 735
+EVQ ++ F+S+D R+
Sbjct: 771 VEVQGKVHSFVSEDVTRV 788
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 9/307 (2%)
Query: 385 IAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
I FC+S L + + K +N N ++S Y + + +A +F M R +
Sbjct: 30 ILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
+W +I+ F ++ + AL M G P++ TF G ++H
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEA 560
++K+G+ + V ++L +Y+KCG+ + A ++F++++ D ISW +IS EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVD 620
+ + +M+ V P++ TF+ +L A S GL +V + + + + LVD
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLK--TSLVD 267
Query: 621 LLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSELEPHNA 678
+ ++E+A V+ + + LW S++ G R + E +G F MR L+P+N
Sbjct: 268 FYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 679 SNYITLS 685
+ LS
Sbjct: 327 TYSAILS 333
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 172/436 (39%), Gaps = 105/436 (24%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL--------- 98
+ K+E+AVRV +++ +++ + S++S F +N + +A F +M L
Sbjct: 271 QFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 99 ----------------VSWNTMIAGY-----LHNSMVE----------EASKLFDVMPER 127
+ T+ G+ + N++V+ EAS++F M
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP 390
Query: 128 DNFSWALMITCYTRKG--------------------------------KLEKARELLELV 155
+ SW +I G KL R +LE+
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIH 450
Query: 156 PDKL------ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
L E NS++ YA + A V M +D ++Y S++ + + GK
Sbjct: 451 AYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHE 510
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFV----NSGDLSSARQLF---EKIPNPNAVSWVTMLC 262
+AL M + L + GF+ N G L + + L K A S + L
Sbjct: 511 MALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLV 570
Query: 263 G-FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGV 317
+++ G + +A+++F+ + +VVSWN +++ A + I A+ F +K D V
Sbjct: 571 DMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSV 630
Query: 318 SWSTIINGYIRVGKLDE--------AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKM 369
++ +++ G+L + +++YN P + L+ L + GR++EA+ +
Sbjct: 631 TFLILLSA-CSNGRLTDLGLEYFQVMKKIYNIEP--QVEHYVHLVGILGRAGRLEEATGV 687
Query: 370 FNQLSTRDTICWNSMI 385
+ + N+MI
Sbjct: 688 VETMHLKP----NAMI 699
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 255/429 (59%), Gaps = 4/429 (0%)
Query: 320 STIINGYIRVGKLD--EAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+ +I+ Y R G L +A +++ +M +D + +++ GL++ G + +A ++F+++ RD
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME- 436
I WN+M+ G+ + M +A +LF +MP++N+VSW+TM+ GY++AG M+ A +F M
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 437 -ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN 495
+N+V+W +I G+ + L +A + + M G K D + +G
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
++H + +S ++ +V NAL+ MYAKCG ++ A VF I DL+SWN+++ G ++G
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
+ EA + F +M E + PD+VTFI +L +C+HAGL ++G+D F M + + + P EHY
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHY 455
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP 675
CLVDLLGR+GRL+EA VV+ M ++ N +WG+LLGACR+H ++I + L +L+P
Sbjct: 456 GCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDP 515
Query: 676 HNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRL 735
+ NY LSN++A A WE V +R M+ K G S +E+++ I F D
Sbjct: 516 CDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHP 575
Query: 736 RPETIQIIL 744
+ + I +L
Sbjct: 576 KSDQIYQML 584
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 211/423 (49%), Gaps = 31/423 (7%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
AVRVF+ N+ NS+I A+N + A +F +M + L + N L
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 115 EEASKLFDVMPER--------DNFSWALMITCYTRKGKL--EKARELLELVPDKLESACW 164
+ + +M D + +I CY+R G L A +L E + ++ ++ W
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSW 188
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
NS++ G K G+ DA ++F+ MP +DL+S+N+ML GY + +M A FEKM E+N V
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNP--NAVSWVTMLCGFARHGKITEARRLFDSMPC 282
SW+ MV G+ +GD+ AR +F+K+P P N V+W ++ G+A G + EA RL D M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIING----YIRVGKLDE 334
+ + +++AA + + +++ L + S + ++N Y + G L +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
A +V+N +P KD+ + ++ GL G EA ++F+++ D + + +++
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 391 SGRMDEALDLFRQMPKKNSV-----SWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWN 444
+G +DE +D F M K + + ++ + G++ A + Q M E N+V W
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 445 SLI 447
+L+
Sbjct: 489 ALL 491
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 183/353 (51%), Gaps = 24/353 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
G LG V +A+++F ++ V++NSM+ K G++ DAR+LFD+M QR+L+SWNTM+
Sbjct: 166 GGLG-VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC-WN 165
GY + +A +LF+ MPER+ SW+ M+ Y++ G +E AR + + +P ++ W
Sbjct: 225 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
+IAGYA+KG +A+++ + M D + S+LA T++G + L + +
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 222 NVVS----WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF 277
N+ S N ++ + G+L A +F IP + VSW TML G HG EA LF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 278 DSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKL-------PHKDGVSWSTIINGY 326
M + + V++ A++ + IDE + F + P + + +++
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVE--HYGCLVDLL 462
Query: 327 IRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTRDT 378
RVG+L EA +V MP + ++ AL+ VD A ++ + L D
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDP 515
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 226/464 (48%), Gaps = 73/464 (15%)
Query: 31 IGGKHVFNKN-QQIIHLGKLGKVEEA-VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQ 88
+ + +F + Q + L +V++ ++ +H++L +IS + + + A +
Sbjct: 13 VSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVR 72
Query: 89 LFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGK 144
+F+++ + N+ N++I + NS +A +F M DNF++ ++ + +
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 145 LEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
L +++++ + +E +S D+ N+++ Y++
Sbjct: 133 LP----VVKMMHNHIEKLGLSS------------------------DIYVPNALIDCYSR 164
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
G +G+ A +LFEK+ + VSW +ML G
Sbjct: 165 CGGLGV-----------------------------RDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
+ G++ +ARRLFD MP ++++SWN M+ YA+ ++ +A +LF K+P ++ VSWST++
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVM 255
Query: 325 GYIRVGKLDEAREVYNQM--PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DT 378
GY + G ++ AR ++++M P K++ T +++G + G + EA ++ +Q+ D
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQA 434
S++A +SG + + + + + N+ N ++ YA+ G + A ++F
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ ++++VSWN+++ G + +A++ M REG +PD+ TF
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N + L K G++ +A R+F ++L+++N+M+ +A+ ++S A +LF+KM +RN V
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVM--PERDNFSWALMITCYTRKGKLEKARELL-ELVP 156
SW+TM+ GY +E A +FD M P ++ +W ++I Y KG L++A L+ ++V
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 157 D--KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGL 210
K ++A S++A + G S ++ +++ +L S N++L Y + G +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR 266
A F + +K++VSWN M+ G G A +LF ++ P+ V+++ +LC
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 267 HGKITEARRLFDSMP-----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-WS 320
G I E F SM V + ++ + ++ EA+K+ +P + V W
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 321 TIINGYIRVGKLDEAREVYNQM----PC 344
++ ++D A+EV + + PC
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPC 516
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+IS + Q + A +F ++E N+ NSLI QNS + A M R G D
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG--RVESAEQV 532
T+ V +H +I K G +D++V NALI Y++CG V A ++
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + D +SWNS++ G G +A + F +M D +++ ML +
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREM 232
Query: 593 NQGLDLFKCMVE 604
++ +LF+ M E
Sbjct: 233 SKAFELFEKMPE 244
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
QLH I++ DL ++ LI+ + C + A +VF ++ ++ NSLI +A N
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM---VEDFAIEPLA 612
+AF F +M + D T+ +L ACS L + K M +E +
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACS----GQSWLPVVKMMHNHIEKLGLSSDI 152
Query: 613 EHYSCLVDLLGRMGRL--EEAFNVVRGMDVKANAGLWGSLLGA 653
+ L+D R G L +A + M + W S+LG
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGG 194
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H + S G + + N + K G +++A VF++ K+LV++N+M+ +G
Sbjct: 338 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHG 397
Query: 84 SDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEA-------SKLFDVMPERDNFSW 132
+A +LF +M + + V++ ++ H +++E K++D++P+ +++
Sbjct: 398 KEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHY-- 455
Query: 133 ALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN 185
++ R G+L++A ++++ +P + W +++ + A++V +
Sbjct: 456 GCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 298 bits (764), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 307/573 (53%), Gaps = 26/573 (4%)
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
KL+SA +N ++ GY + + DA K+F++MP + VSY +++ GY QN + A+ F +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 218 MAEK----NVVSWNLMVSGFVNSGDLSSARQLFE-----KIPNPNAVSWVTMLCGFARHG 268
M N V+ ++S + G + R L K+ VS +L +
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVS-TNLLHMYCLCL 222
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIR 328
+ +AR+LFD MP +N+V+WN M+ Y++ I++A +LF ++ KD VSW T+I+G +R
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLR 282
Query: 329 VGKLDEAREVYNQM-PCKDIAAETALMSGLIQTGRVDEASK---MFNQLSTRDTICWN-- 382
+LDEA Y +M C +E ++ L + R +SK + + R C++
Sbjct: 283 KNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFL 342
Query: 383 --SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
++I + S + AL F K + S N +I+G+ + G ++ A +F +++I
Sbjct: 343 QATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI 402
Query: 441 VSWNSLITGFLQN---SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
SWN++I+G+ Q+ L + ++ KPD T + G +
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMI--SSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA---IECVDLISWNSLISGYALN 554
H+Y+ S + ++ A+I MYAKCG +E+A +F I + WN++I G A +
Sbjct: 461 HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G+A A + + S + P+ +TF+G+LSAC HAGL G F+ M D IEP +H
Sbjct: 521 GHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKH 580
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELE 674
Y C+VDLLG+ GRLEEA +++ M VKA+ +WG LL A R H N+EI E AA L+ ++
Sbjct: 581 YGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAID 640
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
P + + LSN++A+AGRWE+V +R MR +
Sbjct: 641 PSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 259/568 (45%), Gaps = 78/568 (13%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
RV + + N NS+++++AK ++DA +F ++ + S+N M+ GY+ + + +
Sbjct: 66 RVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWD 125
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAK 173
A KLFDVMPER S+ +I Y + + +A EL + + L +VI+ +
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 174 KGQFSDAEKVFNL-----MPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
G D + +L + + VS N +L Y + A F++M E+N+V+WN+
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTN-LLHMYCLCLCLKDARKLFDEMPERNLVTWNV 244
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-PC---KN 284
M++G+ +G + A +LF++I + VSW TM+ G R ++ EA + M C +
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW----STIINGYIRVGKLDEAREVYN 340
V +++A A+ + + ++L + + + +TII+ Y + A + +
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 341 QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
IA+ AL++G ++ G V++A ++F+Q +D WN+MI+G+ QS AL L
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 401 FRQMPKKNSVSWN--TMIS--------------------------------------GYA 420
FR+M + V + TM+S YA
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 421 QAGQMDSAENIFQA---MEERNIVSWNSLITGF-------LQNSLYFDALKSLVLMGREG 470
+ G +++A NIF + I WN++I G L LY D L+SL +
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD-LQSLPI----- 538
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS--GYINDLFVSNALIAMYAKCGRVES 528
KP+ TF ++G E +KS G D+ ++ + K GR+E
Sbjct: 539 -KPNSITFVGVLSACCHAGLVELGKTYFES-MKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 529 AEQVFTAIEC-VDLISWNSLISGYALNG 555
A+++ + D++ W L+S +G
Sbjct: 597 AKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 194/406 (47%), Gaps = 33/406 (8%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
+++A ++F +NLVT+N M++ ++K G I A +LFD+++++++VSW TMI G L
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 112 SMVEEASKLFDVMPERD-NFSWALMITCYTRKGKLEKARELLELVPDKLESA--CWN--- 165
+ ++EA + M S +M+ + + + + L+L ++ C++
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 166 -SVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
++I YA A + F + S N+++AG+ +NG + A F++ +K++
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDS 279
SWN M+SG+ S A LF ++ + P+A++ V++ + G + E +R D
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 280 M------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS---WSTIINGYIRVG 330
+ P N+ + A+I YA+ I+ A+ +F + + + W+ II G G
Sbjct: 464 LNFSTIPPNDNLTA--AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 521
Query: 331 KLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLST-----RDTICW 381
A ++Y+ + I + ++S G V+ F + + D +
Sbjct: 522 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMD 426
M+ ++GR++EA ++ ++MP K V W ++S G ++
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 40/295 (13%)
Query: 349 AETALMSGL--------IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
E AL+S L + GR + + L + IC NS++ + + + +A +
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYIC-NSVLNMYAKCRLLADAESV 98
Query: 401 FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
FR K +S S+N M+ GY ++ ++ A +F M ER+ VS+ +LI G+ QN+ + +A+
Sbjct: 99 FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
+ M G ++ T L +K +FVS L+ MY
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 521 AKC-------------------------------GRVESAEQVFTAIECVDLISWNSLIS 549
C G +E AE++F I D++SW ++I
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
G EA + +ML + P +V + +LSA + + +++GL L +V+
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
H+ ++N I K G VE+A VF T K++ ++N+MIS +A++ A LF +M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 95 QRNLVSWN--TMIAGYLHNS---MVEEASKL-----FDVMPERDNFSWALMITCYTRKGK 144
+ V + TM++ + S +EE + F +P DN + A +I Y + G
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT-AAIIDMYAKCGS 488
Query: 145 LEKARELLELVPDKLESAC--WNSVIAGYAKKGQFSDAEKVFN---LMPVK-DLVSYNSM 198
+E A + + S WN++I G A G A +++ +P+K + +++ +
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 199 LAGYTQNGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NP 252
L+ G + L +FE M E ++ + MV +G L A+++ +K+P
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 253 NAVSWVTMLCGFARHGKI 270
+ + W +L HG +
Sbjct: 609 DVMIWGMLLSASRTHGNV 626
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 207/742 (27%), Positives = 366/742 (49%), Gaps = 53/742 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQL---FDK 92
++Q +L + G + EA + + + TY ++ +G I R L F
Sbjct: 50 DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGL 109
Query: 93 MSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL 152
++ ++ +++ Y + +A K+FD M ER+ F+W+ MI Y+R+ + + +L
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 153 EL------VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY-----NSMLAG 201
L +PD + ++ G A G +A KV + + +K +S NS+LA
Sbjct: 170 RLMMKDGVLPDDF---LFPKILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSW 257
Y + G++ A FF +M E++V++WN ++ + +G A +L +++ +P V+W
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 258 VTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKL-- 311
++ G+ + GK A L M +V +W AMI+ + +A+ +F K+
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 312 --PHKDGVSWSTIINGYIRVGKLDEAREVYN---QMP-CKDIAAETALMSGLIQTGRVDE 365
+ V+ + ++ + +++ EV++ +M D+ +L+ + G++++
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQ 421
A K+F+ + +D WNSMI G+CQ+G +A +LF +M + N ++WNTMISGY +
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 422 AGQMDSAENIFQAME-----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
G A ++FQ ME +RN +WN +I G++QN +AL+ M P+
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T ++ ++H +L+ V NAL YAK G +E + +F +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
E D+I+WNSLI GY L+G A F QM ++ + P++ T ++ A G ++G
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+F + D+ I P EH S +V L GR RLEEA ++ M++++ +W S L CR+
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMH---AEAGRWEEVERLRVLMRDKRAGKLP 713
H ++++ AA L LEP N + +S ++ A+ GR E + R RD K
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPL 762
Query: 714 GCSWIEVQNQIQCFLSDDSGRL 735
G SWIEV+N I F + D +L
Sbjct: 763 GQSWIEVRNLIHTFTTGDQSKL 784
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 147/637 (23%), Positives = 276/637 (43%), Gaps = 129/637 (20%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
VF + + + K G + +A +VF + +NL T+++MI +++ + + +LF M +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
V+P D+F + ++ G +E + + +V
Sbjct: 175 DG-------------------------VLP--DDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 156 PDKLESACW---NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
S+C NS++A YAK G+ A K F M +D++++NS+L Y QNGK A+
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 213 HFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
++M ++ + V+WN+++ G+ G +A L +K+ + +W M+ G
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 265 ARHGKITEARRLFDSM-------------------PCKNVVSW----------------- 288
+G +A +F M C V++
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 289 ---NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP-- 343
N+++ Y++ ++++A K+F + +KD +W+++I GY + G +A E++ +M
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 344 --CKDIAAETALMSGLIQTGRVDEASKMFNQLST-----RDTICWNSMIAGFCQSGRMDE 396
+I ++SG I+ G EA +F ++ R+T WN +IAG+ Q+G+ DE
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 397 ALDLFRQMP----KKNSVSW-----------------------------------NTMIS 417
AL+LFR+M NSV+ N +
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA++G ++ + IF ME ++I++WNSLI G++ + Y AL M +G P++ T
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGY--INDLFVSNALIAMYAKCGRVESAEQVFTA 535
G ++ Y + + Y I L +A++ +Y + R+E A Q
Sbjct: 628 LSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE 686
Query: 536 IEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEE 571
+ + W S ++G ++G A A + + S E
Sbjct: 687 MNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLE 723
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 296/584 (50%), Gaps = 64/584 (10%)
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
GK AL+ +A +S N V+ + G LS AR F PN S+ ++ +
Sbjct: 26 TGKSLHALYVKSIVASSTYLS-NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWS 320
A+ KI AR+LFD +P + VS+N +I+ YA + A+ LF ++ DG + S
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAA--------ETALMSGLIQTGRVDEASKMFNQ 372
+I + ++ Q+ C ++ A ++ + G + EA +F
Sbjct: 145 GLIAACC------DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 373 LST-RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK------------------------ 407
+ RD + WNSMI + Q +AL L+++M K
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 408 ---------------NSVSWNTMISGYAQAGQMDS---AENIFQAMEERNIVSWNSLITG 449
NS + +I Y++ G D +E +FQ + ++V WN++I+G
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 450 FLQNS-LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI- 507
+ N L +A+KS M R G +PD +F Q+H +KS
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM 567
N + V+NALI++Y K G ++ A VF + ++ +S+N +I GYA +G+ EA +++M
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 568 LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGR 627
L + P+++TF+ +LSAC+H G ++G + F M E F IEP AEHYSC++DLLGR G+
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 628 LEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNM 687
LEEA + M K + W +LLGACR HKN+ + E AA L ++P A+ Y+ L+NM
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANM 558
Query: 688 HAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
+A+A +WEE+ +R MR KR K PGCSWIEV+ + F+++D
Sbjct: 559 YADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 216/445 (48%), Gaps = 31/445 (6%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L + SI + N + K G++ A F +T N+ +YN ++ +AK+ KI
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCY 139
ARQLFD++ Q + VS+NT+I+GY A LF M E D F+ + +I
Sbjct: 91 HIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC 150
Query: 140 TRKGKLEKARELLELVPD-KLESACWNSVIAGYAKKGQFSDAEKVFNLM-PVKDLVSYNS 197
+ L K + S+ N+ + Y+K G +A VF M ++D VS+NS
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 198 MLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP--- 250
M+ Y Q+ + AL +++M K ++ + +++ + L RQ K+
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 251 -NPNAVSWVTMLCGFARHG---KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI-DEAV 305
+ N+ ++ +++ G + ++ ++F + ++V WN MI+ Y+ + ++ +EAV
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAV 330
Query: 306 KLFI---KLPHK-DGVSWSTIINGYIRVGKLDEAREVY-----NQMPCKDIAAETALMSG 356
K F ++ H+ D S+ + + + + ++++ + +P I+ AL+S
Sbjct: 331 KSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISL 390
Query: 357 LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSW 412
++G + +A +F+++ + + +N MI G+ Q G EAL L+++M N +++
Sbjct: 391 YYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
Query: 413 NTMISGYAQAGQMDSAENIFQAMEE 437
++S A G++D + F M+E
Sbjct: 451 VAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 49/178 (27%)
Query: 60 SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL---------- 109
SN I N N++IS++ K+G + DAR +FD+M + N VS+N MI GY
Sbjct: 378 SNRISVN----NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 110 -------------------------HNSMVEEASKLFDVM-------PERDNFSWALMIT 137
H V+E + F+ M PE +++S MI
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS--CMID 491
Query: 138 CYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN-LMPVKDLVS 194
R GKLE+A ++ +P K S W +++ K + AE+ N LM ++ L +
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 295 bits (756), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 200/691 (28%), Positives = 331/691 (47%), Gaps = 120/691 (17%)
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSY--NSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+I+ Y G S A + P D Y NS++ Y NG L+ F M + +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSL 121
Query: 225 SWN----LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT-----------MLCGFARHGK 269
SW F G++SS R + +A+S VT ++ ++R
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCG----ESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI------- 322
+++AR++FD M +VVSWN++I +YA+ + A+++F ++ ++ G I
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 323 ---------------------------------INGYIRVGKLDEAREVYNQMPCKDIAA 349
++ Y + G +DEA V++ M KD+ +
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQM- 404
A+++G Q GR ++A ++F ++ D + W++ I+G+ Q G EAL + RQM
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 405 ---PKKNSVSWNTMISG------------------------------------------Y 419
K N V+ +++SG Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 420 AQAGQMDSAENIFQAM--EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG--KKPDQ 475
A+ ++D+A +F ++ +ER++V+W +I G+ Q+ AL+ L M E +P+
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYAKCGRVESAEQVFT 534
T ++G Q+H Y L++ LFVSN LI MYAKCG + A VF
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ + ++W SL++GY ++GY EA F +M D VT + +L ACSH+G+ +Q
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
G++ F M F + P EHY+CLVDLLGR GRL A ++ M ++ +W + L C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
R+H +E+GE+AA +++EL ++ +Y LSN++A AGRW++V R+R LMR K K PG
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 715 CSWIE-VQNQIQCFLSDDSGRLRPETIQIIL 744
CSW+E ++ F+ D + E Q++L
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 748
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 213/470 (45%), Gaps = 46/470 (9%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
GE ++ H L++ + +VF N + + + +A +VF ++V++N
Sbjct: 138 GEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWN 197
Query: 72 SMISVFAKNGKISDARQLFDKMSQR------NLVSWNTM-IAGYLHNSMVEEASKLFDVM 124
S+I +AK GK A ++F +M+ N+ N + L + + F V
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 125 PE--RDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
E ++ F ++ Y + G +++A + + K + WN+++AGY++ G+F DA +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVR 316
Query: 183 VFNLMPVK----DLVSYNSMLAGYTQNG----KMGLALHFFEKMAEKNVVSWNLMVSGFV 234
+F M + D+V++++ ++GY Q G +G+ + N V+ ++SG
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 235 NSGDLSSARQLFE---KIP---NPNAVSWVTMLCG-----FARHGKITEARRLFDSMPCK 283
+ G L +++ K P N M+ +A+ K+ AR +FDS+ K
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 284 --NVVSWNAMIAAYAQDLQIDEAVKLFIKL--------PHKDGVSWSTIIN---GYIRVG 330
+VV+W MI Y+Q ++A++L ++ P+ +S + + +R+G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
K A + NQ + L+ + G + +A +F+ + ++ + W S++ G+
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 391 SGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G +EAL +F +M K + V+ ++ + +G +D F M+
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP- 125
L N +I ++AK G ISDAR +FD M +N V+W +++ GY + EEA +FD M
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 126 ---ERDNFSWALMITCYTRKGKLEKARE-------LLELVPDKLESACWNSVIAGYAKKG 175
+ D + +++ + G +++ E + + P AC ++ + G
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL---GRAG 629
Query: 176 QFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKMAE---KNVVSWNLMVS 231
+ + A ++ MP++ V + + L+ +GK+ L + EK+ E + S+ L+ +
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 232 GFVNSG---DLSSARQLFEK--IPNPNAVSWV 258
+ N+G D++ R L + SWV
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 190/623 (30%), Positives = 322/623 (51%), Gaps = 57/623 (9%)
Query: 166 SVIAGYAKKGQFSDAEKVF---NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
++I+ YA+ G DA VF +L+ + DL +NS+L +G AL + M ++
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 223 VVSWNLMVSGFVNS----GDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITE 272
+ ++ + + G R ++ N + V+ +L + + G++ +
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVN--ELLTLYPKAGRMGD 211
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIR 328
A LF MP +N +SWN MI ++Q+ + AVK+F + + D V+W+++++ + +
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 329 VGKLDEAREVYNQMPCK-------------DIAAETALMS------GLIQTGRVDEASKM 369
GK ++ + ++ M + AE +S G + G +E
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE---- 327
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAE 429
L +R N++I + + G++ +A LFRQ+ K SWN++I+ + AG++D A
Sbjct: 328 --YLPSR-----NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEAL 380
Query: 430 NIFQAMEE--------RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
++F +EE N+V+W S+I G D+L+ M + T
Sbjct: 381 SLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCI 440
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+G ++H +++++ ++ V NAL+ MYAKCG + VF AI DL
Sbjct: 441 LSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
ISWNS+I GY ++G+A +A F +M+S PD + + +LSACSHAGL +G ++F
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYS 560
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
M + F +EP EHY+C+VDLLGR+G L+EA +V+ M ++ + G+LL +CR+HKN++
Sbjct: 561 MSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVD 620
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
I E A +LS LEP +Y+ LSN+++ GRWEE +R L + K K+ G SWIEV+
Sbjct: 621 IAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVK 680
Query: 722 NQIQCFLSDDSGRLRPETIQIIL 744
+ F S + ETI +L
Sbjct: 681 KKKYKFSSGSIVQSEFETIYPVL 703
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 192/429 (44%), Gaps = 69/429 (16%)
Query: 45 HLGKLGKVEE-AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+LG+ G +V + +NL N +++++ K G++ DA LF +M RN +SWN
Sbjct: 170 YLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNV 229
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLEL----- 154
MI G+ E A K+F+ M D +W +++C+++ GK E + L
Sbjct: 230 MIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
Query: 155 -------------VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
V +LE+ + GY KG F + L S N+++
Sbjct: 290 NAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY-----------LPSRNALIHV 338
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
Y + GK+ A H F ++ K + SWN +++ FV++G L A LF ++ N V V
Sbjct: 339 YGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVK-- 396
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGV 317
NVV+W ++I + D++++ F ++ + V
Sbjct: 397 ---------------------ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQL 373
+ I++ + L+ RE++ + ++I + AL++ + G + E S +F +
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAE 429
+D I WNS+I G+ G ++AL +F +M + ++ ++S + AG ++
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 430 NIFQAMEER 438
IF +M +R
Sbjct: 556 EIFYSMSKR 564
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 204/473 (43%), Gaps = 102/473 (21%)
Query: 72 SMISVFAKNGKISDARQLFDKMS---QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER- 127
++ISV+A+ G + DAR +F+ +S +L WN+++ + + + E A +L+ M +R
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAE 181
D + L++ G+ R V K N ++ Y K G+ DA
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+F MPV++ +S+N M+ G++Q A+ FE M
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM----------------------- 250
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAM-----IAAY 295
R+ F+ P+ V+W ++L ++ GK + + F M N VS A+ + A
Sbjct: 251 QREEFK----PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE 306
Query: 296 AQDLQIDEAVKLFI-------KLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ L I E V ++ LP ++ +I+ Y + GK+ +A ++ Q+ K I
Sbjct: 307 LEALSIAEKVHGYVIKGGFEEYLPSRNA-----LIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTIC--------WNSMIAGFCQSGRMDEALDL 400
+ +L++ + G++DEA +F++L + +C W S+I G GR D++L+
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 401 FRQMP---------------------------------------KKNSVSWNTMISGYAQ 421
FRQM +N + N +++ YA+
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
G + +F+A+ +++++SWNS+I G+ + AL M G PD
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPD 534
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 149/350 (42%), Gaps = 70/350 (20%)
Query: 43 IIHL-GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ------ 95
+IH+ GK GKV++A +F +K + ++NS+I+ F GK+ +A LF ++ +
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 96 --RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCY----TRKGKLEKAR 149
N+V+W ++I G +++ + F M + ++ I C L R
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGR 454
Query: 150 ELLELVPDKLESA---CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG 206
E+ V S N+++ YAK G S+ VF + KDL+S+NS++ GY +G
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
AL F++M + SGF +P+ ++ V +L +
Sbjct: 515 FAEKALSMFDRM----------ISSGF-----------------HPDGIALVAVLSACSH 547
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGY 326
G + + R +F SM K F P ++ ++ I++
Sbjct: 548 AGLVEKGREIFYSMS------------------------KRFGLEPQQE--HYACIVDLL 581
Query: 327 IRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLST 375
RVG L EA E+ MP + + AL++ VD A + +QLS
Sbjct: 582 GRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 295 bits (755), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 327/632 (51%), Gaps = 59/632 (9%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----E 220
S++ Y + G SDAEKVF+ MPV+DLV+++++++ +NG++ AL F+ M E
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 221 KNVVSWNLMVSGFVNSGDLSSAR----QLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+ V+ +V G G L AR Q+ K+ + + ++L +++ G + + R+
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI----------INGY 326
F+ + KN VSW AMI++Y + ++A++ F ++ K G+ + + + G
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI-KSGIEPNLVTLYSVLSSCGLIGL 318
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
IR GK V ++ + AL+ + G++ + + +S R+ + WNS+I+
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 387 GFCQSGRMDEALDLFRQMPKK----------NSVS------------------------- 411
+ G + +AL LFRQM + +S+S
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 412 ---WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
N++I Y+++G +DSA +F ++ R++V+WNS++ GF QN +A+ M
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
+ ++ TF + G +H ++ SG + DLF ALI MYAKCG + +
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNA 557
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
AE VF A+ ++SW+S+I+ Y ++G A F QM+ P++V F+ +LSAC H
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
+G +G F M + F + P +EH++C +DLL R G L+EA+ ++ M A+A +WG
Sbjct: 618 SGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWG 676
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
SL+ CR+H+ ++I + LS++ + Y LSN++AE G WEE RLR M+
Sbjct: 677 SLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSN 736
Query: 709 AGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
K+PG S IE+ ++ F + + R++ + I
Sbjct: 737 LKKVPGYSAIEIDQKVFRFGAGEENRIQTDEI 768
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 146/604 (24%), Positives = 276/604 (45%), Gaps = 70/604 (11%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
HL GKV R+ + + V S++ ++ + G +SDA ++FD M R+LV+W+T+
Sbjct: 116 HLSVGGKVHG--RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTL 173
Query: 105 IAGYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVPDKL- 159
++ L N V +A ++F M E D + ++ G L AR + + K+
Sbjct: 174 VSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF 233
Query: 160 ---ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
E+ C NS++ Y+K G +E++F + K+ VS+ +M++ Y + AL F
Sbjct: 234 DLDETLC-NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 217 KM----AEKNVVSWNLMVS-----GFVNSGDLSSARQLFEKI-PNPNAVSWVTMLCGFAR 266
+M E N+V+ ++S G + G + ++ PN ++S + ++ +A
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS-LALVELYAE 351
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTI 322
GK+++ + + +N+V+WN++I+ YA + +A+ LF ++ + D + ++
Sbjct: 352 CGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAE---TALMSGLIQTGRVDEASKMFNQLSTRDTI 379
I+ G + ++++ + D++ E +L+ ++G VD AS +FNQ+ R +
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV 471
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQM-------------------------PKKNSVSWNT 414
WNSM+ GF Q+G EA+ LF M K V
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531
Query: 415 MISG-------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
+ISG YA+ G +++AE +F+AM R+IVSW+S+I + + A+
Sbjct: 532 IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAIS 591
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
+ M G KP++ F + G + G + I + +
Sbjct: 592 TFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLS 651
Query: 522 KCGRVESAEQVFTAIE-CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
+ G ++ A + + D W SL++G ++ ++ KA K LS ++V D +
Sbjct: 652 RSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH-QKMDIIKAIKNDLS-DIVTDDTGYY 709
Query: 581 GMLS 584
+LS
Sbjct: 710 TLLS 713
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 175/380 (46%), Gaps = 26/380 (6%)
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
+D + + +I Y +G D +R V+ P D L+ + +D A ++++L
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 374 STRDT----ICWNSMIAGFCQSGRMDEALD------LFRQMPKKNSVSWNTMISGYAQAG 423
+ T + S++ C R ++ + + ++V +++ Y Q G
Sbjct: 92 VSETTQISKFVFPSVLRA-CAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ AE +F M R++V+W++L++ L+N AL+ M +G +PD T
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
++ +H I + + D + N+L+ MY+KCG + S+E++F I + +S
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
W ++IS Y ++ +A ++F +M+ + P+ VT +LS+C GL +G V
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS-----V 325
Query: 604 EDFAI----EPLAEHYS-CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
FA+ +P E S LV+L G+L + V+R + + N W SL+ + H+
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR-NIVAWNSLI-SLYAHR 383
Query: 659 NLEI---GEFAAMRLSELEP 675
+ I G F M ++P
Sbjct: 384 GMVIQALGLFRQMVTQRIKP 403
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 188/421 (44%), Gaps = 53/421 (12%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
N + K G + + R+F KN V++ +MIS + + A + F +M +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 97 -NLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKAR 149
NLV+ ++++ ++ E + ++ P ++ S AL + Y GKL
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL-VELYAECGKLSDCE 359
Query: 150 ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
+L +V D+ WNS+I+ YA +G A +F M + D + S ++
Sbjct: 360 TVLRVVSDR-NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 206 GKMGLALHFFEKMAEKNVVS---WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC 262
G + L + +V N ++ + SG + SA +F +I + + V+W +MLC
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI 322
GF+++G EA LFD M Y L+++E V++ +
Sbjct: 479 GFSQNGNSVEAISLFDYM--------------YHSYLEMNE-------------VTFLAV 511
Query: 323 INGYIRVGKLDEAREVYNQM---PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
I +G L++ + V++++ KD+ +TAL+ + G ++ A +F +S+R +
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
W+SMI + GR+ A+ F QM K N V + ++S +G ++ + F M
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 436 E 436
+
Sbjct: 632 K 632
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 147/295 (49%), Gaps = 18/295 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
NS+I +++K+G + A +F+++ R++V+WN+M+ G+ N EA LFD M E
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 127 RDNFSWALMITCYTRKGKLEKAREL-LELVPDKLESACWNS-VIAGYAKKGQFSDAEKVF 184
+ ++ +I + G LEK + + +L+ L+ ++ +I YAK G + AE VF
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVF 562
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLS 240
M + +VS++SM+ Y +G++G A+ F +M E N V + ++S +SG +
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 241 SARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMP-CKNVVSWNAMI--A 293
+ F + +PN+ + + +R G + EA R MP + W +++
Sbjct: 623 EGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTII-NGYIRVGKLDEAREVYNQMPCKDI 347
Q + I +A+K + D + T++ N Y G+ +E R + + M ++
Sbjct: 683 RIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 261/481 (54%), Gaps = 40/481 (8%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DGVSWSTIINGYI 327
A RLF+ + NV +N++I AY + + ++++ +L K D ++ +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 328 RVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+G ++V+ + P + E AL+ ++ + +A K+F+++ RD
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV----- 175
Query: 384 MIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSW 443
+SWN+++SGYA+ GQM A+ +F M ++ IVSW
Sbjct: 176 --------------------------ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSW 209
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
++I+G+ Y +A+ M G +PD+ + ++G +H Y +
Sbjct: 210 TAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAER 269
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
G++ V NALI MY+KCG + A Q+F +E D+ISW+++ISGYA +G A A +
Sbjct: 270 RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIET 329
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
F +M +V P+ +TF+G+LSACSH G+ +GL F M +D+ IEP EHY CL+D+L
Sbjct: 330 FNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLA 389
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
R G+LE A + + M +K ++ +WGSLL +CR NL++ A L ELEP + NY+
Sbjct: 390 RAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVL 449
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQII 743
L+N++A+ G+WE+V RLR ++R++ K PG S IEV N +Q F+S D+ + I I+
Sbjct: 450 LANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIV 509
Query: 744 L 744
L
Sbjct: 510 L 510
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 51/387 (13%)
Query: 82 KISD---ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNF- 130
KI D A +LF+++S N+ +N++I Y HNS+ + +++ + P+R F
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 131 ----SWALMITCYTRK---GKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
S A + +CY K G L K +V + N++I Y K DA KV
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE-------NALIDMYMKFDDLVDAHKV 166
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR 243
F+ M +D++S+NS+L+GY + G+M A F M +K +VSW M+SG+ G A
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 244 QLFEKIP----NPNAVSWVTMLCGFARHGKIT--------EARRLFDSMPCKNVVSWNAM 291
F ++ P+ +S +++L A+ G + RR F K NA+
Sbjct: 227 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF----LKQTGVCNAL 282
Query: 292 IAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET 351
I Y++ I +A++LF ++ KD +SWST+I+GY G A E +N+M +
Sbjct: 283 IEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNG 342
Query: 352 ALMSGLI----QTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFR 402
GL+ G E + F+ + I + +I ++G+++ A+++ +
Sbjct: 343 ITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 403 QMP-KKNSVSWNTMISGYAQAGQMDSA 428
MP K +S W +++S G +D A
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 176/426 (41%), Gaps = 87/426 (20%)
Query: 10 TRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVT 69
+R E KI + + H L+ S F + + K+ ++ A R+F+ + N+
Sbjct: 22 SRNEWKKINASIIIHGLSQSS------FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFL 75
Query: 70 YNSMISVFAKNGKISDARQLFDKMSQR--------------------------------- 96
YNS+I + N D +++ ++ ++
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 97 -------NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
++V+ N +I Y+ + +A K+FD M ERD SW +++ Y R G+++KA+
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAK 195
Query: 150 ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQN 205
L L+ DK W ++I+GY G + +A F M + D +S S+L Q
Sbjct: 196 GLFHLMLDK-TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 206 GKMGLA--LHFFEKMAE--KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
G + L +H + + K N ++ + G +S A QLF ++ + +SW TM+
Sbjct: 255 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 314
Query: 262 CGFARHGKITEARRLFDSM-----------------PCKNVVSWNAMIAAY---AQDLQI 301
G+A HG A F+ M C +V W + + QD QI
Sbjct: 315 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 374
Query: 302 DEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQT 360
+ K+ H + +I+ R GKL+ A E+ MP K D +L+S
Sbjct: 375 EP------KIEH-----YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP 423
Query: 361 GRVDEA 366
G +D A
Sbjct: 424 GNLDVA 429
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 43/318 (13%)
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL-VLMGREGKKPDQSTFXXXXX 483
MD A +F + N+ +NS+I + NSLY D ++ L+ + + PD+ TF
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
+G Q+H ++ K G + NALI MY K + A +VF + D+IS
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 544 WNSLISGYA--------------------------LNGYA-----IEAFKAFKQMLSEEV 572
WNSL+SGYA ++GY +EA F++M +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA- 631
PD+++ I +L +C+ G G E + L+++ + G + +A
Sbjct: 238 EPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 632 --FNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHNASNYITLSNM 687
F + G DV + W +++ H N I F M+ ++++P N ++ L +
Sbjct: 297 QLFGQMEGKDVIS----WSTMISGYAYHGNAHGAIETFNEMQRAKVKP-NGITFLGLLSA 351
Query: 688 HAEAGRWEEVERLRVLMR 705
+ G W+E R +MR
Sbjct: 352 CSHVGMWQEGLRYFDMMR 369
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 198/675 (29%), Positives = 339/675 (50%), Gaps = 79/675 (11%)
Query: 85 DARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA----SKLFDVMPERDNFSWALMITCYT 140
DARQ+F +M++R+L WNT++ EE S +F + DNF+ +
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV------ 65
Query: 141 RKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLA 200
L+ EL E+ + +I G+ KK ++ DL +S++
Sbjct: 66 ---ALKACGELREV--------NYGEMIHGFVKK----------DVTLGSDLYVGSSLIY 104
Query: 201 GYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAV 255
Y + G+M AL F+++ + ++V+W+ MVSGF +G A + F ++ P+ V
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 256 SWVTMLC----------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
+ +T++ G HG + RR F + ++ N+++ YA+ EAV
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVI--RRGFSN----DLSLVNSLLNCYAKSRAFKEAV 218
Query: 306 KLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE 365
LF + KD +SWST+I Y++ G AA AL L+ +D+
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNG-----------------AAAEAL---LVFNDMMDD 258
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQM 425
++ ++T + A + GR L + + + + VS ++ Y +
Sbjct: 259 GTE--PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS-TALVDMYMKCFSP 315
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG-KKPDQSTFXXXXXX 484
+ A +F + +++VSW +LI+GF N + +++ +M E +PD
Sbjct: 316 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
+ H Y++K G+ ++ F+ +L+ +Y++CG + +A +VF I D + W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 545 NSLISGYALNGYAIEAFKAFKQML-SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
SLI+GY ++G +A + F M+ S EV P++VTF+ +LSACSHAGL ++GL +FK MV
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIG 663
D+ + P EHY+ LVDLLGR+G L+ A + + M + G+LLGACR+H+N E+
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMA 555
Query: 664 EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQ 723
E A +L ELE ++A Y+ +SN++ G WE VE+LR ++ + K S IE++ +
Sbjct: 556 ETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRK 615
Query: 724 IQCFLSDDSGRLRPE 738
+ F++DD L PE
Sbjct: 616 VHRFVADD--ELHPE 628
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 199/411 (48%), Gaps = 44/411 (10%)
Query: 62 TIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
T+ +L +S+I ++ K G++ +A ++FD++ + ++V+W++M++G+ N +A + F
Sbjct: 91 TLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFF 150
Query: 122 -------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLES---ACWNSVIAGY 171
DV P+R + +++ T+ R + V + S + NS++ Y
Sbjct: 151 RRMVMASDVTPDR--VTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWN 227
AK F +A +F ++ KD++S+++++A Y QNG AL F M E NV +
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 228 LMVSGFVNSGDLSSARQLFE---------KIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
++ + DL R+ E ++ A+ + M C F+ EA +F
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC-FSPE----EAYAVFS 323
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL-----PHKDGVSWSTIINGYIRVGKLD 333
+P K+VVSW A+I+ + + +++ F + D + ++ +G L+
Sbjct: 324 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLE 383
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
+A+ ++ + + + + L++ G + ASK+FN ++ +DT+ W S+I G+
Sbjct: 384 QAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYG 443
Query: 390 QSGRMDEALDLFRQM-----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
G+ +AL+ F M K N V++ +++S + AG + IF+ M
Sbjct: 444 IHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 193/464 (41%), Gaps = 44/464 (9%)
Query: 12 GENHKIKMTSMKHKLTIGSIG-GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTY 70
GE ++ M H + G ++ + I K G++ EA+R+F ++VT+
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWN-----TMIAG--YLHNSMVEEASKLFDV 123
+SM+S F KNG A + F +M + V+ + T+++ L NS + F +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 124 MPERDNFSWAL-----MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
R FS L ++ CY + ++A L +++ +K + W++VIA Y + G +
Sbjct: 191 ---RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVIACYVQNGAAA 246
Query: 179 DAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALH--FFEKMAEKNVVSWNLMV 230
+A VFN M P V + + G H K E V +V
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 231 SGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
++ A +F +IP + VSWV ++ GF +G + F M +N +A
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 291 M----IAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIING-----YIRVGKLDEAREVYNQ 341
+ + +L E K F K G + I Y R G L A +V+N
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN-----SMIAGFCQSGRMDE 396
+ KD T+L++G G+ +A + FN + + N S+++ +G + E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 397 ALDLFRQMPKKNSVSWN-----TMISGYAQAGQMDSAENIFQAM 435
L +F+ M ++ N ++ + G +D+A I + M
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 166/371 (44%), Gaps = 53/371 (14%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R FSN +L NS+++ +AK+ +A LF +++++++SW+T+IA Y+ N E
Sbjct: 192 RGFSN----DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 117 ASKLFDVMPERDNFSWALMITCYTR----KGKLEKARELLELVPDK---LESACWNSVIA 169
A +F+ M + + C + LE+ R+ EL K E +++
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM 229
Y K +A VF+ +P KD+VS+ ++++G+T NG MA +++ +++M
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG-----------MAHRSIEEFSIM 356
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
L E P+A+ V +L + G + +A + F S K N
Sbjct: 357 ---------------LLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSN 400
Query: 290 AMIAA-----YAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
I A Y++ + A K+F + KD V W+++I GY GK +A E +N M
Sbjct: 401 PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 460
Query: 345 KDIAAET-----ALMSGLIQTGRVDEASKMFNQLSTRDTICWN-----SMIAGFCQSGRM 394
+++S G + E ++F + + N ++ + G +
Sbjct: 461 SSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDL 520
Query: 395 DEALDLFRQMP 405
D A+++ ++MP
Sbjct: 521 DTAIEITKRMP 531
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 253/467 (54%), Gaps = 42/467 (8%)
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
V W+ ++ Y + G L +AR+V+++MP +D+ + +++G + G ++EA K+F++++ +
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPK------------------------------ 406
D+ W +M+ G+ + + +EAL L+ M +
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 407 ----------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
+ V W++++ Y + G +D A NIF + E+++VSW S+I + ++S +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+ + ++P++ TF ++G Q+H Y+ + G+ F S++L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MY KCG +ESA+ V DL+SW SLI G A NG EA K F +L PD
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF+ +LSAC+HAGL +GL+ F + E + ++HY+CLVDLL R GR E+ +V+
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M +K + LW S+LG C + N+++ E AA L ++EP N Y+T++N++A AG+WEE
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQII 743
++R M++ K PG SW E++ + F++ D+ P QI+
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTS--HPMYNQIV 585
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 214/448 (47%), Gaps = 64/448 (14%)
Query: 51 KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH 110
KV E +R ++ +V +N ++ ++AK G + DAR++FD+M R+L SWN M+ GY
Sbjct: 106 KVHEHIR--TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 111 NSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA---RELLELVPDKL-------- 159
++EEA KLFD M E+D++SW M+T Y +K + E+A L++ VP+
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 160 ----------------------------ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKD 191
+ W+S++ Y K G +A +F+ + KD
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP- 250
+VS+ SM+ Y ++ + F ++ +G +N+ + +L +++
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 251 -------NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDE 303
+P + + +++ + + G I A+ + D P ++VSW ++I AQ+ Q DE
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 304 AVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA-----LM 354
A+K F L D V++ +++ G +++ E + + K + T+ L+
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 355 SGLIQTGRVDEASKMFNQLSTRDT-ICWNSMIAGFCQSGRMD----EALDLFRQMPKKNS 409
L ++GR ++ + +++ + + W S++ G G +D A +LF+ P +N
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENP 522
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEE 437
V++ TM + YA AG+ + + + M+E
Sbjct: 523 VTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 29/323 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK G ++EA +F + K++V++ SMI + K+ + + LF ++ A
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323
Query: 107 GYLH---NSMVEEASKLFDVMPER---DNFSWA--LMITCYTRKGKLEKARELLELVPDK 158
G L+ + EE K R D +S+A ++ YT+ G +E A+ +++ P K
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-K 382
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHF 214
+ W S+I G A+ GQ +A K F+L+ D V++ ++L+ T G + L F
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 215 FEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHG 268
F + EK+ +S + +V SG + + ++P P+ W ++L G + +G
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 269 KI----TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-----IKLPHKDGVSW 319
I A+ LF P +N V++ M YA + +E K+ I + + G SW
Sbjct: 503 NIDLAEEAAQELFKIEP-ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 320 STIINGYIRVGKLDEAREVYNQM 342
+ I D + +YNQ+
Sbjct: 562 TEIKRKRHVFIAADTSHPMYNQI 584
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 206/731 (28%), Positives = 346/731 (47%), Gaps = 111/731 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
N++++++AK +S A +F M R++VSWNT++ L N ++ + F M E
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELV-----PDKLESACWNSVIAGYAKKGQFSDAE 181
D +++ +I+ + +L L LV + + NS+I+ Y+K G AE
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
VF + +D++S N++L G+ NG A +M
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM----------------------- 383
Query: 242 ARQLFEKI-PNPNAVSWVTMLCG---FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
Q +KI P+ V +T +CG F+R G+ + M + + N++I Y +
Sbjct: 384 --QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 298 DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR----EVYNQMPCKDIAAET-- 351
+A LF H+D VSW+++I+ + + G +A+ EV ++ C + T
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 352 ----------ALMSG------LIQTGRVDEASKMFNQLS-TRDTICWNSMIAGFCQSGRM 394
+L+ G L + G + A +S TRD WNS+I+G SG
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 395 DEALDLFRQMPKKNSVSW----------------------------------------NT 414
E+L F+ M ++ + NT
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL---YFDALKSLVLMGREGK 471
+I+ Y + ++SA +F + + N+ SWN +I+ QN F ++L L
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL------ 675
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
+P++ TF G Q H ++++ G+ + FVS AL+ MY+ CG +E+ +
Sbjct: 676 EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS-EEVVPDQVTFIGMLSACSHAG 590
VF + +WNS+IS + +G +A + FK++ S E+ P++ +FI +LSACSH+G
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
++GL +K M E F ++P+ EH +VD+LGR G+L EA+ + G+ AG+WG+L
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 651 LGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
L AC H + ++G+ A L E+EP NAS YI+L+N + G WEE RLR ++ D
Sbjct: 856 LSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 711 KLPGCSWIEVQ 721
KLPG S I+V+
Sbjct: 916 KLPGYSVIDVR 926
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 171/691 (24%), Positives = 321/691 (46%), Gaps = 70/691 (10%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
++L T + +++ + + G++ + LFD++ +++++ WN+MI N A LF M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 125 PERDN-FSWALMITCYTRKGKLEKARELLELVPDKLE------SACWNSVIAGYAKKGQF 177
+ N F ++ + L +R+ L +E S+ N+++ YAK
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGF 233
S AE VF M +D+VS+N+++ NG +L +F+ M E + V+++ ++S
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 234 VNSGDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+ +L+ L + P + +++ +++ G A +F+ + C++V+S
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVIS 359
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS--WSTIINGYIRVGKLDEARE-------- 337
NA++ +A + +EA + ++ D + +T+++ G L +RE
Sbjct: 360 SNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYT 419
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
V +M + + +++ + G +A +F + RD + WNSMI+ F Q+G +A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI----------------------FQAM 435
+LF+++ + S S ++ + A DS++++ + M
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETM 539
Query: 436 EE-RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQV 493
E R++ SWNS+I+G + + ++L++ M REGK + D T
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G H +KS D + N LI MY +C +ESA +VF I +L SWN +IS +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPLA 612
N E F+ F+ + E P+++TF+G+LSA + G + G+ ++ F P
Sbjct: 660 NKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL-- 670
+ LVD+ G LE V R V + + W S++ A H +GE AM L
Sbjct: 717 S--AALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISAHGFHG---MGE-KAMELFK 769
Query: 671 -----SELEPHNASNYITLSNMHAEAGRWEE 696
SE+EP N S++I+L + + +G +E
Sbjct: 770 ELSSNSEMEP-NKSSFISLLSACSHSGFIDE 799
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 233/552 (42%), Gaps = 84/552 (15%)
Query: 120 LFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSD 179
LFD +PER+N T + R++L + E+ SV K G
Sbjct: 71 LFDELPEREN---------RTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGL--- 118
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
++DL + + +L Y + G++ + F+++ EK+V+ WN M++ +G
Sbjct: 119 ---------LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 240 SSARQLF-EKIPNPNAVSWVTML--------------CGFARHGKITEARRLFDSMPCKN 284
+A LF E I N T+L C H E + DS C
Sbjct: 170 IAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSML-HCLAIETGLVGDSSLC-- 226
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
NA++ YA+ + A +F + H+D VSW+TI+ + G ++ + + M
Sbjct: 227 ----NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
A+T S +I A +L+ +++ + +G+
Sbjct: 283 SGQEADTVTFSCVIS------ACSSIEELTLGESLHGLVIKSGYS--------------- 321
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
P+ + N++IS Y++ G ++AE +F+ + R+++S N+++ GF N ++ +A L
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 465 LMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND-LFVSNALIAMYAK 522
M K +PD +T + G +H Y ++ + L V N++I MY K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 523 CGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
CG AE +F DL+SWNS+IS ++ NG+ +A FK+++SE
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY----------- 490
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+CS L+ L C D I + H C L ++G L AF + M
Sbjct: 491 --SCSKFSLSTVLAILTSCDSSDSLIFGKSVH--C---WLQKLGDLTSAFLRLETMSETR 543
Query: 643 NAGLWGSLLGAC 654
+ W S++ C
Sbjct: 544 DLTSWNSVISGC 555
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 192/712 (26%), Positives = 358/712 (50%), Gaps = 66/712 (9%)
Query: 63 IHKNLVTYNSMISVFAKNGKI-SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
+ K+ + N+++S++AK G I DA FD ++ +++VSWN +IAG+ N+M+ +A + F
Sbjct: 153 LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSF 212
Query: 122 DVM---PERDNFSWA--LMITCYTRKGKL--EKARELLELVPDK--LESACW--NSVIAG 170
+M P N++ ++ C + + R++ V + L++ + NS+++
Sbjct: 213 CLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSF 272
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL-- 228
Y + G+ +A +F M KDLVS+N ++AGY N + A F + K VS +
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVT 332
Query: 229 ---MVSGFVNSGDLSSARQLFEKIPNPNAVSWVT-----MLCGFARHGKITEARRLFDSM 280
++ DL+S +++ I + + T ++ +AR G + A F M
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 281 PCKNVVSWNAMIAAYAQDLQ-----------IDEAVKLFIKLPHKDGVSWSTIINGYIRV 329
K+++SWNA++ A+A + ++EA+ L D V+ +++ I V
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL-------DSVTILSLLKFCINV 445
Query: 330 GKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
+ + +EV+ ++ +GL+ +E K+ N+++ +
Sbjct: 446 QGIGKVKEVHGY----------SVKAGLLHD---EEEPKL-----------GNALLDAYA 481
Query: 390 QSGRMDEALDLFRQMPKKNS-VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
+ G ++ A +F + ++ + VS+N+++SGY +G D A+ +F M ++ +W+ ++
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
+ ++ +A+ + G +P+ T + Q H YI++ G +
Sbjct: 542 IYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG-LG 600
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
D+ + L+ +YAKCG ++ A VF + DL+ + ++++GYA++G EA + M
Sbjct: 601 DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT 660
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ PD V ML+AC HAGL GL ++ + ++P E Y+C VDL+ R GRL
Sbjct: 661 ESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRL 720
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMH 688
++A++ V M V+ NA +WG+LL AC + +++G A L + E + N++ +SNM+
Sbjct: 721 DDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMY 780
Query: 689 AEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
A +WE V LR LM+ K K GCSW+EV Q F+S D R ++I
Sbjct: 781 AADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSI 832
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 49/273 (17%)
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQS-GRMDEALDLFRQM-----PKKNSVSW--- 412
R+D+ KMF Q+ + D + WN ++ G S GR E + F+ M PK +SV++
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 413 --------------------------------NTMISGYAQAGQM-DSAENIFQAMEERN 439
N ++S YA+ G + A F + +++
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX---XXXQVGNQ 496
+VSWN++I GF +N++ DA +S LM +E +P+ +T + G Q
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 497 LHEYILKSGYI-NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
+H Y+++ ++ +FV N+L++ Y + GR+E A +FT + DL+SWN +I+GYA N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 556 YAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACS 587
+AF+ F ++ + +V PD VT I +L C+
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 199/456 (43%), Gaps = 76/456 (16%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
HVF N + ++G++EEA +F+ K+LV++N +I+ +A N + A QLF +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
+ VS +++ S++ ++L D+ ++ S+ L + LLE
Sbjct: 322 HKGDVSPDSVTI----ISILPVCAQLTDLASGKEIHSYIL------------RHSYLLE- 364
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK------- 207
+++ N++I+ YA+ G S A F+LM KD++S+N++L + + K
Sbjct: 365 -----DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 208 --------------------------MGLA----LHFFEKMA-----EKNVVSWNLMVSG 232
G+ +H + A E+ N ++
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 233 FVNSGDLSSARQLFEKIPNPNA-VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
+ G++ A ++F + VS+ ++L G+ G +A+ LF M ++ +W+ M
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 292 IAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQM---PC 344
+ YA+ +EA+ +F ++ + + V+ ++ ++ L R+ + +
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
DI + L+ + G + A +F + RD + + +M+AG+ GR EAL ++ M
Sbjct: 600 GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Query: 405 PKKN----SVSWNTMISGYAQAGQMDSAENIFQAME 436
+ N V TM++ AG + I+ ++
Sbjct: 660 TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIR 695
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG-REGKK 472
++++ YA+ +MD + +F+ M+ + V WN ++TG L S + ++ M + K
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPK 119
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV-ESAEQ 531
P TF G +H YI+K+G D V NAL++MYAK G + A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG- 590
F I D++SWN++I+G++ N +AF++F ML E P+ T +L C+
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 591 --LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
G + +V+ ++ + LV R+GR+EEA ++ M K
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G LH + K G+I VS +++ MYAKC R++ +++F ++ +D + WN +++G ++
Sbjct: 40 GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV 99
Query: 554 NGYAIEAFKAFKQM-LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
+ E + FK M ++E P VTF +L C G + G + +++ +E
Sbjct: 100 SC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKA-GLEKDT 157
Query: 613 EHYSCLVDLLGRMGRL-EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
+ LV + + G + +A+ G+ K + W +++ N+ F + L
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADK-DVVSWNAIIAGFS-ENNMMADAFRSFCLM 215
Query: 672 ELEPHNASNYITLSNM 687
EP NY T++N+
Sbjct: 216 LKEP-TEPNYATIANV 230
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/648 (27%), Positives = 318/648 (49%), Gaps = 55/648 (8%)
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
V ++ + G+A DA ++F+ M D +N M+ G+T G A+ F
Sbjct: 58 VTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQF 117
Query: 215 FEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFAR 266
+ +M + + ++ ++ L +++ + VS V +++ + +
Sbjct: 118 YSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK 177
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAY-------AQDLQIDEAVKLFIKLPHKDGVSW 319
G +A ++F+ MP +++VSWN+MI+ Y + + E +K K P +
Sbjct: 178 LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK-PDRFSTMS 236
Query: 320 STIINGYI---RVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
+ ++ ++GK V +++ D+ T+++ + G V A ++FN + R
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR 296
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM----------------ISGYA 420
+ + WN MI + ++GR+ +A F++M ++N + + + I GYA
Sbjct: 297 NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYA 356
Query: 421 --------------------QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
+ GQ+ SAE IF M E+N++SWNS+I ++QN + AL
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
+ + PD +T G ++H YI+KS Y ++ + N+L+ MY
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
A CG +E A + F I D++SWNS+I YA++G+ + F +M++ V P++ TF
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 581 GMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDV 640
+L+ACS +G+ ++G + F+ M ++ I+P EHY C++DL+GR G A + M
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Query: 641 KANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
A +WGSLL A R HK++ I EFAA ++ ++E N Y+ L NM+AEAGRWE+V R+
Sbjct: 597 VPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656
Query: 701 RVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGIS 748
++LM K + S +E + + F + D + I +L +S
Sbjct: 657 KLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 219/465 (47%), Gaps = 66/465 (14%)
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERDNFSW 132
FA + + DA QLFD+M++ + WN MI G+ + EA + + M + D F++
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 133 ALMITCYTRKGKLEKARELLELVPDKL----ESACWNSVIAGYAKKGQFSDAEKVFNLMP 188
+I LE+ +++ +V KL + NS+I+ Y K G DAEKVF MP
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVI-KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNS---GDL 239
+D+VS+NSM++GY G +L F++M ++ L V S G
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+ +I + + ++L ++++G+++ A R+F+ M +N+V+WN MI YA++
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 300 QIDEAVKLFIKLPHKDGVSWSTIIN-GYIRVGKLDEAREVYNQ------MPCKDIAAETA 352
++ +A F K+ ++G+ I + + + E R ++ +P + ETA
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP--HMVLETA 370
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM------PK 406
L+ + G++ A +F++++ ++ I WNS+IA + Q+G+ AL+LF+++ P
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD 430
Query: 407 ---------------------------------KNSVSWNTMISGYAQAGQMDSAENIFQ 433
N++ N+++ YA G ++ A F
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ +++VSWNS+I + + ++ M P++STF
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 212/425 (49%), Gaps = 33/425 (7%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVT----YNSMISVFAKNGKISDARQLFDKMSQRNL 98
I + + +EE ++ + I V+ NS+IS++ K G DA ++F++M +R++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKARELL 152
VSWN+MI+GYL + LF M P+R + AL + K+ K
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH-C 255
Query: 153 ELVPDKLESA---CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
V ++E+ S++ Y+K G+ S AE++FN M +++V++N M+ Y +NG++
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 210 LALHFFEKMAEKN------VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
A F+KM+E+N + S NL+ + + G + P+ V ++
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL-PHMVLETALIDM 374
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSW 319
+ G++ A +FD M KNV+SWN++IAAY Q+ + A++LF +L D +
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLST 375
++I+ Y L E RE++ + + T +++ L+ G +++A K FN +
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENI 431
+D + WNS+I + G ++ LF +M N ++ ++++ + +G +D
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554
Query: 432 FQAME 436
F++M+
Sbjct: 555 FESMK 559
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
L + +YN CK +++E +G R E +G +
Sbjct: 6 LSQCYRIYNSDACKCVSSENHQTTGKRNGNRNLEFD------------------SGISKP 47
Query: 392 GRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
R+ D ++ + N + + G+A + M+ A +F M + + WN +I GF
Sbjct: 48 ARL-VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFT 106
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
LY +A++ M G K D T+ + G ++H ++K G+++D++
Sbjct: 107 SCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVY 166
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE 571
V N+LI++Y K G AE+VF + D++SWNS+ISGY G + FK+ML
Sbjct: 167 VCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG 226
Query: 572 VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA 631
PD+ + + L ACSH G ++ V + ++D+ + G + A
Sbjct: 227 FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 632 FNVVRGMDVKANAGLWGSLLGA 653
+ GM ++ N W ++G
Sbjct: 287 ERIFNGM-IQRNIVAWNVMIGC 307
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 203/433 (46%), Gaps = 47/433 (10%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
++ K+GK V S +++ S++ +++K G++S A ++F+ M QRN+V+WN
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE---------- 153
MI Y N V +A F M E++ ++ + L A +LE
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI-----NLLPASAILEGRTIHGYAMR 358
Query: 154 --LVPDK-LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGL 210
+P LE+A +I Y + GQ AE +F+ M K+++S+NS++A Y QNGK
Sbjct: 359 RGFLPHMVLETA----LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 211 ALHFFEKMAEKNVVSWNLMVS----GFVNSGDLSSARQLFEKIPN----PNAVSWVTMLC 262
AL F+++ + ++V + ++ + S LS R++ I N + +++
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL------PHKDG 316
+A G + +AR+ F+ + K+VVSWN++I AYA +V LF ++ P+K
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKS- 533
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFN 371
++++++ G +DE E + M + I ++ + +TG A +
Sbjct: 534 -TFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 372 QLSTRDTI-CWNSMIAGFCQSGRM---DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDS 427
++ T W S++ + + A + +M N+ + +++ YA+AG+ +
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 428 AENIFQAMEERNI 440
I ME + I
Sbjct: 653 VNRIKLLMESKGI 665
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 151/337 (44%), Gaps = 49/337 (14%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
H+ + I G+ G+++ A +F KN++++NS+I+ + +NGK A +LF ++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL- 422
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
W++ S+V +++ + ++P Y L + RE+
Sbjct: 423 ------WDS--------SLVPDSTTIASILP------------AYAESLSLSEGREIHAY 456
Query: 155 VPDKLESACW------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
+ ++S W NS++ YA G DA K FN + +KD+VS+NS++ Y +G
Sbjct: 457 I---VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFG 513
Query: 209 GLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVT 259
+++ F +M N ++ +++ SG + + FE + +P +
Sbjct: 514 RISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGC 573
Query: 260 MLCGFARHGKITEARRLFDSMP-CKNVVSWNAMIAAYA--QDLQIDE-AVKLFIKLPHKD 315
ML R G + A+R + MP W +++ A +D+ I E A + K+ H +
Sbjct: 574 MLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDN 633
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+ ++N Y G+ ++ + M K I+ ++
Sbjct: 634 TGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSS 670
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 276/509 (54%), Gaps = 18/509 (3%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSW 319
+ GK+ +A R+ + ++ +I + +A+++ + +D
Sbjct: 56 LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLA 115
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL------ 373
+ +I Y +G +D AR+V+++ + I AL L G +E ++ ++
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 374 STRDTICW--NSMIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDS 427
S R T + + +A C + + ++ + ++ S T++ YA+ G +D
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK--KPDQSTFXXXXXXX 485
A +F M RN+VSW+++I + +N F+AL++ M RE K P+ T
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWN 545
+ G +H YIL+ G + L V +AL+ MY +CG++E ++VF + D++SWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
SLIS Y ++GY +A + F++ML+ P VTF+ +L ACSH GL +G LF+ M D
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF 665
I+P EHY+C+VDLLGR RL+EA +V+ M + +WGSLLG+CR+H N+E+ E
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
A+ RL LEP NA NY+ L++++AEA W+EV+R++ L+ + KLPG W+EV+ ++
Sbjct: 476 ASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMY 535
Query: 726 CFLSDDSGRLRPETIQIILIGISADIRDK 754
F+S D E I L+ ++ D+++K
Sbjct: 536 SFVSVDEFNPLMEQIHAFLVKLAEDMKEK 564
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 215/488 (44%), Gaps = 80/488 (16%)
Query: 27 TIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSN------------------------- 61
+I S G + N NQ I L K GK+++A+RV S
Sbjct: 38 SISSGAGAKISN-NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDA 96
Query: 62 -TIHKNLVTYNS---------MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
+H++++ S +I +++ G + AR++FDK +R + WN +
Sbjct: 97 LRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 112 SMVEEASKLF----DVMPERDNFSWALMI-TCYTRK---GKLEKARELLELVPDKLESA- 162
EE L+ + E D F++ ++ C + L K +E+ + + S+
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 163 --CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-EKMA 219
+++ YA+ G A VF MPV+++VS+++M+A Y +NGK AL F E M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 220 EKNVVSWN--LMVSGFVNSGDLSSARQ------------LFEKIPNPNAVSWVTMLCGFA 265
E S N MVS L++ Q L +P +A+ VTM +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL--VTM---YG 331
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWST 321
R GK+ +R+FD M ++VVSWN++I++Y +A+++F ++ V++ +
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 322 IINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR 376
++ G ++E + ++ M K A M L+ + R+DEA+KM + T
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 377 D-TICWNSMIAGFCQSGRMDEALDLFRQ---MPKKNSVSWNTMISGYAQAGQMDSAENIF 432
W S++ G ++ A R+ + KN+ ++ + YA+A D + +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 433 QAMEERNI 440
+ +E R +
Sbjct: 512 KLLEHRGL 519
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 27/325 (8%)
Query: 14 NHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSM 73
NH +K + LT HV+ + + G V+ A VF +N+V++++M
Sbjct: 196 NHLMKGKEIHAHLTRRGYSS-HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 74 ISVFAKNGKISDARQLFDKM------SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
I+ +AKNGK +A + F +M S N V+ +++ + +E+ + + R
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 128 DNFS----WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
S + ++T Y R GKLE + + + + D+ + WNS+I+ Y G A ++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQI 373
Query: 184 FNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFV 234
F M V++ S+L + G + FE M + + + MV
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 235 NSGDLSSARQLFEKI-PNPNAVSWVTMLCGFARHGKITEA----RRLFDSMPCKNVVSWN 289
+ L A ++ + + P W ++L HG + A RRLF P KN ++
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP-KNAGNYV 492
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPHK 314
+ YA+ DE ++ L H+
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHR 517
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 262/475 (55%), Gaps = 7/475 (1%)
Query: 250 PNPNAVSWVTMLCGFARH---GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
P+ +AV+ V CG + GK A+ L + + C V ++ Y++ I+ A K
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGL-CGCVYVQTGLVGLYSRLGYIELAKK 160
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEA 366
F + K+ VSW+++++GY+ G+LDEAR V++++P KD + ++S + G + A
Sbjct: 161 AFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNA 220
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMD 426
+F+ + + WN +I G+ M A F MP+KN VSW TMISGY + G +
Sbjct: 221 CSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQ 280
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK--KPDQSTFXXXXXX 484
SAE +F+ M +++ + ++++I + QN DALK M +PD+ T
Sbjct: 281 SAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA 340
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
G + YI + G D +S +LI +Y K G A ++F+ + D +S+
Sbjct: 341 NSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSY 400
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+++I G +NG A EA F M+ +++ P+ VTF G+LSA SH+GL +G F M +
Sbjct: 401 SAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-K 459
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
D +EP A+HY +VD+LGR GRLEEA+ +++ M ++ NAG+WG+LL A +H N+E GE
Sbjct: 460 DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGE 519
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
A +LE L+ +++ GRW++ +R +++K+ K GCSW+E
Sbjct: 520 IACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 194/407 (47%), Gaps = 62/407 (15%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+LG +E A + F + KN V++NS++ + ++G++ +AR++FDK+ +++ VSWN +I+
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV 167
Y + A LF MP + SW ++I Y +++ AR + +P K W ++
Sbjct: 211 YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQK-NGVSWITM 269
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN----- 222
I+GY K G AE++F LM KD + Y++M+A YTQNGK AL F +M E+N
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 223 -------VVSWN-----------------------------LMVSGFVNSGDLSSARQLF 246
VVS N ++ ++ GD + A ++F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 247 EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQID 302
+ + VS+ M+ G +G TEA LF +M K NVV++ +++AY+ +
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 303 EAVKLFIKL------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA---AETAL 353
E K F + P D + +++ R G+L+EA E+ MP + A L
Sbjct: 450 EGYKCFNSMKDHNLEPSAD--HYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLL 507
Query: 354 MSGL---IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
SGL ++ G + A +L T T + + + GR D+A
Sbjct: 508 ASGLHNNVEFGEI--ACSHCVKLETDPTGYLSHLAMIYSSVGRWDDA 552
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 156/322 (48%), Gaps = 45/322 (13%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
Y++ G + LA F+ +AEKN VSWN ++ G++ SG+L AR++F+KIP +AVSW ++
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST 321
+A+ G + A LF +MP K+ SWN +I Y ++ A F +P K+GVSW T
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWIT 268
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----- 376
+I+GY ++G + A E++ M KD A+++ Q G+ +A K+F Q+ R
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 377 ------------------------------------DTICWNSMIAGFCQSGRMDEALDL 400
D + S+I + + G +A +
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 388
Query: 401 FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLY 456
F + KK++VS++ MI G G A ++F AM E+ N+V++ L++ + + L
Sbjct: 389 FSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLV 448
Query: 457 FDALKSLVLMGREGKKPDQSTF 478
+ K M +P +
Sbjct: 449 QEGYKCFNSMKDHNLEPSADHY 470
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 187/364 (51%), Gaps = 22/364 (6%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSW 132
++ ++++ G I A++ FD ++++N VSWN+++ GYL + ++EA ++FD +PE+D SW
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSW 204
Query: 133 ALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL 192
L+I+ Y +KG + A L +P K A WN +I GY + A F+ MP K+
Sbjct: 205 NLIISSYAKKGDMGNACSLFSAMPLK-SPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI--- 249
VS+ +M++GYT+ G + A F M++K+ + ++ M++ + +G A +LF ++
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 250 ---PNPNAVSWVTMLC-----GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI 301
P+ ++ +++ G G E+ + +++S ++I Y +
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS-TSLIDLYMKGGDF 382
Query: 302 DEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI--- 358
+A K+F L KD VS+S +I G G EA ++ M K I +GL+
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 359 -QTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSW 412
+G V E K FN + + + M+ ++GR++EA +L + MP + N+ W
Sbjct: 443 SHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVW 502
Query: 413 NTMI 416
++
Sbjct: 503 GALL 506
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/576 (29%), Positives = 298/576 (51%), Gaps = 64/576 (11%)
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
S ++++S + N L A LF+ + +P ++W +++ F ++A F M
Sbjct: 40 TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRAS 99
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFI-KLPHK-DGVSWSTIINGYIRV---GKL 332
P NV DL+ E+V FI +L D + + ++N Y ++ G
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 333 DEAREVYNQMPCK-------DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
V+++MP + D+ AET +M I D ++F + +D + +N++I
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI-----DSVRRVFEVMPRKDVVSYNTII 214
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVS---------------------------- 411
AG+ QSG ++AL + R+M P ++S
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID 274
Query: 412 -----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
++++ YA++ +++ +E +F + R+ +SWNSL+ G++QN Y +AL+ M
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
KP F +G QLH Y+L+ G+ +++F+++AL+ MY+KCG +
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
++A ++F + +D +SW ++I G+AL+G+ EA F++M + V P+QV F+ +L+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
SH GL ++ F M + + + EHY+ + DLLGR G+LEEA+N + M V+ +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
W +LL +C VHKNLE+ E A ++ ++ N Y+ + NM+A GRW+E+ +LR+ MR
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
K K P CSWIE++N+ F+S D R P +I
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGD--RSHPSMDKI 608
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 202/415 (48%), Gaps = 49/415 (11%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMI 136
I R++F+ M ++++VS+NT+IAGY + M E+A ++ D+ P D+F+ + ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP--DSFTLSSVL 249
Query: 137 TCYTRKGKLEKARELLELVPDK-LESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
++ + K +E+ V K ++S + +S++ YAK + D+E+VF+ + +D +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
S+NS++AGY QNG+ AL F +M V + S + P
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI-----------------PA 352
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
T+ G HG + R F S N+ +A++ Y++ I A K+F ++
Sbjct: 353 CAHLATLHLGKQLHGYVL--RGGFGS----NIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKM 369
D VSW+ II G+ G EA ++ +M + + A A+++ G VDEA
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 370 FNQLS-----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAG 423
FN ++ ++ + ++ ++G+++EA + +M + + S W+T++S +
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK 526
Query: 424 QMDSAENIFQ---AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG--KKP 473
++ AE + + ++ N+ ++ + + N + + K + M ++G KKP
Sbjct: 527 NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 205/474 (43%), Gaps = 84/474 (17%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PE 126
+IS++ + +A LF + +++W ++I + S+ +A F M P+
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 127 RDNFSWALMITC-------------------------YTRKGKLEKARELLEL------- 154
+ F +++ +C YT + +LL +
Sbjct: 105 HNVFP-SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 155 -VPDKLESACWNS---------VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
V D++ NS I + +VF +MP KD+VSYN+++AGY Q
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSG----FVNSGDLSSARQLFEKIPNPNAVSWV-- 258
+G AL +M ++ + +S F D+ +++ + S V
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 259 --TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF---IKLPH 313
+++ +A+ +I ++ R+F + C++ +SWN+++A Y Q+ + +EA++LF +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 314 KDG-VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASK 368
K G V++S++I + L ++++ + + + S L+ + G + A K
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 369 MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQ 424
+F++++ D + W ++I G G EA+ LF RQ K N V++ +++ + G
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+D A F +M + + G Q ++ A+ L+GR GK + F
Sbjct: 460 VDEAWGYFNSMTK---------VYGLNQELEHYAAVAD--LLGRAGKLEEAYNF 502
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V I ++ +S++ ++AK+ +I D+ ++F ++ R+ +SWN+++AGY+ N EA
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP--DKLESACWNSVIAGYAKKG 175
+LF M+T + G A ++P L + + GY +G
Sbjct: 328 LRLF-----------RQMVTAKVKPG----AVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
F N+ LV Y++ G + A F++M + VSW ++ G
Sbjct: 373 GFGS-----NIFIASALVDM------YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 236 SGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
G A LFE++ PN V++V +L + G + EA F+SM V N
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMT--KVYGLNQE 479
Query: 292 IAAYA--QDL-----QIDEAVKLFIKL-PHKDGVSWSTIIN 324
+ YA DL +++EA K+ G WST+++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 165/359 (45%), Gaps = 43/359 (11%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
K ++E++ RVFS ++ +++NS+++ + +NG+ ++A +LF +M + V+++
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDK 158
++I H + + +L + + F + ++ Y++ G ++ AR++ + + +
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NV 406
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHF 214
L+ W ++I G+A G +A +F M + + V++ ++L + G + A +
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 215 FEKMAE-----KNVVSWNLMVSGFVNSGDLSSARQLFEKI-PNPNAVSWVTMLCGFARHG 268
F M + + + + + +G L A K+ P W T+L + H
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK 526
Query: 269 KITEARRLFD---SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK-----LPHKDGVSWS 320
+ A ++ + ++ +N+ ++ M YA + + E KL ++ L K SW
Sbjct: 527 NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 586
Query: 321 TIIN---GYI-------RVGKLDE-AREVYNQMPCKDIAAETALMSGLIQTGRVDEASK 368
+ N G++ + K++E + V QM + A+T SG++ VDE K
Sbjct: 587 EMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADT---SGVLHD--VDEEHK 640
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 309/604 (51%), Gaps = 40/604 (6%)
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VF++ P L S +++ YT+ + ALH F+++ +N S+N ++ + + A
Sbjct: 50 VFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDA 107
Query: 243 RQLF----------EKIPNPNAVSWVTML-----C------GFAR--HGKITEARRLFDS 279
LF P+++S +L C AR HG + R FDS
Sbjct: 108 FSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI--RGGFDS 165
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVY 339
+V N MI Y + I+ A K+F ++ +D VSW+++I+GY + G ++ +++Y
Sbjct: 166 ----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 340 NQM-PCKDIAAETALMSGLIQT-GR-------VDEASKMFNQLSTRDTICWNSMIAGFCQ 390
M C D + + Q G+ ++ KM D N++I + +
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 391 SGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
G +D A LF +M +K+SV++ +ISGY G + A +F ME + +WN++I+G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
+QN+ + + + S M R G +P+ T + G ++H + +++G N++
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+V+ ++I YAK G + A++VF + LI+W ++I+ YA++G + A F QM
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
PD VT +LSA +H+G ++ +F M+ + IEP EHY+C+V +L R G+L +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAE 690
A + M + A +WG+LL V +LEI FA RL E+EP N NY ++N++ +
Sbjct: 522 AMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQ 581
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISAD 750
AGRWEE E +R M+ K+PG SWIE + ++ F++ DS R + + I+ G+
Sbjct: 582 AGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVES 641
Query: 751 IRDK 754
+ DK
Sbjct: 642 MSDK 645
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 202/414 (48%), Gaps = 35/414 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N MI+ + K I AR++FD+MS+R++VSWN+MI+GY + E+ K++ M +F
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 131 --SWALMITCYTRKGK-------LEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAE 181
+ +I+ + G+ LE ++++E S C N+VI YAK G A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC-NAVIGFYAKCGSLDYAR 289
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD--- 238
+F+ M KD V+Y ++++GY +G + A+ F +M + +WN M+SG + +
Sbjct: 290 ALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEE 349
Query: 239 -LSSARQLFEKIPNPNAVSWVTMLCGFA-----RHGKITEARRLFDSMPCKNVVSWNAMI 292
++S R++ PN V+ ++L + GK A + + N+ ++I
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD-NNIYVTTSII 408
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC----KDIA 348
YA+ + A ++F + ++W+ II Y G D A +++QM C D
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQ 403
TA++S +G D A +F+ + T+ I + M++ ++G++ +A++ +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 404 MP-KKNSVSWNTMISGYAQAGQMDSA----ENIFQAMEERNIVSWNSLITGFLQ 452
MP + W +++G + G ++ A + +F+ ME N ++ + + Q
Sbjct: 529 MPIDPIAKVWGALLNGASVLGDLEIARFACDRLFE-MEPENTGNYTIMANLYTQ 581
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 202/468 (43%), Gaps = 75/468 (16%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F +++ +H+ +L R+ +I + + +IS + + + A +FD+++ R
Sbjct: 32 FTRHRLPLHVLQL-----HARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVR 86
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLF------------DVMPERDNFSWAL---------- 134
N S+N ++ Y M +A LF P+ + S L
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 135 --------------------------MITCYTRKGKLEKARELLELVPDKLESACWNSVI 168
MIT YT+ +E AR++ + + ++ + WNS+I
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER-DVVSWNSMI 205
Query: 169 AGYAKKGQFSDAEKVFN-LMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+GY++ G F D +K++ ++ D V+ S+ Q+ + L +KM E ++
Sbjct: 206 SGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHI 265
Query: 224 VS----WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
N ++ + G L AR LF+++ ++V++ ++ G+ HG + EA LF
Sbjct: 266 QMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSE 325
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEA 335
M + +WNAMI+ Q+ +E + F ++ + V+ S+++ L
Sbjct: 326 MESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 336 REVY----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+E++ +I T+++ + G + A ++F+ R I W ++I +
Sbjct: 386 KEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVH 445
Query: 392 GRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
G D A LF QM K + V+ ++S +A +G D A++IF +M
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 207/432 (47%), Gaps = 33/432 (7%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-- 93
VF N I + K +E A +VF +++V++NSMIS ++++G D ++++ M
Sbjct: 167 VFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLA 226
Query: 94 ---SQRNLVSWNTMIAGYLHNS----MVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
+ N V+ ++ +S +E K+ + + D +I Y + G L+
Sbjct: 227 CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLD 286
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG 206
AR L + + +K +S + ++I+GY G +A +F+ M L ++N+M++G QN
Sbjct: 287 YARALFDEMSEK-DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNN 345
Query: 207 KMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQL----FEKIPNPNAVSWV 258
++ F +M + N V+ + ++ S +L +++ + N
Sbjct: 346 HHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTT 405
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHK 314
+++ +A+ G + A+R+FD+ +++++W A+I AYA D A LF ++
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKP 465
Query: 315 DGVSWSTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKM 369
D V+ + +++ + G D A+ +++ M K + ++S L + G++ +A +
Sbjct: 466 DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 370 FNQLSTRDTIC--WNSMIAGFCQSGRMD---EALDLFRQMPKKNSVSWNTMISGYAQAGQ 424
+++ D I W +++ G G ++ A D +M +N+ ++ M + Y QAG+
Sbjct: 526 ISKMPI-DPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGR 584
Query: 425 MDSAENIFQAME 436
+ AE + M+
Sbjct: 585 WEEAEMVRNKMK 596
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I + +++ I + KLG + A RVF N ++L+ + ++I+ +A +G
Sbjct: 389 HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDS 448
Query: 84 SDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WAL 134
A LFD+M ++ + V+ +++ + H+ + A +FD M + + +A
Sbjct: 449 DSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYAC 508
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDA----EKVFNLMPVK 190
M++ +R GKL A E + +P + W +++ G + G A +++F + P +
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP-E 567
Query: 191 DLVSYNSMLAGYTQNGK 207
+ +Y M YTQ G+
Sbjct: 568 NTGNYTIMANLYTQAGR 584
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 270/474 (56%), Gaps = 32/474 (6%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS--------- 318
G + A +LFD +P +V N ++ AQ ++ ++ V L+ ++ K GVS
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFV 118
Query: 319 --------WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
W + NG+ GK+ V N+ + AL+ G + AS++F
Sbjct: 119 LKACSKLEWRS--NGFAFHGKVVRHGFVLNEY------VKNALILFHANCGDLGIASELF 170
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
+ + + W+SM +G+ + G++DEA+ LF +MP K+ V+WN MI+G + +MDSA
Sbjct: 171 DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARE 230
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+F E+++V+WN++I+G++ +AL M G+ PD T
Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 491 XQVGNQLHEYILKSGYIND-LFVS----NALIAMYAKCGRVESAEQVFTAIECVDLISWN 545
+ G +LH YIL++ ++ ++V NALI MYAKCG ++ A +VF ++ DL +WN
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+LI G AL+ +A + + F++M +V P++VTFIG++ ACSH+G ++G F M +
Sbjct: 351 TLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDM 409
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF 665
+ IEP +HY C+VD+LGR G+LEEAF V M ++ NA +W +LLGAC+++ N+E+G++
Sbjct: 410 YNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKY 469
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
A +L + + +Y+ LSN++A G+W+ V+++R + D R K G S IE
Sbjct: 470 ANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 57/333 (17%)
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----- 223
A + G A K+F+ +P D+ N +L G Q+ K + + +M ++ V
Sbjct: 54 ASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRY 113
Query: 224 -----------VSW---------NLMVSGFV--------------NSGDLSSARQLFEKI 249
+ W ++ GFV N GDL A +LF+
Sbjct: 114 TFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDS 173
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
+ V+W +M G+A+ GKI EA RLFD MP K+ V+WN MI + ++D A +LF
Sbjct: 174 AKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFD 233
Query: 310 KLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMS-----GLIQT 360
+ KD V+W+ +I+GY+ G EA ++ +M D+ +L+S G ++T
Sbjct: 234 RFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLET 293
Query: 361 GR-----VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
G+ + E + + + + T WN++I + + G +D A+++FR + ++ +WNT+
Sbjct: 294 GKRLHIYILETASVSSSIYV-GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTL 352
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
I G A S E +F+ M+ + W + +T
Sbjct: 353 IVGLALHHAEGSIE-MFEEMQRLKV--WPNEVT 382
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 83/297 (27%)
Query: 237 GDLSSARQLFEKIPNPN-------------------------------------AVSWVT 259
G L A +LF++IP P+ ++V
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 260 MLC--------GFARHGKITE-------------------------ARRLFDSMPCKNVV 286
C GFA HGK+ A LFD + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
+W++M + YA+ +IDEA++LF ++P+KD V+W+ +I G ++ ++D ARE++++ KD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALDLFR 402
+ A++SG + G EA +F ++ D + S+++ G ++ L
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 403 QMPKKNSVS---------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
+ + SVS WN +I YA+ G +D A +F+ +++R++ +WN+LI G
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 356
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 35/371 (9%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
+ KN I+ G + A +F ++ + V ++SM S +AK GKI +A +LFD+M +
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK 207
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP 156
+ V+WN MI G L ++ A +LFD E+D +W MI+ Y G ++A + + +
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR 267
Query: 157 DKLES---ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS---------YNSMLAGYTQ 204
D E S+++ A G +++ + VS +N+++ Y +
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTM 260
G + A+ F + ++++ +WN ++ G S ++FE++ PN V+++ +
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSI-EMFEEMQRLKVWPNEVTFIGV 386
Query: 261 LCGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-HK 314
+ + G++ E R+ F M N+ + M+ + Q++EA +
Sbjct: 387 ILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEP 446
Query: 315 DGVSWSTI-----INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI-QTGR---VDE 365
+ + W T+ I G + +GK A E M KD + + L+S + TG+ V +
Sbjct: 447 NAIVWRTLLGACKIYGNVELGKY--ANEKLLSMR-KDESGDYVLLSNIYASTGQWDGVQK 503
Query: 366 ASKMFNQLSTR 376
KMF+ +
Sbjct: 504 VRKMFDDTRVK 514
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 289 bits (739), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 205/773 (26%), Positives = 353/773 (45%), Gaps = 104/773 (13%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F + + GK G +++A +VF + +N+MI + NG+ + A L+ M
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 97 ----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL----MITCYTRKGKLEKA 148
L S+ ++ + S+L ++ + S +++ Y + L A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 149 RELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----------------DL 192
R L + +K ++ WNS+++ Y+ G+ + ++F M + D
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 193 VSY------------------------NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
SY N+++A YT+ GKM A +M +VV+WN
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 229 MVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRL-------- 276
++ G+V + A + F + + VS +++ R + L
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
+DS N+ N +I Y++ + F+++ KD +SW+T+I GY + EA
Sbjct: 417 WDS----NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-------DTICWNSMIAGFC 389
E++ + K + + ++ +++ V ++ + ++ DT+ N ++ +
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 532
Query: 390 QSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITG 449
+ M A +F + K+ VSW +MIS A G A +F+ M E TG
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE----------TG 582
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
+S+ + S K G ++H Y+L+ G+ +
Sbjct: 583 LSADSVALLCILSAAASLSALNK---------------------GREIHCYLLRKGFCLE 621
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
++ A++ MYA CG ++SA+ VF IE L+ + S+I+ Y ++G A + F +M
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
E V PD ++F+ +L ACSHAGL ++G K M ++ +EP EHY CLVD+LGR +
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVV 741
Query: 630 EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHA 689
EAF V+ M + A +W +LL ACR H EIGE AA RL ELEP N N + +SN+ A
Sbjct: 742 EAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFA 801
Query: 690 EAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
E GRW +VE++R M+ K PGCSWIE+ ++ F + D + PE+ +I
Sbjct: 802 EQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD--KSHPESKEI 852
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
Query: 494 GNQLHEYILKSGYINDL-FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
G QLH I K+ +L F++ L+ MY KCG ++ AE+VF + +WN++I Y
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
NG A + M E V +F +L AC+ G +L +V+
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHSTG 217
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH-KNLEIGE-FAAMRL 670
+ LV + + L A + G K +A LW S+L + K+LE E F M +
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 671 SELEPHNASNYITLSNMHAEAG 692
+ P ++Y +S + A G
Sbjct: 278 TGPAP---NSYTIVSALTACDG 296
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 245/415 (59%), Gaps = 11/415 (2%)
Query: 319 WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ---TGRVDEASKMFNQLST 375
W+ +I GY GK DEA +Y M ++I + S L++ T + + F+ +
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 376 R-DTICW----NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
R C+ N+MI + + +D A +F +MP+++ +SW +I+ YA+ G M+ A
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAE 236
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+F+++ +++V+W +++TGF QN+ +AL+ M + G + D+ T
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 491 XQVGNQLHEYILKSGYI--NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
+ ++ + KSGY + + + +ALI MY+KCG VE A VF ++ ++ +++S+I
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 549 SGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFA 607
G A +G A EA F M+++ E+ P+ VTF+G L ACSH+GL +QG +F M + F
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
++P +HY+C+VDLLGR GRL+EA +++ M V+ + G+WG+LLGACR+H N EI E AA
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN 722
L ELEP NYI LSN++A AG W V R+R L+++K K P SW+ +N
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 172/365 (47%), Gaps = 37/365 (10%)
Query: 73 MISVFAKNGKISD--ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERD-- 128
+I K G D AR++ + + RN W +I GY +EA ++ M + +
Sbjct: 87 LIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEIT 146
Query: 129 --NFSW-ALMITCYTRKGKLEKARELLELVPDKLESACW----NSVIAGYAKKGQFSDAE 181
+F++ AL+ C T K L R+ +L C+ N++I Y K A
Sbjct: 147 PVSFTFSALLKACGTMK-DLNLGRQ-FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCAR 204
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
KVF+ MP +D++S+ ++A Y + G M A FE + K++V+W MV+GF +
Sbjct: 205 KVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQE 264
Query: 242 ARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFD------SMPCKNVVSWNAM 291
A + F+++ + V+ + A+ G A R P +VV +A+
Sbjct: 265 ALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSAL 324
Query: 292 IAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-DIAAE 350
I Y++ ++EAV +F+ + +K+ ++S++I G G+ EA +++ M + +I
Sbjct: 325 IDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPN 384
Query: 351 T-----ALM----SGLIQTGR--VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
T ALM SGL+ GR D + F TRD + M+ ++GR+ EAL+
Sbjct: 385 TVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH--YTCMVDLLGRTGRLQEALE 442
Query: 400 LFRQM 404
L + M
Sbjct: 443 LIKTM 447
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 149/310 (48%), Gaps = 22/310 (7%)
Query: 159 LESACW--NSVIAGYAKKGQFSD--AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
L+ +C+ +I K G D A +V + ++ + +++ GY GK A+
Sbjct: 77 LDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAM 136
Query: 215 FEKMAEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWV----TMLCGFAR 266
+ M ++ + + S + + DL+ RQ + +V TM+ + +
Sbjct: 137 YGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVK 196
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGY 326
I AR++FD MP ++V+SW +IAAYA+ ++ A +LF LP KD V+W+ ++ G+
Sbjct: 197 CESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGF 256
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ---------LSTRD 377
+ K EA E +++M I A+ ++G I ASK ++ S D
Sbjct: 257 AQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSD 316
Query: 378 TICWNS-MIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
+ S +I + + G ++EA+++F M KN ++++MI G A G+ A ++F M
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV 376
Query: 437 ERNIVSWNSL 446
+ + N++
Sbjct: 377 TQTEIKPNTV 386
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+MI ++ K I AR++FD+M +R+++SW +IA Y +E A++LF+ +P +D
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACWNS---VIAGY----AKKGQFSDAEKV 183
+W M+T + + K ++A E D++E + + +AGY A+ G A++
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYF----DRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 184 FNLM------PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
+ P +V ++++ Y++ G + A++ F M KNV +++ M+ G G
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 238 DLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSM-------PCKNV 285
A LF + PN V++V L + G + + R++FDSM P ++
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD- 422
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKL---PHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+ M+ + ++ EA++L + PH G W G L A ++N
Sbjct: 423 -HYTCMVDLLGRTGRLQEALELIKTMSVEPH--GGVW----------GALLGACRIHNNP 469
Query: 343 PCKDIAAE 350
+IAAE
Sbjct: 470 EIAEIAAE 477
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 24/293 (8%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H T G V+ N I K ++ A +VF ++++++ +I+ +A+ G +
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCY 139
A +LF+ + +++V+W M+ G+ N+ +EA + FD M + D + A I+
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 140 TRKGKLEKARELLELVPDKLESACWNSVIAG-----YAKKGQFSDAEKVFNLMPVKDLVS 194
+ G + A +++ S + VI Y+K G +A VF M K++ +
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSGFVNSGDLSSARQLFEKI 249
Y+SM+ G +G+ ALH F M + N V++ + +SG + RQ+F+ +
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 250 -----PNPNAVSWVTMLCGFARHGKITEARRLFDSM---PCKNVVSWNAMIAA 294
P + M+ R G++ EA L +M P V W A++ A
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV--WGALLGA 462
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 139/343 (40%), Gaps = 55/343 (16%)
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL----------FRQMPKKNSV 410
GR S F+++S + + +S+I+ ++D+ ++L R+ ++
Sbjct: 29 GRTSNNSGTFSEISNQKELLVSSLIS------KLDDCINLNQIKQIHGHVLRKGLDQSCY 82
Query: 411 SWNTMISGYAQAG-QMDS-AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
+I + G MD A + + ++ RN W ++I G+ + +A+ M +
Sbjct: 83 ILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK 142
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
E P TF +G Q H + ++V N +I MY KC ++
Sbjct: 143 EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDC 202
Query: 529 AEQVFTAIECVDLISWNSLI-------------------------------SGYALNGYA 557
A +VF + D+ISW LI +G+A N
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKP 262
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY-- 615
EA + F +M + D+VT G +SAC+ G A++ D + + P ++H
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLG-ASKYADRAVQIAQKSGYSP-SDHVVI 320
Query: 616 -SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
S L+D+ + G +EEA NV M+ K N + S++ H
Sbjct: 321 GSALIDMYSKCGNVEEAVNVFMSMNNK-NVFTYSSMILGLATH 362
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 288 bits (738), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 271/489 (55%), Gaps = 15/489 (3%)
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----WSTIINGYIRVGKLDEARE- 337
NV +NA+ + +++L++++ +D VS +S+++ + E+ +
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRML-RDSVSPSSYTYSSLVKASSFASRFGESLQA 893
Query: 338 -VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
++ + +T L+ TGR+ EA K+F+++ RD I W +M++ + + MD
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
A L QM +KN + N +I+GY G ++ AE++F M ++I+SW ++I G+ QN Y
Sbjct: 954 ANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRY 1013
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+A+ M EG PD+ T ++G ++H Y L++G++ D+++ +AL
Sbjct: 1014 REAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSAL 1073
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MY+KCG +E A VF + +L WNS+I G A +G+A EA K F +M E V P+
Sbjct: 1074 VDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNA 1133
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF+ + +AC+HAGL ++G +++ M++D++I EHY +V L + G + EA ++
Sbjct: 1134 VTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIG 1193
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M+ + NA +WG+LL CR+HKNL I E A +L LEP N+ Y L +M+AE RW +
Sbjct: 1194 NMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRD 1253
Query: 697 VERLRVLMRDKRAGKL-PGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL------IGISA 749
V +R MR+ K+ PG S I + + F + D + + ++L +G++
Sbjct: 1254 VAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAG 1313
Query: 750 DIRDKFNVF 758
+++ NV+
Sbjct: 1314 YVQETENVY 1322
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 195/415 (46%), Gaps = 57/415 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N I+ ++ A +M + N+ +N + G++ S + +L+ M RD+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRML-RDSV 867
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACW-----------NSVIAGYAKKGQFSD 179
S + YT L KA + L++ W ++I Y+ G+ +
Sbjct: 868 S----PSSYTYSS-LVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A KVF+ MP +D +++ +M++ Y + M A +M+EKN + N +++G++ G+L
Sbjct: 923 ARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNL 982
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
A LF ++P + +SW TM+ G++++ + EA +F M
Sbjct: 983 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM------------------- 1023
Query: 300 QIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMS 355
++E + +P D V+ ST+I+ +G L+ +EV+ D+ +AL+
Sbjct: 1024 -MEEGI-----IP--DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1075
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVS 411
+ G ++ A +F L ++ CWNS+I G G EAL +F +M K N+V+
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 412 WNTMISGYAQAGQMDSAENIFQAM-EERNIVS----WNSLITGFLQNSLYFDALK 461
+ ++ + AG +D I+++M ++ +IVS + ++ F + L ++AL+
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 155/313 (49%), Gaps = 23/313 (7%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G HV + I G++ EA +VF ++ + + +M+S + + + A L ++
Sbjct: 901 GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQ 960
Query: 93 MSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA---- 148
MS++N + N +I GY+ +E+A LF+ MP +D SW MI Y++ + +A
Sbjct: 961 MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 149 RELLE--LVPDKLESACWNSVIAGYAKKGQFSDAEKV--FNLMP--VKDLVSYNSMLAGY 202
+++E ++PD++ ++VI+ A G ++V + L V D+ ++++ Y
Sbjct: 1021 YKMMEEGIIPDEV---TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMY 1077
Query: 203 TQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWV 258
++ G + AL F + +KN+ WN ++ G G A ++F K+ PNAV++V
Sbjct: 1078 SKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Query: 259 TMLCGFARHGKITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP- 312
++ G + E RR++ SM NV + M+ +++ I EA++L +
Sbjct: 1138 SVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEF 1197
Query: 313 HKDGVSWSTIING 325
+ V W +++G
Sbjct: 1198 EPNAVIWGALLDG 1210
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 141/359 (39%), Gaps = 71/359 (19%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N I+ ++D A + M+E N+ +N+L GF+ S +L+ V M R+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P S++ + G L +I K G+ + + LI Y+ GR+ A +V
Sbjct: 869 P--SSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 533 FTAIECVDLISWNSLISGYA--------------------------LNGYA-----IEAF 561
F + D I+W +++S Y +NGY +A
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 562 KAFKQM-------------------------------LSEEVVPDQVTFIGMLSACSHAG 590
F QM + E ++PD+VT ++SAC+H G
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 591 LANQGLDLFKCMVED-FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
+ G ++ +++ F ++ S LVD+ + G LE A V + K N W S
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGSLERALLVFFNLP-KKNLFCWNS 1103
Query: 650 LLGACRVHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
++ H + + FA M + ++P NA ++++ AG +E R+ M D
Sbjct: 1104 IIEGLAAHGFAQEALKMFAKMEMESVKP-NAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 50/265 (18%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
KN T N +I+ + G + A LF++M ++++SW TMI GY N EA +F
Sbjct: 964 KNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM 1023
Query: 122 ---DVMPER---------------------------------DNFSWALMITCYTRKGKL 145
++P+ D + + ++ Y++ G L
Sbjct: 1024 MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 1083
Query: 146 EKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAG 201
E+A + +P K CWNS+I G A G +A K+F M ++ + V++ S+
Sbjct: 1084 ERALLVFFNLPKK-NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 202 YTQNGKMGLALHFFEKMAE-----KNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAV 255
T G + + M + NV + MV F +G + A +L + PNAV
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV 1202
Query: 256 SWVTMLCGFARHGKITEARRLFDSM 280
W +L G H + A F+ +
Sbjct: 1203 IWGALLDGCRIHKNLVIAEIAFNKL 1227
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G +E A+ VF N KNL +NS+I A +G +A ++F KM + N V++ +
Sbjct: 1079 KCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVS 1138
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-------WALMITCYTRKGKLEKARELLELVP 156
+ H +V+E +++ M D++S + M+ +++ G + +A EL+ +
Sbjct: 1139 VFTACTHAGLVDEGRRIYRSMI--DDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV 189
+ + W +++ G AE FN + V
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV 1229
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 213/712 (29%), Positives = 349/712 (49%), Gaps = 76/712 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
+++ ++ K + ARQ+FDKM +++V+WNTM++G N A LF M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDK-LESACWNSVIAGYAKKGQFSDAEKVFN 185
D+ S +I ++ K + R L LV K A + +I Y AE VF
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFE 258
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSS 241
+ KD S+ +M+A Y NG L F+ M +V V+ + GDL
Sbjct: 259 EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 242 ARQLFEKIPNPNAVSWVT----MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
+ + + V+ ++ +++ G++ A +LF ++ ++VVSW+AMIA+Y Q
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 298 DLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE--- 350
Q DEA+ LF + + V+ ++++ G V + ++ DI +E
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 351 -TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
TA++S + GR A K F +L +D + +N++ G+ Q G ++A D+++ M K +
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM-KLHG 497
Query: 410 VSWN--TMI---------SGYAQA----GQM-----DSAENIFQAME------------- 436
V + TM+ S YA+ GQ+ DS ++ A+
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 437 --------ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
E++ VSWN ++ G+L + +A+ + M E +P+ TF
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
+VG +H +++ G+ + V N+L+ MYAKCG +ES+E+ F I ++SWN+++
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
S YA +G A A F M E+ PD V+F+ +LSAC HAGL +G +F+ M E I
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
E EHY+C+VDLLG+ G EA ++R M VK + G+WG+LL + R+H NL + A
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALC 797
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEV 720
+L +LEP N S+Y ++ R EV + R K+P CSWIEV
Sbjct: 798 QLVKLEPLNPSHY-------SQDRRLGEVNNV------SRIKKVPACSWIEV 836
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 169/746 (22%), Positives = 319/746 (42%), Gaps = 141/746 (18%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVE 115
++V + I L +N +I+ ++ + +R +FD + +V WN+MI GY +
Sbjct: 22 LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR 81
Query: 116 EASKLFDVMPER-----DNFSWALMITCYTRKGKLEKARELLELVPD-KLESACW--NSV 167
EA F M E D +S+ + +K + +L+ + LES + ++
Sbjct: 82 EALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTAL 141
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-----KN 222
+ Y K A +VF+ M VKD+V++N+M++G QNG AL F M +
Sbjct: 142 VEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDH 201
Query: 223 VVSWNLMVS--------------------GFV------------NSGDLSSARQLFEKIP 250
V +NL+ + GF+ N DL +A +FE++
Sbjct: 202 VSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVW 261
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMP----------------------------- 281
+ SW TM+ +A +G E LFD M
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA 321
Query: 282 ----------CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGK 331
+V ++++ Y++ +++ A +LFI + +D VSWS +I Y + G+
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----------STRDTICW 381
DEA ++ M I ++ ++Q AS++ + S +T
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA-- 439
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
++I+ + + GR AL F ++P K++V++N + GY Q G + A ++++ M+ +
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
+ + G LQ + G+ ++ I
Sbjct: 500 PDSRTMVGMLQTCAFCSDYAR-------------------------------GSCVYGQI 528
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC---VDLISWNSLISGYALNGYAI 558
+K G+ ++ V++ALI M+ KC + +A +F +C +SWN +++GY L+G A
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFD--KCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAIE-PLAEHYS 616
EA F+QM E+ P+ VTF+ ++ A + G+ + +++ F + P+
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS-- 644
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH--KNLEIGEFAAMRLSELE 674
LVD+ + G +E + + K W ++L A H + + F +M+ +EL+
Sbjct: 645 -LVDMYAKCGMIESSEKCFIEISNKYIVS-WNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 675 PHNASNYITLSNMHAEAGRWEEVERL 700
P + S ++++ + AG EE +R+
Sbjct: 703 PDSVS-FLSVLSACRHAGLVEEGKRI 727
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 188/699 (26%), Positives = 326/699 (46%), Gaps = 114/699 (16%)
Query: 141 RKGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNS 197
R L++ R++L LV E +++ + + G +A +VF + K V Y++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 198 MLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
ML G+ + + AL FF +M E V ++ ++ + +L +++
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI-------- 157
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
HG + ++ D + + + YA+ Q++EA K+F ++P
Sbjct: 158 -------------HGLLVKSGFSLD------LFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD--------------------------- 346
+D VSW+TI+ GY + G A E+ M C++
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 347 -------------IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
+ TAL+ + G ++ A ++F+ + R+ + WNSMI + Q+
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 394 MDEALDLFRQM------PKKNSV---------------------------------SWNT 414
EA+ +F++M P SV N+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+IS Y + ++D+A ++F ++ R +VSWN++I GF QN DAL M KPD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
T+ +H +++S ++FV+ AL+ MYAKCG + A +F
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD 497
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ + +WN++I GY +G+ A + F++M + P+ VTF+ ++SACSH+GL
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEA 557
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL F M E+++IE +HY +VDLLGR GRL EA++ + M VK ++G++LGAC
Sbjct: 558 GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
++HKN+ E AA RL EL P + ++ L+N++ A WE+V ++RV M + K PG
Sbjct: 618 QIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG 677
Query: 715 CSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRD 753
CS +E++N++ F S + + I L + I++
Sbjct: 678 CSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 254/543 (46%), Gaps = 79/543 (14%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
VF N +++ ++S+F + G + +A ++F+ + + V ++TM+ G+ S +++A
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 118 SKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVI 168
+ F DV P NF++ L + + +L +E+ L+ L+ +
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVC--GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWN 227
YAK Q ++A KVF+ MP +DLVS+N+++AGY+QNG +AL + M E+N+ S+
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 228 LMVSGFVNSGDLS-----------SARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+VS L + R F+ + N + + V M +A+ G + AR+L
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI-STALVDM---YAKCGSLETARQL 293
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI-----INGYIRVGK 331
FD M +NVVSWN+MI AY Q+ EA+ +F K+ +GV + + ++ +G
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGD 352
Query: 332 LDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
L+ R ++ ++++ +L+S + VD A+ MF +L +R + WN+MI G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 388 FCQSGRMDEALDLFRQMPK---------------------------------------KN 408
F Q+GR +AL+ F QM KN
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
++ YA+ G + A IF M ER++ +WN++I G+ + AL+ M +
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN--ALIAMYAKCGRV 526
KP+ TF + G + Y++K Y +L + + A++ + + GR+
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 527 ESA 529
A
Sbjct: 592 NEA 594
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 209/490 (42%), Gaps = 103/490 (21%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL--VSWNTM- 104
+ G V+EA RVF K V Y++M+ FAK + A Q F +M ++ V +N
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 105 ----------------IAGYLHNS--------------------MVEEASKLFDVMPERD 128
I G L S V EA K+FD MPERD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIA------------------- 169
SW ++ Y++ G AR LE+V E S I
Sbjct: 201 LVSWNTIVAGYSQNG---MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 170 ----------------------GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
YAK G A ++F+ M +++VS+NSM+ Y QN
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNS----GDLSSAR---QLFEKIPNPNAVSWV-T 259
A+ F+KM ++ V ++ V G +++ GDL R +L ++ VS V +
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----D 315
++ + + ++ A +F + + +VSWNAMI +AQ+ + +A+ F ++ + D
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQM--PC--KDIAAETALMSGLIQTGRVDEASKMFN 371
++ ++I + A+ ++ + C K++ TAL+ + G + A +F+
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD 497
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDS 427
+S R WN+MI G+ G AL+LF +M K N V++ ++IS + +G +++
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEA 557
Query: 428 AENIFQAMEE 437
F M+E
Sbjct: 558 GLKCFYMMKE 567
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 57/376 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
+++ ++AK G + ARQLFD M +RN+VSWN+MI Y+ N +EA +F M +
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 128 -DNFSWALMITCYTRKGKLEKAREL----LELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
+ S + G LE+ R + +EL D+ S NS+I+ Y K + A
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV-NSLISMYCKCKEVDTAAS 393
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM-VSGFVNSGDLSS 241
+F + + LVS+N+M+ G+ QNG+ AL++F +M + V VS +LS
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 242 ARQ-------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
+ + N ++ +A+ G I AR +FD M ++V +WNAMI
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 295 YAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
Y A++LF ++ +GV++ ++I+ C
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA------------------CSH---- 551
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMP 405
SGL++ G K F + +I + +M+ ++GR++EA D QMP
Sbjct: 552 ----SGLVEAGL-----KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 406 KKNSVSWNTMISGYAQ 421
K +V+ + G Q
Sbjct: 603 VKPAVNVYGAMLGACQ 618
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ +N+ NS+IS++ K ++ A +F K+ R LVSWN MI G+ N +A F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK-LESACW--NSVIAGYAKKG 175
M R D F++ +IT A+ + +V L+ + +++ YAK G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVS 231
A +F++M + + ++N+M+ GY +G AL FE+M + N V++ ++S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 232 GFVNSGDLSSARQLFEKIPNPNAVS-----WVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+SG + + + F + ++ + M+ R G++ EA MP K V
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 287 S-WNAMIAA 294
+ + AM+ A
Sbjct: 608 NVYGAMLGA 616
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V + + KN+ +++ ++AK G I AR +FD MS+R++ +WN MI GY + + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 118 SKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD----KLESACWNSVIA 169
+LF+ M + + ++ +I+ + G +E + ++ + +L + +++
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
+ G+ ++A MPVK V+ + G Q K ++F EK AE+
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK---NVNFAEKAAER 632
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 275/526 (52%), Gaps = 56/526 (10%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTII 323
G IT AR++FD +P + WNA+I Y+++ +A+ ++ + D ++ ++
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFN--QLSTRD 377
+ L R V+ Q+ A+ + +GLI + R+ A +F L R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNS---------------------------- 409
+ W ++++ + Q+G EAL++F QM K +
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 410 --------------VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
+S NTM YA+ GQ+ +A+ +F M+ N++ WN++I+G+ +N
Sbjct: 247 SVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A+ M + +PD + + ++EY+ +S Y +D+F+S+A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
LI M+AKCG VE A VF D++ W+++I GY L+G A EA ++ M V P+
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VTF+G+L AC+H+G+ +G F M D I P +HY+C++DLLGR G L++A+ V+
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M V+ +WG+LL AC+ H+++E+GE+AA +L ++P N +Y+ LSN++A A W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQ 741
V +RV M++K K GCSW+EV+ +++ F D R E I+
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIE 588
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 207/428 (48%), Gaps = 37/428 (8%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
H +L ++ + V L+T +I + G I+ ARQ+FD + + + WN +
Sbjct: 33 HKAQLKQIHARLLVLGLQFSGFLIT--KLIHASSSFGDITFARQVFDDLPRPQIFPWNAI 90
Query: 105 IAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR----ELLELVP 156
I GY N+ ++A ++ M D+F++ ++ + L+ R ++ L
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV--KDLVSYNSMLAGYTQNGKMGLALHF 214
D + N +IA YAK + A VF +P+ + +VS+ ++++ Y QNG+ AL
Sbjct: 151 DA-DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 215 FEKMAEKNV-VSWNLMVS---GFVNSGDLSSARQLFEKIPN------PNAVSWVTMLCGF 264
F +M + +V W +VS F DL R + + P+ + +++ +
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL--ISLNTMY 267
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWS 320
A+ G++ A+ LFD M N++ WNAMI+ YA++ EA+ +F ++ +K D +S +
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTR 376
+ I+ +VG L++AR +Y + D + + S LI + G V+ A +F++ R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIF 432
D + W++MI G+ GR EA+ L+R M + N V++ ++ +G + F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 433 QAMEERNI 440
M + I
Sbjct: 448 NRMADHKI 455
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+I + G + A +F + I WN++I G+ +N+ + DAL M PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
TF Q+G +H + + G+ D+FV N LIA+YAKC R+ SA VF
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 535 AIECVD--LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
+ + ++SW +++S YA NG +EA + F QM +V PD V + +L+A +
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 593 NQGLDLFKCMVE-DFAIEP 610
QG + +V+ IEP
Sbjct: 239 KQGRSIHASVVKMGLEIEP 257
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 185/408 (45%), Gaps = 58/408 (14%)
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
D+F +A +I T K +L++ L ++ + +I + G + A +VF+ +
Sbjct: 21 DSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSAR 243
P + +N+++ GY++N AL + M V ++ ++ L R
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 244 ----QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC--KNVVSWNAMIAAYAQ 297
Q+F + + ++ +A+ ++ AR +F+ +P + +VSW A+++AYAQ
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 298 DLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
+ + EA+++F ++ D V+ +++N + + L + R ++ + + E L
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 354 MSGL----IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-- 407
+ L + G+V A +F+++ + + I WN+MI+G+ ++G EA+D+F +M K
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 408 --NSVSWNTMISGYAQAGQMDSAEN----------------------------------- 430
+++S + IS AQ G ++ A +
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+F +R++V W+++I G+ + +A+ M R G P+ TF
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 32/327 (9%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----- 121
L++ N+M +AK G+++ A+ LFDKM NL+ WN MI+GY N EA +F
Sbjct: 260 LISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 122 -DVMPERDNFSWALMITCYTRKGKLEKARELLELV--PDKLESACWNS-VIAGYAKKGQF 177
DV P D S I+ + G LE+AR + E V D + +S +I +AK G
Sbjct: 317 KDVRP--DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV--- 234
A VF+ +D+V +++M+ GY +G+ A+ + M V ++ G +
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 235 -NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSW 288
+SG + F ++ NP + ++ R G + +A + MP + V W
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 289 NAMIAAYAQDLQID----EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP- 343
A+++A + ++ A +LF P G + + N Y D EV +M
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTG-HYVQLSNLYAAARLWDRVAEVRVRMKE 553
Query: 344 ---CKDIAAETALMSGLIQTGRVDEAS 367
KD+ + G ++ RV + S
Sbjct: 554 KGLNKDVGCSWVEVRGRLEAFRVGDKS 580
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 158/365 (43%), Gaps = 33/365 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
K G+V A +F NL+ +N+MIS +AKNG +A +F +M +++ +S
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLELVPDK 158
+ I+ +E+A +++ + D F + +I + + G +E AR + + D+
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHF 214
+ W+++I GY G+ +A ++ M + V++ +L +G + F
Sbjct: 388 -DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 215 FEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTML--CGFARH 267
F +MA+ + + ++ +G L A ++ + +P P W +L C RH
Sbjct: 447 FNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 268 GKITE--ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD-----GVSWS 320
++ E A++LF P N + + YA D ++ +++ K G SW
Sbjct: 507 VELGEYAAQQLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Query: 321 TIINGY--IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT 378
+ RVG D++ Y ++ + E+ L G + D + N +T
Sbjct: 566 EVRGRLEAFRVG--DKSHPRYEEIERQVEWIESRLKEGGFVANK-DASLHDLNDEEAEET 622
Query: 379 ICWNS 383
+C +S
Sbjct: 623 LCSHS 627
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 96/238 (40%), Gaps = 44/238 (18%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
Q+H +L G F+ LI + G + A QVF + + WN++I GY+ N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS-----------HAGLANQGLD------- 597
+ +A + M V PD TF +L ACS HA + G D
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 598 -----LFKC-----MVEDFAIEPLAEH----YSCLVDLLGRMGRLEEA---FNVVRGMDV 640
KC F PL E ++ +V + G EA F+ +R MDV
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 641 KANAGLWGSLLGACRVHKNLEIGE-----FAAMRLSELEPHNASNYITLSNMHAEAGR 693
K + S+L A ++L+ G M L E+EP I+L+ M+A+ G+
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL-EIEP---DLLISLNTMYAKCGQ 272
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 211/780 (27%), Positives = 370/780 (47%), Gaps = 94/780 (12%)
Query: 62 TIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
T+ + S +S ++G ARQLFD + + V WNT+I G++ N++ EA +
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL------------ESACWNSVIA 169
M + F+ YT L+ E L K NS++
Sbjct: 94 SRMKKTAPFTNC---DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 170 GYAKKGQFSD------AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
Y D KVF+ M K++V++N++++ Y + G+ A F M V
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 224 ----VSWNLMVSGFVNSGDLSSARQLF--------EKIPNPNAVSWVTMLCGFARHGKIT 271
VS+ + S + A + E + + VS + + +A G I
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVS--SAISMYAELGDIE 268
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI-----KLPHKDGVSWSTIINGY 326
+RR+FDS +N+ WN MI Y Q+ + E+++LF+ K D V++ +
Sbjct: 269 SSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAV 328
Query: 327 IRVGKLDEAREV-------YNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+ +++ R+ + ++P I +LM + G V ++ +F + RD +
Sbjct: 329 SALQQVELGRQFHGFVSKNFRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISG----------------- 418
WN+MI+ F Q+G DE L L +M K+ + ++ ++S
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 419 -----------------YAQAGQMDSAENIFQA--MEERNIVSWNSLITGFLQNSLYFDA 459
Y+++G + ++ +F+ ER+ +WNS+I+G+ QN
Sbjct: 446 IRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
M + +P+ T +G QLH + ++ ++FV++AL+ M
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDM 565
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y+K G ++ AE +F+ + + +++ ++I GY +G A F M + PD +TF
Sbjct: 566 YSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITF 625
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +LSACS++GL ++GL +F+ M E + I+P +EHY C+ D+LGR+GR+ EA+ V+G+
Sbjct: 626 VAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLG 685
Query: 640 VKAN-AGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-HNASNY-ITLSNMHAEAGRWEE 696
+ N A LWGSLLG+C++H LE+ E + RL++ + N S Y + LSNM+AE +W+
Sbjct: 686 EEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKS 745
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR-DKF 755
V+++R MR+K K G S IE+ + CF+S D I ++ G++ D+R D F
Sbjct: 746 VDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSF 805
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 200/456 (43%), Gaps = 78/456 (17%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ--------------------- 95
+VF N KN+V +N++IS + K G+ ++A + F M +
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 96 --------------------RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALM 135
++L ++ I+ Y +E + ++FD ER+ W M
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 136 ITCYTRKGKLEKARELL-------ELVPDKLESACWNSVIAGYAK---KGQFSD-AEKVF 184
I Y + L ++ EL E+V D++ S ++ + QF K F
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG-DLSSAR 243
+P+ V NS++ Y++ G + + F M E++VVSWN M+S FV +G D
Sbjct: 349 RELPI---VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 244 QLFEKIPNPNAVSWVTMLCGFARH--------GKITEARRLFDSMPCKNVVSWNAMIAAY 295
++E + ++T+ + GK T A + + + + S+ +I Y
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMY 463
Query: 296 AQDLQIDEAVKLF--IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
++ I + KLF +D +W+++I+GY + G ++ V+ +M ++I
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 354 MSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAG-----FCQSGRMDEALDLFRQM 404
++ ++ Q G VD K + S R + N +A + ++G + A D+F Q
Sbjct: 524 VASILPACSQIGSVD-LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
++NSV++ TMI GY Q G + A ++F +M+E I
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 204/439 (46%), Gaps = 56/439 (12%)
Query: 26 LTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISD 85
L +G K +F + I +LG +E + RVF + + +N+ +N+MI V+ +N + +
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 86 ARQLF-DKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGK 144
+ +LF + + + +VS D ++ L + + +
Sbjct: 301 SIELFLEAIGSKEIVS---------------------------DEVTYLLAASAVSALQQ 333
Query: 145 LEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
+E R+ V +L NS++ Y++ G + VF M +D+VS+N+M++
Sbjct: 334 VELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISA 393
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS---------GDLSSARQLFEKIPNP 252
+ QNG L +M ++ + V+ +++ G + A + + I
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE 453
Query: 253 NAVSWVTMLCGFARHGKITEARRLFD--SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
S++ + +++ G I +++LF+ ++ +WN+MI+ Y Q+ ++ +F K
Sbjct: 454 GMNSYLIDM--YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRK 511
Query: 311 LPHK----DGVSWSTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGR 362
+ + + V+ ++I+ ++G +D ++++ Q +++ +AL+ + G
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISG 418
+ A MF+Q R+++ + +MI G+ Q G + A+ LF M K +++++ ++S
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 419 YAQAGQMDSAENIFQAMEE 437
+ +G +D IF+ M E
Sbjct: 632 CSYSGLIDEGLKIFEEMRE 650
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 277/543 (51%), Gaps = 58/543 (10%)
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGV 317
CG R G+I+ AR++FD +P + V +N+MI Y++ DE ++L+ ++ D
Sbjct: 60 CG--RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSS 117
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCK--------DIAAETALMSGLIQTGRVDEASKM 369
+++ I + L++ V+ CK D+ +++++ ++ G++DEA +
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVW----CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVL 173
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK---------------------- 407
F +++ RD ICW +M+ GF Q+G+ +A++ +R+M +
Sbjct: 174 FGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT 233
Query: 408 -----------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
N V +++ YA+ G ++ A +F M + VSW SLI+GF
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
QN L A +++V M G +PD T + G +H YILK ++ D
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDR 352
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ AL+ MY+KCG + S+ ++F + DL+ WN++IS Y ++G E F +M
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
+ PD TF +LSA SH+GL QG F M+ + I+P +HY CL+DLL R GR+EE
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAE 690
A +++ + +W +LL C H+NL +G+ AA ++ +L P + +SN A
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFAT 532
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISAD 750
A +W+EV ++R LMR+ K+PG S IEV +++ FL +D + +L + +
Sbjct: 533 ANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTE 592
Query: 751 IRD 753
IRD
Sbjct: 593 IRD 595
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 188/389 (48%), Gaps = 26/389 (6%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERD 128
+I+ + G+IS AR++FD++ QR + +N+MI Y +E +L+D M + D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFN 185
+ ++ + I LEK + D K + +SV+ Y K G+ +AE +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN-SGDLSSARQ 244
M +D++ + +M+ G+ Q GK A+ F+ +M + +++ G + SGDL +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 245 -------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
L+ N V +++ +A+ G I A R+F M K VSW ++I+ +AQ
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 298 DLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK---DIAAE 350
+ ++A + +++ D V+ ++ +VG L R V+ + + D
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA 355
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-- 408
TALM + G + + ++F + +D +CWN+MI+ + G E + LF +M + N
Sbjct: 356 TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIE 415
Query: 409 --SVSWNTMISGYAQAGQMDSAENIFQAM 435
++ +++S + +G ++ ++ F M
Sbjct: 416 PDHATFASLLSALSHSGLVEQGQHWFSVM 444
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 166/374 (44%), Gaps = 59/374 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE---- 126
+S+++++ K GK+ +A LF KM++R+++ W TM+ G+ +A + + M
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 127 RDNFSWALMITCYTRKGKLEKAREL---LELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
RD ++ G + R + L + S++ YAK G A +V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-------KNVVSWNLMVSGFVNS 236
F+ M K VS+ S+++G+ QN GLA FE + E ++V+ ++
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQN---GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 237 GDLSSARQLFEKIPNPNAVSWVT---MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
G L + R + I + + VT ++ +++ G ++ +R +F+ + K++V WN MI+
Sbjct: 332 GSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
Y E V LF+K+ N P D A +L
Sbjct: 392 CYGIHGNGQEVVSLFLKMTES-------------------------NIEP--DHATFASL 424
Query: 354 MSGLIQTGRVDEASKMFN--------QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+S L +G V++ F+ Q S + +C ++A ++GR++EALD+
Sbjct: 425 LSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLA---RAGRVEEALDMINSEK 481
Query: 406 KKNSVS-WNTMISG 418
N++ W ++SG
Sbjct: 482 LDNALPIWVALLSG 495
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+I+ + G++ A +F + +R + +NS+I + + + L+ M E +PD
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
STF + G + + GY ND+FV ++++ +Y KCG+++ AE +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ D+I W ++++G+A G +++A + +++M +E D+V +G+L A G
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 595 GLDLFKCMVED-FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
G + + + + E + LVD+ ++G +E A V M K A WGSL+
Sbjct: 236 GRSVHGYLYRTGLPMNVVVE--TSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLI 290
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 195/450 (43%), Gaps = 64/450 (14%)
Query: 161 SACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-A 219
S+ +IA + G+ S A KVF+ +P + + YNSM+ Y++ L +++M A
Sbjct: 50 SSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIA 109
Query: 220 EK---NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITE 272
EK + ++ + + ++ L ++ K + + ++L + + GK+ E
Sbjct: 110 EKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDE 169
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIR 328
A LF M ++V+ W M+ +AQ + +AV+ + ++ + +D V ++
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 329 VGKLDEAREVY-----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+G R V+ +P ++ ET+L+ + G ++ AS++F+++ + + W S
Sbjct: 230 LGDTKMGRSVHGYLYRTGLP-MNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 384 MIAGFCQSGRMDEALDLFRQMPK------------------------------------- 406
+I+GF Q+G ++A + +M
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 407 -KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+ V+ ++ Y++ G + S+ IF+ + +++V WN++I+ + + + + +
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN---DLFVSNALIAMYAK 522
M +PD +TF + G ++ I +V LI + A+
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV--CLIDLLAR 466
Query: 523 CGRVESAEQVFTAIECVD--LISWNSLISG 550
GRVE A + + E +D L W +L+SG
Sbjct: 467 AGRVEEALDMINS-EKLDNALPIWVALLSG 495
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 123/249 (49%), Gaps = 24/249 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+V S++ ++AK G I A ++F +M + VSW ++I+G+ N + A+K F+ +
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL---ANKAFEAVV 307
Query: 126 ERDNFSW--------ALMITCYTRKGKLEKARELLELVPDK--LESACWNSVIAGYAKKG 175
E + + +++ C ++ G L+ R + + + L+ +++ Y+K G
Sbjct: 308 EMQSLGFQPDLVTLVGVLVAC-SQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCG 366
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVS 231
S + ++F + KDLV +N+M++ Y +G + F KM E N+ ++ ++S
Sbjct: 367 ALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLS 426
Query: 232 GFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+SG + + F + N P+ +V ++ AR G++ EA + +S N +
Sbjct: 427 ALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNAL 486
Query: 287 S-WNAMIAA 294
W A+++
Sbjct: 487 PIWVALLSG 495
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 24/241 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K+G +E A RVFS + K V++ S+IS FA+NG + A + +M Q +LV+
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER---DNFSWALMITCYTRKGKLEKARELLELVPDKL 159
++ ++ + + +R D + ++ Y++ G L +RE+ E V K
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRK- 381
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ CWN++I+ Y G + +F N+ P D ++ S+L+ + +G + H
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP--DHATFASLLSALSHSGLVEQGQH 439
Query: 214 FFEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLF--EKIPNPNAVSWVTMLCGFAR 266
+F M K + + ++ +G + A + EK+ N + WV +L G
Sbjct: 440 WFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPI-WVALLSGCIN 498
Query: 267 H 267
H
Sbjct: 499 H 499
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 495 NQLHEYILKSG-YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
Q+H +++ +G +N +S LIA + G + A +VF + + +NS+I Y+
Sbjct: 34 TQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
E + + QM++E++ PD TF + AC +GL + + C DF +
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKNLEIGEF 665
S +++L + G+++EA V+ G K + W +++ G + K+L+ EF
Sbjct: 153 VCSSVLNLYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 106/213 (49%), Gaps = 30/213 (14%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
VT +++ +++K G +S +R++F+ + +++LV WNTMI+ Y + +E LF M E
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 128 ----DNFSWALMITCYTRKGKLEKARELLELVPDKLE----SACWNSVIAGYAKKGQFSD 179
D+ ++A +++ + G +E+ + ++ +K + + +I A+ G+ +
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 180 A------EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL--MVS 231
A EK+ N +P+ + ++L+G + + + K+ + N S + +VS
Sbjct: 473 ALDMINSEKLDNALPI-----WVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 232 GFVNSG----DLSSARQL-----FEKIPNPNAV 255
F + +++ R+L EK+P +A+
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 181/656 (27%), Positives = 319/656 (48%), Gaps = 93/656 (14%)
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
+ D+ N +L Y + G +G A F++M +++ VSWN M+SG+ + G L A LF
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 249 I----PNPNAVSWVTMLCGFAR-----HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+ + + S+ +L G A G+ + C NV ++++ YA+
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC-NVYVGSSLVDMYAKCE 150
Query: 300 QIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-------------- 345
++++A + F ++ + VSW+ +I G+++V + A + M K
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 346 --------------------------DIAAETALMSGLIQTGRVDEASKMFNQLS-TRDT 378
+I A++S G V +A ++F+ L ++D
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPK-------------------------------- 406
I WNSMIAGF + + A +LF QM +
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 407 -------KNSVSWNTMISGYAQ--AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+ + + N +IS Y Q G M+ A ++F++++ ++++SWNS+ITGF Q L
Sbjct: 331 VIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSE 390
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
DA+K + K D F Q+G Q+H KSG++++ FV ++LI
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 518 AMYAKCGRVESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
MY+KCG +ESA + F I ++WN++I GYA +G + F QM ++ V D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF +L+ACSH GL +GL+L M + I+P EHY+ VDLLGR G + +A ++
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M + + + + LG CR +E+ A L E+EP + Y++LS+M+++ +WEE
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
++ +M+++ K+PG SWIE++NQ++ F ++D + I +++ ++ +++
Sbjct: 631 KASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 206/410 (50%), Gaps = 46/410 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ +S++ ++AK ++ DA + F ++S+ N VSWN +IAG++ ++ A L +M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 126 ER-----DNFSWALMIT-------CYTRKGKLEKARELLELVPDKLESACWNSVIAGYAK 173
+ D ++A ++T C K + ++L+L + C N++I+ YA
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLK---QVHAKVLKLGLQHEITIC-NAMISSYAD 250
Query: 174 KGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNL 228
G SDA++VF+ L KDL+S+NSM+AG++++ A F +M E ++ ++
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 229 MVSG--------FVNSGDLSSARQLFEKIPNP-NAVSWVTMLCGFARHGKITEARRLFDS 279
++S F S ++ E++ + NA+ ++M F G + +A LF+S
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNAL--ISMYIQFPT-GTMEDALSLFES 367
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEA 335
+ K+++SWN++I +AQ ++AVK F L D ++S ++ + L
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 336 REVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQ 390
++++ + ++S LI + G ++ A K F Q+S++ T+ WN+MI G+ Q
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 391 SGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAME 436
G +LDLF QM +N V++ +++ + G + + ME
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 219/504 (43%), Gaps = 77/504 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
++ N ++ + K G + A LFD+M +R+ VSWNTMI+GY +E+A LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 125 ---PERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFS 178
+ D +S++ ++ + + ++ LV + +S++ YAK +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL-----MVSGF 233
DA + F + + VS+N+++AG+ Q + A M K V+ + +++
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVT----MLCGFARHGKITEARRLFDSM-PCKNVVSW 288
+ + +Q+ K+ +T M+ +A G +++A+R+FD + K+++SW
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI- 347
N+MIA +++ + A +LFI++ W + Y G L +Q+ K +
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRH----WVE-TDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 348 ------------AAETALMSGLIQ--TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
+A AL+S IQ TG +++A +F L ++D I WNS+I GF Q G
Sbjct: 329 GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 394 MDEALDLFRQMPK---------------------------------------KNSVSWNT 414
++A+ F + N ++
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISS 448
Query: 415 MISGYAQAGQMDSAENIFQAMEERN-IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+I Y++ G ++SA FQ + ++ V+WN++I G+ Q+ L +L M + K
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQL 497
D TF Q G +L
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLEL 532
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
S D N ++ + + G + A LF +MPK++SVSWNTMISGY G+++ A +F
Sbjct: 31 SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
M+ R G D +F +
Sbjct: 91 CMK-------------------------------RSGSDVDGYSFSRLLKGIASVKRFDL 119
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
G Q+H ++K GY +++V ++L+ MYAKC RVE A + F I + +SWN+LI+G+
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 125/276 (45%), Gaps = 33/276 (11%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLG---KLGKVEEAVRVFSNTIHKNLV 68
GE H+I S+ H + I G + V + +I + G +E+A+ +F + K+L+
Sbjct: 317 GEEHQIFGKSL-HGMVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER- 127
++NS+I+ FA+ G DA + F + + + Y ++++ S L + +
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEI-----KVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 128 ------------DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKG 175
+ F + +I Y++ G +E AR+ + + K + WN++I GYA+ G
Sbjct: 430 IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Query: 176 QFSDAEKVFNLMP---VK-DLVSYNSMLAGYTQNGKMGLALHFFEKMA-----EKNVVSW 226
+ +F+ M VK D V++ ++L + G + L M + + +
Sbjct: 490 LGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY 549
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTML 261
V +G ++ A++L E +P NP+ + T L
Sbjct: 550 AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 585
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H Y +K G I+D++VSN ++ Y K G + A +F + D +SWN++ISGY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
+A+ F M D +F +L + + G + +++ E S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSS 141
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
LVD+ + R+E+AF + + + N+ W +L+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 265/518 (51%), Gaps = 45/518 (8%)
Query: 270 ITEARRLFDSMPCKN-VVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DGVSWST-- 321
I AR+LFD P ++ N+MI AY + Q ++ L+ L + D +++T
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 322 ---------------------------------IINGYIRVGKLDEAREVYNQMPCKDIA 348
+++ Y + GK+ AR +++MP +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 349 AETALMSGLIQTGRVDEASKMFNQLS-TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
+ TAL+SG I+ G +D ASK+F+Q+ +D + +N+M+ GF +SG M A LF +M K
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM- 466
++W TMI GY +D+A +F AM ERN+VSWN++I G+ QN + ++ M
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
PD T +G H ++ + + V A++ MY+KCG +
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
E A+++F + + SWN++I GYALNG A A F M+ EE PD++T + +++AC
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITAC 384
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+H GL +G F M E + EHY C+VDLLGR G L+EA +++ M + N +
Sbjct: 385 NHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
S L AC +K++E E + ELEP N NY+ L N++A RW++ ++ +MR
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
+A K GCS IE+ + F+S D+ +I ++L
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 200/406 (49%), Gaps = 30/406 (7%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN--LVSWNTMIAGYLHNSMVE 115
+ + I N+ + + + A I AR+LFD+ QR+ +S N+MI YL
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 116 EASKLF-DVMPER----DNFSWALMIT------CYTRKGKLEKARELLELVPDKLESACW 164
++ L+ D+ E DNF++ + C + +L D S
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST-- 117
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-KNV 223
V+ YAK G+ A F+ MP + VS+ ++++GY + G++ LA F++M K+V
Sbjct: 118 -GVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
V +N M+ GFV SGD++SAR+LF+++ + ++W TM+ G+ I AR+LFD+MP +
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLP-----HKDGVSWSTIINGYIRVGKLDEAR-- 336
N+VSWN MI Y Q+ Q E ++LF ++ D V+ +++ G L
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 337 --EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
V + K + TA++ + G +++A ++F+++ + WN+MI G+ +G
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 395 DEALDLFRQM---PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
ALDLF M K + ++ +I+ G ++ F M E
Sbjct: 357 RAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE 402
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 152/319 (47%), Gaps = 28/319 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ-RNLVSWNTMI 105
K GK+ A F H++ V++ ++IS + + G++ A +LFD+M +++V +N M+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWN 165
G++ + + A +LFD M + +W MI Y ++ AR+L + +P++ WN
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER-NLVSWN 242
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPV-----KDLVSYNSMLAGYTQNGKMGLA--LHFF--E 216
++I GY + Q + ++F M D V+ S+L + G + L H F
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
K +K V ++ + G++ A+++F+++P SW M+ G+A +G A L
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDL 362
Query: 277 FDSMPCK---NVVSWNAMIAAYAQDLQIDEAVKLF---------IKLPHKDGVSWSTIIN 324
F +M + + ++ A+I A ++E K F K+ H + +++
Sbjct: 363 FVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEH-----YGCMVD 417
Query: 325 GYIRVGKLDEAREVYNQMP 343
R G L EA ++ MP
Sbjct: 418 LLGRAGSLKEAEDLITNMP 436
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 22/290 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + A R+F HK ++T+ +MI + I AR+LFD M +RNLVSWNTMI G
Sbjct: 188 KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
Query: 108 YLHNSMVEEASKLFDVMP-----ERDNFSWALMITCYTRKGKLEKARELLELVP----DK 158
Y N +E +LF M + D+ + ++ + G L V DK
Sbjct: 248 YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK 307
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
C +++ Y+K G+ A+++F+ MP K + S+N+M+ GY NG AL F M
Sbjct: 308 KVKVC-TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 219 ---AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
+ + ++ +++ + G + R+ F + N + M+ R G +
Sbjct: 367 MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLK 426
Query: 272 EARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDG 316
EA L +MP + N + ++ ++A Q I+ A ++ K P DG
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDG 476
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 242/451 (53%), Gaps = 18/451 (3%)
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQ 372
VSW++ IN R G+L EA + ++ M + AL+SG G S+
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGD 93
Query: 373 L----------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQA 422
L + ++I + + GR +A +F M KNSV+WNTMI GY ++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
GQ+D+A +F M ER+++SW ++I GF++ +AL M G KPD
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
G +H Y+L + N++ VSN+LI +Y +CG VE A QVF +E ++
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SWNS+I G+A NG A E+ F++M + PD VTF G L+ACSH GL +GL F+ M
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH-KNLE 661
D+ I P EHY CLVDL R GRLE+A +V+ M +K N + GSLL AC H N+
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIV 393
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
+ E L++L + SNY+ LSNM+A G+WE ++R M+ K PG S IE+
Sbjct: 394 LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Query: 722 NQIQCFLSDDSGRLRPETIQIILIGISADIR 752
+ + F++ D+ + I+ +L IS+D+R
Sbjct: 454 DCMHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 133/260 (51%), Gaps = 18/260 (6%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
++I +++K G+ AR +FD M +N V+WNTMI GY+ + V+ A+K+FD MPERD S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 132 WALMITCYTRKGKLEKA----RELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
W MI + +KG E+A RE +++ K + + + G S V +
Sbjct: 174 WTAMINGFVKKGYQEEALLWFRE-MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 188 PVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD----L 239
+D + NS++ Y + G + A F M ++ VVSWN ++ GF +G+ L
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESL 292
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----WNAMIAA 294
R++ EK P+AV++ L + G + E R F M C +S + ++
Sbjct: 293 VYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDL 352
Query: 295 YAQDLQIDEAVKLFIKLPHK 314
Y++ ++++A+KL +P K
Sbjct: 353 YSRAGRLEDALKLVQSMPMK 372
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 99/425 (23%)
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
VS+ S + T+NG++ A F M E N +++ ++SG GD +S +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGD 93
Query: 249 IP---------NPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
+ + N V T + G +++ G+ +AR +FD M KN V+WN MI Y +
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 299 LQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALM 354
Q+D A K+F K+P +D +SW+ +ING+++ G +EA + +M D A A +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 355 SGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV 410
+ G + + + ++D NS+I +C+ G ++ A +F M K+ V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
SWN++I G+A G + F+ M+E+ G
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEK-------------------------------G 302
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
KPD TF + AL A + G VE
Sbjct: 303 FKPDAVTF----------------------------------TGALTAC-SHVGLVEEGL 327
Query: 531 QVFTAIECVDLIS-----WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+ F ++C IS + L+ Y+ G +A K + M + P++V +L+A
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAA 384
Query: 586 CSHAG 590
CS+ G
Sbjct: 385 CSNHG 389
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 150/331 (45%), Gaps = 35/331 (10%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ------ 95
L + G++ EA + FS+ + N +T+ I++ + G + + +
Sbjct: 46 LTRNGRLAEAAKEFSDMTLAGVEPNHITF---IALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 96 ---RNLVSWNTMIAG-YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL 151
RN V T I G Y ++A +FD M ++++ +W MI Y R G+++ A ++
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 152 LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGK 207
+ +P++ + W ++I G+ KKG +A F M + D V+ + L T G
Sbjct: 163 FDKMPER-DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 208 MGLAL----HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
+ L + + + NV N ++ + G + ARQ+F + VSW +++ G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS- 318
FA +G E+ F M K + V++ + A + ++E ++ F + +S
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
Query: 319 ----WSTIINGYIRVGKLDEAREVYNQMPCK 345
+ +++ Y R G+L++A ++ MP K
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V S N+ NS+I ++ + G + ARQ+F M +R +VSWN++I G+ N E+
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLEL------VPDKLESACWNSV 167
F M E+ D ++ +T + G +E+ ++ + ++E + +
Sbjct: 292 LVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEH--YGCL 349
Query: 168 IAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNG-KMGLALHFFEKMAEKNVVS 225
+ Y++ G+ DA K+ MP+K + V S+LA + +G + LA + + + NV S
Sbjct: 350 VDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKS 409
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 25/312 (8%)
Query: 23 KHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGK 82
K +L + K+ N I + G+V+ A ++F ++L+++ +MI+ F K G
Sbjct: 127 KARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGY 186
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL-------- 134
+A F +M + I L N+ + F + R S
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAAL-NACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 135 -MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK--- 190
+I Y R G +E AR++ + +K WNSVI G+A G ++ F M K
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNM-EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 191 -DLVSYNSMLAGYTQNGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQ 244
D V++ L + G + L +F+ M + + +V + +G L A +
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 245 LFEKIP-NPNAVSWVTMLCGFARHG-KITEARRLFDSMPCKNVVSWNAMIA---AYAQDL 299
L + +P PN V ++L + HG I A RL + NV S + + YA D
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADG 424
Query: 300 QIDEAVKLFIKL 311
+ + A K+ K+
Sbjct: 425 KWEGASKMRRKM 436
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 282 bits (722), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/608 (27%), Positives = 307/608 (50%), Gaps = 55/608 (9%)
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+++ Y G DA VF+ +P D + ML Y N + + ++ + +
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYD 141
Query: 227 NLMVSGFVNSG----DLSSARQL---FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
+++ S + + DL + +++ K+P+ + V +L +A+ G+I A ++F+
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFND 201
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV----SWSTIINGYIRVGKLDEA 335
+ +NVV W +MIA Y ++ +E + LF ++ + + ++ T+I ++ L +
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG 261
Query: 336 REVYNQMPCKDIAAETALMSGL----IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+ + + I + L++ L ++ G + A ++FN+ S D + W +MI G+ +
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 392 GRMDEALDLFRQMP----KKNSVSWNTMISG----------------------------- 418
G ++EAL LF++M K N V+ +++SG
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN 381
Query: 419 -----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
YA+ Q A+ +F+ E++IV+WNS+I+GF QN +AL M E P
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI--NDLFVSNALIAMYAKCGRVESAEQ 531
+ T VG+ LH Y +K G++ + + V AL+ YAKCG +SA
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
+F IE + I+W+++I GY G I + + F++ML ++ P++ TF +LSAC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
N+G F M +D+ P +HY+C+VD+L R G LE+A +++ M ++ + +G+ L
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
C +H ++GE ++ +L P +AS Y+ +SN++A GRW + + +R LM+ + K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 712 LPGCSWIE 719
+ G S +E
Sbjct: 682 IAGHSTME 689
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/577 (22%), Positives = 253/577 (43%), Gaps = 68/577 (11%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----D 128
++S++ G DAR +FD++ + + W M+ Y N E KL+D++ + D
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYD 141
Query: 129 NFSWALMITCYTRKGKLEKAREL---LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN 185
+ ++ + T L+ +++ L VP ++ ++ YAK G+ A KVFN
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-GDLSSARQ 244
+ ++++V + SM+AGY +N L F +M E NV+ + + LS+ Q
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 245 -------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
L + ++ ++L + + G I+ ARR+F+ ++V W AMI Y
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 298 DLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYN---QMPCKDIAAE 350
+ ++EA+ LF K+ + V+ +++++G + L+ R V+ ++ D
Sbjct: 321 NGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA 380
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK--- 407
AL+ + + +A +F S +D + WNS+I+GF Q+G + EAL LF +M +
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 408 -NSVSWNTMISG-------------------------------------YAQAGQMDSAE 429
N V+ ++ S YA+ G SA
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
IF +EE+N ++W+++I G+ + +L+ M ++ +KP++STF
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 490 XXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSL 547
G + + K + ++ M A+ G +E A + + D+ + +
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+ G ++ K+ML ++ PD ++ ++S
Sbjct: 621 LHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 655
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 202/398 (50%), Gaps = 32/398 (8%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
V ++ ++AK G+I A ++F+ ++ RN+V W +MIAGY+ N + EE LF+ M E
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 128 ----DNFSWALMITCYTRKGKLEKARELLE-LVPDKLE-SACW-NSVIAGYAKKGQFSDA 180
+ +++ +I T+ L + + LV +E S+C S++ Y K G S+A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNS 236
+VFN DLV + +M+ GYT NG + AL F+KM + N V+ ++SG
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 237 GDLSSARQLFE-----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
+L R + I + N + + + +A+ + +A+ +F+ K++V+WN++
Sbjct: 357 ENLELGRSVHGLSIKVGIWDTNVANALVHM--YAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 292 IAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQ------ 341
I+ ++Q+ I EA+ LF ++ + +GV+ +++ + +G L ++
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ + TAL+ + G A +F+ + ++TI W++MI G+ + G +L+LF
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 402 RQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
+M KK N ++ +++S G ++ + F +M
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 174/409 (42%), Gaps = 78/409 (19%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + A RVF+ H +LV + +MI + NG +++A LF KM + IA
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL--LELVPDKLESACWN 165
L + E LE R + L + ++ N
Sbjct: 349 VLSGCGLIE---------------------------NLELGRSVHGLSIKVGIWDTNVAN 381
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS 225
+++ YAK Q DA+ VF + KD+V++NS+++G++QNG + AL F +M ++V
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 226 WNLMVSGFVNS----GDLSSARQLFEK------IPNPNAVSWVTMLCGFARHGKITEARR 275
+ V+ ++ G L+ L + + + +L +A+ G AR
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEA 335
+FD++ KN ++W+AMI Y + +++LF ++ K
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK--------------------- 540
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL--------STRDTICWNSMIAG 387
Q P + + T+++S TG V+E K F+ + ST+ C M+A
Sbjct: 541 ----QQKP--NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA- 593
Query: 388 FCQSGRMDEALDLFRQMPKKNSV-SWNTMISGYAQAGQMDSAENIFQAM 435
++G +++ALD+ +MP + V + + G + D E + + M
Sbjct: 594 --RAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM 640
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
K G + A +F KN +T+++MI + K G + +LF++M ++ N ++
Sbjct: 491 AKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 550
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPD 157
++++ H MV E K F M + NF+ + M+ R G+LE+A +++E +P
Sbjct: 551 SILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI 610
Query: 158 KLESACWNSVIAGYAKKGQFSDAE----KVFNLMPVKDLVSYNSMLAG-YTQNGK 207
+ + C+ + + G +F E K+ +L P D SY +++ Y +G+
Sbjct: 611 QPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP--DDASYYVLVSNLYASDGR 663
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 86/210 (40%), Gaps = 12/210 (5%)
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN-----QLHEYILK 503
GF + F +K L+L ++ D S+ + N Q H +
Sbjct: 14 GFPPRCVSFTTIKELILT----EENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTG 69
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
+G + D+ ++ L+++Y G + A VF I D W ++ Y LN ++E K
Sbjct: 70 NGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL 129
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
+ ++ D + F L AC+ + G + +V+ + + + + L+D+
Sbjct: 130 YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVV--LTGLLDMYA 187
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ G ++ A V + ++ N W S++
Sbjct: 188 KCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 287/560 (51%), Gaps = 25/560 (4%)
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVN-SGDLSSAR---QLFEKIPNPNAVSWVTML 261
G + A F K+ E +VV WN M+ G+ D R + ++ P++ ++ +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 262 CGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG 316
G R G + K N+ NA++ Y+ +D A +F + +D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTG-----------RVDE 365
SW+ +I+GY R+ + +E+ E+ +M +++ + T++ L+ + RV E
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 366 -ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQ 424
S+ + S R N+++ + G MD A+ +FR M ++ +SW +++ GY + G
Sbjct: 261 YVSECKTEPSLRLE---NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
+ A F M R+ +SW +I G+L+ + ++L+ M G PD+ T
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
++G + YI K+ ND+ V NALI MY KCG E A++VF ++ D +W
Sbjct: 378 CAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTW 437
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+++ G A NG EA K F QM + PD +T++G+LSAC+H+G+ +Q F M
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS 497
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
D IEP HY C+VD+LGR G ++EA+ ++R M + N+ +WG+LLGA R+H + + E
Sbjct: 498 DHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAE 557
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQI 724
AA ++ ELEP N + Y L N++A RW+++ +R + D K PG S IEV
Sbjct: 558 LAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFA 617
Query: 725 QCFLSDDSGRLRPETIQIIL 744
F++ D L+ E I + L
Sbjct: 618 HEFVAGDKSHLQSEEIYMKL 637
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 201/430 (46%), Gaps = 38/430 (8%)
Query: 54 EAVRVFSNTIHKNLVTYNSMISVFAKNGKISDA------RQLFDKMSQ----RNLVSWNT 103
E VR++ N + K VT +S F NG D ++L + + NL N
Sbjct: 117 EGVRLYLNML-KEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNA 175
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC 163
++ Y +++ A +FD + D FSW LMI+ Y R + E++ ELL + L S
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 164 WNSVIAGYAKKGQFSDA-------EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+++ + + D E V L N+++ Y G+M +A+ F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
M ++V+SW +V G+V G+L AR F+++P + +SW M+ G+ R G E+ +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 277 FDSMPCKNVV----SWNAMIAAYAQ--DLQIDEAVKLFI---KLPHKDGVSWSTIINGYI 327
F M ++ + +++ A A L+I E +K +I K+ + D V + +I+ Y
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN-DVVVGNALIDMYF 414
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICWNS 383
+ G ++A++V++ M +D TA++ GL G+ EA K+F Q+ D I +
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 384 MIAGFCQSGRMDEALDLFRQMPKKNS-----VSWNTMISGYAQAGQMDSAENIFQAME-E 437
+++ SG +D+A F +M + V + M+ +AG + A I + M
Sbjct: 475 VLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 438 RNIVSWNSLI 447
N + W +L+
Sbjct: 535 PNSIVWGALL 544
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/527 (22%), Positives = 228/527 (43%), Gaps = 55/527 (10%)
Query: 81 GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWAL 134
G +S A +LF K+ + ++V WN MI G+ E +L+ V P D+ ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTP--DSHTFPF 139
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
++ R G AC + K G S +L
Sbjct: 140 LLNGLKRDGG---------------ALACGKKLHCHVVKFGLGS------------NLYV 172
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF----EKIP 250
N+++ Y+ G M +A F++ +++V SWNLM+SG+ + + +L +
Sbjct: 173 QNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLV 232
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMP-CKNVVSW---NAMIAAYAQDLQIDEAVK 306
+P +V+ + +L ++ +R+ + + CK S NA++ AYA ++D AV+
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEA 366
+F + +D +SW++I+ GY+ G L AR ++QMP +D + T ++ G ++ G +E+
Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNES 352
Query: 367 SKMFNQLST----RDTICWNSMIAGFCQSGRMD--EALDLF--RQMPKKNSVSWNTMISG 418
++F ++ + D S++ G ++ E + + + K + V N +I
Sbjct: 353 LEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM 412
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + G + A+ +F M++R+ +W +++ G N +A+K M +PD T+
Sbjct: 413 YFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS-NALIAMYAKCGRVESAEQVFTAIE 537
+ + I V ++ M + G V+ A ++ +
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 538 C-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
+ I W +L+ L+ A A K++L E+ PD +L
Sbjct: 533 MNPNSIVWGALLGASRLHNDEPMAELAAKKIL--ELEPDNGAVYALL 577
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 24/315 (7%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G+++ AVR+F + ++++++ S++ + + G + AR FD+M R+ +SW MI GYL
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 110 HNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLESA 162
E+ ++F M D F+ ++T G LE + + K +
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
N++I Y K G A+KVF+ M +D ++ +M+ G NG+ A+ F +M + +
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 223 V----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEA 273
+ +++ ++S +SG + AR+ F K+ + P+ V + M+ R G + EA
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 274 RRLFDSMPC-KNVVSWNAMIAAYAQDLQIDE-----AVKLFIKLPHKDGVSWSTIINGYI 327
+ MP N + W A++ A L DE A K ++L +G ++ + N Y
Sbjct: 525 YEILRKMPMNPNSIVWGALLG--ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 328 RVGKLDEAREVYNQM 342
+ + REV ++
Sbjct: 583 GCKRWKDLREVRRKI 597
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 302/666 (45%), Gaps = 125/666 (18%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N ++ +K G+ +A ++F+ MP +D ++N+M+ Y+ + ++ A F KN +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLCG--------------- 263
SWN ++SG+ SG A LF ++ PN + V +C
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 264 ------------------FARHGKITEARRLFDSMPC-KNVVSWNAMIAAYAQDLQIDEA 304
+A+ +I+EA LF++M KN V+W +M+ Y+Q+ +A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC--------KDIAAETALMSG 356
++ F L + S + A V Q+ C +I ++AL+
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDM 271
Query: 357 LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-------- 408
+ ++ A + + D + WNSMI G + G + EAL +F +M +++
Sbjct: 272 YAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTI 331
Query: 409 --------------------------------SVSWNTMISGYAQAGQMDSAENIFQAME 436
+ N ++ YA+ G MDSA +F+ M
Sbjct: 332 PSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMI 391
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
E++++SW +L+TG N Y +ALK M G PD+ + G Q
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQ 451
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H +KSG+ + L V+N+L+ MY KCG +E A +F ++E DLI+W LI GYA NG
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGL 511
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
+A + F M + + I P EHY+
Sbjct: 512 LEDAQRYFDSMRTV-----------------------------------YGITPGPEHYA 536
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPH 676
C++DL GR G + ++ M+V+ +A +W ++L A R H N+E GE AA L ELEP+
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPN 596
Query: 677 NASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLR 736
NA Y+ LSNM++ AGR +E +R LM+ + K PGCSW+E + ++ F+S+D R
Sbjct: 597 NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSED--RRH 654
Query: 737 PETIQI 742
P ++I
Sbjct: 655 PRMVEI 660
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 231/517 (44%), Gaps = 113/517 (21%)
Query: 56 VRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
++ F + IH + + N ++ +K+G++ +ARQ+FDKM +R+ +WNTMI Y ++
Sbjct: 13 LKPFGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNS 72
Query: 112 SMVEEASKLFDVMPERDNFSWALMITCYTRKG-KLEKARELLELVPD------------- 157
+ +A KLF P ++ SW +I+ Y + G K+E E+ D
Sbjct: 73 RRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVL 132
Query: 158 ------------------------KLESACWNSVIAGYAKKGQFSDAEKVFNLMP-VKDL 192
L+ N ++A YA+ + S+AE +F M K+
Sbjct: 133 RMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNN 192
Query: 193 VSYNSMLAGYTQNG-------------------------------------KMGLALH-- 213
V++ SML GY+QNG ++G+ +H
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEA 273
+ + N+ + ++ + ++ SAR L E + + VSW +M+ G R G I EA
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 274 RRLFDSMPCKNV----VSWNAMIAAYA---QDLQIDEAVKLFIKLPHKDGVSWSTIING- 325
+F M +++ + +++ +A +++I + I K G + ++N
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV---KTGYATYKLVNNA 369
Query: 326 ----YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRD 377
Y + G +D A +V+ M KD+ + TAL++G G DEA K+F + T D
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 378 TICWNSMIAG-----FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
I S+++ + G+ + P SV+ N++++ Y + G ++ A IF
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN-NSLVTMYTKCGSLEDANVIF 488
Query: 433 QAMEERNIVSWNSLITGFLQNSL------YFDALKSL 463
+ME R++++W LI G+ +N L YFD+++++
Sbjct: 489 NSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTV 525
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 59 FSNTIHKN---------LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
F +H N L NS+++++ K G + DA +F+ M R+L++W +I GY
Sbjct: 448 FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 110 HNSMVEEASKLFDVM---------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLE 160
N ++E+A + FD M PE +A MI + R G K +LL + + +
Sbjct: 508 KNGLLEDAQRYFDSMRTVYGITPGPEH----YACMIDLFGRSGDFVKVEQLLHQMEVEPD 563
Query: 161 SACWNSVIAGYAKKGQFSDAEK----VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+ W +++A K G + E+ + L P + V Y + Y+ G+ A +
Sbjct: 564 ATVWKAILAASRKHGNIENGERAAKTLMELEP-NNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 217 KMAEKNV 223
M +N+
Sbjct: 623 LMKSRNI 629
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 130/344 (37%), Gaps = 64/344 (18%)
Query: 16 KIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMIS 75
++K+ S H L + + + N + K G ++ A++VF I K+++++ ++++
Sbjct: 344 EMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVT 403
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS---MVEEASKLFDVMPERDNFSW 132
NG +A +LF M + + A L S + E + + F
Sbjct: 404 GNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS 463
Query: 133 AL-----MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
+L ++T YT+ G LE A + + + + W +I GYAK G DA++ F+ M
Sbjct: 464 SLSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
+ G T + + M+ F SGD QL
Sbjct: 523 RT---------VYGITPGPE-----------------HYACMIDLFGRSGDFVKVEQLLH 556
Query: 248 KIP-NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
++ P+A W +L +HG I R A K
Sbjct: 557 QMEVEPDATVWKAILAASRKHGNIENGER----------------------------AAK 588
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
++L + V + + N Y G+ DEA V M ++I+ E
Sbjct: 589 TLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE 632
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/628 (28%), Positives = 311/628 (49%), Gaps = 70/628 (11%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N ++ Y K G DA +F+ MP ++ VS+ ++ GY +GL + E N
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPH 147
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+ + FV+ L I + NA ++ ++ G + AR +F+ +
Sbjct: 148 VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI 207
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAR 336
CK++V W +++ Y ++ ++++KL + + ++ T + I +G D A+
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAK 267
Query: 337 EVYNQM--PCK--DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
V+ Q+ C D L+ Q G + +A K+FN++ D + W+ MIA FCQ+G
Sbjct: 268 GVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 393 RMDEALDLFRQM------PKKNSVSW---------------------------------N 413
+EA+DLF +M P + ++S N
Sbjct: 328 FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN--------SLYFDALKSLVL 465
+I YA+ +MD+A +F + +N VSWN++I G+ +N S++ +AL++ V
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALRNQVS 446
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+ + TF +G Q+H +K+ + VSN+LI MYAKCG
Sbjct: 447 V-------TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
++ A+ VF +E +D+ SWN+LISGY+ +G +A + M + P+ +TF+G+LS
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CS+AGL +QG + F+ M+ D IEP EHY+C+V LLGR G+L++A ++ G+ + +
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W ++L A N E +A + ++ P + + Y+ +SNM+A A +W V +R M+
Sbjct: 620 IWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMK 679
Query: 706 DKRAGKLPGCSWIEVQNQIQCF---LSD 730
+ K PG SWIE Q + F LSD
Sbjct: 680 EMGVKKEPGLSWIEHQGDVHYFSVGLSD 707
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 185/418 (44%), Gaps = 81/418 (19%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---- 127
++I+ ++ G + AR +F+ + +++V W +++ Y+ N E++ KL M
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWN-------SVIAGYAKKGQFSDA 180
+N+++ + G + A+ V ++ C+ ++ Y + G SDA
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKG----VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
KVFN MP D+V ++ M+A + QNG A+ F +M E VV +S +N +
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 241 SARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQ 300
L E++ HG + + FD ++ NA+I YA+ +
Sbjct: 362 KCSGLGEQL-----------------HGLVVKVG--FD----LDIYVSNALIDVYAKCEK 398
Query: 301 IDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVY-----NQMP------------ 343
+D AVKLF +L K+ VSW+T+I GY +G+ +A ++ NQ+
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGA 458
Query: 344 ----------------------CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
K +A +L+ + G + A +FN++ T D W
Sbjct: 459 CASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
N++I+G+ G +AL + M K N +++ ++SG + AG +D + F++M
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 109/255 (42%), Gaps = 24/255 (9%)
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
C + LDLF + N +++ Y +AG A N+F M ERN VS+ +L
Sbjct: 73 CDILKKGSCLDLF---------ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQ 123
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
G+ D + + REG + + F ++ LH I+K GY +
Sbjct: 124 GYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
+ FV ALI Y+ CG V+SA VF I C D++ W ++S Y NGY ++ K M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 569 SEEVVPDQVTFIGMLSACSHAGLAN-----QGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
+P+ TF L A G + G L C V D + L+ L
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG------VGLLQLYT 293
Query: 624 RMGRLEEAFNVVRGM 638
++G + +AF V M
Sbjct: 294 QLGDMSDAFKVFNEM 308
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 125/251 (49%), Gaps = 27/251 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
++ N++I V+AK K+ A +LF ++S +N VSWNT+I GY + + E K F +
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN---LGEGGKAFSMF- 437
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLEL------------VPDKLESACWNSVIAGYAK 173
R+ + +T T L L + + + A NS+I YAK
Sbjct: 438 -REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAK 496
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLM 229
G A+ VFN M D+ S+N++++GY+ +G AL + M ++ N +++ +
Sbjct: 497 CGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGV 556
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVS-----WVTMLCGFARHGKITEARRLFDSMPCK- 283
+SG N+G + ++ FE + + + + M+ R G++ +A +L + +P +
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEP 616
Query: 284 NVVSWNAMIAA 294
+V+ W AM++A
Sbjct: 617 SVMIWRAMLSA 627
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 184/422 (43%), Gaps = 61/422 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+LG + +A +VF+ ++V ++ MI+ F +NG ++A LF +M + +V ++
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 108 YLHNSMVEEASKL--------FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
L+ + + S L V + D + +I Y + K++ A +L + K
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVF-----NLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
E + WN+VI GY G+ A +F N + V + V+++S L M L +
Sbjct: 414 EVS-WNTVIVGYENLGEGGKAFSMFREALRNQVSVTE-VTFSSALGACASLASMDLGVQV 471
Query: 215 ----FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKI 270
+ K V N ++ + GD+ A+ +F ++ + SW ++ G++ HG
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG 330
+A R+ D M ++ +G+++ +++G G
Sbjct: 532 RQALRILDIMKDRDC---------------------------KPNGLTFLGVLSGCSNAG 564
Query: 331 KLDEAREVYNQM-------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-CWN 382
+D+ +E + M PC + T ++ L ++G++D+A K+ + ++ W
Sbjct: 565 LIDQGQECFESMIRDHGIEPC--LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWR 622
Query: 383 SMIAGFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+M++ + A ++ + P K+ ++ + + YA A Q + +I ++M+E
Sbjct: 623 AMLSASMNQNNEEFARRSAEEILKINP-KDEATYVLVSNMYAGAKQWANVASIRKSMKEM 681
Query: 439 NI 440
+
Sbjct: 682 GV 683
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 266/495 (53%), Gaps = 15/495 (3%)
Query: 246 FEKIPNPNAVSWVTMLC-GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
F +P AVS V+ L G HG + L D + YA +I+ A
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPF------VETGFMDMYASCGRINYA 165
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QT 360
+F ++ H+D V+W+T+I Y R G +DEA +++ +M ++ + ++ ++ +T
Sbjct: 166 RNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 225
Query: 361 GRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
G + ++ L D T +++ + +G MD A + FR+M +N M+
Sbjct: 226 GNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV 285
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
SGY++ G++D A+ IF E++++V W ++I+ ++++ +AL+ M G KPD
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ +H I +G ++L ++NALI MYAKCG +++ VF +
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+++SW+S+I+ +++G A +A F +M E V P++VTF+G+L CSH+GL +G
Sbjct: 406 PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+F M +++ I P EHY C+VDL GR L EA V+ M V +N +WGSL+ ACR+
Sbjct: 466 KIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
H LE+G+FAA R+ ELEP + + +SN++A RWE+V +R +M +K K G S
Sbjct: 526 HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Query: 717 WIEVQNQIQCFLSDD 731
I+ + FL D
Sbjct: 586 RIDQNGKSHEFLIGD 600
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 194/380 (51%), Gaps = 29/380 (7%)
Query: 74 ISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD------VMPER 127
+ ++A G+I+ AR +FD+MS R++V+WNTMI Y +V+EA KLF+ VMP
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-- 210
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVF 184
D +++ R G + R + E + + ++++ +++ YA G A + F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
M V++L +M++GY++ G++ A F++ +K++V W M+S +V S A +
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 245 LFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW----NAMIAAYA 296
+FE++ P+ VS +++ A G + +A+ + + + S NA+I YA
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 297 QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
+ +D +F K+P ++ VSWS++IN G+ +A ++ +M +++ G
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 357 LI----QTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-K 406
++ +G V+E K+F ++ I + M+ F ++ + EAL++ MP
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 407 KNSVSWNTMISGYAQAGQMD 426
N V W +++S G+++
Sbjct: 511 SNVVIWGSLMSACRIHGELE 530
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 171/362 (47%), Gaps = 33/362 (9%)
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAG 170
A +FD M RD +W MI Y R G +++A +L E ++PD++ ++++
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM---ILCNIVSA 221
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG----YTQNGKMGLALHFFEKMAEKNVVSW 226
+ G ++ + D+ +L Y G M +A FF KM+ +N+
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC---- 282
MVSG+ G L A+ +F++ + V W TM+ + EA R+F+ M C
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW-----STIINGYIRVGKLDEARE 337
+VVS ++I+A A +L I + K H +G+ + +IN Y + G LD R+
Sbjct: 342 PDVVSMFSVISACA-NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRD 400
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT----ICWNSMIAGFCQSGR 393
V+ +MP +++ + +++++ L G +A +F ++ + + + ++ G SG
Sbjct: 401 VFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460
Query: 394 MDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLI 447
++E +F M + +++ + M+ + +A + A + ++M N+V W SL+
Sbjct: 461 VEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520
Query: 448 TG 449
+
Sbjct: 521 SA 522
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 198/396 (50%), Gaps = 38/396 (9%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G ++ A F +NL +M+S ++K G++ DA+ +FD+ +++LV W TMI+ Y+
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 110 HNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVP-DKLES--A 162
+ +EA ++F+ M + D S +I+ G L+KA+ + + + LES +
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
N++I YAK G VF MP +++VS++SM+ + +G+ AL F +M ++N
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 223 V----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEA 273
V V++ ++ G +SG + +++F + + P + M+ F R + EA
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 274 RRLFDSMP-CKNVVSWNAMIAA--YAQDLQIDE-AVKLFIKL-PHKDGVSWSTIINGYIR 328
+ +SMP NVV W ++++A +L++ + A K ++L P DG + + N Y R
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG-ALVLMSNIYAR 559
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV------DEASKMFNQLSTR-DTICW 381
+ ++ R + M K++ E L S + Q G+ D+ K N++ + D +
Sbjct: 560 EQRWEDVRNIRRVMEEKNVFKEKGL-SRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 382 NSMIAGF---CQSGRMDEALDLFRQMPKKNSVSWNT 414
+AG+ C S +D + KK+ V W++
Sbjct: 619 KLKLAGYVPDCGSVLVD-----VEEEEKKDLVLWHS 649
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 191/418 (45%), Gaps = 36/418 (8%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ N + + ++++++A G + AR+ F KMS RNL M++GY +++A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGY 171
+FD ++D W MI+ Y ++A + E + PD + SVI+
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF---SVISAC 354
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
A G A+ V + + V L S N+++ Y + G + FEKM +NVVSW+
Sbjct: 355 ANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWS 414
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
M++ G+ S A LF ++ PN V++V +L G + G + E +++F SM +
Sbjct: 415 SMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE 474
Query: 284 NVVS-----WNAMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWSTI-----INGYIRVGKL 332
++ + M+ + + + EA+++ +P + V W ++ I+G + +GK
Sbjct: 475 YNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKF 534
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
A+ + P D A LMS + + E + ++ + ++ Q+G
Sbjct: 535 -AAKRILELEPDHDGA--LVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNG 591
Query: 393 RMDEALDLFRQMPKKNSV--SWNTMISGYAQAGQMDSAENIFQAMEE---RNIVSWNS 445
+ E L ++ + N + + ++S AG + ++ +EE +++V W+S
Sbjct: 592 KSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHS 649
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 40 NQQIIHL-GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
N +I++ K G ++ VF +N+V+++SMI+ + +G+ SDA LF +M Q N+
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 99 ----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKAR 149
V++ ++ G H+ +VEE K+F M + N + + M+ + R L +A
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 150 ELLELVPDKLESACWNSV-----IAGYAKKGQFSDAEKVFNLMPVKD 191
E++E +P W S+ I G + G+F+ A+++ L P D
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFA-AKRILELEPDHD 547
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/524 (29%), Positives = 271/524 (51%), Gaps = 47/524 (8%)
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGK 331
LF N+ +N++I + + E + LF+ + + G ++ ++ R
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 332 LDEAREVYNQM-PC---KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
++++ + C D+AA T+L+S +GR+++A K+F+++ R + W ++ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 388 FCQSGRMDEALDLFRQMP---------------------------------------KKN 408
+ SGR EA+DLF++M +KN
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
S T+++ YA+ G+M+ A ++F +M E++IV+W+++I G+ NS + ++ + M +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
E KPDQ + +G I + ++ +LF++NALI MYAKCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+VF ++ D++ N+ ISG A NG+ +F F Q + PD TF+G+L C H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
AGL GL F + +A++ EHY C+VDL GR G L++A+ ++ M ++ NA +WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
+LL CR+ K+ ++ E L LEP NA NY+ LSN+++ GRW+E +R +M K
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 709 AGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
K+PG SWIE++ ++ FL+DD + I L + ++R
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 198/452 (43%), Gaps = 87/452 (19%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+FS+T N+ YNS+I+ F N + LF + + L YLH
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGL---------YLH------- 110
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKK 174
F++ L++ TR + +L LV + A S+++ Y+
Sbjct: 111 -----------GFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS 159
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV---- 230
G+ +DA K+F+ +P + +V++ ++ +GYT +G+ A+ F+KM E V + +
Sbjct: 160 GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVL 219
Query: 231 SGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
S V+ GDL S + + + N+ T++ +A+ GK+ +AR +FDSM K++V
Sbjct: 220 SACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV 279
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKD--------------------------GVSW- 319
+W+ MI YA + E ++LF+++ ++ G+S
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI 339
Query: 320 ------------STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
+ +I+ Y + G + EV+ +M KDI A +SGL + G V +
Sbjct: 340 DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSF 399
Query: 368 KMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMISG 418
+F Q + D + ++ G +G + + L F + K+ + M+
Sbjct: 400 AVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Query: 419 YAQAGQMDSAENIFQAMEER-NIVSWNSLITG 449
+ +AG +D A + M R N + W +L++G
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 182/397 (45%), Gaps = 42/397 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
++ S++S+++ +G+++DA +LFD++ R++V+W + +GY + EA LF M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 126 E----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFS 178
E D++ +++ G L+ +++ + + + S +++ YAK G+
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
A VF+ M KD+V++++M+ GY N + F +M ++N+ + GF++S
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 239 LSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
A L E W L RH +T N+ NA+I YA+
Sbjct: 325 SLGALDLGE---------WGISL--IDRHEFLT------------NLFMANALIDMYAKC 361
Query: 299 LQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA----LM 354
+ ++F ++ KD V + I+G + G + + V+ Q I+ + + L+
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 355 SGLIQTGRVDEASKMFNQLST-----RDTICWNSMIAGFCQSGRMDEALDLFRQMP-KKN 408
G + G + + + FN +S R + M+ + ++G +D+A L MP + N
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNS 445
++ W ++SG AE + + E + WN+
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLK--ELIALEPWNA 516
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 156/321 (48%), Gaps = 23/321 (7%)
Query: 44 IHLGKLGKVEEAVRVFSNT-IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
+H+G L E V+ + KN ++++++AK GK+ AR +FD M ++++V+W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK 158
TMI GY NS +E +LF M + D FS ++ G L+ + L+ D+
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DR 341
Query: 159 LESAC----WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
E N++I YAK G + +VF M KD+V N+ ++G +NG + L+
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 215 F---EKMAEKNVVSWNL-MVSGFVNSGDLSSARQLFEKIPNPNAVS-----WVTMLCGFA 265
F EK+ S L ++ G V++G + + F I A+ + M+ +
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 266 RHGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKLPHKDGVSWST 321
R G + +A RL MP + N + W A+++ +D Q+ E V K I L + ++
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 322 IINGYIRVGKLDEAREVYNQM 342
+ N Y G+ DEA EV + M
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMM 542
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 313/604 (51%), Gaps = 46/604 (7%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVF---------- 184
++ Y +KG + A+ L + +P++ ++ WN++I GY++ G DA K+F
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPER-DTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSP 149
Query: 185 ------NLMPVKDLVSYNSMLAGYTQNG---KMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
NL+P + S G + +G K GL L K N ++S +
Sbjct: 150 SATTLVNLLPFCGQCGFVSQ--GRSVHGVAAKSGLELDSQVK---------NALISFYSK 198
Query: 236 SGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV-VSWNAMIAA 294
+L SA LF ++ + + VSW TM+ +++ G EA +F +M KNV +S +I
Sbjct: 199 CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258
Query: 295 YAQDLQIDEAVKLFIKLPHKDGVSWST-IINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
+ + + L +K + +S T ++ Y R G L A +Y I T++
Sbjct: 259 LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 354 MSGLIQTGRVDEASKMFN---QLSTR-DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN- 408
+S + G +D A F+ QL + D + ++ G +S +D + L K
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 409 ---SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN---SLYFDALKS 462
++ N +I+ Y++ +++ +F+ ++E ++SWNS+I+G +Q+ S F+
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
++L G G PD T +G +LH Y L++ + N+ FV ALI MYAK
Sbjct: 439 MMLTG--GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 523 CGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
CG AE VF +I+ +WNS+ISGY+L+G A + +M + + PD++TF+G+
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
LSAC+H G ++G F+ M+++F I P +HY+ +V LLGR EA ++ MD+K
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 643 NAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRV 702
++ +WG+LL AC +H+ LE+GE+ A ++ L+ N Y+ +SN++A W++V R+R
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRN 676
Query: 703 LMRD 706
+M+D
Sbjct: 677 MMKD 680
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 222/470 (47%), Gaps = 67/470 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
S+++++ K G ++ A+ LFD+M +R+ V WN +I GY N +A KLF VM ++ F
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ-GF 147
Query: 131 SWA------LMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAE 181
S + L+ C + G + + R + + +L+S N++I+ Y+K + AE
Sbjct: 148 SPSATTLVNLLPFC-GQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAE 206
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSG 237
+F M K VS+N+M+ Y+Q+G A+ F+ M EKNV V+ ++S V+
Sbjct: 207 VLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE 266
Query: 238 DLSSARQLFEKIPNPNAVSWVT-MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
L L K N +S VT ++C ++R G + A RL+ S ++V ++++ YA
Sbjct: 267 PLHC---LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA 323
Query: 297 QDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+ +D AV F K D V+ I++G + +D ++ + +T
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 383
Query: 353 LMSGLIQT-GRVDEASK---MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
+++GLI + D+ +F QL I WNS+I+G QSGR A ++F QM
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG 443
Query: 405 ---PKKNSVS---------------------------------WNTMISGYAQAGQMDSA 428
P +++ +I YA+ G A
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 429 ENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
E++F++++ +WNS+I+G+ + L AL + M +G KPD+ TF
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
++++ Y + G + SA+ +F M ER+ V WN+LI G+ +N DA K ++M ++G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P +T G +H KSG D V NALI+ Y+KC + SAE +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F ++ +SWN++I Y+ +G EA FK M + V VT I +LSA H
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA--HVSHE 266
Query: 593 NQGLDLFKC-MVEDFA-IEPLAEHYS---CLV 619
+ KC MV D + + L YS CLV
Sbjct: 267 PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 137/291 (47%), Gaps = 22/291 (7%)
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF-----NQLS 374
++++N Y++ G + A+ ++++MP +D AL+ G + G +A K+F S
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 375 TRDTICWNSMI----AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
T N + GF GR + + + V N +IS Y++ ++ SAE
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK-NALISFYSKCAELGSAEV 207
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+F+ M++++ VSWN++I + Q+ L +A+ M + + T
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH-- 265
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISG 550
LH ++K G +ND+ V +L+ Y++CG + SAE+++ + + ++ S++S
Sbjct: 266 ----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 551 YALNG---YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
YA G A+ F +Q+ + D V +G+L C + + G+ L
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMK---IDAVALVGILHGCKKSSHIDIGMSL 369
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
Q+ ++ KSG ++V +L+ +Y K G V SA+ +F + D + WN+LI GY+ NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
Y +A+K F ML + P T + +L C G +QG + + +E ++
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVK 189
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ L+ + L A + R M K+ W +++GA
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGA 226
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 239/420 (56%), Gaps = 41/420 (9%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
D+ E +L+ G + A ++F Q+ RD + W SM+AG+C+ G ++ A ++F +MP
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+N +W+ MI+GYA+ + A ++F+ M+ +V+ +++ + + + AL
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL----- 265
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+ G + +EY++KS +L + AL+ M+ +CG
Sbjct: 266 --------------------------EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGD 299
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E A VF + D +SW+S+I G A++G+A +A F QM+S +P VTF +LSA
Sbjct: 300 IEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH GL +GL++++ M +D IEP EHY C+VD+LGR G+L EA N + M VK NA
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+ G+LLGAC+++KN E+ E L +++P ++ Y+ LSN++A AG+W+++E LR +M+
Sbjct: 420 ILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK 479
Query: 706 DKRAGKLPGCSWIEVQNQIQCF-LSDDS-----GRLRPETIQII----LIGISADIRDKF 755
+K K PG S IE+ +I F + DD G++R + +I+ LIG + D F
Sbjct: 480 EKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAF 539
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 116/224 (51%), Gaps = 17/224 (7%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
NS++ ++A G I+ A ++F +M R++VSW +M+AGY MVE A ++FD MP R+ F
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACWN-----SVIAGYAKKGQFSDAEKVFN 185
+W++MI Y + EKA +L E + K E N SVI+ A G E+ +
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFM--KREGVVANETVMVSVISSCAHLGALEFGERAYE 273
Query: 186 LMPVKDLVSYNSMLAG-----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
+ VK ++ N +L + + G + A+H FE + E + +SW+ ++ G G
Sbjct: 274 YV-VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAH 332
Query: 241 SARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM 280
A F ++ + P V++ +L + G + + ++++M
Sbjct: 333 KAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 117/231 (50%), Gaps = 14/231 (6%)
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
+ +V N +V + N G +++A ++F ++ + VSW +M+ G+ + G + AR +FD
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWS-----TIINGYIRVGKLDE 334
MP +N+ +W+ MI YA++ ++A+ LF + ++GV + ++I+ +G L+
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLF-EFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 335 AREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
Y + + TAL+ + G +++A +F L D++ W+S+I G
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 391 SGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
G +A+ F QM V++ ++S + G ++ I++ M++
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 33/261 (12%)
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
A IF ++ N+ +N LI F + A M + PD TF
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
VG Q H I++ G+ ND++V N+L+ MYA CG + +A ++F + D++SW S+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 548 ISGYA--------------------------LNGYAI-----EAFKAFKQMLSEEVVPDQ 576
++GY +NGYA +A F+ M E VV ++
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
+ ++S+C+H G G ++ +V+ L + LVD+ R G +E+A +V
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG-TALVDMFWRCGDIEKAIHVFE 308
Query: 637 GMDVKANAGLWGSLLGACRVH 657
G+ + ++ W S++ VH
Sbjct: 309 GLP-ETDSLSWSSIIKGLAVH 328
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 138/279 (49%), Gaps = 23/279 (8%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D+ NS++ Y G + A F +M ++VVSW MV+G+ G + +AR++F+++P
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI------AAYAQDLQIDEA 304
+ N +W M+ G+A++ +A LF+ M + VV+ ++ A+ L+ E
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 305 VKLFIKLPHK--DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR 362
++ H + + + +++ + R G +++A V+ +P D + ++++ GL G
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 363 VDEASKMFNQLST-----RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-----W 412
+A F+Q+ + RD + + ++++ G +++ L+++ M K + + +
Sbjct: 331 AHKAMHYFSQMISLGFIPRD-VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY 389
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
++ +AG++ AEN M V N+ I G L
Sbjct: 390 GCIVDMLGRAGKLAEAENFILKMH----VKPNAPILGAL 424
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 209/750 (27%), Positives = 373/750 (49%), Gaps = 88/750 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY--------LHNSMVEEAS-KLF 121
N++IS++ + + AR++FDKM QRN+V+ + A + LH+ +++ S ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 122 DVMPERDNFSWALMIT--CYTRKGKLEKARELLELVPDKLESACW------NSVIAGYAK 173
MP + S + +T C + L++AR++ LV A N++I+ Y +
Sbjct: 86 FFMPLNEIASSVVELTRKCVSIT-VLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG-----LALHFFEKMAEKNVVSWNL 228
G A KVF+ MP +++VSYN++ + Y++N L H + + N ++
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
+V D+ L +I + N V ++L ++ G + ARR+FD + ++
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVG-----KLDE 334
V+WN MI ++ +I++ + +F + GV ++S ++NG ++G KL
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGL-MFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
AR + + D+ + AL+ G + EA +F ++ + + WNS+I+G ++G
Sbjct: 324 ARIIVSD-SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 395 DEALDLFRQM-----PKKNSVSWNTMISGYAQA----------GQM-------------- 425
++A+ ++R++ P+ + +++ IS A+ GQ+
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 426 -----------DSAENIFQAMEERNIVSWNSLITGF--LQNSLYFDALKSLVLMGREGKK 472
+SA+ +F M+ER++V W +I G L NS A++ + M RE +
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL--AVQFFIEMYREKNR 500
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
D + + G H +++G+ + V AL+ MY K G+ E+AE +
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETI 560
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F+ DL WNS++ Y+ +G +A F+Q+L +PD VT++ +L+ACSH G
Sbjct: 561 FSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGST 620
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN-AGLWGSLL 651
QG L+ M E I+ +HYSC+V+L+ + G ++EA ++ N A LW +LL
Sbjct: 621 LQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLL 679
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
AC +NL+IG +AA ++ +L+P + + +I LSN++A GRWE+V +R +R + K
Sbjct: 680 SACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSK 739
Query: 712 LPGCSWIEV-QNQIQCFLSDDSGRLRPETI 740
PG SWIEV N Q F S D PE +
Sbjct: 740 DPGLSWIEVNNNNTQVFSSGDQS--NPEVV 767
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 266/484 (54%), Gaps = 10/484 (2%)
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-------PCKNVVSWNAMIAAYAQ 297
+FE++P+P W ++ G++ E + M P + + +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 298 DLQIDEAVK-LFIKLP-HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+++ +V L +++ KD V ++ ++ Y + L AR+V+ +MP ++ + TAL+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
+++G ++EA MF+ + R+ WN+++ G +SG + A LF +MPK++ +S+ +M
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
I GYA+ G M SA ++F+ ++ +W++LI G+ QN +A K M + KPD+
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
++ ++ Y+ + + +V ALI M AKCG ++ A ++F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ DL+S+ S++ G A++G EA + F++M+ E +VPD+V F +L C + L +
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL F+ M + ++I +HYSC+V+LL R G+L+EA+ +++ M +A+A WGSLLG C
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
+H N EI E A L ELEP +A +Y+ LSN++A RW +V LR M + K+ G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 715 CSWI 718
SWI
Sbjct: 545 RSWI 548
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 174/348 (50%), Gaps = 19/348 (5%)
Query: 14 NHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSM 73
N ++++ S H L + K V + GK + A +VF +N V++ ++
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 74 ISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWA 133
+ + K+G++ +A+ +FD M +RNL SWN ++ G + + + A KLFD MP+RD S+
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYT 242
Query: 134 LMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
MI Y + G + AR+L E ++ W+++I GYA+ GQ ++A KVF+ M K++
Sbjct: 243 SMIDGYAKGGDMVSARDLFEEA-RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVN----SGDLSSARQ 244
++ G EK+ N S + +V ++ G + A +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQ 300
LFE++P + VS+ +M+ G A HG +EA RLF+ M + + V++ ++ Q
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 301 IDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMP 343
++E ++ F + K + +S I+N R GKL EA E+ MP
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 215/427 (50%), Gaps = 25/427 (5%)
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM-----PVKDLVSYNSMLAGYTQN 205
+ E VP + WN +I GY+ K F + + M D ++ ++ + N
Sbjct: 65 VFERVPSP-GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 206 G--KMGLALH--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
G ++G ++H +K+VV V + DL SAR++F ++P NAVSW ++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST 321
+ + G++ EA+ +FD MP +N+ SWNA++ + + A KLF ++P +D +S+++
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----D 377
+I+GY + G + AR+++ + D+ A +AL+ G Q G+ +EA K+F+++ + D
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 378 TICWNSMIAGFCQSG--RMDEALD--LFRQMPKKNS-VSWNTMISGYAQAGQMDSAENIF 432
+++ Q G + E +D L ++M K +S +I A+ G MD A +F
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
+ M +R++VS+ S++ G + +A++ M EG PD+ F +
Sbjct: 364 EEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 493 VGNQLHEYILKSGYI---NDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLI 548
G + E + K I D + + ++ + ++ G+++ A ++ ++ +W SL+
Sbjct: 424 EGLRYFELMRKKYSILASPDHY--SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 549 SGYALNG 555
G +L+G
Sbjct: 482 GGCSLHG 488
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 201/420 (47%), Gaps = 60/420 (14%)
Query: 89 LFDKMSQRNLVSWNTMIAGYLHNSM-VEEASKLFDVM----PERDNFSWALMITCYTRKG 143
+F+++ WN +I GY + + E S L +M D +++ L++ + G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 144 KLEKARELLELVP----DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
++ + LV DK + S + Y K A KVF MP ++ VS+ +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDK-DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
Y ++G++ A F+ M E+N+ SWN +V G V SGDL +A++LF+++P + +S+ +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW 319
M+ G+A+ G + AR LF+ +V +W+A+I YAQ+ Q +EA K+F ++ K+
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 320 STIINGYI----------------------------------------RVGKLDEAREVY 339
I+ G + + G +D A +++
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 340 NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMD 395
+MP +D+ + ++M G+ G EA ++F ++ D + + ++ QS ++
Sbjct: 364 EEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 396 EALDLFRQMPKKNSV-----SWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITG 449
E L F M KK S+ ++ +++ ++ G++ A + ++M E + +W SL+ G
Sbjct: 424 EGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 483
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 276 bits (705), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 244/436 (55%), Gaps = 43/436 (9%)
Query: 351 TALMSGLIQTGRVDEASKMF--NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
TAL+S + G V +A K+F N S++ ++C+N++I+G+ + ++ +A +FR+M K+
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KET 150
Query: 409 SVS-------------------W---------------------NTMISGYAQAGQMDSA 428
VS W N+ I+ Y + G +++
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 429 ENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
+F M + +++WN++I+G+ QN L +D L+ M G PD T
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
++G+++ + + +G++ ++FVSNA I+MYA+CG + A VF + L+SW ++I
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
Y ++G F M+ + PD F+ +LSACSH+GL ++GL+LF+ M ++ +
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
EP EHYSCLVDLLGR GRL+EA + M V+ + +WG+LLGAC++HKN+++ E A
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
++ E EP+N Y+ +SN+++++ E + R+RV+MR++ K PG S++E + ++ FL
Sbjct: 451 KVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFL 510
Query: 729 SDDSGRLRPETIQIIL 744
+ D + E + +L
Sbjct: 511 AGDRSHEQTEEVHRML 526
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 128/263 (48%), Gaps = 27/263 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
NS I+++ K G + R+LFD+M + L++WN +I+GY N + + +L++ M
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 128 -DNFSWALMITCYTRKGKLEKARELLEL------VPDKLESACWNSVIAGYAKKGQFSDA 180
D F+ +++ G + E+ +L VP+ S N+ I+ YA+ G + A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVS---NASISMYARCGNLAKA 311
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNS 236
VF++MPVK LVS+ +M+ Y +G + L F+ M ++ + + +++S +S
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 237 GDLSSARQLFEKI-------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSW 288
G +LF + P P S + L G R G++ EA +SMP + + W
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG--RAGRLDEAMEFIESMPVEPDGAVW 429
Query: 289 NAMIAAYAQDLQIDEAVKLFIKL 311
A++ A +D A F K+
Sbjct: 430 GALLGACKIHKNVDMAELAFAKV 452
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 176/426 (41%), Gaps = 92/426 (21%)
Query: 101 WNTMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMIT---------------CYTR 141
WN + + S+ E+ L+ M D FS+ ++ C+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 142 KGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS--YNSML 199
KG E E ++I+ Y K G +DA KVF P +S YN+++
Sbjct: 81 KGGCET------------EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS----ARQLFEKIPNPNAV 255
+GYT N K+ A + F +M E V ++ + G V + R L +
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 256 SWVTMLCGF----ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF--- 308
S V +L F + G + RRLFD MP K +++WNA+I+ Y+Q+ + ++L+
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 309 ------------------------IKLPHKDG-------------VSWSTIINGYIRVGK 331
K+ H+ G VS ++ I+ Y R G
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS-ISMYARCGN 307
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAG 387
L +AR V++ MP K + + TA++ G + +F+ + R D + +++
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Query: 388 FCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIV 441
SG D+ L+LFR M ++ + ++ ++ +AG++D A ++M E +
Sbjct: 368 CSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 442 SWNSLI 447
W +L+
Sbjct: 428 VWGALL 433
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WN + SL+ +++ M R G PD +F G QLH ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS--WNSLISGYALNGYAIEA 560
K G + FV ALI+MY KCG V A +VF +S +N+LISGY N +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACS 587
F++M V D VT +G++ C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT 167
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 45 HLG--KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
HLG K+G E V SN N+ N+ IS++A+ G ++ AR +FD M ++LVSW
Sbjct: 269 HLGAKKIGH-EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWT 327
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD- 157
MI Y + M E LFD M +R D + ++++ + G +K EL +
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 158 -KLESAC--WNSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLALH 213
KLE ++ ++ + G+ +A + MPV+ D + ++L + + +A
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAEL 447
Query: 214 FFEKMAE 220
F K+ E
Sbjct: 448 AFAKVIE 454
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/647 (28%), Positives = 330/647 (51%), Gaps = 31/647 (4%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV-KDLV 193
++ Y++ G L +AR + + + ++ WN+VIA Y K +A ++F +DL+
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLER-NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLI 87
Query: 194 SYNSMLAGYTQ-NGKMGLALHFFEKMAEK-------NVVSWNLMVSGFVNSGDLSSARQL 245
+YN++L+G+ + +G A+ F +M K + + MV ++ QL
Sbjct: 88 TYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQL 147
Query: 246 ---FEKIPNPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNV--VSWNAMIAAYAQDL 299
K N V+ L +++ GK E +F+ + V V+ NAMIAAY ++
Sbjct: 148 HGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 300 QIDEAVKLFIKLPH-KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI-------AAET 351
ID+A+ +F + P D +SW+T+I GY + G +EA ++ M + A
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 352 ALMSGL--IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
++S L ++ G+ + +++ S + + ++ +C+ G M A N
Sbjct: 268 NVLSSLKSLKIGK-EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV--LMG 467
S ++MI GY+ G+M A+ +F ++ E+N+V W ++ G+L N D++ L +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL-NLRQPDSVLELARAFIA 385
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
E PD + G ++H + L++G + D + A + MY+KCG VE
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVE 445
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
AE++F + D + +N++I+G A +G+ ++F+ F+ M PD++TF+ +LSAC
Sbjct: 446 YAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACR 505
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD-VKANAGL 646
H GL +G FK M+E + I P HY+C++DL G+ RL++A ++ G+D V+ +A +
Sbjct: 506 HRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
G+ L AC +KN E+ + +L +E N S YI ++N +A +GRW+E++R+R MR
Sbjct: 566 LGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRG 625
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRD 753
K GCSW + Q F S D E I +L ++ D+ +
Sbjct: 626 KELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 182/378 (48%), Gaps = 78/378 (20%)
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IKLP 312
AVS ++ +++ G + EAR +FD M +NV SWNA+IAAY + + EA +LF
Sbjct: 23 AVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNC 82
Query: 313 HKDGVSWSTIINGYIRV-GKLDEAREVYNQMPCK--------DIAAETAL---------- 353
+D ++++T+++G+ + G EA E++ +M K D T +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 354 --------------------MSGLI----QTGRVDEASKMFNQLSTR--DTICWNSMIAG 387
+S LI + G+ E +FN D++ N+MIA
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 388 FCQSGRMDEALDLFRQMPKKN-SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
+C+ G +D+AL +F + P+ N ++SWNT+I+GYAQ G + A + +MEE N + W+
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE-NGLKWDEH 261
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
G + N L +LKSL ++G ++H +LK+G
Sbjct: 262 SFGAVLNVL--SSLKSL----------------------------KIGKEVHARVLKNGS 291
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
++ FVS+ ++ +Y KCG ++ AE +L S +S+I GY+ G +EA + F
Sbjct: 292 YSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDS 351
Query: 567 MLSEEVVPDQVTFIGMLS 584
+ + +V F+G L+
Sbjct: 352 LSEKNLVVWTAMFLGYLN 369
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/572 (23%), Positives = 260/572 (45%), Gaps = 46/572 (8%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+ H +I S + NQ + K G + EA VF + +N+ ++N++I+ + K
Sbjct: 9 LHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFN 68
Query: 82 KISDARQLFDKMS-QRNLVSWNTMIAGYLHNSMVE-EASKLFDVMPER-------DNFSW 132
+ +AR+LF+ + +R+L+++NT+++G+ E EA ++F M + D+F+
Sbjct: 69 NVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTV 128
Query: 133 ALMITCYTRKGKL---EKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV 189
M+ + + E+ +L + +S+I Y+K G+F + +FN V
Sbjct: 129 TTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 190 K--DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN-VVSWNLMVSGFVNSGDLSSARQLF 246
+ D V+ N+M+A Y + G + AL F + E N +SWN +++G+ +G A ++
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 247 EKIPNPNAVSWVTMLCGFA----------RHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
+ N + W G + GK AR L + VS + ++ Y
Sbjct: 249 VSME-ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS-SGIVDVYC 306
Query: 297 QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
+ + A + + S S++I GY GK+ EA+ +++ + K++ TA+ G
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 357 ---LIQTGRVDEASKMF--NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ-------M 404
L Q V E ++ F N+ +T D++ S++ M+ ++ M
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
KK ++ M Y++ G ++ AE IF + ER+ V +N++I G + + +
Sbjct: 427 DKKLVTAFVDM---YSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN-DLFVSNALIAMYAKC 523
M G KPD+ TF G + + ++++ I+ + +I +Y K
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNG 555
R++ A ++ +E +D + +++I G LN
Sbjct: 544 YRLDKAIEL---MEGIDQVEKDAVILGAFLNA 572
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 41/254 (16%)
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
ST + N ++ + +SG + EA ++F +M ++N SWN +I+ Y + + A +F+
Sbjct: 19 STLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFE 78
Query: 434 AME-ERNIVSWNSLITGFLQ-NSLYFDALKSLVLMGREGKKP---DQSTFXXXXXXXXXX 488
+ ER+++++N+L++GF + + +A++ M R+ K D T
Sbjct: 79 SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKL 138
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV--------- 539
G QLH ++K+G F ++LI MY+KCG+ + +F CV
Sbjct: 139 TNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNG-SCVEFVDSVARN 197
Query: 540 --------------------------DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
D ISWN+LI+GYA NGY EA K M +
Sbjct: 198 AMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLK 257
Query: 574 PDQVTFIGMLSACS 587
D+ +F +L+ S
Sbjct: 258 WDEHSFGAVLNVLS 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 154/359 (42%), Gaps = 37/359 (10%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+GK E RV N + N + ++ V+ K G + A NL S ++MI G
Sbjct: 277 KIGK-EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVG 335
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTR----KGKLEKARELLELVPDKLESAC 163
Y + EA +LFD + E++ W M Y LE AR + + +S
Sbjct: 336 YSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLV 395
Query: 164 WNSVIAGYAKKGQFSDAEKVFN-------LMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
SV+ + + +++ LM K + ++ M Y++ G + A F+
Sbjct: 396 MVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDM---YSKCGNVEYAERIFD 452
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITE 272
E++ V +N M++G + G + + Q FE + P+ ++++ +L G + E
Sbjct: 453 SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLE 512
Query: 273 ARRLFDSMPCKNVVS-----WNAMIAAYAQDLQIDEAVKLF--IKLPHKDGVSWSTIING 325
+ F SM +S + MI Y + ++D+A++L I KD V I+
Sbjct: 513 GEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAV----ILGA 568
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ-------TGRVDEASKMFNQLSTRD 377
++ ++ E+ ++ K + E + S IQ +GR DE ++ +Q+ ++
Sbjct: 569 FLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKE 627
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 207/353 (58%), Gaps = 6/353 (1%)
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
A LF +M ++N VSW M+SGYA++G + +A +F+ M ER++ SWN+++ QN L+
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 457 FDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A+ M E +P++ T Q+ +H + + +D+FVSN+
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS 300
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS---EEV 572
L+ +Y KCG +E A VF L +WNS+I+ +AL+G + EA F++M+ ++
Sbjct: 301 LVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
PD +TFIG+L+AC+H GL ++G F M F IEP EHY CL+DLLGR GR +EA
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 633 NVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
V+ M +KA+ +WGSLL AC++H +L++ E A L L P+N ++N++ E G
Sbjct: 421 EVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMG 480
Query: 693 RWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILI 745
WEE R R +++ + A K PG S IE+ N++ F S D PET +I +I
Sbjct: 481 NWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKS--HPETEEIYMI 531
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 17/243 (6%)
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNS-GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
H F+ VV ++ + +S ++ ARQLF+++ N VSW ML G+AR G I+
Sbjct: 151 HLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG-----VSWSTIINGY 326
A LF+ MP ++V SWNA++AA Q+ EAV LF ++ ++ V+ +++
Sbjct: 211 NAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSAC 270
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWN 382
+ G L A+ ++ +D++++ + + L+ + G ++EAS +F S + WN
Sbjct: 271 AQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWN 330
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKN-------SVSWNTMISGYAQAGQMDSAENIFQAM 435
SMI F GR +EA+ +F +M K N +++ +++ G + F M
Sbjct: 331 SMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLM 390
Query: 436 EER 438
R
Sbjct: 391 TNR 393
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 146/305 (47%), Gaps = 28/305 (9%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKN-GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
+F + H +V +++ +A + I+ ARQLFD+MS+RN+VSW M++GY + +
Sbjct: 150 THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDI 209
Query: 115 EEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE-------LVPDKLESACWNSV 167
A LF+ MPERD SW ++ T+ G +A L + P+++ C V
Sbjct: 210 SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC---V 266
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
++ A+ G A+ + +DL S NS++ Y + G + A F+ ++K++
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKI-------PNPNAVSWVTMLCGFARHGKITEARRL 276
+WN M++ F G A +FE++ P+ ++++ +L G +++ R
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 277 FDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-DGVSWSTIINGYIRVG 330
FD M + + + +I + + DEA+++ + K D W +++N G
Sbjct: 387 FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
Query: 331 KLDEA 335
LD A
Sbjct: 447 HLDLA 451
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 24/313 (7%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
+ + A ++F +N+V++ +M+S +A++G IS+A LF+ M +R++ SWN ++A
Sbjct: 175 VSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAAC 234
Query: 109 LHNSMVEEASKLFDVM---PE-RDN-FSWALMITCYTRKGKLEKARELLELVPDK-LESA 162
N + EA LF M P R N + +++ + G L+ A+ + + L S
Sbjct: 235 TQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD 294
Query: 163 CW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
+ NS++ Y K G +A VF + K L ++NSM+ + +G+ A+ FE+M +
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 221 KNV-------VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHG 268
N+ +++ +++ + G +S R F+ + N P + ++ R G
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 269 KITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQID---EAVKLFIKLPHKDGVSWSTIIN 324
+ EA + +M K + W +++ A +D AVK + L +G + + N
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMAN 474
Query: 325 GYIRVGKLDEARE 337
Y +G +EAR
Sbjct: 475 LYGEMGNWEEARR 487
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
VF N + GK G +EEA VF K+L +NSMI+ FA +G+ +A +F++M +
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 96 RNL-------VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKG 143
N+ +++ ++ H +V + FD+M R + +I R G
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 144 KLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
+ ++A E++ + K + A W S++ G AE + VK+LV+ N GY
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAE-----VAVKNLVALNPNNGGYV 469
Query: 204 Q-----NGKMG 209
G+MG
Sbjct: 470 AMMANLYGEMG 480
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYA-KCGRVESAEQVFTAIECVDLISWNSLISGYAL-- 553
+H ++ KSG+ + V AL+ YA + A Q+F + +++SW +++SGYA
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 554 -----------------------------NGYAIEAFKAFKQMLSEEVV-PDQVTFIGML 583
NG +EA F++M++E + P++VT + +L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 584 SACSHAGLAN--QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
SAC+ G +G+ F D + + + LVDL G+ G LEEA +V + M K
Sbjct: 268 SACAQTGTLQLAKGIHAF-AYRRDLSSDVFVS--NSLVDLYGKCGNLEEASSVFK-MASK 323
Query: 642 ANAGLWGSLLGACRVHKNLE-----IGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
+ W S++ +H E E + +++++P + + +I L N G
Sbjct: 324 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT-FIGLLNACTHGG 378
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 259/482 (53%), Gaps = 14/482 (2%)
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DG 316
C + + ARRL P + +N ++ Y++ + +V +F+++ K D
Sbjct: 47 CAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDS 106
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQ 372
S++ +I L +++ Q + + + + LI G V+ A K+F++
Sbjct: 107 FSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDE 166
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
+ + + WN++I + + A ++F +M +N SWN M++GY +AG+++SA+ IF
Sbjct: 167 MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIF 226
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
M R+ VSW+++I G N + ++ + R G P++ + +
Sbjct: 227 SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFE 286
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE---CVDLISWNSLIS 549
G LH ++ K+GY + V+NALI MY++CG V A VF ++ C+ +SW S+I+
Sbjct: 287 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI--VSWTSMIA 344
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
G A++G EA + F +M + V PD ++FI +L ACSHAGL +G D F M + IE
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P EHY C+VDL GR G+L++A++ + M + A +W +LLGAC H N+E+ E R
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 464
Query: 670 LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS 729
L+EL+P+N+ + + LSN +A AG+W++V +R M +R K S +EV + F +
Sbjct: 465 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 524
Query: 730 DD 731
+
Sbjct: 525 GE 526
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 166/343 (48%), Gaps = 26/343 (7%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+ + + +L ++I ++ G + AR++FD+M Q NLV+WN +I + V
Sbjct: 131 QALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG 190
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
A ++FD M R++ SW +M+ Y + G+LE A+ + +P + + W+++I G A G
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR-DDVSWSTMIVGIAHNGS 249
Query: 177 FSDAEKVFNLMPVKDL----VSYNSMLAGYTQNG--KMGLALHFFEKMAEKNVVSW---- 226
F+++ F + + VS +L+ +Q+G + G LH F EK SW
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF---VEKAGYSWIVSV 306
Query: 227 -NLMVSGFVNSGDLSSARQLFEKIPNPNA-VSWVTMLCGFARHGKITEARRLFDSMPCKN 284
N ++ + G++ AR +FE + VSW +M+ G A HG+ EA RLF+ M
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 285 V----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----WSTIINGYIRVGKLDEA 335
V +S+ +++ A + I+E F ++ + + +++ Y R GKL +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 336 REVYNQMPCKDIA-AETALMSGLIQTGRVDEASKMFNQLSTRD 377
+ QMP A L+ G ++ A ++ +L+ D
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELD 469
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 157/326 (48%), Gaps = 22/326 (6%)
Query: 130 FSWALMITC-YTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP 188
F+ L++ C + L AR LL P+ ++ +N+++ GY++ + ++ VF M
Sbjct: 39 FTGKLILHCAISISDALPYARRLLLCFPEP-DAFMFNTLVRGYSESDEPHNSVAVFVEMM 97
Query: 189 VKDLVSYNSMLAGYT-------QNGKMGLALHF--FEKMAEKNVVSWNLMVSGFVNSGDL 239
K V +S + ++ + G +H + E ++ ++ + G +
Sbjct: 98 RKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCV 157
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
AR++F+++ PN V+W ++ R + AR +FD M +N SWN M+A Y +
Sbjct: 158 EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAG 217
Query: 300 QIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEA----REVYNQMPCKDIAAETALMS 355
+++ A ++F ++PH+D VSWST+I G G +E+ RE+ + + T ++S
Sbjct: 218 ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLS 277
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICW-----NSMIAGFCQSGRMDEALDLFRQMPKKNS- 409
Q+G E K+ + + W N++I + + G + A +F M +K
Sbjct: 278 ACSQSGSF-EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI 336
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAM 435
VSW +MI+G A GQ + A +F M
Sbjct: 337 VSWTSMIAGLAMHGQGEEAVRLFNEM 362
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 253/475 (53%), Gaps = 26/475 (5%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKL 332
AR+LFD +N +I AY Q E++ L+ L DG L
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY-NLLSFDG---------------L 78
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
+ +N + + +A L+ S+ F D+ C ++I + + G
Sbjct: 79 RPSHHTFNFIFAASASFSSARPLRLLH-------SQFFRSGFESDSFCCTTLITAYAKLG 131
Query: 393 RMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQ 452
+ A +F +M K++ WN MI+GY + G M +A +F +M +N+ SW ++I+GF Q
Sbjct: 132 ALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQ 191
Query: 453 NSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
N Y +ALK + M ++ KP+ T ++G +L Y ++G+ ++++
Sbjct: 192 NGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIY 251
Query: 512 VSNALIAMYAKCGRVESAEQVFTAI-ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
V NA I MY+KCG ++ A+++F + +L SWNS+I A +G EA F QML E
Sbjct: 252 VCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLRE 311
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
PD VTF+G+L AC H G+ +G +LFK M E I P EHY C++DLLGR+G+L+E
Sbjct: 312 GEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQE 371
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAE 690
A+++++ M +K +A +WG+LLGAC H N+EI E A+ L +LEP N N + +SN++A
Sbjct: 372 AYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAA 431
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSW-IEVQNQIQCFLSDDSGRLRPETIQIIL 744
+W+ V R+R LM+ + K G S+ +EV + F +D R I +L
Sbjct: 432 NEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVL 486
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 177/385 (45%), Gaps = 43/385 (11%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCY 139
AR+LFD +N +I Y + E+ L++++ P F++ I
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNF---IFAA 91
Query: 140 TRKGKLEKARELL--ELVPDKLESA--CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
+ + LL + ES C ++I YAK G A +VF+ M +D+ +
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-----EKIP 250
N+M+ GY + G M A+ F+ M KNV SW ++SGF +G+ S A ++F +K
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 251 NPNAVSWVTMLCGFARHGKITEARRL---------FDSMPCKNVVSWNAMIAAYAQDLQI 301
PN ++ V++L A G++ RRL FD N+ NA I Y++ I
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD-----NIYVCNATIEMYSKCGMI 266
Query: 302 DEAVKLFIKLPHKDGV-SWSTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSG 356
D A +LF +L ++ + SW+++I GK DEA ++ QM D L+
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 357 LIQTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSV 410
+ G V + ++F + I + MI + G++ EA DL + MP K ++V
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 411 SWNTMISGYAQAGQMDSAENIFQAM 435
W T++ + G ++ AE +A+
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEAL 411
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 41/283 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++I+ +AK G + AR++FD+MS+R++ WN MI GY ++ A +LFD MP ++
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 131 SWALMITCYTRKGKLEKARELL-------ELVPDKLE-----SACWN-------SVIAGY 171
SW +I+ +++ G +A ++ + P+ + AC N + GY
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA-EKNVVSWNLMV 230
A++ F D ++ N+ + Y++ G + +A FE++ ++N+ SWN M+
Sbjct: 241 ARENGFFD-----------NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 231 SGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
G A LF ++ P+AV++V +L G + + + LF SM + +
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 287 S-----WNAMIAAYAQDLQIDEAVKLFIKLPHK-DGVSWSTII 323
S + MI + ++ EA L +P K D V W T++
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 19/250 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLF-----DKMS 94
N I + G ++ A+ +F + KN+ ++ ++IS F++NG S+A ++F DK
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---DN-FSWALMITCYTRKGKLEKARE 150
+ N ++ +++ + +E +L E DN + I Y++ G ++ A+
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNG 206
L E + ++ WNS+I A G+ +A +F M D V++ +L G
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 207 KMGLALHFFEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTM 260
+ F+ M E + +S + M+ G L A L + +P P+AV W T+
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 261 LCGFARHGKI 270
L + HG +
Sbjct: 392 LGACSFHGNV 401
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 237/443 (53%), Gaps = 8/443 (1%)
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GR 362
+F D W+ +I G+ + + + +Y +M C L++
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 363 VDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISG 418
+E +++ Q++ D NS+I + +G A LF ++P+ + VSWN++I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y +AG+MD A +F+ M E+N +SW ++I+G++Q + +AL+ M +PD +
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
+ G +H Y+ K+ D + LI MYAKCG +E A +VF I+
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
+ +W +LISGYA +G+ EA F +M + P+ +TF +L+ACS+ GL +G +
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
F M D+ ++P EHY C+VDLLGR G L+EA ++ M +K NA +WG+LL ACR+HK
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 659 NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
N+E+GE L ++P++ Y+ +N+HA +W++ R LM+++ K+PGCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 719 EVQNQIQCFLSDDSGRLRPETIQ 741
++ FL+ D E IQ
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQ 513
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 170/358 (47%), Gaps = 25/358 (6%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-----PERDNFSWALMITCYT 140
A+ +FD + + WN MI G+ + E + L+ M P +L+ C
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 141 RKGKLEKARELLELVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
E + ++ E+ + NS+I YA G F A +F+ +P D VS+NS+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNA 254
+ GY + GKM +AL F KMAEKN +SW M+SG+V + A QLF ++ N P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIK 310
VS L A+ G + + + + + + V +I YA+ +++EA+++F
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 311 LPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEA 366
+ K +W+ +I+GY G EA + +M I TA+++ TG V+E
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 367 SKMFNQL----STRDTI-CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISG 418
+F + + + TI + ++ ++G +DEA ++MP K N+V W ++
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 158/333 (47%), Gaps = 20/333 (6%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
V+ N I G + A +F + V++NS+I + K GK+ A LF KM++
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR-- 149
+N +SW TMI+GY+ M +EA +LF M E DN S A ++ + G LE+ +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 150 -ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
L +++S +I YAK G+ +A +VF + K + ++ ++++GY +G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 209 GLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVT 259
A+ F +M + NV+++ +++ +G + + +F + P +
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 260 MLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKLPHKD 315
++ R G + EA+R MP K N V W A++ A +++++ E + ++ I +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
G + N + K D+A E M + +A
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA 482
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR---EGKKPDQSTFXXXXXX 484
A+ +F + + WN +I GF S + +SL+L R + TF
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGF---SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
+ Q+H I K GY ND++ N+LI YA G + A +F I D +SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 545 NSLISGYA--------------------------LNGYA-----IEAFKAFKQMLSEEVV 573
NS+I GY ++GY EA + F +M + +V
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
PD V+ LSAC+ G QG + I + L+D+ + G +EEA
Sbjct: 245 PDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 634 VVRGMDVKANAGLWGSLLG--ACRVHKNLEIGEFAAMRLSELEPHNASNYITLS 685
V + + K + W +L+ A H I +F M+ ++P N IT +
Sbjct: 304 VFKNIK-KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP----NVITFT 352
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 251/430 (58%), Gaps = 13/430 (3%)
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+ +IN Y++ L++A ++++QMP +++ + T ++S + ++ + + L RD +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC-KIHQKALELLVLMLRDNV 158
Query: 380 CWN----SMIAGFCQSGRMDEAL---DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
N S + C +G D + + ++ + + + +I +A+ G+ + A ++F
Sbjct: 159 RPNVYTYSSVLRSC-NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
M + + WNS+I GF QNS AL+ M R G +Q+T +
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G Q H +I+K Y DL ++NAL+ MY KCG +E A +VF ++ D+I+W+++ISG A
Sbjct: 278 LGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
NGY+ EA K F++M S P+ +T +G+L ACSHAGL G F+ M + + I+P+
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
EHY C++DLLG+ G+L++A ++ M+ + +A W +LLGACRV +N+ + E+AA ++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDS 732
L+P +A Y LSN++A + +W+ VE +R MRD+ K PGCSWIEV QI F+ D+
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDN 515
Query: 733 GRLRPETIQI 742
P+ +++
Sbjct: 516 S--HPQIVEV 523
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 193/404 (47%), Gaps = 45/404 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N +I+++ K ++DA QLFD+M QRN++SW TMI+ Y + ++A +L V+ RDN
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL-VLMLRDN- 157
Query: 131 SWALMITCYTRKGKLEKARELLE-------LVPDKLESACW--NSVIAGYAKKGQFSDAE 181
+ YT L + + ++ + LES + +++I +AK G+ DA
Sbjct: 158 ---VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD--- 238
VF+ M D + +NS++ G+ QN + +AL F++M ++ ++ + +
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 239 -LSSARQLFEKIPNPNAV-----SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
L Q I + + V M C + G + +A R+F+ M ++V++W+ MI
Sbjct: 275 LLELGMQAHVHIVKYDQDLILNNALVDMYC---KCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYI----RVGKLDEA-------REVYNQ 341
+ AQ+ EA+KLF ++ I G + G L++ +++Y
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGR----MDE 396
P ++ ++ L + G++D+A K+ N++ D + W +++ G C+ R +
Sbjct: 392 DPVREHYG--CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQRNMVLAEY 448
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
A + +++ ++ + + YA + + DS E I M +R I
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 156/351 (44%), Gaps = 30/351 (8%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ + ++ +++I VFAK G+ DA +FD+M + + WN++I G+ NS + A
Sbjct: 185 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKAREL-----LELVPDKLESACWNSVIAGYA 172
+LF M + +T R EL + +V + N+++ Y
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYC 304
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
K G DA +VFN M +D++++++M++G QNG AL FE+M + + G
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVG 364
Query: 233 FV----NSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+ ++G L F + +P + M+ + GK+ +A +L + M C+
Sbjct: 365 VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 284 -NVVSWNAMIAA--YAQDLQIDE-AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVY 339
+ V+W ++ A +++ + E A K I L +D +++ + N Y K D E+
Sbjct: 425 PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIR 484
Query: 340 NQMPCKDIAAET------------ALMSGLIQTGRVDEASKMFNQLSTRDT 378
+M + I E A + G ++ E SK NQL R T
Sbjct: 485 TRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 535
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A+K++ + G D +T+ GN + ++ +G+ +F+ N LI
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
MY K + A Q+F + ++ISW ++IS Y+ +A + ML + V P+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 579 FIGMLSACS--------HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
+ +L +C+ H G+ +GL+ D + S L+D+ ++G E+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLE------SDVFVR------SALIDVFAKLGEPED 212
Query: 631 AFNVVRGMDVKANAGLWGSLLGA 653
A +V M V +A +W S++G
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGG 234
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 26 LTIGSIGGKHVFNKNQQII-------HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFA 78
L +G H+ +Q +I K G +E+A+RVF+ ++++T+++MIS A
Sbjct: 276 LELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 79 KNGKISDARQLFDKMSQRNLVSWNTMIAGYL----HNSMVEEA-------SKLFDVMPER 127
+NG +A +LF++M I G L H ++E+ KL+ + P R
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 128 DNFSWALMITCYTRKGKLEKARELL---ELVPD-----KLESAC---WNSVIAGYAKKGQ 176
+++ MI + GKL+ A +LL E PD L AC N V+A YA
Sbjct: 396 EHY--GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA---- 449
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
A+KV L P +D +Y + Y + K
Sbjct: 450 ---AKKVIALDP-EDAGTYTLLSNIYANSQK 476
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 31/445 (6%)
Query: 315 DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL- 373
D V +T++N Y + G L+EAR+V+ +MP +D T L+SG Q R +A FNQ+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 374 ------------------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
+ C + GFC D N + +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS-----------NVHVGSAL 202
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
+ Y + G MD A+ +F A+E RN VSWN+LI G + S AL+ M R+G +P
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA 535
++ + G +H Y++KSG F N L+ MYAK G + A ++F
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 536 IECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG 595
+ D++SWNSL++ YA +G+ EA F++M + P++++F+ +L+ACSH+GL ++G
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 596 LDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACR 655
++ M +D I P A HY +VDLLGR G L A + M ++ A +W +LL ACR
Sbjct: 383 WHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 656 VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGC 715
+HKN E+G +AA + EL+P + ++ L N++A GRW + R+R M++ K P C
Sbjct: 442 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 501
Query: 716 SWIEVQNQIQCFLSDDSGRLRPETI 740
SW+E++N I F+++D + E I
Sbjct: 502 SWVEIENAIHMFVANDERHPQREEI 526
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 149/307 (48%), Gaps = 21/307 (6%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ ++++ ++ + G + DA+ +FD + RN VSWN +IAG+ S E+A +LF M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 126 ERD-----NFSWALMITCYTRKGKLEKARELLELV---PDKLESACWNSVIAGYAKKGQF 177
RD +FS+A + + G LE+ + + + +KL + N+++ YAK G
Sbjct: 255 -RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGF 233
DA K+F+ + +D+VS+NS+L Y Q+G A+ +FE+M N +S+ +++
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 234 VNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-W 288
+SG L +E + P A +VT++ R G + A R + MP + + W
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIW 433
Query: 289 NAMIAAYAQDLQID---EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK 345
A++ A + A + +L D + N Y G+ ++A V +M
Sbjct: 434 KALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKES 493
Query: 346 DIAAETA 352
+ E A
Sbjct: 494 GVKKEPA 500
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 169/360 (46%), Gaps = 67/360 (18%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G++ A + + ++V N++++++AK G + +AR++F+KM QR+ V+W T+I+GY
Sbjct: 79 GRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 110 HNSMVEEASKLFDVM------PERDNFSWAL----------------------------- 134
+ +A F+ M P S +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 135 ----MITCYTRKGKLEKARELLELVPDKLES---ACWNSVIAGYAKKGQFSDAEKVFNLM 187
++ YTR G ++ A +LV D LES WN++IAG+A++ A ++F M
Sbjct: 198 VGSALLDLYTRYGLMDDA----QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 188 PVKD-----LVSYNSMLAGYTQNG--KMGLALH-FFEKMAEKNVV-SWNLMVSGFVNSGD 238
++D SY S+ + G + G +H + K EK V + N ++ + SG
Sbjct: 254 -LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 239 LSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAA 294
+ AR++F+++ + VSW ++L +A+HG EA F+ M N +S+ +++ A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 295 YAQDLQIDEAVKLFIKLPHKDGV---SWS--TIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ +DE + +L KDG+ +W T+++ R G L+ A +MP + AA
Sbjct: 373 CSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 174/374 (46%), Gaps = 26/374 (6%)
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
+G + A++ F +K + ++ G + H + + ++V N +++ +
Sbjct: 52 EGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHA------HILQSIFRHDIVMGNTLLNMY 105
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWN 289
G L AR++FEK+P + V+W T++ G+++H + +A F+ M N + +
Sbjct: 106 AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 290 AMIAAYAQDLQIDEAVKLF---IKLPHKDGVS-WSTIINGYIRVGKLDEAREVYNQMPCK 345
++I A A + + +L +K V S +++ Y R G +D+A+ V++ + +
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRD-----TICWNSMIA-----GFCQSGRMD 395
+ + AL++G + ++A ++F + RD + S+ GF + G+
Sbjct: 226 NDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 396 EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
A + + K + + NT++ YA++G + A IF + +R++VSWNSL+T + Q+
Sbjct: 285 HAY-MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A+ M R G +P++ +F G +E + K G + + +
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 516 LIAMYAKCGRVESA 529
++ + + G + A
Sbjct: 404 VVDLLGRAGDLNRA 417
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 161/326 (49%), Gaps = 50/326 (15%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM------P 188
++ Y + G LE+AR++ E +P + + W ++I+GY++ + DA FN M P
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQR-DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP 159
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
+ +S A + G G LH F + GF ++ + SA
Sbjct: 160 NEFTLSSVIKAAAAERRGCCGHQLHGF------------CVKCGFDSNVHVGSA------ 201
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+L + R+G + +A+ +FD++ +N VSWNA+IA +A+ ++A++LF
Sbjct: 202 -----------LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 309 IKLPHKDG-----VSWSTIINGYIRVGKLDEAREVYNQM---PCKDIA-AETALMSGLIQ 359
+ +DG S++++ G L++ + V+ M K +A A L+ +
Sbjct: 251 QGML-RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTM 415
+G + +A K+F++L+ RD + WNS++ + Q G EA+ F +M + N +S+ ++
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIV 441
++ + +G +D + ++ M++ IV
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKDGIV 395
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G +H +IL+S + +D+ + N L+ MYAKCG +E A +VF + D ++W +LISGY+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGML--SACSHAGLANQGLDLF--KCMVEDFAIE 609
+ +A F QML P++ T ++ +A G L F KC +
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC-----GFD 193
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACR---VHKNLEIGEF 665
S L+DL R G +++A V ++ + + W +L+ G R K LE+ F
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHARRSGTEKALEL--F 250
Query: 666 AAMRLSELEPHNASNYITL-----SNMHAEAGRW 694
M P + S Y +L S E G+W
Sbjct: 251 QGMLRDGFRPSHFS-YASLFGACSSTGFLEQGKW 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 24/210 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE---R 127
N+++ ++AK+G I DAR++FD++++R++VSWN+++ Y + +EA F+ M R
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 128 DN-FSWALMITCYTRKGKLEKARELLELV-PDKLESACWN--SVIAGYAKKGQFSDAEKV 183
N S+ ++T + G L++ EL+ D + W+ +V+ + G + A +
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 184 FNLMPVKDLVS-YNSMLAG--YTQNGKMG--LALHFFEKMAE---KNVVSWNLMVSGFVN 235
MP++ + + ++L +N ++G A H FE + +V+ +N+ SG
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG--- 477
Query: 236 SGDLSSARQLFEK-----IPNPNAVSWVTM 260
G + A ++ +K + A SWV +
Sbjct: 478 -GRWNDAARVRKKMKESGVKKEPACSWVEI 506
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-- 94
F N + K G + +A ++F +++V++NS+++ +A++G +A F++M
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 95 --QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKA 148
+ N +S+ +++ H+ +++E +++M + + + + ++ R G L +A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 149 RELLELVPDKLESACWNSVIAGY-----AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
+E +P + +A W +++ + G ++ AE VF L P D + + Y
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDP-DDPGPHVILYNIYA 475
Query: 204 QNGKMGLALHFFEKMAEKNV 223
G+ A +KM E V
Sbjct: 476 SGGRWNDAARVRKKMKESGV 495
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 249/465 (53%), Gaps = 39/465 (8%)
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-HKDGV 317
+++ + + G + AR++FD MP +NV +WNAMI Y + A LF ++ ++ V
Sbjct: 86 SLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTV 145
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+W +I GY + ++++ARE++ +MP ++
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMP-----------------------------FELKN 176
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
W+ M+ + + +M++A F +P+KN+ W+ M+SGY + G + A IF +
Sbjct: 177 VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA 236
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
R++V WN+LI G+ QN DA+ + M EG +PD T VG ++
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H I G + FVSNALI MYAKCG +E+A VF +I + NS+IS A++G
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM-VEDFAIEPLAEHYS 616
EA + F M S ++ PD++TFI +L+AC H G +GL +F M +D ++P +H+
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD--VKPNVKHFG 414
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPH 676
CL+ LLGR G+L+EA+ +V+ M VK N + G+LLGAC+VH + E+ E M++ E
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGS 473
Query: 677 NASNY-----ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
++Y ++SN++A RW+ E LRV M + K PG S
Sbjct: 474 ITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 210/434 (48%), Gaps = 44/434 (10%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV-KDLV 193
+I+ Y + G + AR++ + +P++ A WN++I GY G A +F + V ++ V
Sbjct: 87 LISMYGKCGCVVSARKVFDEMPER-NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTV 145
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMA--EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
++ M+ GY + ++ A FE+M KNV +W++M+ +VN+ + AR+ FE IP
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPE 205
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
NA W M+ G+ R G + EAR +F + +++V WN +IA YAQ+ D+A+ F +
Sbjct: 206 KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM 265
Query: 312 P----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA----AETALMSGLIQTGRV 363
D V+ S+I++ + G+LD REV++ + + I AL+ + G +
Sbjct: 266 QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGY 419
+ A+ +F +S R C NSMI+ G+ EAL++F M K + +++ +++
Sbjct: 326 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 420 AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-------- 471
G + IF M+ +++ N +F L + L+GR GK
Sbjct: 386 VHGGFLMEGLKIFSEMKTQDVKP----------NVKHFGCL--IHLLGRSGKLKEAYRLV 433
Query: 472 -----KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA---MYAKC 523
KP+ + ++ Q+ + I +G I + + N L + +YA
Sbjct: 434 KEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHT 493
Query: 524 GRVESAEQVFTAIE 537
R ++AE + +E
Sbjct: 494 ERWQTAEALRVEME 507
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 167/299 (55%), Gaps = 11/299 (3%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D++ +S+++ Y + G + A F++M E+NV +WN M+ G++++GD A LFE+I
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 251 -NPNAVSWVTMLCGFARHGKITEARRLFDSMP--CKNVVSWNAMIAAYAQDLQIDEAVKL 307
N V+W+ M+ G+ + +I +AR LF+ MP KNV +W+ M+ Y + ++++A K
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 308 FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
F +P K+ WS +++GY R+G + EAR ++ ++ +D+ L++G Q G D+A
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAI 259
Query: 368 KMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGY 419
F + D + +S+++ QSGR+D ++ + + N N +I Y
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 420 AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
A+ G +++A ++F+++ R++ NS+I+ + +AL+ M KPD+ TF
Sbjct: 320 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 196/385 (50%), Gaps = 19/385 (4%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDN 129
+S+IS++ K G + AR++FD+M +RN+ +WN MI GY+ N AS LF ++ R+
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKLESA-CWNSVIAGYAKKGQFSDAEKVFNLMP 188
+W MI Y ++ ++EKAREL E +P +L++ W+ ++ Y + DA K F +P
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIP 204
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
K+ ++ M++GY + G + A F ++ +++V WN +++G+ +G A F
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 249 IPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQ 300
+ P+AV+ ++L A+ G++ R + + + N NA+I YA+
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 301 IDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSG 356
++ A +F + + +++I+ GK EA E+++ M D+ + A+++
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 357 LIQTGRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVS 411
+ G + E K+F+++ T+D + +I +SG++ EA L ++M K N
Sbjct: 385 CVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTV 444
Query: 412 WNTMISGYAQAGQMDSAENIFQAME 436
++ + AE + + +E
Sbjct: 445 LGALLGACKVHMDTEMAEQVMKIIE 469
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 209/424 (49%), Gaps = 34/424 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ-RNLVSWNTMI 105
GK G V A +VF +N+ T+N+MI + NG A LF+++S RN V+W MI
Sbjct: 92 GKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMI 151
Query: 106 AGYLHNSMVEEASKLFDVMP-ERDNF-SWALMITCYTRKGKLEKARELLELVPDKLESAC 163
GY +E+A +LF+ MP E N +W++M+ Y K+E AR+ E +P+K +
Sbjct: 152 KGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFV 210
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA---- 219
W+ +++GY + G +A +F + +DLV +N+++AGY QNG A+ F M
Sbjct: 211 WSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGY 270
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARR 275
E + V+ + ++S SG L R++ I + N ++ +A+ G + A
Sbjct: 271 EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATS 330
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGK 331
+F+S+ ++V N+MI+ A + EA+++F + D +++ ++ + G
Sbjct: 331 VFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGF 390
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAG 387
L E +++++M +D+ LI ++G++ EA ++ ++ + + G
Sbjct: 391 LMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLG 450
Query: 388 FCQSGRMDEALDLFRQMPK--------KNSVSWNTMIS---GYAQAGQMDSAENIFQAME 436
C+ MD ++ Q+ K NS S N + S YA + +AE + ME
Sbjct: 451 ACKV-HMDT--EMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEME 507
Query: 437 ERNI 440
+R +
Sbjct: 508 KRGL 511
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G LH +K G +D+ V ++LI+MY KCG V SA +VF + ++ +WN++I GY
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
NG A+ A F+++ V + VT+I M+
Sbjct: 124 SNGDAVLASGLFEEI---SVCRNTVTWIEMI 151
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 264/498 (53%), Gaps = 15/498 (3%)
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIIN-----GYIRVGKLD 333
+N NA+I ++ + + +V+ FI + D +++ ++ G+ +G+
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFC 389
A + N + C D +L+ +TG++ A ++F + R + WN +I G+C
Sbjct: 149 HAATLKNFVDC-DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 390 QSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITG 449
++ M A LFR MP++NS SW+T+I GY +G+++ A+ +F+ M E+N+VSW +LI G
Sbjct: 208 RAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLING 267
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
F Q Y A+ + M +G KP++ T G ++H YIL +G D
Sbjct: 268 FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLD 327
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
+ AL+ MYAKCG ++ A VF+ + D++SW ++I G+A++G +A + F+QM+
Sbjct: 328 RAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
PD+V F+ +L+AC ++ + GL+ F M D+AIEP +HY +VDLLGR G+L
Sbjct: 388 SGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 630 EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHA 689
EA +V M + + W +L AC+ HK E + L EL+P +YI L HA
Sbjct: 448 EAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHA 507
Query: 690 EAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIG-IS 748
G ++VE+ R+ ++ + + G S+IE+ Q+ F + D + I + L IS
Sbjct: 508 SKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIIS 567
Query: 749 ADIRDKFNVFNMLSVFDI 766
I+ +N S+ DI
Sbjct: 568 LAIQKGYNPGADWSIHDI 585
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 169/368 (45%), Gaps = 50/368 (13%)
Query: 89 LFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITC---Y 139
+F +RN N +I G N+ E + + F +M P+R F + L +
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 140 TRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
G+ A L V +S S++ YAK GQ A +VF P
Sbjct: 142 RWLGRALHAATLKNFV--DCDSFVRLSLVDMYAKTGQLKHAFQVFEESP----------- 188
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
+++ +++++ WN++++G+ + D+ A LF +P N+ SW T
Sbjct: 189 ----------------DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWST 232
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----D 315
++ G+ G++ A++LF+ MP KNVVSW +I ++Q + A+ + ++ K +
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFN 371
+ + +++ + G L ++ + I + A+ + L+ + G +D A+ +F+
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDS 427
++ +D + W +MI G+ GR +A+ FRQM K + V + +++ + ++D
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 428 AENIFQAM 435
N F +M
Sbjct: 413 GLNFFDSM 420
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
A +F + +N +++++I + +G+++ A+QLF+ M ++N+VSW T+I G+
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 115 EEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSV 167
E A + M E+ + ++ A +++ ++ G L + + D KL+ A ++
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNV 223
+ YAK G+ A VF+ M KD++S+ +M+ G+ +G+ A+ F +M + +
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFD 278
V + +++ +NS ++ F+ + P +V ++ R GK+ EA L +
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 279 SMPC-KNVVSWNAMIAA 294
+MP ++ +W A+ A
Sbjct: 455 NMPINPDLTTWAALYRA 471
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
D + +IF+ EERN N+LI G +N+ + +++ +LM R G KPD+ TF
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA----IECVDL 541
+G LH LK+ D FV +L+ MYAK G+++ A QVF I+ +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
+ WN LI+GY A F+ M + ++ ++ +G N+ LF+
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGAC 654
M E + ++ L++ + G E A + M +K N ++L AC
Sbjct: 253 MPEKNVVS-----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWN 102
K G+++ A VFSN HK+++++ +MI +A +G+ A Q F +M + + V +
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 103 TMIAGYLHNSMVEEASKLFDVMP-----ERDNFSWALMITCYTRKGKLEKARELLELVPD 157
++ L++S V+ FD M E + L++ R GKL +A EL+E +P
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKV 183
+ W ++ + AE V
Sbjct: 459 NPDLTTWAALYRACKAHKGYRRAESV 484
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 261/467 (55%), Gaps = 14/467 (2%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
+++IAA + I+ L K+ ++ G ++ Y+R+G A +++++MP
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT------ICWNSMIAGFCQSGRMDEAL 398
+D+ + +L+SG G + + ++ +++ + + + SMI+ G +E
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 399 DLFRQMPKKNSVS----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+ + K + N I+ Y + G + S+ +F+ + +N+VSWN++I LQN
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
L L + R G +PDQ+TF ++ +H I+ G+ + ++
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ +Y+K GR+E + VF I D ++W ++++ YA +G+ +A K F+ M+ + P
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D VTF +L+ACSH+GL +G F+ M + + I+P +HYSC+VDLLGR G L++A+ +
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
++ M ++ ++G+WG+LLGACRV+K+ ++G AA RL ELEP + NY+ LSN+++ +G W
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLW 454
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQ 741
++ R+R LM+ K + GCS+IE N+I F+ D E IQ
Sbjct: 455 KDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQ 501
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 150/302 (49%), Gaps = 34/302 (11%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----- 219
+ ++ Y + G AEK+F+ MP +DLVS+NS+++GY+ G +G +M
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 220 -EKNVVSWNLMVSGFVNSGDLSSAR---------QLFEKIPNPNA-VSWVTMLCGFARHG 268
N V++ M+S V G R + E++ NA ++W + + G
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINW------YGKTG 183
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF---IKLPHK-DGVSWSTIIN 324
+T + +LF+ + KN+VSWN MI + Q+ ++ + F ++ H+ D ++ ++
Sbjct: 184 DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLR 243
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC 380
+G + A+ ++ + + + + L+ + GR++++S +F+++++ D++
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA 303
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAME 436
W +M+A + G +A+ F M + V++ +++ + +G ++ ++ F+ M
Sbjct: 304 WTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMS 363
Query: 437 ER 438
+R
Sbjct: 364 KR 365
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 202/452 (44%), Gaps = 48/452 (10%)
Query: 60 SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVE 115
S+ +H +S+I+ I R L K+ S R+ + ++ YL
Sbjct: 24 SSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDV 83
Query: 116 EASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV--------PDKLE-----SA 162
A KLFD MPERD SW +I+ Y+ +G L K E+L + P+++ SA
Sbjct: 84 CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
C V G ++G+ V ++++ N+ + Y + G + + FE ++ KN
Sbjct: 144 C---VYGGSKEEGRCIHG-LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKN 199
Query: 223 VVSWNLMVSGFVNSGDLSSARQLF---EKIPN-PNAVSWVTML--C---GFARHGKITEA 273
+VSWN M+ + +G F ++ + P+ +++ +L C G R +
Sbjct: 200 LVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHG 259
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLD 333
+F ++ A++ Y++ +++++ +F ++ D ++W+ ++ Y G
Sbjct: 260 LIMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGR 318
Query: 334 EAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSM 384
+A + + M I+ + T L++ +G V+E F +S R I ++ M
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 385 IAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGY-----AQAGQMDSAENIFQAMEER 438
+ +SG + +A L ++MP + +S W ++ Q G +AE +F+ +E R
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT-KAAERLFE-LEPR 436
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+ ++ L + + L+ DA + LM ++G
Sbjct: 437 DGRNYVMLSNIYSASGLWKDASRIRNLMKQKG 468
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 20/298 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD----VMPE 126
N+ I+ + K G ++ + +LF+ +S +NLVSWNTMI +L N + E+ F+ V E
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDKLESA--CWNSVIAG-YAKKGQFSDAEKV 183
D ++ ++ G + A+ + L+ S C + + Y+K G+ D+ V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDL 239
F+ + D +++ +MLA Y +G A+ FE M + V++ +++ +SG +
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 240 SSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIA 293
+ FE + +P + M+ R G + +A L MP + W A++
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 294 A--YAQDLQI-DEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
A +D Q+ +A + +L +DG ++ + N Y G +A + N M K +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 198/699 (28%), Positives = 332/699 (47%), Gaps = 74/699 (10%)
Query: 49 LGKVEEAVR----VFSNTIHKNLVTYNSMIS----------VFAKNGKISDARQLFDKMS 94
L +E +R V IH++L+ + +S ++A ++ AR +FD++
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 95 QR--NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL 152
N ++W+ MI Y N E+A L+ M + + T YT L+ L
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKM-----LNSGVRPTKYTYPFVLKACAGLR 117
Query: 153 ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ KL I + F+ D+ +++ Y + G++ +A+
Sbjct: 118 AIDDGKL--------IHSHVNCSDFA-----------TDMYVCTALVDFYAKCGELEMAI 158
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARH 267
F++M ++++V+WN M+SGF L+ LF + +PN + V M R
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218
Query: 268 GKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
G + E + + ++V ++ YA+ I A ++F K+ V+WS +I
Sbjct: 219 GALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMI 278
Query: 324 NGYIRVGKLDEAREVYNQMPCKD-IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
GY+ + EA EV+ QM D +A T + GLI G F LS +
Sbjct: 279 GGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMG-----CARFGDLSGGRCVHCY 333
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
++ AGF LDL Q NT+IS YA+ G + A F + ++++S
Sbjct: 334 AVKAGF--------ILDLTVQ---------NTIISFYAKYGSLCDAFRQFSEIGLKDVIS 376
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
+NSLITG + N ++ + M G +PD +T G+ H Y +
Sbjct: 377 YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
GY + + NAL+ MY KCG+++ A++VF + D++SWN+++ G+ ++G EA
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAIEPLAEHYSCLVDL 621
F M V PD+VT + +LSACSH+GL ++G LF M DF + P +HY+C+ DL
Sbjct: 497 LFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDL 556
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY 681
L R G L+EA++ V M + + + G+LL AC +KN E+G + ++ L S
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-L 615
Query: 682 ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEV 720
+ LSN ++ A RWE+ R+R++ + + K PG SW++V
Sbjct: 616 VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 166/380 (43%), Gaps = 75/380 (19%)
Query: 46 LGKLGKVEEAVRV--------FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
LG+ G + E V FSN +LV ++ V+AK+ I AR++FD ++N
Sbjct: 215 LGRAGALREGKAVHGYCTRMGFSN----DLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSW------ALMITCYTRKGKLEKAREL 151
V+W+ MI GY+ N M++EA ++F M DN + L++ R G L R +
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 152 LELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
L+ N++I+ YAK G DA + F+ + +KD++SYNS++ G N +
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 209 GLALHFFEKMAEK---------------------------------------NVVSWNLM 229
+ F +M N N +
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV---- 285
+ + G L A+++F+ + + VSW TML GF HG EA LF+SM V
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKL--------PHKDGVSWSTIINGYIRVGKLDEARE 337
V+ A+++A + +DE +LF + P D ++ + + R G LDEA +
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID--HYNCMTDLLARAGYLDEAYD 568
Query: 338 VYNQMPCK-DIAAETALMSG 356
N+MP + DI L+S
Sbjct: 569 FVNKMPFEPDIRVLGTLLSA 588
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 253/471 (53%), Gaps = 24/471 (5%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
P P VS+ A + + + N + N++I AYA + A+ +F
Sbjct: 85 PEPKTVSY---------------AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFR 129
Query: 310 KL---P-HKDGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTG 361
++ P D S++ ++ +E R+++ D+ E L++ ++G
Sbjct: 130 EMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSG 189
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQ 421
+ A K+ +++ RD + WNS+++ + + G +DEA LF +M ++N SWN MISGYA
Sbjct: 190 YFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAA 249
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL-VLMGREGKKPDQSTFXX 480
AG + A+ +F +M R++VSWN+++T + Y + L+ ++ +KPD T
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
G +H YI K G + F++ AL+ MY+KCG+++ A +VF A D
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+ +WNS+IS +++G +A + F +M+ E P+ +TFIG+LSAC+H G+ +Q LF+
Sbjct: 370 VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE 429
Query: 601 CMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
M + +EP EHY C+VDLLGRMG++EEA +V + + L SLLGAC+ L
Sbjct: 430 MMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQL 489
Query: 661 EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
E E A RL EL ++S Y +SN++A GRWE+V R MR +R +
Sbjct: 490 EQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 182/370 (49%), Gaps = 45/370 (12%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMI 136
+S A + +++ N + N++I Y ++S E A +F V P++ +F++ L
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLK- 148
Query: 137 TCYTRKGKLEKARELLEL-VPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
C G E+ R++ L + L + + N+++ Y + G F A KV + MPV+D V
Sbjct: 149 ACAAFCG-FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV 207
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
S+NS+L+ Y + G + A F++M E+NV SWN M+SG+ +G + A+++F+ +P +
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD 267
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
VSW M+ +A G E +F+ M +D++ +
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKM--------------------LDDSTE------K 301
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKM 369
DG + ++++ +G L + V+ + I E L + L+ + G++D+A ++
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQM 425
F S RD WNS+I+ G +AL++F +M K N +++ ++S G +
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 426 DSAENIFQAM 435
D A +F+ M
Sbjct: 422 DQARKLFEMM 431
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 194/398 (48%), Gaps = 44/398 (11%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L I S VF +N + G+ G E A +V ++ V++NS++S + + G +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKG 143
+AR LFD+M +RN+ SWN MI+GY +V+EA ++FD MP RD SW M+T Y G
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 144 ----KLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
LE ++L+ +K + SV++ A G S E V ++ K + L
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV-HVYIDKHGIEIEGFL 341
Query: 200 AG-----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---- 250
A Y++ GK+ AL F ++++V +WN ++S G A ++F ++
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
PN ++++ +L G + +AR+LF+ M + Y + I+
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMS-----------SVYRVEPTIEH------- 443
Query: 311 LPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA-ETALMSGLIQTGRVDEASKM 369
+ +++ R+GK++EA E+ N++P + + +L+ + G++++A ++
Sbjct: 444 --------YGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERI 495
Query: 370 FN---QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
N +L+ RD+ + M + GR ++ +D R M
Sbjct: 496 ANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYA---KCGRVESAEQVFTAIECVDLISWNSLISGYA 552
Q H ++LK+G +D F ++ L+A A + V A + I + + NS+I YA
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS-----HAGLANQGLDLFKCMVEDFA 607
+ A F++ML V PD+ +F +L AC+ G GL + +V D
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVF 176
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
+E + LV++ GR G E A V+ M V+ +A W SLL A + K L + E A
Sbjct: 177 VE------NTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA-YLEKGL-VDEARA 227
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
+ E+E N ++ + + +A AG +E + +
Sbjct: 228 L-FDEMEERNVESWNFMISGYAAAGLVKEAKEV 259
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 273/534 (51%), Gaps = 39/534 (7%)
Query: 238 DLSSARQLFEK---IPNPNAVSWVTMLCGFA--RHGKITEARRLFDSMPCKNVVSWNAMI 292
DLS +F K + + A + + C + H + A ++F+ MP +N SWN +I
Sbjct: 38 DLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTII 97
Query: 293 AAYAQDLQIDE-----AVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQM 342
+++ DE A+ LF ++ + V ++ +++ + GK+ E ++++
Sbjct: 98 RGFSES---DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 343 PCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
+ +MS L++ G + +A +F + I M+ + R E
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK-----NIIEKDMVVMTDRRKRDGEI- 208
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
V WN MI GY + G +A +F M +R++VSWN++I+G+ N + D
Sbjct: 209 -----------VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A++ M + +P+ T ++G LH Y SG D + +ALI
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
MY+KCG +E A VF + ++I+W+++I+G+A++G A +A F +M V P V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+I +L+ACSH GL +G F MV +EP EHY C+VDLLGR G L+EA + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 639 DVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVE 698
+K + +W +LLGACR+ N+E+G+ A L ++ PH++ Y+ LSNM+A G W EV
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 699 RLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
+R+ M++K K PGCS I++ + F+ +D + + I +L+ IS +R
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 187/388 (48%), Gaps = 42/388 (10%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE--ASKLF-----DVMPERDNFSWALMITC 138
A ++F++M QRN SWNT+I G+ + + A LF D E + F++ ++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 139 YTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVF-------NLMP 188
+ GK+++ +++ L + ++++ Y G DA +F +++
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 189 VKD-------LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+ D +V +N M+ GY + G A F+KM +++VVSWN M+SG+ +G
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 242 ARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLF----DSMPCKNVVSWNAMIA 293
A ++F ++ PN V+ V++L +R G + L DS + V +A+I
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI----AA 349
Y++ I++A+ +F +LP ++ ++WS +ING+ G+ +A + + +M + A
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQM 404
L++ G V+E + F+Q+ + D + + M+ +SG +DEA + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 405 P-KKNSVSWNTMISGYAQAGQMDSAENI 431
P K + V W ++ G ++ + +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRV 465
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE 126
+V +N MI + + G AR LFDKM QR++VSWNTMI+GY N ++A ++F M +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 127 ---RDNF-SWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSD 179
R N+ + ++ +R G LE L D +++ +++I Y+K G
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A VF +P ++++++++M+ G+ +G+ G A+ F KM + V
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV---------------- 371
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAA 294
P+ V+++ +L + G + E RR F M + + M+
Sbjct: 372 -----------RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDL 420
Query: 295 YAQDLQIDEAVKLFIKLPHK-DGVSWSTIINGYIRVGKLDEAREVYN---QMPCKDIAAE 350
+ +DEA + + +P K D V W ++ G ++ + V N M D A
Sbjct: 421 LGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAY 480
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRD 377
AL + G E S+M ++ +D
Sbjct: 481 VALSNMYASQGNWSEVSEMRLRMKEKD 507
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 246/453 (54%), Gaps = 13/453 (2%)
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
Y + L++AR+V ++MP K++ + TA++S QTG EA +F ++ D
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWN---------TMISGYAQAGQMDSAENIFQAME 436
A S L L +Q+ V WN +++ YA+AGQ+ A IF+ +
Sbjct: 157 ATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
ER++VS ++I G+ Q L +AL+ + EG P+ T+ G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
H ++L+ + N+LI MY+KCG + A ++F + ISWN+++ GY+ +G
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 557 AIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAIEPLAEH 614
E + F+ M E+ V PD VT + +LS CSH + + GL++F MV ++ +P EH
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELE 674
Y C+VD+LGR GR++EAF ++ M K AG+ GSLLGACRVH +++IGE RL E+E
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGR 734
P NA NY+ LSN++A AGRW +V +R +M K K PG SWI+ + + F ++D
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515
Query: 735 LRPETIQIILIGISADIRDKFNVFNMLSV-FDI 766
R E + + IS ++ V ++ V +D+
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV 548
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 149/340 (43%), Gaps = 69/340 (20%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDN--- 129
++ + K + DAR++ D+M ++N+VSW MI+ Y EA +F M D
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 130 -FSWALMITCYTRKGKLEKARELLELVPDKLESACWN---------SVIAGYAKKGQFSD 179
F++A ++T R L +++ L+ WN S++ YAK GQ +
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVK------WNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW--------- 226
A ++F +P +D+VS +++AGY Q G AL F ++ + N V++
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 227 --------------------------NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTM 260
N ++ + G+LS AR+LF+ +P A+SW M
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 261 LCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKL---- 311
L G+++HG E LF M + + V+ A+++ + D + +F +
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 312 -PHKDGVS-WSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
K G + I++ R G++DEA E +MP K A
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG 426
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 52/329 (15%)
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
P +L + + + +AR++ D MP KNVVSW AMI+ Y+Q EA+ +F ++
Sbjct: 85 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 312 PHKDG------------------------------VSW---------STIINGYIRVGKL 332
DG V W S++++ Y + G++
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 204
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGF 388
EARE++ +P +D+ + TA+++G Q G +EA +MF++L + + + + S++
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 389 CQSGRMDEALD-----LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSW 443
+D L R++P +V N++I Y++ G + A +F M ER +SW
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
N+++ G+ ++ L + L+ LM E + KPD T G + + ++
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 503 KSGYINDLFVSN--ALIAMYAKCGRVESA 529
Y + ++ M + GR++ A
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
V NS+I +++K G +S AR+LFD M +R +SWN M+ GY + + E +LF +M
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 268 bits (686), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 177/619 (28%), Positives = 306/619 (49%), Gaps = 26/619 (4%)
Query: 148 ARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM-----PVKDLVSYNSMLAGY 202
AR + E + + WNS+++GY+K F D +VF + V D ++ +++ Y
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 203 TQNGK--MGLALHFF--EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV 258
G+ +G +H + +VV + +V + ++ Q+F+++P + SW
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 259 TMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK 314
T++ F + G+ +A LF M N VS I+A ++ L ++ ++ K K
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 315 ----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
D S +++ Y + L+ AREV+ +MP K + A +++ G + G ++
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 371 NQL---STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN-----TMISGYAQA 422
N++ TR + + I C R ++ V+ + ++I Y +
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
G+ + AE +F ++ SWN +I+ ++ +F A++ M G KPD TF
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+ G Q+H I +S D + +AL+ MY+KCG + A ++F +I D++
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SW +IS Y +G EA F +M + PD VT + +LSAC HAGL ++GL F M
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM-DVKANAGLWGSLLGACRVHKNLE 661
+ IEP+ EHYSC++D+LGR GRL EA+ +++ + NA L +L AC +H
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
+G+ A L E P +AS Y+ L N++A W+ R+R+ M++ K PGCSWIE+
Sbjct: 598 LGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Query: 722 NQIQCFLSDDSGRLRPETI 740
+++ F ++D LR E +
Sbjct: 658 DKVCHFFAEDRSHLRAENV 676
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 179/390 (45%), Gaps = 44/390 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
++V +S++ ++AK ++ Q+FD+M +R++ SWNT+I+ + + E+A +LF M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 126 ----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFS 178
E ++ S + I+ +R LE+ +E+ K L+ ++++ Y K
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
A +VF MP K LV++NSM+ GY G + +M ++ G
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM----------IIEG------ 304
Query: 239 LSSARQLFEKIPNPNAVSWVTMLCGFAR---HGKITEARRLFDSMPCKNVVSWNAMIAAY 295
P+ ++ + M C +R HGK + S+ ++ ++I Y
Sbjct: 305 ---------TRPSQTTLTSILMACSRSRNLLHGKFIHG-YVIRSVVNADIYVNCSLIDLY 354
Query: 296 AQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC----KDIAAET 351
+ + + A +F K SW+ +I+ YI VG +A EVY+QM D+ T
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
+++ Q +++ ++ +S D + ++++ + + G EA +F +PKK
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+ VSW MIS Y GQ A F M++
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 201/464 (43%), Gaps = 91/464 (19%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
M H L + S V + + K E +++VF +++ ++N++IS F ++G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 82 KISDARQLFDKMS----QRNLVSWNTMIAGY-----------LHNSMVEEASKLFDVMPE 126
+ A +LF +M + N VS I+ +H V++ +L
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL------ 241
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNL 186
D + + ++ Y + LE ARE+ + +P K A WNS+I GY KG ++ N
Sbjct: 242 -DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA-WNSMIKGYVAKGDSKSCVEILNR 299
Query: 187 MPVK---------------------------------------DLVSYNSMLAGYTQNGK 207
M ++ D+ S++ Y + G+
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG 263
LA F K + SWN+M+S +++ G+ A ++++++ + P+ V++ ++L
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 264 FAR----------HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
++ H I+E+R D + +A++ Y++ EA ++F +P
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELL------LSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKM 369
KD VSW+ +I+ Y G+ EA +++M D A++S G +DE K
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 370 FNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
F+Q+ ++ I ++ MI ++GR+ EA ++ +Q P+ +
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 143/306 (46%), Gaps = 21/306 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V + ++ ++ S+I ++ K G+ + A +F K + SWN MI+ Y+ +A
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKA 394
Query: 118 SKLFDVM----PERDNFSWALMITCYTRKGKLEKAREL-LELVPDKLES--ACWNSVIAG 170
+++D M + D ++ ++ ++ LEK +++ L + +LE+ ++++
Sbjct: 395 VEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDM 454
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSW 226
Y+K G +A ++FN +P KD+VS+ M++ Y +G+ AL+ F++M + + V+
Sbjct: 455 YSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTL 514
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++S ++G + + F ++ + P + M+ R G++ EA + P
Sbjct: 515 LAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
Query: 282 --CKNVVSWNAMIAAYAQDLQI---DEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
N + + +A L+ D +L ++ D ++ + N Y D AR
Sbjct: 575 ETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAAR 634
Query: 337 EVYNQM 342
V +M
Sbjct: 635 RVRLKM 640
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G +EA R+F++ K++V++ MIS + +G+ +A FD+M + L V+
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPDK 158
+++ H +++E K F M + ++ MI R G+L +A E+++ P+
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 159 LESA 162
++A
Sbjct: 577 SDNA 580
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 208/751 (27%), Positives = 357/751 (47%), Gaps = 93/751 (12%)
Query: 86 ARQLFDKMSQRN-LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSW-----ALMITCY 139
A +LFD SQRN S N I+ L + A +F + F L +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 140 TRKGKLEKAREL--LELVPDKLESACW-NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
+G L++ ++ C N+V+ Y K G+F +A +F + D+VS+N
Sbjct: 87 ACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWN 146
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP 252
++L+G+ N +AL+F +M VV +++ +S V S QL +
Sbjct: 147 TILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203
Query: 253 N-------AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQID-EA 304
S++TM ++R G ARR+FD M K+++SWN++++ +Q+ EA
Sbjct: 204 GLESDLVVGNSFITM---YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 305 VKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET------ALM 354
V +F + + D VS++++I L AR+++ C E+ LM
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL--CIKRGYESLLEVGNILM 318
Query: 355 SGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSV 410
S + G ++ +F+Q+S R+ + W +MI S D+A+ +F M N V
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEV 373
Query: 411 SW-----------------------------------NTMISGYAQAGQMDSAENIFQAM 435
++ N+ I+ YA+ ++ A+ F+ +
Sbjct: 374 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV-- 493
R I+SWN++I+GF QN +ALK + E P++ TF V
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQ 492
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G + H ++LK G + VS+AL+ MYAK G ++ +E+VF + + W S+IS Y+
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
+G F +M+ E V PD VTF+ +L+AC+ G+ ++G ++F M+E + +EP E
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 612
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL 673
HYSC+VD+LGR GRL+EA ++ + + S+LG+CR+H N+++G A E+
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 672
Query: 674 EPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN-----QIQCFL 728
+P + +Y+ + N++AE W++ +R MR K K G SWI+V + +Q F
Sbjct: 673 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFS 732
Query: 729 SDDSGRLRPETI--QIILIGISADIRDKFNV 757
S D + + I + +IG+ ++ K V
Sbjct: 733 SGDKSHPKSDEIYRMVEIIGLEMNLEGKVAV 763
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 243/536 (45%), Gaps = 83/536 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM-------VEEASKLFDV 123
N+++ ++ K G+ +A +F+ + ++VSWNT+++G+ N + ++ A +FD
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDA 174
Query: 124 MPERDNFSWALMITCYTRKGKLEKARELLELVPDKLES--ACWNSVIAGYAKKGQFSDAE 181
+S AL C +G L + +V LES NS I Y++ G F A
Sbjct: 175 F----TYSTALSF-CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGL-ALHFFEKMAEKNV----VSWNLMVSGFVNS 236
+VF+ M KD++S+NS+L+G +Q G G A+ F M + V VS+ +++ +
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 237 GDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
DL ARQ+ S + ++ +++ G + + +F M +NVVSW MI
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 293 AAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++ D+AV +F+ + + + V++ +IN ++ E +++
Sbjct: 350 SS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 349 AETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF--- 401
+E ++ + I + +++A K F ++ R+ I WN+MI+GF Q+G EAL +F
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 402 --RQMPKK-------NSVSW----------------------------NTMISGYAQAGQ 424
MP + N++++ + ++ YA+ G
Sbjct: 465 AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGN 524
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
+D +E +F M ++N W S+I+ + + + + M +E PD TF
Sbjct: 525 IDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSN----ALIAMYAKCGRVESAEQVFTAI 536
G ++ +++ + +L S+ ++ M + GR++ AE++ + +
Sbjct: 585 CNRKGMVDKGYEIFNMMIE---VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 209/420 (49%), Gaps = 56/420 (13%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVE-E 116
V + +LV NS I++++++G AR++FD+MS ++++SWN++++G E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 117 ASKLF-DVMP---ERDNFSWALMITCYTRKGKLEKARELLEL-VPDKLES--ACWNSVIA 169
A +F D+M E D+ S+ +IT + L+ AR++ L + ES N +++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM 229
Y+K G + VF+ M +++VS+ +M++ + A+ F M V +
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVT 374
Query: 230 VSGFVNSGDLSSARQLFEK------------IPNPN-AVSWVTMLCGFARHGKITEARRL 276
G +N+ + Q+ E + P+ S++T+ +A+ + +A++
Sbjct: 375 FVGLINA--VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL---YAKFEALEDAKKA 429
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK-----LPHKDGVSWSTIINGY----- 326
F+ + + ++SWNAMI+ +AQ+ EA+K+F+ +P++ ++ +++N
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE--YTFGSVLNAIAFAED 487
Query: 327 --IRVGKLDEAREV---YNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
++ G+ A + N P +AL+ + G +DE+ K+FN++S ++ W
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCP----VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVW 543
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEE 437
S+I+ + G + ++LF +M K+N V++ ++++ + G +D IF M E
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 173/403 (42%), Gaps = 94/403 (23%)
Query: 51 KVEEAVRVFSNTIHKNLVTY----NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
+++E +++ I V+ NS I+++AK + DA++ F+ ++ R ++SWN MI+
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 107 GYLHNSMVEEASKLF-----DVMPERDNFSWALMITCYTRKGKLEKAR----ELLELVPD 157
G+ N EA K+F + MP F L + +++ + LL+L +
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLN 506
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
++++ YAK+G ++EKVFN M K+ + S+++ Y+ +G ++ F K
Sbjct: 507 SC-PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF 277
M ++NV P+ V+++++L R G + + +F
Sbjct: 566 MIKENVA---------------------------PDLVTFLSVLTACNRKGMVDKGYEIF 598
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEARE 337
N MI Y ++ H+ +S +++ R G+L EA E
Sbjct: 599 -----------NMMIEVYN------------LEPSHEH---YSCMVDMLGRAGRLKEAEE 632
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ +++P +++ ++ + R+ KM +++
Sbjct: 633 LMSEVPG---GPGESMLQSMLGSCRLHGNVKMGAKVA----------------------- 666
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+L +M + S S+ M + YA+ + D A I +AM ++N+
Sbjct: 667 -ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV 708
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 179/434 (41%), Gaps = 76/434 (17%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKIS-DARQLFDKMSQRNL 98
N I + G A RVF K+++++NS++S ++ G +A +F M + +
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 99 ----VSWNTMIAGYLHNS-----------------------------------MVEEASK 119
VS+ ++I H + ++E
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 120 LFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL--ESACWNSVIAGYAKKGQF 177
+F M ER+ SW MI+ K + L + D + + +I Q
Sbjct: 333 VFHQMSERNVVSWTTMIS----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Query: 178 SDAEKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
+ K+ L VS NS + Y + + A FE + + ++SWN M+SGF
Sbjct: 389 KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGF 448
Query: 234 VNSGDLSSARQLF-----EKIPNPNAVSWVTMLCGFARHGKITEARRL--------FDSM 280
+G A ++F E +PN V FA + + +R +S
Sbjct: 449 AQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSC 508
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYN 340
P VVS +A++ YA+ IDE+ K+F ++ K+ W++II+ Y G + +++
Sbjct: 509 P---VVS-SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 341 QMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQS 391
+M +++A + ++++ + G VD+ ++FN + + ++ M+ ++
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRA 624
Query: 392 GRMDEALDLFRQMP 405
GR+ EA +L ++P
Sbjct: 625 GRLKEAEELMSEVP 638
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN----LVSWN 102
K G ++E+ +VF+ KN + S+IS ++ +G LF KM + N LV++
Sbjct: 520 AKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFL 579
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPD 157
+++ MV++ ++F++M E N ++ M+ R G+L++A EL+ VP
Sbjct: 580 SVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPG 639
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNL-MPVKDLV--SYNSMLAGYTQNGKMGLALHF 214
+ S++ G KV L M +K + SY M Y + + A
Sbjct: 640 GPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEI 699
Query: 215 FEKMAEKNV-----VSW--------NLMVSGFVNSGDLSSAR 243
+ M +KNV SW +L + GF +SGD S +
Sbjct: 700 RKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGF-SSGDKSHPK 740
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 266/519 (51%), Gaps = 47/519 (9%)
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD--GVSWSTIINGY 326
++ +AR++FD MP K+ + WN MI+ Y ++ E++++F L ++ + +T+++
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 327 IRVGKLDEAR---EVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTI 379
V +L E R ++++ + +++G I + G++ S +F + D +
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQM----------------P----------------KK 407
+N+MI G+ +G + +L LF+++ P K
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 408 NSVSW----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
N +S + + Y++ +++SA +F E+++ SWN++I+G+ QN L DA+
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M + P+ T +G +H+ + + + + ++VS ALI MYAKC
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + A ++F + + ++WN++ISGY L+G EA F +ML+ + P VTF+ +L
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
ACSHAGL +G ++F M+ + EP +HY+C+VD+LGR G L+ A + M ++
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+ +W +LLGACR+HK+ + + +L EL+P N ++ LSN+H+ + + +R
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
+ ++ K PG + IE+ F S D P+ +I
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPHVFTSGDQS--HPQVKEI 685
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 203/393 (51%), Gaps = 25/393 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPER-D 128
++++ ++ K ++ DAR++FD+M +++ + WNTMI+GY N M E+ ++F D++ E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLESACWNS--VIAG----YAKKGQFSDAEK 182
++ +L++ R +++ ++ C++ V+ G Y+K G+
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-EKMAEKNVVSWNLMVSGFVNSGDLSS 241
+F D+V+YN+M+ GYT NG+ L+L F E M + + +VS SG L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 242 ARQLFEKIPNPNAVSWVTMLCG----FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
+ N +S ++ +++ +I AR+LFD P K++ SWNAMI+ Y Q
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 298 DLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKLDEAREVYNQMPCKD----IAA 349
+ ++A+ LF ++ + V+ + I++ ++G L + V++ + D I
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----P 405
TAL+ + G + EA ++F+ ++ ++ + WN+MI+G+ G+ EAL++F +M
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
V++ ++ + AG + + IF +M R
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++ +V++K +I AR+LFD+ +++L SWN MI+GY N + E+A LF M + +
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 131 SWALMITCY----TRKGKLEKARELLELV-PDKLESACW--NSVIAGYAKKGQFSDAEKV 183
+ ITC + G L + + +LV ES+ + ++I YAK G ++A ++
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR 243
F+LM K+ V++N+M++GY +G+ AL+ F +M +NSG
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM---------------LNSG------ 516
Query: 244 QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQD 298
P V+++ +L + G + E +F+SM + +V + M+ +
Sbjct: 517 ------ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 299 LQIDEAVKLFIKLPHKDGVS-WSTIINGYIRVGK 331
+ A++ + + G S W T++ G R+ K
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLL-GACRIHK 603
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 23/256 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
KL ++E A ++F + K+L ++N+MIS + +NG DA LF +M + N V+
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLELVPDKL 159
+++ + + D++ D + +I Y + G + +AR L +L+ K
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVFNLM--------PVKDL-VSYNSMLAGYTQNGKMGL 210
E WN++I+GY GQ +A +F M PV L V Y AG + G
Sbjct: 486 E-VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHGK 269
E +V + MV +G L A Q E + P + W T+L H
Sbjct: 545 NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
Query: 270 ITEAR----RLFDSMP 281
AR +LF+ P
Sbjct: 605 TNLARTVSEKLFELDP 620
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
Query: 407 KNSVSWNTMISG-YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+N +S T ++ + G + A +IF +++ ++ +N L+ GF N +L
Sbjct: 49 RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAH 108
Query: 466 MGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
+ + KP+ ST+ + G +H + G ++L + + ++ MY K
Sbjct: 109 LRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW 168
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP-DQVTFIGML 583
RVE A +VF + D I WN++ISGY N +E+ + F+ +++E D T + +L
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 584 SACSHAGLANQGLDLFK------CMVEDFAIEPLAEHYS 616
A + G+ + C D+ + YS
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 286/628 (45%), Gaps = 93/628 (14%)
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEAR- 274
+V +WNL + VN D + LF ++ PN +V C AR +
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC--ARLADVGCCEM 73
Query: 275 ---RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGK 331
L S +V A + + + +D A K+F ++P +D +W+ +++G+ + G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQT------------------------------- 360
D+A ++ +M +I ++ + LIQ+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 361 --------GRVDEASKMFNQLS--TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK---- 406
G +D A +F + R + WNSM + G +A L+ M +
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 407 -----------------------------------KNSVSWNTMISGYAQAGQMDSAENI 431
++ + NT IS Y+++ SA +
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F M R VSW +I+G+ + +AL M + G+KPD T
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 492 QVGNQLHEYILKSGYIND-LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISG 550
+ G + G D + + NALI MY+KCG + A +F +++W ++I+G
Sbjct: 374 ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAG 433
Query: 551 YALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
YALNG +EA K F +M+ + P+ +TF+ +L AC+H+G +G + F M + + I P
Sbjct: 434 YALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISP 493
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL 670
+HYSC+VDLLGR G+LEEA ++R M K +AG+WG+LL AC++H+N++I E AA L
Sbjct: 494 GLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESL 553
Query: 671 SELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSD 730
LEP A+ Y+ ++N++A AG W+ R+R +M+ + K PG S I+V + F
Sbjct: 554 FNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVG 613
Query: 731 DSGRLRPETIQIILIGISADIRDKFNVF 758
+ G + E I L G+S +DK ++
Sbjct: 614 EHGHVENEVIYFTLNGLSLFAKDKHVLY 641
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 196/434 (45%), Gaps = 47/434 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+ + +F K + A ++F++M +R+ +WN M++G+ + ++A LF M +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 131 SWALMITCYTRKGKLEKARELLELVPD-------KLESACWNSVIAGYAKKGQFSDAEKV 183
++ + + EK+ +LLE + ++ N+ I+ Y K G A+ V
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 184 FNLMPVKD--LVSYNSMLAGYTQNGK----MGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
F + D +VS+NSM Y+ G+ GL + + ++ ++ + + N
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 238 DLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
L+ R + + + + T + +++ AR LFD M + VSW MI+
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 294 AYAQDLQIDEAVKLF---IKLPHK-DGVSWSTIINGYIRVGKLDEAR------EVYNQMP 343
YA+ +DEA+ LF IK K D V+ ++I+G + G L+ + ++Y
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG--- 387
Query: 344 CK--DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
CK ++ AL+ + G + EA +F+ + + W +MIAG+ +G EAL LF
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 402 RQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+M K N +++ ++ A +G ++ F M++ +S G S
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS-----PGLDHYSCMV 502
Query: 458 DALKSLVLMGREGK 471
D L+GR+GK
Sbjct: 503 D------LLGRKGK 510
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 192/465 (41%), Gaps = 81/465 (17%)
Query: 87 RQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRK 142
R+L+ ++ +WN I ++ + E+ LF M E +NF++ + R
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 143 GKLEKARELLELVPDKL-ESACWNSVIAGYAKKGQFSD------AEKVFNLMPVKDLVSY 195
+ E+V L +S W+ V G A F A KVF MP +D ++
Sbjct: 66 ADVG----CCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTW 121
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE-------- 247
N+ML+G+ Q+G A F +M + ++ V + S + +L E
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 248 ---KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC--KNVVSWNAMIAAYAQDLQID 302
+ A +W++ + + G + A+ +F+++ + VVSWN+M AY+ +
Sbjct: 182 LGVDVQVTVANTWIST---YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 303 EAVKLF-IKLPHKDGVSWSTIIN--------GYIRVGKLDEAREVYNQMPCKDIAAETAL 353
+A L+ + L + ST IN + G+L + ++ +DI A
Sbjct: 239 DAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD-QDIEAINTF 297
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK------ 407
+S ++ A +F+ +++R + W MI+G+ + G MDEAL LF M K
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 408 ----------------------------------NSVSWNTMISGYAQAGQMDSAENIFQ 433
N + N +I Y++ G + A +IF
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
E+ +V+W ++I G+ N ++ +ALK M KP+ TF
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/527 (21%), Positives = 212/527 (40%), Gaps = 115/527 (21%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
M H I S VF + K V+ A +VF ++ T+N+M+S F ++G
Sbjct: 73 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------------DVMPERDN 129
A LF +M + + + + ++ E++ KL DV N
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKLESAC-WNSVIAGYAKKGQFSDAEKVFNLM- 187
+W I+ Y + G L+ A+ + E + + WNS+ Y+ G+ DA ++ LM
Sbjct: 193 -TW---ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 188 --------------------------------------PVKDLVSYNSMLAGYTQNGKMG 209
+D+ + N+ ++ Y+++
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG-- 263
A F+ M + VSW +M+SG+ GD+ A LF + P+ V+ ++++ G
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 264 ----------------------------------FARHGKITEARRLFDSMPCKNVVSWN 289
+++ G I EAR +FD+ P K VV+W
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKLDEA-------REV 338
MIA YA + EA+KLF K+ D +++ ++ G L++ ++V
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQV 488
Query: 339 YNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGR---- 393
YN P D + ++ L + G+++EA ++ +S + D W +++ C+ R
Sbjct: 489 YNISPGLD--HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA-CKIHRNVKI 545
Query: 394 MDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
++A + + + + + M + YA AG D I M++RNI
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 592
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 28/324 (8%)
Query: 58 VFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM 113
+ S+ IH +++ N+ IS+++K+ AR LFD M+ R VSW MI+GY
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 114 VEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKAREL---LELVPDKLESA-CWN 165
++EA LF M + D + +I+ + G LE + + ++ K ++ N
Sbjct: 338 MDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN 397
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----K 221
++I Y+K G +A +F+ P K +V++ +M+AGY NG AL F KM +
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRL 276
N +++ ++ +SG L + F + +P + M+ R GK+ EA L
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Query: 277 FDSMPCK-NVVSWNAMIAA--YAQDLQI-DEAVKLFIKLPHKDGVSWSTIINGYIRVGKL 332
+M K + W A++ A ++++I ++A + L + + + N Y G
Sbjct: 518 IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMW 577
Query: 333 D---EAREVYNQMPCKDIAAETAL 353
D R + Q K E+ +
Sbjct: 578 DGFARIRSIMKQRNIKKYPGESVI 601
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N++ N++I +++K G I +AR +FD ++ +V+W TMIAGY N + EA KLF M
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 126 ERD----NFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAE 181
+ D + ++ ++ G LEK E ++ +
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM-------------------------K 486
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-NVVSWNLMVSGFVNSGDLS 240
+V+N+ P D Y+ M+ + GK+ AL M+ K + W +++ ++
Sbjct: 487 QVYNISPGLD--HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVK 544
Query: 241 SARQLFEKIPN------------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
A Q E + N N + M GFAR I + R + P ++V+
Sbjct: 545 IAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI-KKYPGESVIQV 603
Query: 289 NA 290
N
Sbjct: 604 NG 605
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 293/604 (48%), Gaps = 60/604 (9%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEK--- 248
N L +++ K+ A F ++M + V S+ + LS R L ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 249 -IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
I NP+ + +L + + +A +LFD M N VS MI+AYA+ +D+AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 308 FIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQ 359
F + ++T++ + LD R+++ + C + + ET +++ ++
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT----- 414
G + A ++F+Q++ + + ++ G+ Q+GR +AL LF + + V W++
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSV 290
Query: 415 -----------------------------------MISGYAQAGQMDSAENIFQAMEERN 439
++ Y + +SA FQ + E N
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 440 IVSWNSLITGFLQNSLYFDALKSL-VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
VSW+++I+G+ Q S + +A+K+ L + + T+ +G Q+H
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
+K I + +ALI MY+KCG ++ A +VF +++ D+++W + ISG+A G A
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA + F++M+S + P+ VTFI +L+ACSHAGL QG M+ + + P +HY C+
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
+D+ R G L+EA ++ M + +A W L C HKNLE+GE A L +L+P +
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDT 590
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
+ Y+ N++ AG+WEE + LM ++ K CSWI+ + +I F+ D + P+
Sbjct: 591 AGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGD--KHHPQ 648
Query: 739 TIQI 742
T +I
Sbjct: 649 TQEI 652
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 201/438 (45%), Gaps = 38/438 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N ++ ++ + + DA +LFD+MS+ N VS TMI+ Y ++++A LF M +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESA--CWNS-----VIAGYAKKGQFSDAEKV 183
+ M T + +A + + + A C N+ ++ Y K G A++V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG-----D 238
F+ M VK V+ ++ GYTQ G+ AL F + + V W+ V V +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKACASLEE 300
Query: 239 LSSARQL---FEKIPNPNAVSWVTMLCGF-ARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
L+ +Q+ K+ + VS T L F + A R F + N VSW+A+I+
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 295 YAQDLQIDEAVKLFIKLPHKDG-----VSWSTIINGYIRVGKLDEAREVYNQMPCKDIA- 348
Y Q Q +EAVK F L K+ ++++I + + +V+ + +
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 349 ---AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
E+AL++ + G +D+A+++F + D + W + I+G G EAL LF +M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 406 ----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLITGFLQNSLY 456
K NSV++ +++ + AG ++ ++ M + I ++ +I + ++ L
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 457 FDALKSLVLMGREGKKPD 474
+ALK + M E PD
Sbjct: 541 DEALKFMKNMPFE---PD 555
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 89/185 (48%), Gaps = 36/185 (19%)
Query: 57 RVFSNTIHKNLVTY----NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS 112
+V ++ I ++L+ +++I++++K G + DA ++F+ M ++V+W I+G+ +
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 113 MVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVI 168
EA +LF+ M + ++ ++ ++T + G +E+ + L+ + K
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRK---------- 517
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA-EKNVVSWN 227
+N+ P D Y+ M+ Y ++G + AL F + M E + +SW
Sbjct: 518 ---------------YNVAPTID--HYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWK 560
Query: 228 LMVSG 232
+SG
Sbjct: 561 CFLSG 565
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-- 94
+ ++ I K G +++A VF + + ++V + + IS A G S+A +LF+KM
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 95 --QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEK 147
+ N V++ ++ H +VE+ D M + N + + MI Y R G L++
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 148 ARELLELVPDKLESACWNSVIAG 170
A + ++ +P + ++ W ++G
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 275/551 (49%), Gaps = 41/551 (7%)
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
N++P+ L+ + + + + A FE + +V WN M+ G+ NS + A
Sbjct: 37 NVIPLSRLIDFCTTCP---ETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALI 93
Query: 245 LFEKI------PNPNAVSWVTMLC--------GFARHGKITEARRLFDSMPCKNVVSWNA 290
++++ P+ +V C G HG + + F+ N+
Sbjct: 94 FYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG--FEV----NMYVSTC 147
Query: 291 MIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA- 349
++ Y +++ +++F +P + V+W ++I+G++ + +A E + +M + A
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
ET ++ L+ GR + I GF Q D F+ N
Sbjct: 208 ETIMVDLLVACGRCKD-------------IVTGKWFHGFLQGLGFDP---YFQSKVGFNV 251
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
+ ++I YA+ G + +A +F M ER +VSWNS+ITG+ QN +AL + M
Sbjct: 252 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G PD+ TF Q+G +H Y+ K+G++ D + AL+ MYAK G ESA
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSH 588
++ F +E D I+W +I G A +G+ EA F++M + PD +T++G+L ACSH
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
GL +G F M + +EP EHY C+VD+L R GR EEA +V+ M VK N +WG
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
+LL C +H+NLE+ + ++E E + Y+ LSN++A+AGRW +V+ +R M+ KR
Sbjct: 492 ALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKR 551
Query: 709 AGKLPGCSWIE 719
K+ G S +E
Sbjct: 552 VDKVLGHSSVE 562
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 147/310 (47%), Gaps = 21/310 (6%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
F + + N++ S+I ++AK G + AR LFD M +R LVSWN++I GY N EEA
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 119 KLF----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGY 171
+F D+ D ++ +I +G + + + V ++A +++ Y
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSW 226
AK G A+K F + KD +++ ++ G +G AL F++M EK + +++
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++ + G + ++ F ++ + P + M+ +R G+ EA RL +MP
Sbjct: 423 LGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Query: 282 CK-NVVSWNAMIAA--YAQDLQIDEAVKLFIKLPHKDGVSWSTII-NGYIRVGKLDEARE 337
K NV W A++ ++L++ + ++ + P + G ++ N Y + G+ + +
Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKL 542
Query: 338 VYNQMPCKDI 347
+ M K +
Sbjct: 543 IRESMKSKRV 552
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 185/415 (44%), Gaps = 43/415 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ ++ ++ G+++ ++F+ + Q N+V+W ++I+G+++N+ +A + F M
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 126 E-----RDNFSWALMITCYTRK----GK-LEKARELLELVPDKLESACWNSVIAG----- 170
+ L++ C K GK + L P +N ++A
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
YAK G A +F+ MP + LVS+NS++ GY+QNG AL F M + + +
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 320
Query: 231 SGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG----FARHGKITEARRLFDSMPC 282
+ + + QL + I V ++C +A+ G A++ F+ +
Sbjct: 321 LSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 380
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DGVSWSTIINGYIRVGKLDEARE 337
K+ ++W +I A +EA+ +F ++ K DG+++ ++ +G ++E +
Sbjct: 381 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 440
Query: 338 VYNQMPCKDIAA-------ETALMSGLIQTGRVDEASKMFNQLSTRDTI-CWNSMIAGFC 389
+ +M +D+ ++ L + GR +EA ++ + + + W +++ G C
Sbjct: 441 YFAEM--RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG-C 497
Query: 390 QSGRMDEALDLFRQM---PKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEERNI 440
E D R M P++ ++S YA+AG+ + I ++M+ + +
Sbjct: 498 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGR---VESAEQVFTAIECVDLISWNSLISGY 551
NQLH ++KS I ++ + LI C + A VF +I+C + WNS+I GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
+ + +A +++ML + PD TF +L ACS GL + F V F ++
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS--GLRDIQ---FGSCVHGFVVKTG 137
Query: 612 AE----HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
E +CL+ + G + V + + N WGSL+
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLI 180
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 240/441 (54%), Gaps = 42/441 (9%)
Query: 366 ASKMFNQLSTR-DTICWNSMIAGFCQSGRMDEALDLFRQM-------PKKNSVSW----- 412
A K+F+++ + WN++I G+ + G A L+R+M P ++ +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 413 ----------------------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
N+++ YA G + SA +F M E+++V+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
S+I GF +N +AL M +G KPD T +G ++H Y++K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAF 564
G +L SN L+ +YA+CGRVE A+ +F + + +SW SLI G A+NG+ EA + F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 565 KQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
K M S E ++P ++TF+G+L ACSH G+ +G + F+ M E++ IEP EH+ C+VDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
R G++++A+ ++ M ++ N +W +LLGAC VH + ++ EFA +++ +LEP+++ +Y+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQII 743
LSNM+A RW +V+++R M K+PG S +EV N++ FL D + + I
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 744 LIGISADIRDKFNVFNMLSVF 764
L ++ +R + V + +V+
Sbjct: 492 LKEMTGRLRSEGYVPQISNVY 512
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 394 MDEALDLFRQMPKK-NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQ 452
M A +F ++ K N WNT+I GYA+ G SA ++++ M ++G ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMR----------VSGLVE 118
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
PD T+ ++G +H +++SG+ + ++V
Sbjct: 119 --------------------PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYV 158
Query: 513 SNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV 572
N+L+ +YA CG V SA +VF + DL++WNS+I+G+A NG EA + +M S+ +
Sbjct: 159 QNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI 218
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
PD T + +LSAC+ G G + M++ L + L+DL R GR+EEA
Sbjct: 219 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS-NVLLDLYARCGRVEEAK 277
Query: 633 NVVRGMDVKANAGLWGSLL 651
+ M V N+ W SL+
Sbjct: 278 TLFDEM-VDKNSVSWTSLI 295
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 205/483 (42%), Gaps = 78/483 (16%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR-NLVSWNTMIAGYLH 110
+ V + + K+L+ Y ++S+ +S A ++F K+ + N+ WNT+I GY
Sbjct: 41 IRHGVSISDAELGKHLIFY--LVSL-PSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAE 97
Query: 111 NSMVEEASKLFDVMP-----ERDNFSWALMITCYTRKGKLEKARELLELV-PDKLESACW 164
A L+ M E D ++ +I T + + +V S +
Sbjct: 98 IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIY 157
Query: 165 --NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
NS++ YA G + A KVF+ MP KDLV++NS++ G+ +NGK AL + +M K
Sbjct: 158 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP- 281
+ P+ + V++L A+ G +T +R+ M
Sbjct: 218 I---------------------------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 282 ---CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREV 338
+N+ S N ++ YA+ +++EA LF ++ K+ VSW+++I G G EA E+
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 339 YNQM-------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIA 386
+ M PC+ ++ G V E + F ++ I + M+
Sbjct: 311 FKYMESTEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 387 GFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE----NIFQAMEERNIV 441
++G++ +A + + MP + N V W T++ G D AE I Q +E +
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ-LEPNHSG 427
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREG--KKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+ L + + D K M R+G K P S +VGN++HE
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV-------------EVGNRVHE 474
Query: 500 YIL 502
+++
Sbjct: 475 FLM 477
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+++ H + I S G ++ +N + G V A +VF K+LV +NS+I+
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASK-------------LFDV 123
FA+NGK +A L+ +M+ + + G+ S++ +K + V
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKP-----DGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 124 MPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
R+ S +++ Y R G++E+A+ L + + DK S W S+I G A G +A ++
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 184 FN-------LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVS 231
F L+P + +++ +L + G + +F +M E+ + + MV
Sbjct: 311 FKYMESTEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 232 GFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHG 268
+G + A + + +P PN V W T+L HG
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/496 (31%), Positives = 251/496 (50%), Gaps = 36/496 (7%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAY-------AQDLQIDEAVKLFIKLPHKDGVSWS 320
G + A +F PC N N MI A A + I KL+ D ++
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
++ +RV + R+++ Q+ + +++GLIQ
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQM-------------------- 160
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME--ER 438
+ G + +A +F +M K+ WN +++GY + G+MD A ++ + M R
Sbjct: 161 -------YFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
N VSW +I+G+ ++ +A++ M E +PD+ T ++G ++
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
Y+ G + ++NA+I MYAK G + A VF + ++++W ++I+G A +G+
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA F +M+ V P+ VTFI +LSACSH G + G LF M + I P EHY C+
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
+DLLGR G+L EA V++ M KANA +WGSLL A VH +LE+GE A L +LEP+N+
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNS 453
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
NY+ L+N+++ GRW+E +R +M+ K+ G S IEV+N++ F+S D + E
Sbjct: 454 GNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVE 513
Query: 739 TIQIILIGISADIRDK 754
I IL + I+ K
Sbjct: 514 RIHEILQEMDLQIQSK 529
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 173/368 (47%), Gaps = 69/368 (18%)
Query: 55 AVRV----FSNTIHKNLVTY---------NSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
AVRV F IH +V + +I ++ G + DAR++FD+M +++ W
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW 185
Query: 102 NTMIAGYLHNSMVEEASKLFDVMP--ERDNFSWALMITCYTRKGKLEKA-----RELLEL 154
N ++AGY ++EA L ++MP R+ SW +I+ Y + G+ +A R L+E
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 155 V-PDKLE-----SACW---------------------------NSVIAGYAKKGQFSDAE 181
V PD++ SAC N+VI YAK G + A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSG 237
VF + +++V++ +++AG +G AL F +M + V V++ ++S + G
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 238 DLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAM 291
+ ++LF + +PN + M+ R GK+ EA + SMP K N W ++
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 425
Query: 292 IAA--YAQDLQIDE-AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP---CK 345
+AA DL++ E A+ IKL + ++ + N Y +G+ DE+R + N M K
Sbjct: 426 LAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVK 485
Query: 346 DIAAETAL 353
+A E+++
Sbjct: 486 KMAGESSI 493
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 141/289 (48%), Gaps = 21/289 (7%)
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT---QNGKMGLALHFFEKM----AE 220
I + G A VF P + +N+M+ + + +A+ + K+ A+
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAK 113
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARH----GKITEARRL 276
+ ++ ++ V D+ RQ+ ++ S V ++ G + G + +AR++
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH--KDGVSWSTIINGYIRVGKLDE 334
FD M K+V WNA++A Y + ++DEA L +P ++ VSW+ +I+GY + G+ E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 335 AREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIA 386
A EV+ +M +++ + A++S G ++ ++ + + R N++I
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 387 GFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+ +SG + +ALD+F + ++N V+W T+I+G A G A +F M
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 44/166 (26%)
Query: 49 LGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
LG +E R+ S H+ + N++I ++AK+G I+ A +F+ +++RN+V+W T+
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 105 IAGYLHNSMVEEASKLFDVM------PERDNF---------------------------- 130
IAG + EA +F+ M P F
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 131 ------SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG 170
+ MI R GKL +A E+++ +P K +A W S++A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 310/636 (48%), Gaps = 71/636 (11%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV- 223
+S++ YAK G + A KVF M +D+V + +M+ Y++ G +G A +M + +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 224 ---VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV--TMLCGFARHGKITEARRLFD 278
V+ M+SG + L F I + V +ML + + + +A+ LFD
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHD-FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL------PHKDGVSWSTIINGYIRVGKL 332
M +++VSWN MI+ YA + E +KL ++ P + S ++G + L
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG--TMCDL 261
Query: 333 DEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+ R ++ Q+ D+ +TAL++ ++ G+ + + ++ + +D +CW MI+G
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321
Query: 389 CQSGRMDEALDLFRQMPKKNS--------------------------------------- 409
+ GR ++AL +F +M + S
Sbjct: 322 MRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT 381
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG-- 467
+ N++I+ YA+ G +D + IF+ M ER++VSWN++I+G+ QN D K+L+L
Sbjct: 382 PALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN---VDLCKALLLFEEM 438
Query: 468 --REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+ ++ D T VG +H +++S V AL+ MY+KCG
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E+A++ F +I D++SW LI+GY +G A + + + L + P+ V F+ +LS+
Sbjct: 499 LEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH G+ QGL +F MV DF +EP EH +C+VDLL R R+E+AF + + +
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+ G +L ACR + E+ + + EL+P +A +Y+ L + A RW++V MR
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 706 DKRAGKLPGCSWIEVQNQIQCFL------SDDSGRL 735
KLPG S IE+ + F SDD+ L
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSL 714
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 198/464 (42%), Gaps = 101/464 (21%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
++ NSM++++ K + DA+ LFD+M QR++VSWNTMI+GY + E KL M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 125 -----PERDNFSWAL---------------------------------MITCYTRKGKLE 146
P++ F +L +IT Y + GK E
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP------------------ 188
+ +LE +P+K + CW +I+G + G+ A VF+ M
Sbjct: 298 ASYRVLETIPNK-DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 189 ---------------------VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
D + NS++ Y + G + +L FE+M E+++VSWN
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 228 LMVSGFVNSGDLSSARQLFEK-----IPNPNAVSWVTMLCGFARHGKITEARRLFDSM-- 280
++SG+ + DL A LFE+ + ++ + V++L + G + + + +
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIR 476
Query: 281 ----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
PC V + A++ Y++ ++ A + F + KD VSW +I GY GK D A
Sbjct: 477 SFIRPCSLVDT--ALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIAL 534
Query: 337 EVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTICWN-----SMIAG 387
E+Y++ + A++S G V + K+F+ + + N ++
Sbjct: 535 EIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDL 594
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
C++ R+++A +++ + S+ +I +A E+I
Sbjct: 595 LCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDI 638
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 208/495 (42%), Gaps = 117/495 (23%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
K G + A +VF +++V + +MI +++ G + +A L ++M + + V+
Sbjct: 92 AKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLL 151
Query: 103 TMIAGYLH-----------------------NSM---------VEEASKLFDVMPERDNF 130
M++G L NSM V +A LFD M +RD
Sbjct: 152 EMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV 211
Query: 131 SWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSDAE--K 182
SW MI+ Y G + + +LL L PD+ + A + G D E +
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ------QTFGASLSVSGTMCDLEMGR 265
Query: 183 VFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
+ + VK D+ +++ Y + GK + E + K+VV W +M+SG + G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 238 DLSSARQLFEK------------------------------------------IPNPNAV 255
A +F + + P
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF--IKLPH 313
S +TM +A+ G + ++ +F+ M +++VSWNA+I+ YAQ++ + +A+ LF +K
Sbjct: 386 SLITM---YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKT 442
Query: 314 KDGVSWSTIIN--------GYIRVGKLDEAREVYNQM-PCKDIAAETALMSGLIQTGRVD 364
V T+++ G + VGKL + + + PC + +TAL+ + G ++
Sbjct: 443 VQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV--DTALVDMYSKCGYLE 500
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYA 420
A + F+ +S +D + W +IAG+ G+ D AL+++ + + N V + ++S +
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Query: 421 QAGQMDSAENIFQAM 435
G + IF +M
Sbjct: 561 HNGMVQQGLKIFSSM 575
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDSAENIF 432
DT + S++ R+ L + +Q+ S +++++ YA+ G + A +F
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVF 104
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
+ M ER++V W ++I + + + +A + M +G KP T Q
Sbjct: 105 EEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ 164
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
LH++ + G+ D+ V N+++ +Y KC V A+ +F +E D++SWN++ISGYA
Sbjct: 165 C---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
G E K +M + + PDQ TF LS
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
PD TF G +H+ +L +G+ +D ++S++L+ +YAK G + A +V
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
F + D++ W ++I Y+ G EA +M + + P VT + MLS
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 56/244 (22%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G +++++ +F ++LV++N++IS +A+N + A LF++M
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK----- 439
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
F + + D+F+ ++ + G L + + +V
Sbjct: 440 ---------------------FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 160 ESACW---NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
C +++ Y+K G A++ F+ + KD+VS+ ++AGY +GK +AL +
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY- 537
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
S F++SG PN V ++ +L + +G + + ++
Sbjct: 538 --------------SEFLHSG------------MEPNHVIFLAVLSSCSHNGMVQQGLKI 571
Query: 277 FDSM 280
F SM
Sbjct: 572 FSSM 575
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 258/470 (54%), Gaps = 8/470 (1%)
Query: 301 IDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
+D A +F + + + ++ +I+G++ G+ + +Y++M + + +++ +++
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 361 GRVDEASKMFNQL------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT 414
+ ++ Q+ S+R M+ + +SG + A +F +MP ++ V+
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSV--GLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
MI+ Y++ G + A +FQ ++ ++ V W ++I G ++N AL+ M E +
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
+ T ++G +H ++ FV NALI MY++CG + A +VF
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ D+IS+N++ISG A++G ++EA F+ M++ P+QVT + +L+ACSH GL +
Sbjct: 315 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL++F M F +EP EHY C+VDLLGR+GRLEEA+ + + ++ + + G+LL AC
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 434
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
++H N+E+GE A RL E E ++ Y+ LSN++A +G+W+E +R MRD K PG
Sbjct: 435 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Query: 715 CSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRDKFNVFNMLSVF 764
CS IEV NQI FL D E I L ++ +R K N +++ F
Sbjct: 495 CSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQIDIIMGF 544
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 190/423 (44%), Gaps = 62/423 (14%)
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A VF+ + ++ Y +M+ G+ +G+ + + +M +V+ N +++ + + DL
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL 139
Query: 240 SSARQLFEKIPNPNAVS----WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
R++ ++ S + M+ + + G++ A+++FD MP ++ V+ MI Y
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 296 AQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----T 351
++ I EA++LF + KD V W+ +I+G +R ++++A E++ +M ++++A
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 352 ALMSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
++S G ++ S + NQ N++I + + G ++EA +FR M K
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL------K 461
+ +S+NTMISG A G A N F+ M R GF N + AL
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNR----------GFRPNQVTLVALLNACSHG 369
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
L+ +G E + F V Q+ Y G I DL
Sbjct: 370 GLLDIGLEVFNSMKRVF-------------NVEPQIEHY----GCIVDLL---------- 402
Query: 522 KCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
GRV E+ + IE + D I +L+S ++G +E + + L E PD
Sbjct: 403 --GRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG-NMELGEKIAKRLFESENPDSG 459
Query: 578 TFI 580
T++
Sbjct: 460 TYV 462
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 211/478 (44%), Gaps = 66/478 (13%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
L V+ A VFS + N+ Y +MI F +G+ +D L+ +M
Sbjct: 74 LDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM--------------- 118
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV- 167
+HNS V+P DN+ +IT + L+ RE+ V KL SV
Sbjct: 119 IHNS----------VLP--DNY----VITSVLKACDLKVCREIHAQVL-KLGFGSSRSVG 161
Query: 168 ---IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+ Y K G+ +A+K+F+ MP +D V+ M+ Y++ G + AL F+ + K+ V
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFD-- 278
W M+ G V + +++ A +LF ++ + N + V +L + G + R +
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 279 ---SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG----K 331
M N V NA+I Y++ I+EA ++F + KD +S++T+I+G G
Sbjct: 282 ENQRMELSNFVG-NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIA 386
++E R++ N+ + AL++ G +D ++FN + + + ++
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 387 GFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAM-EERNIVSWN 444
+ GR++EA +P + + + T++S G M+ E I + + E N S
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSG- 459
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
T L ++LY + K +E + +S +V NQ+HE+++
Sbjct: 460 ---TYVLLSNLYASSGK-----WKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLV 509
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 156/326 (47%), Gaps = 24/326 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK G++ A ++F ++ V MI+ +++ G I +A +LF + ++ V W MI
Sbjct: 169 GKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMID 228
Query: 107 GYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---L 159
G + N + +A +LF M + F+ +++ + G LE R + V ++ L
Sbjct: 229 GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+ N++I Y++ G ++A +VF +M KD++SYN+M++G +G A++ F M
Sbjct: 289 SNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 220 EK----NVVSWNLMVSGFVNSGDL-------SSARQLFEKIPNPNAVSWVTMLCGFARHG 268
+ N V+ +++ + G L +S +++F P + L G R G
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG--RVG 406
Query: 269 KITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKLPHKDGVSWSTIIN 324
++ EA R +++P + + + +++A ++++ E + K + + D ++ + N
Sbjct: 407 RLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSN 466
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE 350
Y GK E+ E+ M I E
Sbjct: 467 LYASSGKWKESTEIRESMRDSGIEKE 492
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 262/478 (54%), Gaps = 8/478 (1%)
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
AYA +I ++ LF + D ++ IN G D+A +Y Q+ +I
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 354 MSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
S L+++ ++ K+ + + D ++ + + G + A +F +MP+++
Sbjct: 133 FSSLLKSCST-KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
VS MI+ YA+ G +++A +F +M ER+IVSWN +I G+ Q+ DAL +
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 469 EGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
EGK KPD+ T + G +H ++ S ++ V LI MY+KCG +E
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS-EEVVPDQVTFIGMLSAC 586
A VF D+++WN++I+GYA++GY+ +A + F +M + P +TFIG L AC
Sbjct: 312 EAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+HAGL N+G+ +F+ M +++ I+P EHY CLV LLGR G+L+ A+ ++ M++ A++ L
Sbjct: 372 AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
W S+LG+C++H + +G+ A L L N+ Y+ LSN++A G +E V ++R LM++
Sbjct: 432 WSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKE 491
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRDKFNVFNMLSVF 764
K K PG S IE++N++ F + D + + I +L IS I+ V N +V
Sbjct: 492 KGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 215/489 (43%), Gaps = 58/489 (11%)
Query: 52 VEEAVRVFSNTIHKNLVTYN-------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
V+E +++ + + NL+ + + +A +GKI + LF + +L +
Sbjct: 42 VDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAA 101
Query: 105 IAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
I N + ++A L+ ++ P FS +L+ +C T+ GKL L +
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFS-SLLKSCSTKSGKLIHTHVLKFGL--G 158
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
++ ++ YAK G A+KVF+ MP + LVS +M+ Y + G + A F+ M
Sbjct: 159 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFARHGKITEA 273
E+++VSWN+M+ G+ G + A LF+K+ P P+ ++ V L ++ G +
Sbjct: 219 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278
Query: 274 R--RLF--DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRV 329
R +F S NV +I Y++ ++EAV +F P KD V+W+ +I GY
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338
Query: 330 GKLDEAREVYNQMPCKDIAAETAL-----MSGLIQTGRVDEASKMFNQLSTRDTI----- 379
G +A ++N+M T + + G V+E ++F + I
Sbjct: 339 GYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIE 398
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+ +++ ++G++ A + + M +SV W++++ G + I + +
Sbjct: 399 HYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGL 458
Query: 439 NIVSWNSLITGFLQNSL-----YFDALKSLVLMGREG--KKPDQSTFXXXXXXXXXXXXX 491
NI NS I L N Y K LM +G K+P ST
Sbjct: 459 NI--KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI------------- 503
Query: 492 QVGNQLHEY 500
++ N++HE+
Sbjct: 504 EIENKVHEF 512
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/639 (27%), Positives = 290/639 (45%), Gaps = 98/639 (15%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF----------EKIPN 251
Y + ++G A F++M E+N++S+N ++SG+ G A +LF +K
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
A+ + C G++ + + + + V N +I Y++ ++D+A+ LF +
Sbjct: 152 AGALGFCGERCDLDL-GELLHGLVVVNGLS-QQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 312 PHKDGVSWSTIINGYIRVGKLDEAREVYNQM-----------------PCK--------- 345
+D VSW+++I+GY+RVG +E + +M C
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 346 ----------------DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
DI TAL+ + G + EA K+F+ + +++ + +N+MI+GF
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 390 QSGRM-----DEALDLFRQM------PKKNSVS--------------------------- 411
Q + EA LF M P ++ S
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 412 ------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+ +I YA G + F + +++I SW S+I +QN A
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+ +P++ T G Q+ Y +KSG V + I+MYAK G
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+ A QVF ++ D+ +++++IS A +G A EA F+ M + + P+Q F+G+L A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
C H GL QGL F+CM D+ I P +H++CLVDLLGR GRL +A N++ + +
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
W +LL +CRV+K+ IG+ A RL ELEP + +Y+ L N++ ++G E +R LMR
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
D+ K P SWI + NQ F D + I +L
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 220/478 (46%), Gaps = 80/478 (16%)
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFS 131
++ K ++ ARQLFD+M +RN++S+N++I+GY E+A +LF + + D F+
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 132 WALMITCYTRKGKLEKARELLE--LVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLM 187
+A + + L+ ELL +V + L + N +I Y+K G+ A +F+
Sbjct: 151 YAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK--NVVSWNL----------MVSGFVN 235
+D VS+NS+++GY + G L+ KM N+ ++ L + GF+
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 236 SG---DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
G +A+ E + V +L +A++G + EA +LF MP KNVV++NAMI
Sbjct: 270 KGMAIHCYTAKLGMEF----DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 293 AAYAQ-----DLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMP 343
+ + Q D EA KLF+ + + ++S ++ L+ R+++ +
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 344 CKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ ++ + S LI+ G ++ + F S +D W SMI Q+ +++ A D
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 400 LFRQM------PKKNSVSW---------------------------------NTMISGYA 420
LFRQ+ P++ +VS + IS YA
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++G M A +F ++ ++ +++++I+ Q+ +AL M G KP+Q F
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 195/452 (43%), Gaps = 77/452 (17%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
GE + + + H L + + + VF N I K GK+++A+ +F ++ V++N
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
S+IS + + G + L KM R+ ++ T G + + ++ F
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGF--------IE 269
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKD 191
+ I CYT K +E + +++ YAK G +A K+F+LMP K+
Sbjct: 270 KGMAIHCYTAKLGME------------FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN 317
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
+V+YN+M++G+ Q E E + ++ L + R+ E P+
Sbjct: 318 VVTYNAMISGFLQMD---------EITDEASSEAFKLF---------MDMQRRGLE--PS 357
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN-----AMIAAYAQDLQIDEAVK 306
P+ S V C A K E R ++ CKN + A+I YA ++ ++
Sbjct: 358 PSTFSVVLKACSAA---KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQ 414
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM-----------------PCKDIAA 349
F +D SW+++I+ +++ +L+ A +++ Q+ C D A
Sbjct: 415 CFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA- 473
Query: 350 ETALMSG-LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
AL SG IQ + F + T S I+ + +SG M A +F ++ +
Sbjct: 474 --ALSSGEQIQGYAIKSGIDAFTSVKT-------SSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+++ MIS AQ G + A NIF++M+ I
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G H +++KS L++ N L+ MY KC + A Q+F + ++IS+NSLISGY
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
G+ +A + F + + D+ T+ G L C LDL + + + L+
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE----RCDLDLGELLHGLVVVNGLS 180
Query: 613 EHY---SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRV 656
+ + L+D+ + G+L++A ++ D + W SL+ G RV
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS-WNSLISGYVRV 227
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 294/548 (53%), Gaps = 32/548 (5%)
Query: 245 LFEK-IPNPNAVSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQ 297
LF + + + SW +++ AR G EA F SM P ++ S+ I A +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS--SFPCAIKACSS 88
Query: 298 DLQI----DEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
I + F+ D S +I Y GKL++AR+V++++P ++I + T++
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 354 MSGLIQTGRVDEASKMFNQL-----STRDTICWNSM----IAGFCQ---SGRMDEALDLF 401
+ G G +A +F L D + +SM + C + + E++ F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 402 ---RQMPKKNSVSWNTMISGYAQAGQ--MDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
R + SV NT++ YA+ G+ + A IF + +++ VS+NS+++ + Q+ +
Sbjct: 209 VIKRGFDRGVSVG-NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 457 FDALKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A + L+ + + T ++G +H+ +++ G +D+ V +
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
+I MY KCGRVE+A + F ++ ++ SW ++I+GY ++G+A +A + F M+ V P+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
+TF+ +L+ACSHAGL +G F M F +EP EHY C+VDLLGR G L++A++++
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M +K ++ +W SLL ACR+HKN+E+ E + RL EL+ N Y+ LS+++A+AGRW+
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRDKF 755
+VER+R++M+++ K PG S +E+ ++ FL D + E I L ++ + +
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 756 NVFNMLSV 763
V N SV
Sbjct: 568 YVSNTSSV 575
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 197/415 (47%), Gaps = 41/415 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVM 124
++ +++I +++ GK+ DAR++FD++ +RN+VSW +MI GY N +A LF D++
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 125 PER---------DNFSWALMITCYTR---KGKLEKARELLELVPDKLESACWNSVIAGYA 172
+ D+ +I+ +R KG E + + N+++ YA
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 173 KKGQ--FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
K G+ + A K+F+ + KD VSYNS+++ Y Q+G A F ++ + VV++N +
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 231 SGFV-----NSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMP 281
V +SG L + + +++ + + +++ + + G++ AR+ FD M
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEARE 337
KNV SW AMIA Y +A++LF + + +++ +++ G E
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 338 VYNQMPCKDIAAETAL-----MSGLI-QTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQ 390
+N M + E L M L+ + G + +A + ++ + D+I W+S++A C+
Sbjct: 410 WFNAMKGR-FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA-CR 467
Query: 391 SGRMDEALDL----FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
+ E ++ ++ N + + YA AG+ E + M+ R +V
Sbjct: 468 IHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 167/360 (46%), Gaps = 43/360 (11%)
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ---------NGK 207
DK + WNSVIA A+ G ++A F+ M L S + +GK
Sbjct: 37 DKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGK 96
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARH 267
F VS L+V + G L AR++F++IP N VSW +M+ G+ +
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVM-YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 268 GKITEARRLF----------------DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IK 310
G +A LF DSM +V+S + + A + E++ F IK
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG----LTESIHSFVIK 211
Query: 311 LPHKDGVS-WSTIINGYIRVGK--LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
GVS +T+++ Y + G+ + AR++++Q+ KD + ++MS Q+G +EA
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 368 KMF-----NQLSTRDTICWNSMIAGFCQSG--RMDEAL--DLFRQMPKKNSVSWNTMISG 418
++F N++ T + I ++++ SG R+ + + + R + + + ++I
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + G++++A F M+ +N+ SW ++I G+ + AL+ M G +P+ TF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 26/261 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN---- 102
G G V A ++F + K+ V+YNS++SV+A++G ++A ++F ++ + +V++N
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 103 -TMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD 157
T++ H+ + + D + E D +I Y + G++E AR+ + + +
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALH 213
K W ++IAGY G + A ++F M + +++ S+LA + G
Sbjct: 351 K-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 214 FFEKM-----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARH 267
+F M E + + MV +G L A L +++ P+++ W ++L H
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Query: 268 GKITEAR----RLF--DSMPC 282
+ A RLF DS C
Sbjct: 470 KNVELAEISVARLFELDSSNC 490
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/561 (29%), Positives = 290/561 (51%), Gaps = 47/561 (8%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
P K + +++ Y + G + A F++M +++VV+W M++G+ +S + A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 248 KI------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYA 296
++ PN +S V C R+ K+ L + K ++ NAM+ YA
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSC---RNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 297 Q-DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+ ++ A +F + K+ V+W+T+I G+ +G ++Y QM ++ ++
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
++ AS + ++T I + + GF + N N++
Sbjct: 218 IAVR------ASASIDSVTTGKQIHASVIKRGF-----------------QSNLPVMNSI 254
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR---EGKK 472
+ Y + G + A++ F ME++++++WN+LI+ ++ D+ ++L++ R +G
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS----DSSEALLMFQRFESQGFV 310
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ TF G QLH I + G+ ++ ++NALI MYAKCG + +++V
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 533 FTAI-ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
F I + +L+SW S++ GY +GY EA + F +M+S + PD++ F+ +LSAC HAGL
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+GL F M ++ I P + Y+C+VDLLGR G++ EA+ +V M K + WG++L
Sbjct: 431 VEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Query: 652 GACRVHK-NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
GAC+ HK N I AA ++ EL+P Y+ LS ++A G+W + R+R +MR
Sbjct: 491 GACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNK 550
Query: 711 KLPGCSWIEVQNQIQCFLSDD 731
K G SWI V+NQ+ F D
Sbjct: 551 KEAGMSWILVENQVFSFAVSD 571
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 214/460 (46%), Gaps = 92/460 (20%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
H+ N + + K G VEEA +F +++V + +MI+ +A + + A + F +M
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 94 ----------------SQRNL--VSWNTMIAG-----------YLHNSM----------V 114
S RN+ +++ ++ G Y+ N+M +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 115 EEASKLFDVMPERDNFSWALMITCYTRKGK----LEKARELL----ELVPDKLE-----S 161
E A +F + +++ +W +IT +T G L+ +++L E+ P + S
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
A +SV G K+ S ++ F +L NS+L Y + G + A H+F +M +K
Sbjct: 224 ASIDSVTTG--KQIHASVIKRGFQ----SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML----------CGFARH 267
++++WN ++S S D S A +F++ + PN ++ +++ CG H
Sbjct: 278 DLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL-PHKDGVSWSTIINGY 326
G+I RR F+ KNV NA+I YA+ I ++ ++F ++ ++ VSW++++ GY
Sbjct: 337 GRIF--RRGFN----KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGY 390
Query: 327 IRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR-----D 377
G EA E++++M I + A++S G V++ K FN + + D
Sbjct: 391 GSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMI 416
+N ++ ++G++ EA +L +MP K + +W ++
Sbjct: 451 RDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 199/451 (44%), Gaps = 50/451 (11%)
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC 163
+I Y +VEEA LFD MP+RD +W MIT Y +A E C
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWE------------C 98
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
++ ++ +F+ + + + +K +++Y +++ G K+G+ + A N+
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMK-VLAYGALVHGVVV--KLGMEGSLYVDNAMMNM 155
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+ S + +A +F I N V+W T++ GF G +++ M +
Sbjct: 156 YA--------TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLE 207
Query: 284 N----------VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-WSTIINGYIRVGKL 332
N V +A I + QI +V IK + + ++I++ Y R G L
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASV---IKRGFQSNLPVMNSILDLYCRCGYL 264
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI--CW--NSMIAGF 388
EA+ +++M KD+ L+S L ++ EA MF + ++ + C+ S++A
Sbjct: 265 SEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 389 CQSGRMDEALDL----FRQMPKKNSVSWNTMISGYAQAGQMDSAENIF-QAMEERNIVSW 443
++ L FR+ KN N +I YA+ G + ++ +F + ++ RN+VSW
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
S++ G+ + +A++ M G +PD+ F + G + +++
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN-VME 442
Query: 504 SGY-IN-DLFVSNALIAMYAKCGRVESAEQV 532
S Y IN D + N ++ + + G++ A ++
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 29/260 (11%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V NL NS++ ++ + G +S+A+ F +M ++L++WNT+I+ L S EA
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEA 297
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL-VPDKLESACW-----------N 165
+F S + CYT + + L +L + N
Sbjct: 298 LLMFQRFE-----SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN 352
Query: 166 SVIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV- 223
++I YAK G D+++VF ++ ++LVS+ SM+ GY +G A+ F+KM +
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 224 ---VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARR 275
+ + ++S ++G + + F + NP+ + ++ R GKI EA
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYE 472
Query: 276 LFDSMPCK-NVVSWNAMIAA 294
L + MP K + +W A++ A
Sbjct: 473 LVERMPFKPDESTWGAILGA 492
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 51/199 (25%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-SQRNLVSWNTMIAGY------- 108
R+F +KN+ N++I ++AK G I D++++F ++ +RNLVSW +M+ GY
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 109 ----------------------------LHNSMVEEASKLFDVM-------PERDNFSWA 133
H +VE+ K F+VM P+RD ++
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN-- 455
Query: 134 LMITCYTRKGKLEKARELLELVPDKLESACWNSVIA---GYAKKGQFSD--AEKVFNLMP 188
++ R GK+ +A EL+E +P K + + W +++ + G S A KV L P
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKP 515
Query: 189 VKDLVSYNSMLAGYTQNGK 207
K + +Y + Y GK
Sbjct: 516 -KMVGTYVMLSYIYAAEGK 533
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 241/452 (53%), Gaps = 33/452 (7%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIR 328
A R+F + NV+ +NAMI Y+ E++ F + + D +++ ++
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+ L + V+ + LI+TG F++L ++ +
Sbjct: 115 LSDLRFGKCVHGE---------------LIRTG--------FHRLGKIRI----GVVELY 147
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
GRM +A +F +M ++N V WN MI G+ +G ++ ++F+ M ER+IVSWNS+I+
Sbjct: 148 TSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMIS 207
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
+ +AL+ M +G PD++T G +H SG
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 509 DLF-VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM 567
D V NAL+ Y K G +E+A +F ++ +++SWN+LISG A+NG F M
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAM 327
Query: 568 LSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+ E +V P++ TF+G+L+ CS+ G +G +LF M+E F +E EHY +VDL+ R G
Sbjct: 328 IEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSG 387
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
R+ EAF ++ M V ANA +WGSLL ACR H ++++ E AAM L ++EP N+ NY+ LSN
Sbjct: 388 RITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSN 447
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
++AE GRW++VE++R LM+ R K G S I
Sbjct: 448 LYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 208/459 (45%), Gaps = 55/459 (11%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
G L + A RVFS+ + N++ +N+MI ++ G ++ F M R + W
Sbjct: 47 GSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI--WADE-- 102
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNS 166
Y + +++ S L D+ + L+ T + R GK+
Sbjct: 103 -YTYAPLLKSCSSLSDLRFGK-CVHGELIRTGFHRLGKIRIG------------------ 142
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
V+ Y G+ DA+KVF+ M +++V +N M+ G+ +G + LH F++M+E+++VSW
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N M+S G A +LF ++ +P+ + VT+L A G + + + +
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 283 KN-----VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEARE 337
+ NA++ Y + ++ A +F K+ ++ VSW+T+I+G GK + +
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGID 322
Query: 338 VYNQMPCK-DIAAETALMSGLIQ----TGRVDEASKMFNQLSTR-----DTICWNSMIAG 387
+++ M + +A A G++ TG+V+ ++F + R T + +M+
Sbjct: 323 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDL 382
Query: 388 FCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
+SGR+ EA + MP N+ W +++S G + AE AME I NS
Sbjct: 383 MSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAE--VAAMELVKIEPGNSG 440
Query: 447 ITGFLQNSLY--------FDALKSLVLMGREGKKPDQST 477
L N LY + +++L+ R K QST
Sbjct: 441 NYVLLSN-LYAEEGRWQDVEKVRTLMKKNRLRKSTGQST 478
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
D A +F ++ N++ +N++I + ++L M G D+ T+
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWN 545
+ G +H ++++G+ + ++ +Y GR+ A++VF + +++ WN
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+I G+ +G FKQM + V++ M+S+ S G + L+LF C + D
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELF-CEMID 227
Query: 606 FAIEP 610
+P
Sbjct: 228 QGFDP 232
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 213/353 (60%), Gaps = 1/353 (0%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N+++ YA G + SA +F M E+++V+WNS+I GF +N +AL M +G K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
PD T +G ++H Y++K G +L SN L+ +YA+CGRVE A+ +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGL 591
F + + +SW SLI G A+NG+ EA + FK M S E ++P ++TF+G+L ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+G + F+ M E++ IEP EH+ C+VDLL R G++++A+ ++ M ++ N +W +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
GAC VH + ++ EFA +++ +LEP+++ +Y+ LSNM+A RW +V+++R M K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRDKFNVFNMLSVF 764
+PG S +EV N++ FL D + + I L ++ +R + V + +V+
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 379
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G +H +++SG+ + ++V N+L+ +YA CG V SA +VF + DL++WNS+I+G+
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
A NG EA + +M S+ + PD T + +LSAC+ G G + M++ L
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+ L+DL R GR+EEA + M V N+ W SL+
Sbjct: 125 HSS-NVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 66/361 (18%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
NS++ YA G + A KVF+ MP KDLV++NS++ G+ +NGK AL + +M K +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI- 85
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP--- 281
P+ + V++L A+ G +T +R+ M
Sbjct: 86 --------------------------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 282 -CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYN 340
+N+ S N ++ YA+ +++EA LF ++ K+ VSW+++I G G EA E++
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 341 QM-------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGF 388
M PC+ ++ G V E + F ++ I + M+
Sbjct: 180 YMESTEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 389 CQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE----NIFQAMEERNIVSW 443
++G++ +A + + MP + N V W T++ G D AE I Q +E + +
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ-LEPNHSGDY 296
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREG--KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
L + + D K M R+G K P S +VGN++HE++
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV-------------EVGNRVHEFL 343
Query: 502 L 502
+
Sbjct: 344 M 344
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+++ H + I S G ++ +N + G V A +VF K+LV +NS+I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL--------FDVMPERD 128
FA+NGK +A L+ +M+ + + I L A L V R+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN--- 185
S +++ Y R G++E+A+ L + + DK S W S+I G A G +A ++F
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 186 ----LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSGFVNS 236
L+P + +++ +L + G + +F +M E+ + + MV +
Sbjct: 183 STEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 237 GDLSSARQLFEKIP-NPNAVSWVTMLCGFARHG 268
G + A + + +P PN V W T+L HG
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 40/172 (23%)
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
I + +L+ G V A K+F+++ +D + WNS+I GF ++G+ +EAL L+ +M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 407 K---------------------------------------NSVSWNTMISGYAQAGQMDS 427
K N S N ++ YA+ G+++
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM-GREGKKPDQSTF 478
A+ +F M ++N VSW SLI G N +A++ M EG P + TF
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 194
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+NL + N ++ ++A+ G++ +A+ LFD+M +N VSW ++I G N +EA +LF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 125 -------PERDNFSWALMIT--CYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKG 175
P F L C K E R + E + + ++ A+ G
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 176 QFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLA 211
Q A + MP++ ++V + ++L T +G LA
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 232/449 (51%), Gaps = 26/449 (5%)
Query: 291 MIAAYAQDLQIDEAVKLFIKLPHKDGVS---WSTIINGYIRVGKLDEAREVYNQMPCKDI 347
+I ++ ++D A K+F + ++ W+ + GY R G +A VY M C
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLC--- 229
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
I+ G + + + +D + GR A + ++ K
Sbjct: 230 --------SFIEPGNFSISVALKACVDLKDL-----------RVGRGIHA-QIVKRKEKV 269
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+ V +N ++ Y ++G D A +F M ERN+V+WNSLI+ + + M
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
E +T G ++H ILKS D+ + N+L+ MY KCG VE
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
+ +VF + DL SWN +++ YA+NG E F+ M+ V PD +TF+ +LS CS
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLW 647
GL GL LF+ M +F + P EHY+CLVD+LGR G+++EA V+ M K +A +W
Sbjct: 450 DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW 509
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
GSLL +CR+H N+ +GE AA L LEPHN NY+ +SN++A+A W+ V+++R +M+ +
Sbjct: 510 GSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQR 569
Query: 708 RAGKLPGCSWIEVQNQIQCFLSDDSGRLR 736
K GCSW++V+++IQ F++ R
Sbjct: 570 GVKKEAGCSWVQVKDKIQIFVAGGGYEFR 598
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 22/304 (7%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
V YN ++ ++ ++G DAR++FD MS+RN+V+WN++I+ V E LF M E
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 128 -DNFSWALMITCY---TRKGKLEKARELLELV---PDKLESACWNSVIAGYAKKGQFSDA 180
FSWA + T +R L +E+ + +K + NS++ Y K G+ +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNS 236
+VF++M KDL S+N ML Y NG + ++ FE M E V +++ ++SG ++
Sbjct: 392 RRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT 451
Query: 237 GDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNA 290
G LFE++ +P + ++ R GKI EA ++ ++MP K S W +
Sbjct: 452 GLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGS 511
Query: 291 MIAA--YAQDLQIDE--AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
++ + ++ + E A +LF+ PH G ++ + N Y D ++ M +
Sbjct: 512 LLNSCRLHGNVSVGEIAAKELFVLEPHNPG-NYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 347 IAAE 350
+ E
Sbjct: 571 VKKE 574
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 153/326 (46%), Gaps = 45/326 (13%)
Query: 135 MITCYTRKGKLEKARELLELVPDK--LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL 192
+IT ++ +L+ AR++ + V D L W ++ GY++ G DA L
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDA-----------L 221
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR----QLFEK 248
+ Y ML + + G +++ + V+ DL R Q+ ++
Sbjct: 222 IVYVDMLCSFIEPGNFSISV----------------ALKACVDLKDLRVGRGIHAQIVKR 265
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+ V + +L + G +AR++FD M +NVV+WN++I+ ++ +++ E LF
Sbjct: 266 KEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLF 325
Query: 309 IKLPHK-DGVSW---STIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQT 360
K+ + G SW +TI+ RV L +E++ Q+ D+ +LM +
Sbjct: 326 RKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMI 416
G V+ + ++F+ + T+D WN M+ + +G ++E ++LF M + + +++ ++
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVS 442
SG + G + ++F+ M+ VS
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVS 471
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 181/415 (43%), Gaps = 71/415 (17%)
Query: 62 TIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS---WNTMIAGYLHNSMVEEAS 118
++ N + +I++F+ ++ AR++FD ++ +L++ W M GY N +A
Sbjct: 162 SLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDAL 221
Query: 119 KLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELV---PDKLESACWNSVIAGY 171
++ M E NFS ++ + L R + + +K++ +N ++ Y
Sbjct: 222 IVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWNLM- 229
+ G F DA KVF+ M +++V++NS+++ ++ ++ + F KM E+ + SW +
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT 341
Query: 230 --------VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
V+ + ++ + Q+ + P+ +++ + + G++ +RR+FD M
Sbjct: 342 TILPACSRVAALLTGKEIHA--QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYI---------- 327
K++ SWN M+ YA + I+E + LF + DG+++ +++G
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 328 --------------------------RVGKLDEAREVYNQMPCKDIAA------ETALMS 355
R GK+ EA +V MP K A+ + +
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV 410
G + G + A+K L + + M++ +M + +D R+M K+ V
Sbjct: 520 GNVSVGEI--AAKELFVLEPHNPGNY-VMVSNIYADAKMWDNVDKIREMMKQRGV 571
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
GK G+VE + RVF + K+L ++N M++ +A NG I + LF+ M + + +++
Sbjct: 383 GKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFV 442
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPD 157
+++G + E LF+ M S +A ++ R GK+++A +++E +P
Sbjct: 443 ALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 158 KLESACWNSVIAGYAKKGQFS----DAEKVFNLMP 188
K ++ W S++ G S A+++F L P
Sbjct: 503 KPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 266/519 (51%), Gaps = 56/519 (10%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIR 328
A ++FDSMP +NVVSW+A+++ + + + ++ LF ++ + + ++ST +
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 329 VGKLDEAREVYNQMPCKDIAAE------TALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
+ L++ +++ C I E +L+ + GR++EA K+F ++ R I WN
Sbjct: 120 LNALEKGLQIHG--FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKN---------------SVSWNTMI----------- 416
+MIAGF +G +ALD F M + N + S MI
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 417 -SG----------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
SG Y + G + SA F ++E+ ++SW+SLI G+ Q + +A
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
+ + + D + G Q+ +K + V N+++ M
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDM 357
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y KCG V+ AE+ F ++ D+ISW +I+GY +G ++ + F +ML + PD+V +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +LSACSH+G+ +G +LF ++E I+P EHY+C+VDLLGR GRL+EA +++ M
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+K N G+W +LL CRVH ++E+G+ L ++ N +NY+ +SN++ +AG W E
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGN 537
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLS-DDSGRLRP 737
R L K K G SW+E++ ++ F S +DS L P
Sbjct: 538 ARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTP 576
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 206/410 (50%), Gaps = 41/410 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL+T N +I ++ K + A ++FD M +RN+VSW+ +++G++ N ++ + LF M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 126 ER----DNFSWALMITCYTRKGKLEKARELLEL---VPDKLESACWNSVIAGYAKKGQFS 178
+ + F+++ + LEK ++ + ++ NS++ Y+K G+ +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV------VSWNLMVSG 232
+AEKVF + + L+S+N+M+AG+ G AL F M E N+ + ++
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 233 FVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVV 286
++G + + +Q+ P++ + L + + G + AR+ FD + K ++
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGY-----IRVGKLDEARE 337
SW+++I YAQ+ + EA+ LF +L D + S+II + +R GK +A
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 338 VYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
V ++P ET++++ ++ + G VDEA K F ++ +D I W +I G+ + G
Sbjct: 340 V--KLPS---GLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 394 MDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
+++ +F +M + N V + ++S + +G + E +F + E +
Sbjct: 395 GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 186/390 (47%), Gaps = 42/390 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
NS++ +++K G+I++A ++F ++ R+L+SWN MIAG++H +A F +M E
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG-----YAKKGQFSD 179
D F+ ++ + G + +++ + ++ I G Y K G
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN--VVSWNL--MVSGFVN 235
A K F+ + K ++S++S++ GY Q G+ A+ F+++ E N + S+ L ++ F +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 236 SGDLSSARQ---LFEKIPNP------NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
L +Q L K+P+ N+V + + CG + EA + F M K+V+
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL-----VDEAEKCFAEMQLKDVI 380
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIK-LPH---KDGVSWSTIINGYIRVGKLDEAREVYNQM 342
SW +I Y + ++V++F + L H D V + +++ G + E E+++++
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 343 ----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTRDTI-CWNSMIAGFCQSGRMD- 395
K A + L+ + GR+ EA + + + + + W ++++ G ++
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 396 --EALDLFRQMPKKNSVSWNTMISGYAQAG 423
E + ++ KN ++ M + Y QAG
Sbjct: 501 GKEVGKILLRIDAKNPANYVMMSNLYGQAG 530
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 186/411 (45%), Gaps = 55/411 (13%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL------VSW 101
K G++ EA +VF + ++L+++N+MI+ F G S A F M + N+ +
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 102 NTMIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARELLEL 154
+++ M+ ++ + P + +L + Y + G L AR+ +
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSL-VDLYVKCGYLFSARKAFDQ 272
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
+ +K + W+S+I GYA++G+F +A +F K L NS + + + +G+ F
Sbjct: 273 IKEKTMIS-WSSLILGYAQEGEFVEAMGLF-----KRLQELNSQIDSFALSSIIGVFADF 326
Query: 215 --------FEKMAEK-----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+ +A K N +V ++ G + A + F ++ + +SW ++
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 262 CGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV 317
G+ +HG ++ R+F M N+ V + A+++A + I E +LF KL G+
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 318 S-----WSTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMS-----GLIQTGRVDEA 366
++ +++ R G+L EA+ + + MP K ++ L+S G I+ G+ E
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK--EV 504
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEA-----LDLFRQMPKKNSVSW 412
K+ ++ ++ + M + Q+G +E L + + K+ +SW
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSW 555
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H Y+LKSG +L SN LI MY KC A +VF ++ +++SW++L+SG+ L
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK-CMVEDFAIEPLA 612
NG + F +M + + P++ TF L AC +GL + C+ E +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL--KIGFEMMV 142
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVR 636
E + LVD+ + GR+ EA V R
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFR 166
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 269/532 (50%), Gaps = 54/532 (10%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH--KDGV--SWSTIINGYIR 328
ARRL + ++ W+++I ++ + ++ + F+ H ++GV S T
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLS-FLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 329 VGKLDEAREV-YNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
V KL ++ ++ K D +L+SG +G D AS++F+ +D + W
Sbjct: 114 VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM--------------------------- 415
+MI GF ++G EA+ F +M KK V+ N M
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEM-KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE 232
Query: 416 --------------ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
+ Y + D A+ +F M RN+V+W +LI G++Q+ + +
Sbjct: 233 TGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML 292
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
M + P++ T G ++H Y++K+ + LI +Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYV 352
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
KCG +E A VF + ++ +W ++I+G+A +GYA +AF F MLS V P++VTF+
Sbjct: 353 KCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMA 412
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
+LSAC+H GL +G LF M F +EP A+HY+C+VDL GR G LEEA ++ M ++
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPME 472
Query: 642 ANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLR 701
+WG+L G+C +HK+ E+G++AA R+ +L+P ++ Y L+N+++E+ W+EV R+R
Sbjct: 473 PTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVR 532
Query: 702 VLMRDKRAGKLPGCSWIEVQNQIQCFLS-DDSGRLRPETIQIILIGISADIR 752
M+D++ K PG SWIEV+ ++ F++ DD L + + L + +R
Sbjct: 533 KQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 27/298 (9%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
NS+I+GY+ G F A ++F+ KD+V++ +M+ G+ +NG A+ +F +M + V
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 225 SWNLMVSGFVNSG----DLSSARQLFEKIPNPNAV--------SWVTMLCGFARHGKITE 272
+ + V + + D+ R + V S V M + + +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM---YGKCSCYDD 258
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV----SWSTIINGYIR 328
A+++FD MP +NVV+W A+IA Y Q D+ + +F ++ D + S++++
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 329 VGKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
VG L R V+ M I A T L+ ++ G ++EA +F +L ++ W +M
Sbjct: 319 VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAM 378
Query: 385 IAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
I GF G +A DLF M N V++ ++S A G ++ +F +M+ R
Sbjct: 379 INGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 169/403 (41%), Gaps = 68/403 (16%)
Query: 7 WDDTRGE-------NHKIKMTSMKHKLTIGSIGGKHVFNKN-QQIIHLGKLGKVEEAVRV 58
WD G N ++ + +H G I +H F + + L + +
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+ + NS+IS ++ +G A +LFD +++V+W MI G++ N EA
Sbjct: 130 VKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 119 KLFDVMPERDNFSWALMITCYTR-KGKLEKAR-------ELLELVPDKLESACWNSVIAG 170
F M + + + + + GK+E R LE K + +S++
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------------ 218
Y K + DA+KVF+ MP +++V++ +++AGY Q+ + FE+M
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 219 ---------------------------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
E N + ++ +V G L A +FE++
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKL 307
N +W M+ GFA HG +A LF +M +V V++ A+++A A ++E +L
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Query: 308 FIKL-------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
F+ + P D ++ +++ + R G L+EA+ + +MP
Sbjct: 430 FLSMKGRFNMEPKAD--HYACMVDLFGRKGLLEEAKALIERMP 470
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 36/325 (11%)
Query: 50 GKVEEAVRVFSNTIHK----------NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
GKVE+ VR F ++H ++ +S++ ++ K DA+++FD+M RN+V
Sbjct: 215 GKVED-VR-FGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV 272
Query: 100 SWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKAREL-L 152
+W +IAGY+ + ++ +F DV P S L + G L + R +
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHV--GALHRGRRVHC 330
Query: 153 ELVPDKLE--SACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGL 210
++ + +E + ++I Y K G +A VF + K++ ++ +M+ G+ +G
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 211 ALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTML 261
A F M +V V++ ++S + G + R+LF + P A + M+
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 262 CGFARHGKITEARRLFDSMPCKNV-VSWNAMIAA--YAQDLQIDE-AVKLFIKLPHKDGV 317
F R G + EA+ L + MP + V W A+ + +D ++ + A IKL
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG 510
Query: 318 SWSTIINGYIRVGKLDEAREVYNQM 342
++ + N Y DE V QM
Sbjct: 511 RYTLLANLYSESQNWDEVARVRKQM 535
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 120/290 (41%), Gaps = 13/290 (4%)
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGF-----LQNSLYFDALKSLVLMGREGKKPDQS 476
A Q A + ++ +I W+SLI F L L F A + M R G P +
Sbjct: 49 ATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRH---MRRNGVIPSRH 105
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
TF Q H +I+K G +D FV N+LI+ Y+ G + A ++F
Sbjct: 106 TFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA 164
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
E D+++W ++I G+ NG A EA F +M V +++T + +L A G
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGR 224
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+ +E ++ S LVD+ G+ ++A V M + N W +L+
Sbjct: 225 SVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAGYVQ 283
Query: 657 HKNLEIGE--FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+ + G F M S++ P+ + LS A G R+ M
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC-AHVGALHRGRRVHCYM 332
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 293/567 (51%), Gaps = 62/567 (10%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN---- 251
S++ Y + G M A+ F +E++V +N ++SGFV +G A + + ++
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 252 PNAVSWVTMLCGFARHGKITEARRL--------FDSMPCKNVVSWNAMIAAYAQDLQIDE 303
P+ ++ ++L G + ++++ +++ FDS + + ++ +Y++ + +++
Sbjct: 159 PDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDS----DCYVGSGLVTSYSKFMSVED 213
Query: 304 AVKLFIKLPHKD-GVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR 362
A K+F +LP +D V W+ ++NGY ++ + ++A V+++M + +
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV------------- 260
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISG 418
+R TI S+++ F SG +D + K S V N +I
Sbjct: 261 ------------SRHTI--TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR---EGKKPDQ 475
Y ++ ++ A +IF+AM+ER++ +WNS++ + D +L L R G +PD
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSVLC---VHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN----DLFVSNALIAMYAKCGRVESAEQ 531
T + G ++H Y++ SG +N + F+ N+L+ MY KCG + A
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
VF ++ D SWN +I+GY + A F M V PD++TF+G+L ACSH+G
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
N+G + M + I P ++HY+C++D+LGR +LEEA+ + + N +W S+L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
+CR+H N ++ A RL ELEP + Y+ +SN++ EAG++EEV +R MR + K
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPE 738
PGCSWI ++N + F + + + PE
Sbjct: 604 TPGCSWIVLKNGVHTFFTGN--QTHPE 628
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 182/416 (43%), Gaps = 55/416 (13%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + AV VF + +++ YN++IS F NG DA + + +M ++
Sbjct: 108 KCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPS 166
Query: 108 YLHNSMVEEASKL-------FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLE 160
L S E S + F + + D + + ++T Y++ +E A+++ + +PD+ +
Sbjct: 167 LLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD 226
Query: 161 SACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKM--GLALHF 214
S WN+++ GY++ +F DA VF+ M + + + S+L+ +T +G + G ++H
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG 286
Query: 215 F--EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE 272
+ + ++V N ++ + S L A +FE + + +W ++LC G
Sbjct: 287 LAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG 346
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKL 332
LF+ M C + D V+ +T++ R+ L
Sbjct: 347 TLALFERMLCSGI---------------------------RPDIVTLTTVLPTCGRLASL 379
Query: 333 DEAREVYNQMPCKDIA--------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+ RE++ M + +LM ++ G + +A +F+ + +D+ WN M
Sbjct: 380 RQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 439
Query: 385 IAGFCQSGRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
I G+ + ALD+F R K + +++ ++ + +G ++ N ME
Sbjct: 440 INGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 138/339 (40%), Gaps = 47/339 (13%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L + + G + N I GK +EEA +F ++L T+NS++ V G
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 84 SDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCY 139
LF++M + ++V+ T++ +L + R+ + ++
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLP---------TCGRLASLRQGREIHGYMIVSGLL 395
Query: 140 TRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
RK + E + NS++ Y K G DA VF+ M VKD S+N M+
Sbjct: 396 NRK----SSNEFIH-----------NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMI 440
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMV---------SGFVNSGD--LSSARQLFEK 248
GY LAL F M V + SGF+N G L+ ++
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMP-CKNVVSWNAMIAAYA----QDLQIDE 303
+P + + V + G R K+ EA L S P C N V W +++++ +DL +
Sbjct: 501 LPTSDHYACVIDMLG--RADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVA 558
Query: 304 AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+L P G + + N Y+ GK +E +V + M
Sbjct: 559 GKRLHELEPEHCG-GYVLMSNVYVEAGKYEEVLDVRDAM 596
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 494 GNQLHEYILKSGYIND-LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
G Q+H ++++ G+++D +L+ MYAKCG + A VF E D+ +N+LISG+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFV 137
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
+NG ++A + +++M + ++PD+ TF +L
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLL 168
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 29/223 (13%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL 120
N N +NS++ ++ K G + DAR +FD M ++ SWN MI GY S E A +
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDM 455
Query: 121 FDVM----PERDNFSWALMITCYTRKGKLEKARELL-------ELVPDKLESACWNSVIA 169
F M + D ++ ++ + G L + R L ++P AC VI
Sbjct: 456 FSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC---VID 512
Query: 170 GYAKKGQFSDAEKVFNLMPVKD-LVSYNSMLAGYTQNGKMGLALHFFEKMAE---KNVVS 225
+ + +A ++ P+ D V + S+L+ +G LAL +++ E ++
Sbjct: 513 MLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGG 572
Query: 226 WNLMVSGFVNSG------DLSSA--RQLFEKIPNPNAVSWVTM 260
+ LM + +V +G D+ A +Q +K P SW+ +
Sbjct: 573 YVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTP---GCSWIVL 612
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 259 bits (662), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 263/472 (55%), Gaps = 24/472 (5%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST-IINGY 326
GK+ +AR++FD MP +++ MI A A++ E++ F ++ +KDG+ I+
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM-YKDGLKLDAFIVPSL 123
Query: 327 IRVGKLDEAREVYNQMPCKDIA----AETALMSGLI----QTGRVDEASKMFNQLSTRDT 378
++ + RE + C + ++ ++S LI + G V A K+F+ L +D
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQA 434
+ +N+MI+G+ + + DEAL+L + M K + ++WN +ISG++ + I +
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 435 M----EERNIVSWNSLITGFL---QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
M + ++VSW S+I+G + QN FDA K ++ G P+ +T
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML---THGLYPNSATIITLLPACTT 300
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
+ G ++H Y + +G + FV +AL+ MY KCG + A +F +++NS+
Sbjct: 301 LAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSM 360
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFA 607
I YA +G A +A + F QM + D +TF +L+ACSHAGL + G +LF M +
Sbjct: 361 IFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR 420
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
I P EHY+C+VDLLGR G+L EA+ +++ M ++ + +WG+LL ACR H N+E+ AA
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAA 480
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
L+ELEP N+ N + L++++A AG WE V R++ +++ KR + G SW+E
Sbjct: 481 KHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 206/476 (43%), Gaps = 86/476 (18%)
Query: 62 TIHKNLVTYN---------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS 112
+H +LVT +++ + + GK+ DAR++FD+M +R++ MI N
Sbjct: 37 VLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNG 96
Query: 113 MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL----------ESA 162
+E+ F R+ + L + + L+ +R LL+ K+ ES
Sbjct: 97 YYQESLDFF-----REMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 163 CW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA- 219
+ +S+I Y+K G+ +A KVF+ + +DLV +N+M++GY N + AL+ + M
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 220 ---EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR------ 266
+ +V++WN ++SGF + + ++ E + P+ VSW +++ G
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 267 ----------HGKITEARRLFDSMPCKNVVSW-----------------------NAMIA 293
HG + + +P +++ +A++
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAA 349
Y + I EA+ LF K P K V+++++I Y G D+A E+++QM D
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQM 404
TA+++ G D +F + + I + M+ ++G++ EA ++ + M
Sbjct: 392 FTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 405 P-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
+ + W +++ G M+ A + + E + NS G L SLY +A
Sbjct: 452 RMEPDLFVWGALLAACRNHGNMELARIAAKHLAE--LEPENS-GNGLLLTSLYANA 504
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 47/315 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G+V A +VFS+ ++LV +N+MIS +A N + +A L M + ++++WN
Sbjct: 164 KFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNA 223
Query: 104 MIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
+I+G+ H E+ S++ ++M + D SW +I+ + EKA + + +
Sbjct: 224 LISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM---- 279
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY---NSMLAGYTQNGKMGLALHFFE 216
G + ++ + L+P ++Y + GY+ GL H F
Sbjct: 280 ------------LTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV--VTGLEDHGFV 325
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+ A ++ + G +S A LF K P V++ +M+ +A HG +A L
Sbjct: 326 RSA---------LLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVEL 376
Query: 277 FDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYI 327
FD M + +++ A++ A + D LF+ + +K + ++ +++
Sbjct: 377 FDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG 436
Query: 328 RVGKLDEAREVYNQM 342
R GKL EA E+ M
Sbjct: 437 RAGKLVEAYEMIKAM 451
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
H F ++ + GK G + EA+ +F T K VT+NSMI +A +G A +LFD+M
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 94 ---SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKL 145
+ + +++ ++ H + + LF +M + +A M+ R GKL
Sbjct: 382 ATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKL 441
Query: 146 EKARELLELVPDKLESACWNSVIAGYAKKG 175
+A E+++ + + + W +++A G
Sbjct: 442 VEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G LH +++ SG ++ L+ Y +CG+V A +VF + D+ +I A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
NGY E+ F++M + + D +L A S L + + C+V F+ E A
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 614 HYSCLVDLLGRMGRLEEAFNV 634
S L+D+ + G + A V
Sbjct: 154 IVSSLIDMYSKFGEVGNARKV 174
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 261/510 (51%), Gaps = 18/510 (3%)
Query: 249 IPNPNAVSWVTML------CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQID 302
+P+ ++S T L C R K A + + V + + A ++
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 303 EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM---SGLIQ 359
A +F ++ HK+ W+TII G+ R + A ++ M C + + + S
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 360 TGRVDEASK-------MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
GR+ +A + + D+ N+M+ + G + EA +F M + V+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N+MI G+A+ G +D A+N+F M +RN VSWNS+I+GF++N + DAL M + K
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
PD T + G +HEYI+++ + + V ALI MY KCG +E V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F L WNS+I G A NG+ A F ++ + PD V+FIG+L+AC+H+G
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
++ + F+ M E + IEP +HY+ +V++LG G LEEA +++ M V+ + +W SLL
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
ACR N+E+ + AA L +L+P Y+ LSN +A G +EE R+LM++++ K
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKE 495
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
GCS IEV ++ F+S G P++ +I
Sbjct: 496 VGCSSIEVDFEVHEFIS--CGGTHPKSAEI 523
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 20/321 (6%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F +N + G + EA R+F I ++V +NSMI FAK G I A+ LFD+M QR
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL 152
N VSWN+MI+G++ N ++A +F M E+ D F+ ++ G E+ R +
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 153 ELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
E + +L S ++I Y K G + VF P K L +NSM+ G NG
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 210 LALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTM 260
A+ F ++ E + VS+ +++ +SG++ A + F + P+ + M
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 261 LCGFARHGKITEARRLFDSMPC-KNVVSWNAMIAAYAQDLQID---EAVKLFIKLPHKDG 316
+ G + EA L +MP ++ V W+++++A + ++ A K KL +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 317 VSWSTIINGYIRVGKLDEARE 337
+ + N Y G +EA E
Sbjct: 462 CGYVLLSNAYASYGLFEEAVE 482
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 22/289 (7%)
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNS 236
VF + K+ +N+++ G++++ +A+ F M + +++ + +
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 237 GDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
G RQL + ++ TML + G + EA R+F M +VV+WN+MI
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+A+ ID+A LF ++P ++GVSW+++I+G++R G+ +A +++ +M KD+ +
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 353 LMSGLIQTGR---VDEASKMFNQLSTRDTICWNSMIAG-----FCQSGRMDEALDLFRQM 404
M L+ E + ++ R+ NS++ +C+ G ++E L++F
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITG 449
PKK WN+MI G A G + A ++F +E E + VS+ ++T
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 188/420 (44%), Gaps = 38/420 (9%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM--------SQRNLVSWNTMIA 106
A VF+ HKN +N++I F+++ A +F M QR +++ ++
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFK 134
Query: 107 GYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKA-RELLELVPDKLES 161
Y + +L ++ E D+F M+ Y G L +A R L ++ +
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI--GFDV 192
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
WNS+I G+AK G A+ +F+ MP ++ VS+NSM++G+ +NG+ AL F +M EK
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 222 NVVSWNLMVSGFVNS----GDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEA 273
+V + +N+ G R + E I N++ ++ + + G I E
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRV 329
+F+ P K + WN+MI A + + A+ LF +L D VS+ ++
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 330 GKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQLST-RDTICWNS 383
G++ A E + M K I T +++ L G ++EA + + DT+ W+S
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 384 MIAGFCQSGRMD---EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+++ + G ++ A +++ + + + + YA G + A M+ER +
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 161/373 (43%), Gaps = 66/373 (17%)
Query: 26 LTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVF------SNTIHKNLVTYNSMISVFAK 79
L I K+ F N I + E A+ +F S ++ +TY S+ + +
Sbjct: 79 LVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGR 138
Query: 80 NGKISDARQL-----------------------------------FDKMSQRNLVSWNTM 104
G+ D RQL F M ++V+WN+M
Sbjct: 139 LGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSM 198
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA----RELLE--LVPD- 157
I G+ ++++A LFD MP+R+ SW MI+ + R G+ + A RE+ E + PD
Sbjct: 199 IMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG 258
Query: 158 ----KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
L +AC G +++G++ V N + +V +++ Y + G + L+
Sbjct: 259 FTMVSLLNAC---AYLGASEQGRWIHEYIVRNRFELNSIV-VTALIDMYCKCGCIEEGLN 314
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGK 269
FE +K + WN M+ G N+G A LF ++ P++VS++ +L A G+
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 270 ITEARRLFDSMPCKNVVS-----WNAMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWSTII 323
+ A F M K ++ + M+ ++EA L +P +D V WS+++
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Query: 324 NGYIRVGKLDEAR 336
+ ++G ++ A+
Sbjct: 435 SACRKIGNVEMAK 447
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 245/456 (53%), Gaps = 43/456 (9%)
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNS 383
R G + EA+ + ++ D+ + L++ LI + G V+ A ++F+ + R + WN+
Sbjct: 73 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132
Query: 384 MIAGFCQSGRMDEALDLFRQM----------------------------PKKNSVSWNT- 414
MI + ++ EALD+F +M K + +S T
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 415 ----------MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
++ YA+ G + A +F++M++++ V+W+S++ G++QN Y +AL
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
R + +Q T G Q+H I KSG+ +++FV+++ + MYAKCG
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+ + +F+ ++ +L WN++ISG+A + E F++M + + P++VTF +LS
Sbjct: 313 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA 644
C H GL +G FK M + + P HYSC+VD+LGR G L EA+ +++ + A
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 645 GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+WGSLL +CRV+KNLE+ E AA +L ELEP NA N++ LSN++A +WEE+ + R L+
Sbjct: 433 SIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 492
Query: 705 RDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
RD K+ G SWI++++++ F +SG R I
Sbjct: 493 RDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREI 528
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 175/384 (45%), Gaps = 40/384 (10%)
Query: 40 NQQIIH-----LGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLF 90
N+ ++H + G V EA I +L N +I+ ++K G + ARQ+F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 91 DKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDNFSWALMITCYTRKGKLEKAR 149
D M +R+LVSWNTMI Y N M EA +F ++ E FS + + + G A
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 150 ELLELVPDKLESACWNSVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
E +L +++ ++ G YAK G DA +VF M K V+++SM+AGY
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 204 QNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN------ 253
QN AL + + E+N + + ++ N L +Q+ I
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 254 -AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP 312
A S V M +A+ G + E+ +F + KN+ WN +I+ +A+ + E + LF K+
Sbjct: 300 VASSAVDM---YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 313 ----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPC-----KDIAAETALMSGLIQTGRV 363
H + V++S++++ G ++E R + M ++ + ++ L + G +
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 364 DEASKMFNQLSTRDTIC-WNSMIA 386
EA ++ + T W S++A
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLA 440
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H + S G +VF + + K G + E+ +FS KNL +N++IS FAK+ +
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 84 SDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WAL 134
+ LF+KM Q N V+++++++ H +VEE + F +M S ++
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAG--YAKKGQFSD--AEKVFNLMP 188
M+ R G L +A EL++ +P ++ W S++A K + ++ AEK+F L P
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 200/729 (27%), Positives = 341/729 (46%), Gaps = 71/729 (9%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ + + +N+ + +IS +A GK + + ++F +++R++ WN++I + N +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 118 SKLFDVM----PERDNFSWALMITC-----YTRKGKLEKARELLELVPDKLESACWNSVI 168
F M D+F+ ++++ + G L D+ +A S +
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR-NTAVGASFV 168
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM--AEKNVVSW 226
Y+K G DA VF+ MP +D+V++ ++++G+ QNG+ L + KM A +V
Sbjct: 169 YFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP 228
Query: 227 N--LMVSGF---VNSGDLSSARQLFE-KIPNPNAVSWV---TMLCGFARHGKITEARRLF 277
N + GF N G L R L + N A S +M +++ G +EA F
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLD 333
+ +++ SW ++IA+ A+ ++E+ +F ++ H DGV S +IN ++ +
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 334 EARE----VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGF 388
+ + V D +L+S + + A K+F ++S + WN+M+ G+
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 389 CQSGRMDEALDLFRQMPK----------------------------------KNSVSW-- 412
+ + ++LFR++ K S+
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 413 ---NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
N++I Y + G + A +F + N+++WN++I ++ A+ M E
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE 527
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
KP T + G +H YI ++ + +L +S ALI MYAKCG +E +
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
++F A D + WN +ISGY ++G A F QM +V P TF+ +LSAC+HA
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
GL QG LF M + ++P +HYSCLVDLL R G LEEA + V M + +WG+
Sbjct: 648 GLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGT 706
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
LL +C H E+G A R +P N YI L+NM++ AG+WEE ER R +MR+
Sbjct: 707 LLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Query: 710 GKLPGCSWI 718
GK G S +
Sbjct: 767 GKRAGHSVV 775
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL- 98
N I GK+G + A R+F N++T+N+MI+ + + A LFD+M N
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFK 530
Query: 99 ---VSWNTMIAGYLHNSMVEEASKLFDVMPERD---NFSW-ALMITCYTRKGKLEKAREL 151
++ T++ ++ +E + + E + N S A +I Y + G LEK+REL
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 152 LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
+ ++ ++ CWN +I+GY G A +F+ M D+ ++ ++L+ T G
Sbjct: 591 FD-AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 208 MGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLC 262
+ F KM + N+ ++ +V SG+L A +P +P+ V W T+L
Sbjct: 650 VEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 263 GFARHGKITEARRL 276
HG+ R+
Sbjct: 710 SCMTHGEFEMGIRM 723
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 19/194 (9%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHK-NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
++ G L + + R + T H+ NL ++I ++AK G + +R+LFD +Q++ V WN
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERD----NFSWALMITCYTRKGKLEKARELL------ 152
MI+GY + VE A LFD M E D ++ +++ T G +E+ ++L
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Query: 153 ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLA 211
++ P+ +C ++ ++ G +AE MP D V + ++L+ +G+ +
Sbjct: 664 DVKPNLKHYSCLVDLL---SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMG 720
Query: 212 LHFFEKMAEKNVVS 225
+ +MAE+ V S
Sbjct: 721 I----RMAERAVAS 730
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 285/559 (50%), Gaps = 32/559 (5%)
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
N +++ +V + AR+LF+ +P N VSW M+ G+ G E +LF SM
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 287 SWNAMIAAY-----AQDLQIDEAVKL---FIK---LPHKDGVSWSTIINGYIRVGKLDEA 335
N +A + +I+E + F+K + H+ +T++ Y EA
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE--FVRNTLVYMYSLCSGNGEA 190
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM-----IAGFCQ 390
V + +P D++ ++ +SG ++ G E + + + D + WN++ + F
Sbjct: 191 IRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSN 249
Query: 391 SGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
++ AL + +M + + +I+ Y + G++ A+ +F +NI ++
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTI 309
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
+ + Q+ + +AL M + P++ TF + G+ LH +LKSGY
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY 369
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
N + V NAL+ MYAK G +E A + F+ + D+++WN++ISG + +G EA +AF +
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M+ +P+++TFIG+L ACSH G QGL F +++ F ++P +HY+C+V LL + G
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
++A + +R ++ + W +LL AC V +N +G+ A E P+++ Y+ LSN
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSN 549
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDS---------GRLRP 737
+HA++ WE V ++R LM ++ K PG SWI ++NQ FL++D+ +++
Sbjct: 550 IHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKE 609
Query: 738 ETIQIILIGISADIRDKFN 756
+I +G S D+ F+
Sbjct: 610 VMSKIKPLGYSPDVAGAFH 628
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 181/381 (47%), Gaps = 34/381 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
NS+I+++ K + AR+LFD M +RN+VSW M+ GY ++ E KLF M
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 127 RDN-FSWALMITCYTRKGKLEKAREL------LELVPDKLESACWNSVIAGYAKKGQFSD 179
R N F ++ + G++E+ ++ L+ + N+++ Y+ +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVR---NTLVYMYSLCSGNGE 189
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM-----VSGFV 234
A +V + +P DL ++S L+GY + G L K A ++ V WN + + F
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFS 248
Query: 235 NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
N DL+ A Q+ ++ N + ++ + + GK+ A+R+FD +N+
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 291 MIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
++ AY QD +EA+ LF K+ K+ +++ ++N + L + ++ + + K
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKS 367
Query: 347 -----IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ AL++ ++G +++A K F+ ++ RD + WN+MI+G G EAL+ F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAF 427
Query: 402 RQMPKKNSVSWNTMISGYAQA 422
+M + G QA
Sbjct: 428 DRMIFTGEIPNRITFIGVLQA 448
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 21/155 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------ 124
N++++++AK+G I DAR+ F M+ R++V+WNTMI+G H+ + EA + FD M
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 125 PERDNFSWALMITCYTRKGKLEKAREL-------LELVPDKLESACWNSVIAGYAKKGQF 177
P R F L + G +E+ ++ PD C ++ +K G F
Sbjct: 437 PNRITFIGVLQACSHI--GFVEQGLHYFNQLMKKFDVQPDIQHYTC---IVGLLSKAGMF 491
Query: 178 SDAEKVFNLMPVK-DLVSYNSML-AGYT-QNGKMG 209
DAE P++ D+V++ ++L A Y +N ++G
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLG 526
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 492 QVGNQLHEYIL---KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
++G +H +++ +S D + N+LI +Y KC A ++F + +++SW +++
Sbjct: 48 RIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMM 107
Query: 549 SGYALNGYAIEAFKAFKQM-LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
GY +G+ E K FK M S E P++ + +CS++G +G C ++
Sbjct: 108 KGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLK 164
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/575 (29%), Positives = 277/575 (48%), Gaps = 88/575 (15%)
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+M +V N ++ V GD + + LF PN S+ M+ G
Sbjct: 59 QMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTN---------- 108
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDE-- 334
+WN AA L + +K P D +++ + +I KL+E
Sbjct: 109 ----------TWNDHEAA----LSLYRRMKFSGLKP--DKFTYNFV---FIACAKLEEIG 149
Query: 335 -AREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
R V++ + +D+ +L+ + G+V A K+F++++ RDT+ WNSMI+G+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 390 QSGRMDEALDLFRQMPKK---------------------------------------NSV 410
++G +A+DLFR+M ++ ++
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+ +IS Y + G +DSA +F M +++ V+W ++IT + QN +A K M + G
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
PD T ++G Q+ + + ++++V+ L+ MY KCGRVE A
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 531 QVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+VF A+ + +WN++I+ YA G+A EA F +M V P +TFIG+LSAC HAG
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAG 446
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
L +QG F M F + P EHY+ ++DLL R G L+EA+ + K + + ++
Sbjct: 447 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 506
Query: 651 LGACRVHKNLEIGEFAAMRLSEL-EPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
LGAC K++ I E A L E+ E NA NY+ SN+ A+ W+E ++R LMRD+
Sbjct: 507 LGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGV 566
Query: 710 GKLPGCSWIEVQNQIQCFLS---------DDSGRL 735
K PGCSWIE++ ++ FL+ +DSG L
Sbjct: 567 VKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 601
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 198/411 (48%), Gaps = 28/411 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+F + +++ +S+I ++AK G++ AR+LFD++++R+ VSWN+MI+GY ++A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAG 170
LF M E D + M+ + G L R L E+ K L + + +I+
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SW 226
Y K G A +VFN M KD V++ +M+ Y+QNGK A F +M + V +
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG----FARHGKITEARRLFDSMPC 282
+ ++S + G L +Q+ + + + G + + G++ EA R+F++MP
Sbjct: 338 STVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLF--IKLPHKDGVSWSTIINGYIRVGKLDEAREVYN 340
KN +WNAMI AYA EA+ LF + +P D +++ +++ + G + + ++
Sbjct: 398 KNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFH 456
Query: 341 QMP-----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR-- 393
+M I T ++ L + G +DEA + + + + I G C +
Sbjct: 457 EMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDV 516
Query: 394 --MDEALDLFRQMPK-KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
++A+ + +M + KN+ ++ + A D + + M +R +V
Sbjct: 517 AIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVV 567
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G F ++ I GK G ++ A RVF+ I K+ V + +MI+V+++NGK S+A +LF +
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 93 MSQRN-----------LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR 141
M + L + ++ A L + AS+L + + + ++ Y +
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL---SLQHNIYVATGLVDMYGK 381
Query: 142 KGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM--PVKDLVSYNSML 199
G++E+A + E +P K E A WN++I YA +G +A +F+ M P D +++ +L
Sbjct: 382 CGRVEEALRVFEAMPVKNE-ATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVL 439
Query: 200 AGYTQNGKMGLALHFFEKMAE-----KNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPN 253
+ G + +F +M+ + + ++ +G L A + E+ P P+
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPD 499
Query: 254 AVSWVTML--CGFARHGKITEA--RRLFDSMPCKN----VVSWNAMIAAYAQDLQI-DEA 304
+ +L C + I E R L + KN V+S N + D+++ DE+
Sbjct: 500 EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL-----ADMKMWDES 554
Query: 305 VKL--------FIKLPHKDGVSWSTI 322
K+ +K P G SW I
Sbjct: 555 AKMRALMRDRGVVKTP---GCSWIEI 577
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 181/649 (27%), Positives = 312/649 (48%), Gaps = 100/649 (15%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N++++ Y + G + +K F+ + D+ S+ ++L+ + G + A F+KM E++ V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 225 S-WNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML--CGFAR-------HGKI 270
+ WN M++G SG ++ +LF ++ + + T+L C + H +
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLV 215
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF--IKLPHKDGVSWSTIINGYIR 328
+A S +VV NA+I Y + +A +F + +D V+++ +I+G
Sbjct: 216 IKAGFFIAS----SVV--NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG 269
Query: 329 VGKLDEAREVYNQM-----------------PCKDIAAETALMSGLIQTGR--------- 362
K DE+ V+ +M C A + I+TG
Sbjct: 270 F-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNA 328
Query: 363 ----------VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKN 408
A K+F L +D + WN+MI+ + Q+ A+ ++++M K +
Sbjct: 329 TMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPD 388
Query: 409 SVSW--------------------------------NTMISGYAQAGQMDSAENIFQAME 436
++ N +IS Y++ GQ++ A+ +F+
Sbjct: 389 EFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 437 ERNIVSWNSLITGFLQNSLYFDALK--SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG 494
+N++SWN++I+GF N F+ L+ S +L PD T +G
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
+Q H Y+L+ G + + NALI MY++CG ++++ +VF + D++SWNSLIS Y+ +
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRH 568
Query: 555 GYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G A +K M E +V+PD TF +LSACSHAGL +GL++F MVE + +
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVD 628
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMD--VKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
H+SCLVDLLGR G L+EA ++V+ + + + +W +L AC H +L++G+ A L
Sbjct: 629 HFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLM 688
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEV 720
E E + S Y+ LSN++A AG W+E E R + A K GCSW+ +
Sbjct: 689 EKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 142/698 (20%), Positives = 294/698 (42%), Gaps = 150/698 (21%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
+ N N+++ L + G+ A+++F++ +H+ SV + I+ AR L D +
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFAD-VHRCTTLRPDQYSV---SLAITTARHLRDTIFG 76
Query: 96 RNLVSW-------------NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRK 142
+ + NT+++ Y + K FD + E D +SW +++ +
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQ-------FSDAEKV------FNLMPV 189
G +E A E+ + +P++ + A WN++I G + G F + K+ F +
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 190 KDLVSYNSMLAGYTQNG---KMG-----------LALHF-----------FEK--MAEKN 222
+ Y S+ G + K G + ++F FE+ +A ++
Sbjct: 197 LSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 223 VVSWNLMV---SGFVNSGDLSSARQLFEKIPNPNAVSWVTML------------------ 261
V++N+++ +GF L R++ E P +++V+++
Sbjct: 257 QVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIK 316
Query: 262 CGFARHGKITE--------------ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
G+ ++ ++ A ++F+S+ K++V+WN MI++Y Q A+ +
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 308 FIKLPHKDGVSWSTIINGYIRVGKLD-EAREVYNQMPCK-----DIAAETALMSGLIQTG 361
+ ++ H GV G + LD + E+ K I AL+S + G
Sbjct: 377 YKRM-HIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF--------RQMPK------- 406
++++A +F + ++ I WN++I+GF +G E L+ F R +P
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 407 --------------------------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
K ++ N +I+ Y+Q G + ++ +F M E+++
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKK-PDQSTFXXXXXXXXXXXXXQVGNQLHE 499
VSWNSLI+ + ++ +A+ + M EGK PD +TF + G ++
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFN 615
Query: 500 YILK-SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-----VDLISWNSLISGYAL 553
+++ G I ++ + L+ + + G ++ AE + E VD+ W +L S A
Sbjct: 616 SMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDV--WWALFSACAA 673
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
+G ++ K ++L E+ D ++ + + + AG+
Sbjct: 674 HG-DLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGM 710
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 197/434 (45%), Gaps = 37/434 (8%)
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARH------GKI 270
+++ N ++G SG+ +A +LF + P+ S V++ ARH G
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYS-VSLAITTARHLRDTIFGGQ 78
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG 330
+ + C + VS N +++ Y + + K F ++ D SW+T+++ ++G
Sbjct: 79 VHCYAIRSGLLCHSHVS-NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 331 KLDEAREVYNQMPCKD-IAAETALMSGLIQTGRVDEASKMF---NQLSTRDTICWNSMIA 386
++ A EV+++MP +D +A A+++G ++G + + ++F ++L R + I
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 387 GFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEE--RNI 440
C G +D + + K S N +I+ Y + A +F+ + R+
Sbjct: 198 SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 441 VSWNSLITGFLQNSLYFDALKSLVL---MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
V++N +I G F +SL++ M +P TF +G+Q+
Sbjct: 258 VTFNVVIDGLAG----FKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQV 310
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H +K+GY VSNA + MY+ +A +VF ++E DL++WN++IS Y
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
A +K+M V PD+ TF +L+ L L++ + + F + E +
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNA 426
Query: 618 LVDLLGRMGRLEEA 631
L+ + G++E+A
Sbjct: 427 LISAYSKNGQIEKA 440
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 29/295 (9%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD-------- 122
N++IS ++KNG+I A LF++ ++NL+SWN +I+G+ HN E + F
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL-ESACWNSVIAGYAKKGQFSDAE 181
++P+ S L I T L L + E+ N++I Y++ G ++
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV-----SWNLMVSGFVNS 236
+VFN M KD+VS+NS+++ Y+++G+ A++ ++ M ++ V +++ ++S ++
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 237 GDLSSARQLFEK-------IPNPNAVSWVTMLCGFARHGKITEARRLF---DSMPCKNVV 286
G + ++F I N + S + L G R G + EA L + V
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG--RAGHLDEAESLVKISEKTIGSRVD 662
Query: 287 SWNAMIAAYAQ--DLQIDEAV-KLFIKLPHKDGVSWSTIINGYIRVGKLDEAREV 338
W A+ +A A DL++ + V KL ++ D + + N Y G EA E
Sbjct: 663 VWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEET 717
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 157/350 (44%), Gaps = 64/350 (18%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVF--AKNG 81
H L I + K+ N + A +VF + K+LVT+N+MIS + AK G
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 82 KISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVE--EASKLFDVMPERDNFSWALM 135
K A ++ +M + + ++ +++A L ++E +A + + + S AL
Sbjct: 371 K--SAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNAL- 427
Query: 136 ITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKG-------QFS---------- 178
I+ Y++ G++EKA L E K WN++I+G+ G +FS
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRK-NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 179 -DAEKVFNLMPV-----------------------KDLVSYNSMLAGYTQNGKMGLALHF 214
DA + L+ + K+ + N+++ Y+Q G + +L
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGK 269
F +M+EK+VVSWN ++S + G+ +A ++ + + P+A ++ +L + G
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 270 ITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK 314
+ E +F+SM +NV ++ ++ + +DEA L +K+ K
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESL-VKISEK 655
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 243/461 (52%), Gaps = 38/461 (8%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTII 323
G ++ AR++FD +P + ++N MI+ Y + + E + L ++ + DG + S ++
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 324 N-----GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT 378
G + R V+ ++ D+ + L++ L+ T
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDT------------------ 184
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+ +SG+++ A +F M +N V +MISGY G ++ AE IF + +
Sbjct: 185 ---------YVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 439 NIVSWNSLITGFLQNSLYFD-ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
+IV +N+++ GF ++ ++ + M R G P+ STF +VG Q+
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H I+KSG + + ++L+ MYAKCG + A +VF ++ ++ SW S+I GY NG
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
EA + F +M + P+ VTF+G LSACSH+GL ++G ++F+ M D++++P EHY+C
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-H 676
+VDL+GR G L +AF R M + ++ +W +LL +C +H N+E+ AA L +L
Sbjct: 416 IVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADK 475
Query: 677 NASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW 717
Y+ LSN++A +W+ V ++R +M+ +R K G SW
Sbjct: 476 RPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 198/439 (45%), Gaps = 73/439 (16%)
Query: 79 KNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD---------------- 122
K G +S ARQ+FD++ + L ++N MI+GYL + +V+E L
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 123 ------------VMP----------------ERDNFSWALMITCYTRKGKLEKARELLEL 154
++P E D+ ++ Y + GKLE AR + E
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG---KMGLA 211
+ D+ C S+I+GY +G DAE++FN VKD+V YN+M+ G++++G K +
Sbjct: 201 MKDE-NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 212 LHFFEKMA--EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTM----LCGFA 265
++ + A N+ ++ ++ +Q+ +I + + M L +A
Sbjct: 260 MYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWST 321
+ G I +ARR+FD M KNV SW +MI Y ++ +EA++LF ++ + V++
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 322 IINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR 376
++ G +D+ E++ M K A + L+ + G +++A + + R
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 377 -DTICWNSMIAGFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
D+ W ++++ G ++ A +LF+ K ++ + + YA + D+ I
Sbjct: 440 PDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKI 499
Query: 432 FQAMEERNIV-----SWNS 445
+ M+ R I SW S
Sbjct: 500 REVMKRRRISKTIGRSWTS 518
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 47/334 (14%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R+ + + V +++ + K+GK+ AR +F+ M N+V +MI+GY++ VE+
Sbjct: 165 RIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVED 224
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLES------ACWNSVIAG 170
A ++F+ +D + M+ ++R G E A+ +++ + + + SVI
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSG--ETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+ ++V + + ++ +S+L Y + G + A F++M EKNV SW
Sbjct: 283 CSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSW 342
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
M+ G+ +G+ A +LF ++ PN V+++ L + G + + +F+SM
Sbjct: 343 TSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM-- 400
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
Q D ++K K+ H ++ I++ R G L++A E M
Sbjct: 401 -----------------QRDYSMK--PKMEH-----YACIVDLMGRAGDLNKAFEFARAM 436
Query: 343 PCK---DIAAETALMSGLIQTGRVDEASKMFNQL 373
P + DI A AL+S G V+ AS ++L
Sbjct: 437 PERPDSDIWA--ALLSSCNLHGNVELASIAASEL 468
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K GK+E A VF +N+V SMIS + G + DA ++F+ +++V +N M+ G
Sbjct: 187 KSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEG 246
Query: 108 YLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELLELVPDKLESA 162
+ + + S + +R F ++A +I + E +++ + ++S
Sbjct: 247 FSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQI---MKSG 303
Query: 163 CWNSVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+ + G YAK G +DA +VF+ M K++ S+ SM+ GY +NG AL F
Sbjct: 304 VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFT 363
Query: 217 KMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARH 267
+M E N V++ +S +SG + ++FE + P + ++ R
Sbjct: 364 RMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRA 423
Query: 268 GKITEARRLFDSMP 281
G + +A +MP
Sbjct: 424 GDLNKAFEFARAMP 437
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ + G + A +F + + + ++N +I+G+L++ L + L + M G+K D T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 479 XXXXXXXXXXXXXQVGNQ-----LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
+ + +H I+K D + AL+ Y K G++ESA VF
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG-LA 592
++ +++ S+ISGY G+ +A +++ + V D V + M+ S +G A
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDA----EEIFNTTKVKDIVVYNAMVEGFSRSGETA 254
Query: 593 NQGLDLFKCM 602
+ +D++ M
Sbjct: 255 KRSVDMYISM 264
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
+ G ++H I+K+G+ DL +S L+ ++ KCG + A QVF + L ++N +ISGY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG---LANQGL------DLFKCM 602
+G E ++M D T +L A + G + + L + KC
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 603 VE--DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
VE D I + LVD + G+LE A V M
Sbjct: 171 VELDDVLI-------TALVDTYVKSGKLESARTVFETM 201
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 253/502 (50%), Gaps = 48/502 (9%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSW 319
+A + + AR+LFD P ++V WN++I AYA+ Q + LF ++ D ++
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST 375
+ + G+ R ++ + + +A++ + G + EASK+F +
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD 169
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQM---------------------PKKNSVSWNT 414
D WN MI G+ G D+ ++LF M P V+W+
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSV 229
Query: 415 ------------------MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
+++ Y++ + SA ++F ++ E ++V+ +SLITG+ + +
Sbjct: 230 HAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNH 289
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+AL + GKKPD G ++H Y+++ G D+ V +AL
Sbjct: 290 KEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSAL 349
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I MY+KCG ++ A +F I +++S+NSLI G L+G+A AF+ F ++L ++PD+
Sbjct: 350 IDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDE 409
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
+TF +L C H+GL N+G ++F+ M +F IEP EHY +V L+G G+LEEAF V
Sbjct: 410 ITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVM 469
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY-ITLSNMHAEAGRWE 695
+ ++G+ G+LL C VH+N + E A + + S Y + LSN++A GRW+
Sbjct: 470 SLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWD 529
Query: 696 EVERLRVLMRDKRAGKLPGCSW 717
EVERLR + + GKLPG SW
Sbjct: 530 EVERLRDGISESYGGKLPGISW 551
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 176/426 (41%), Gaps = 67/426 (15%)
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNF 130
+A N + AR+LFD +R++ WN++I Y LF D P DNF
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRP--DNF 107
Query: 131 SWALMITCYTRKGKLEKAREL--LELVPD-KLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
++A + ++ + R + + +V + C ++++ Y+K G +A K+F +
Sbjct: 108 TYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSI 167
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN---------------------VVSW 226
P DL +N M+ GY G ++ F M + +V+W
Sbjct: 168 PDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAW 227
Query: 227 NL------------------MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
++ +V+ + ++SA +F I P+ V+ +++ G++R G
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCG 287
Query: 269 KITEARRLFDSM-------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-DGVSWS 320
EA LF + C V A + + E I+L + D S
Sbjct: 288 NHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCS 347
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----STR 376
+I+ Y + G L A ++ +P K+I + +L+ GL G A + F ++
Sbjct: 348 ALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIP 407
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT-----MISGYAQAGQMDSAENI 431
D I +++++ C SG +++ ++F +M + + T M+ AG+++ A
Sbjct: 408 DEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEF 467
Query: 432 FQAMEE 437
++++
Sbjct: 468 VMSLQK 473
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 45/304 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++++ ++K G I +A +LF + +L WN MI GY ++ LF++M R +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH- 203
Query: 131 SWALMITCYT----RKGKLEKARELLELVPDKLESACWN-----------SVIAGYAKKG 175
CYT G ++ + L LV + + C +++ Y++
Sbjct: 204 ----QPNCYTMVALTSGLIDPS---LLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
+ A VFN + DLV+ +S++ GY++ G ALH F ++ ++V+
Sbjct: 257 CIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIV-- 314
Query: 236 SGDLSSARQLFEKIPNPNAVSWVTML--------CG-----FARHGKITEARRLFDSMPC 282
L S +L + + S+V L C +++ G + A LF +P
Sbjct: 315 ---LGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREV 338
KN+VS+N++I A + F ++ D +++S ++ G L++ +E+
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 339 YNQM 342
+ +M
Sbjct: 432 FERM 435
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/647 (26%), Positives = 304/647 (46%), Gaps = 98/647 (15%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK--- 221
N+VI+ Y SDA KVF+ M +++V++ +M++GYT +GK A+ + +M +
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 222 -------------------------------------NVVSWNLMVSGFVNSGDLSSARQ 244
+VV N +V +V +G L A
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
F++I P++ SW T++ G+ + G + EA LF MP NVVSWN +I+ + D A
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKGSPRA 222
Query: 305 VKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI-- 358
++ +++ + DG + + G L ++++ + + + +S LI
Sbjct: 223 LEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDM 282
Query: 359 --QTGRVDEASKMFNQ--LSTRDTIC-WNSMIAGFCQSGRMDEALDLFRQMPKKN----- 408
G + A+ +F+Q L+ ++ WNSM++GF + + AL L Q+ + +
Sbjct: 283 YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDS 342
Query: 409 --------------------SVSWNTMISGY--------------AQAGQMDSAENIFQA 434
V ++SGY A G + A +F
Sbjct: 343 YTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 435 MEERNIVSWNSLITGFLQ---NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
+ ++I++++ LI G ++ NSL F + L+ +G + DQ
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDA---DQFIVSNILKVCSSLASL 459
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
G Q+H +K GY ++ + AL+ MY KCG +++ +F + D++SW +I G+
Sbjct: 460 GWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGF 519
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
NG EAF+ F +M++ + P++VTF+G+LSAC H+GL + + M ++ +EP
Sbjct: 520 GQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPY 579
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
EHY C+VDLLG+ G +EA ++ M ++ + +W SLL AC HKN + A +L
Sbjct: 580 LEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLL 639
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
+ P + S Y +LSN +A G W+++ ++R + K K G SWI
Sbjct: 640 KGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSWI 685
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 192/380 (50%), Gaps = 19/380 (5%)
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+NV N +I+ Y + +A K+F ++ ++ V+W+T+++GY GK ++A E+Y +M
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 343 -PCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGR 393
++ AA + S +++ G + ++ ++ D + NS++ + ++GR
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 394 MDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
+ EA F+++ + +S SWNT+ISGY +AG MD A +F M + N+VSWN LI+GF+
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
AL+ LV M REG D +G QLH ++KSG + F
Sbjct: 218 G-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 514 NALIAMYAKCGRVESAEQVFTAIECV---DLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ALI MY+ CG + A VF + + WNS++SG+ +N A Q+
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFK-CMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
++ D T G L C + GL + +V + ++ + S LVDL +G ++
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQ 394
Query: 630 EA---FNVVRGMDVKANAGL 646
+A F+ + D+ A +GL
Sbjct: 395 DAHKLFHRLPNKDIIAFSGL 414
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 227/534 (42%), Gaps = 100/534 (18%)
Query: 45 HLGKLGKVEEA----VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
H GK+ + V I +N+ N++IS++ +SDA ++FD+MS+RN+V+
Sbjct: 14 HCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVT 73
Query: 101 WNTMIAGYLH----NSMVEEASKLFDVMPERDN-FSWALMITCYTRKGKLEKARELLELV 155
W TM++GY N +E ++ D E N F ++ ++ G ++ + E +
Sbjct: 74 WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 156 PD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ + NSV+ Y K G+ +A F + S+N++++GY + G M A+
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF---ARHGK 269
F +M + NVVSWN ++SGFV+ G + L + + CG + G
Sbjct: 194 TLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 270 ITEARRL--------FDSMP------------C------------------KNVVSWNAM 291
+T ++L +S P C +V WN+M
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 292 IAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG----KLDEAREVYNQMPCKDI 347
++ + + + + A+ L +++ D S ++G +++ L +V++ +
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 348 AAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
+ + S L+ G + +A K+F++L +D I ++ +I G +SG A LFR+
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 404 MPKKN-------------------SVSWNTMISG--------------------YAQAGQ 424
+ K S+ W I G Y + G+
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+D+ +F M ER++VSW +I GF QN +A + M G +P++ TF
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/557 (21%), Positives = 240/557 (43%), Gaps = 93/557 (16%)
Query: 47 GKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
G +G ++ + V+ +NL V NS++ ++ KNG++ +A F ++ + + SWN
Sbjct: 118 GLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWN 177
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL------ELVP 156
T+I+GY +++EA LF MP+ + SW +I+ + KG +A E L LV
Sbjct: 178 TLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVL 236
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLAL 212
D C + + G + +++ + L S ++++ Y+ G + A
Sbjct: 237 DGFALPCG---LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 213 HFF--EKMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN--------------AV 255
F EK+A +V WN M+SGF+ + + +A L +I + +
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD 315
++V + G H + + D + +V +A + I +A KLF +LP+KD
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVG------NIQDAHKLFHRLPNKD 407
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQM-----------------PCKDIAA--------- 349
+++S +I G ++ G A ++ ++ C +A+
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 350 -------------ETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
TAL+ ++ G +D +F+ + RD + W +I GF Q+GR++E
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE 527
Query: 397 ALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAME-----ERNIVSWNSLI 447
A F +M + N V++ ++S +G ++ A + + M+ E + + ++
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV 587
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
Q L+ +A + L+ + +PD++ + + + E +LK G+
Sbjct: 588 DLLGQAGLFQEANE---LINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFP 643
Query: 508 NDLFVSNALIAMYAKCG 524
+D V +L YA G
Sbjct: 644 DDPSVYTSLSNAYATLG 660
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 243/469 (51%), Gaps = 40/469 (8%)
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
Y ++G A VY +M K+ + L++G ++ G + A K+F+++ R WN+MI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 386 AGFCQSGRMDEALDLFRQM------PKK-------------NSVSWNTMISGYA------ 420
AG Q +E L LFR+M P + SVS I GY
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 421 --------------QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
+ G++ E + ++M RN+V+WN+LI G QN L +M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
G +P++ TF G Q+H +K G + + V ++LI+MY+KCG +
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL 243
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP-DQVTFIGMLSA 585
A + F+ E D + W+S+IS Y +G EA + F M + + ++V F+ +L A
Sbjct: 244 GDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH+GL ++GL+LF MVE + +P +HY+C+VDLLGR G L++A ++R M +K +
Sbjct: 304 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 363
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W +LL AC +HKN E+ + + +++P++++ Y+ L+N+HA A RW +V +R MR
Sbjct: 364 IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 423
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIRDK 754
DK K G SW E + ++ F D + + + I L ++ +++ K
Sbjct: 424 DKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLK 472
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 185/442 (41%), Gaps = 89/442 (20%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLG AV V+ KN ++ N +I+ + + G + +AR++FD+M R L +WN MIAG
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 108 YLHNSMVEEASKLFDVM------PER-------------DNFSWALMITCYTRKGKLEKA 148
+ EE LF M P+ + S I YT K LE
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE-- 123
Query: 149 RELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
L+LV + +S+ Y + G+ D E V MPV++LV++N+++ G QNG
Sbjct: 124 ---LDLVVN-------SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP 173
Query: 209 GLALHFFEKM----AEKNVVSW-----------------------------------NLM 229
L+ ++ M N +++ + +
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 233
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----N 284
+S + G L A + F + + + V W +M+ + HG+ EA LF++M + N
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 293
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----WSTIINGYIRVGKLDEAREVY 339
V++ ++ A + D+ ++LF + K G ++ +++ R G LD+A +
Sbjct: 294 EVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAII 353
Query: 340 NQMPCK-DIAAETALMSGLIQTGRVDEASKMFN---QLSTRDTICWNSMIAGFCQSGRMD 395
MP K DI L+S + A ++F Q+ D+ C+ + + R
Sbjct: 354 RSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWR 413
Query: 396 EALDLFRQMPKKN-----SVSW 412
+ ++ + M KN +SW
Sbjct: 414 DVSEVRKSMRDKNVKKEAGISW 435
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 184/402 (45%), Gaps = 57/402 (14%)
Query: 74 ISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWA 133
+S+++K G A ++ +M ++N +S N +I GY+ + A K+FD MP+R +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 134 LMITC-----YTRKGKLEKAREL--LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNL 186
MI + +G L RE+ L PD+ SV +G A S +++
Sbjct: 61 AMIAGLIQFEFNEEG-LSLFREMHGLGFSPDEY---TLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 187 MPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+K DLV +S+ Y +NGK+ M +N+V+WN ++ G +G +
Sbjct: 117 -TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 242 ARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIA 293
L++ + PN +++VT+L + + +++ V +++I+
Sbjct: 176 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
Y++ + +A K F + +D V WS++I+ Y G+ DEA E++N M A +T +
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM-----AEQTNM 290
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-- 411
++E + + +++ SG D+ L+LF M +K
Sbjct: 291 --------EINE-------------VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 412 ---WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITG 449
+ ++ +AG +D AE I ++M + +IV W +L++
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 171/418 (40%), Gaps = 83/418 (19%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
Y++ G A+ + +M +KN +S N++++G+V +GDL +AR++F+++P+ +W M+
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 262 CGFARHGKITEARRLF----------DSMPCKNVVSWNAMIAAYAQDLQID-EAVKLFIK 310
G + E LF D +V S +A + + + QI +K ++
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 311 LPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
L D V S++ + Y+R GKL + V MP +++ A L+ G Q G + ++
Sbjct: 124 L---DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 371 NQLS------------TRDTICWNSMIAG---------------------------FCQS 391
+ T + C + I G + +
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 392 GRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
G + +A F + ++ V W++MIS Y GQ D A +F M E+ + N + FL
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV--AFL 298
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
N LY + L G E + K G+ L
Sbjct: 299 -NLLYACSHSGLKDKGLE--------------------------LFDMMVEKYGFKPGLK 331
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQML 568
++ + + G ++ AE + ++ D++ W +L+S ++ A A + FK++L
Sbjct: 332 HYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 276/544 (50%), Gaps = 33/544 (6%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP--NPNAVSWVT 259
+TQ + +H FE VV + + + ++ S L A F +IP N SW T
Sbjct: 22 HTQQVHAKVIIHGFED----EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 260 MLCGFARHGKI--TEARRLFDSM--PCKNVVSWNAMIAAYA-QDLQIDEAVKLFIKLPHK 314
+L G+++ ++ L++ M C V S+N + A A L + E L L K
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMK 137
Query: 315 DGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKM 369
+G+ +++ Y ++G ++ A++V++++P ++ LM G ++ + E ++
Sbjct: 138 NGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRL 197
Query: 370 FNQLSTRDT---------ICW----NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
F + RDT IC ++ AG + G+ + + R ++ ++I
Sbjct: 198 FCLM--RDTGLALDALTLICLVKACGNVFAG--KVGKCVHGVSIRRSFIDQSDYLQASII 253
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y + +D+A +F+ +RN+V W +LI+GF + +A M RE P+Q
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T + G +H Y++++G D + I MYA+CG ++ A VF +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM 373
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
++ISW+S+I+ + +NG EA F +M S+ VVP+ VTF+ +LSACSH+G +G
Sbjct: 374 PERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
F+ M D+ + P EHY+C+VDLLGR G + EA + + M VK A WG+LL ACR+
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
HK +++ A +L +EP +S Y+ LSN++A+AG WE V +R M K K G S
Sbjct: 494 HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Query: 717 WIEV 720
EV
Sbjct: 554 ATEV 557
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 27/295 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK+GK V + + I ++ S+I ++ K + +AR+LF+ RN+V W T+I+
Sbjct: 226 GKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLIS 285
Query: 107 GYLHNSMVEEASKLF------DVMPERDNFSWALMITCYT----RKGKLEKARELLELVP 156
G+ EA LF ++P + + A++++C + R GK + +
Sbjct: 286 GFAKCERAVEAFDLFRQMLRESILPNQCTLA-AILVSCSSLGSLRHGKSVHGYMIRNGI- 343
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
++++ + S I YA+ G A VF++MP ++++S++SM+ + NG AL F
Sbjct: 344 -EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 217 KMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARH 267
KM +NV V++ ++S +SG++ + FE + P + M+ R
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 268 GKITEARRLFDSMPCKNVVS-WNAMIAAYAQDLQIDEAVKLFIKL----PHKDGV 317
G+I EA+ D+MP K + S W A+++A ++D A ++ KL P K V
Sbjct: 463 GEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 179/414 (43%), Gaps = 55/414 (13%)
Query: 49 LGKVEEAVRV----FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
LG +E + + N + K+ S++ ++A+ G + A+++FD++ RN V W +
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR------KGKLEKARELLELVPDK 158
+ GYL S E +LF +M + AL + C + GK+ K + +
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 159 LESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
++ + + S+I Y K +A K+F +++V + ++++G+ + + A F
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 217 KMAEKNVVSWNLMVSG-FVNSGDLSSARQ-------LFEKIPNPNAVSWVTMLCGFARHG 268
+M ++++ ++ V+ L S R + +AV++ + + +AR G
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIR 328
I AR +FD MP +NV+SW++MI A+ + +EA+ F K+ ++ V S
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTF----- 416
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC------WN 382
+L+S +G V E K F + TRD +
Sbjct: 417 ----------------------VSLLSACSHSGNVKEGWKQFESM-TRDYGVVPEEEHYA 453
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMDSAENIFQAM 435
M+ ++G + EA MP K S W ++S ++D A I + +
Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 156/357 (43%), Gaps = 34/357 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV------- 99
+LG +E A +VF +N V + ++ + K K + +LF M L
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 100 ----SWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
+ + AG + + + ++ ++ A +I Y + L+ AR+L E
Sbjct: 215 CLVKACGNVFAGKVGKCV--HGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETS 272
Query: 156 PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLA---------GYTQNG 206
D+ W ++I+G+AK + +A +F M + ++ LA G ++G
Sbjct: 273 VDR-NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
K + + E + V++ + + G++ AR +F+ +P N +SW +M+ F
Sbjct: 332 K-SVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 267 HGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV----- 317
+G EA F M +NV V++ ++++A + + E K F + GV
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIA-AETALMSGLIQTGRVDEASKMFNQL 373
++ +++ R G++ EA+ + MP K +A A AL+S VD A ++ +L
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 248 bits (634), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 168/587 (28%), Positives = 283/587 (48%), Gaps = 52/587 (8%)
Query: 228 LMVSGFVNSGDLSSARQLFEKI-PNPNAVSWVTMLCGFA--------------RHGKITE 272
+ S +L A+ LF PNPN + TM+ + RH +++
Sbjct: 73 IFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRH-RVSP 131
Query: 273 ARRLF-------------DSMPCKNVVS---------WNAMIAAYAQDLQIDEAVKLFIK 310
R+ F + C +VS WN+++ Y + A K+F +
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191
Query: 311 LPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA-ETALMSGLIQTGRVDEAS-- 367
+PH D S++ +I GY + G EA ++Y +M I E ++S L+ G + +
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 368 -------KMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
+ + + + I N+++ + + A F M KK+ SWNTM+ G+
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV--LMGREGKKPDQSTF 478
+ G M++A+ +F M +R++VSWNSL+ G+ + ++ L + E KPD+ T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
G +H +++ D F+S+ALI MY KCG +E A VF
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D+ W S+I+G A +G +A + F +M E V P+ VT + +L+ACSH+GL +GL +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV-RGMDVKANAGLWGSLLGACRVH 657
F M + F +P EHY LVDLL R GR+EEA ++V + M ++ + +WGS+L ACR
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGG 551
Query: 658 KNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW 717
+++E E A L +LEP Y+ LSN++A GRW ++ R M ++ K G S
Sbjct: 552 EDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSS 611
Query: 718 IEVQNQIQCFL-SDDSGRLRPETIQIILIGISADIRDKFNVFNMLSV 763
+ + F+ ++ R I+ IL + +++ K + ++L +
Sbjct: 612 VVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLDLLEI 658
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 196/402 (48%), Gaps = 54/402 (13%)
Query: 70 YNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP---- 125
+NS++ + + G A ++F +M ++ S+N MI GY EA KL+ M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 126 ERDNFS-WALMITC---------------YTRKGKLEKARELLELVPDKLESACWNSVIA 169
E D ++ +L++ C R+G + + +L N+++
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS-----------NALLD 277
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM 229
Y K + A++ F+ M KD+ S+N+M+ G+ + G M A F++M ++++VSWN +
Sbjct: 278 MYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL 337
Query: 230 VSGFVNSG-DLSSARQLF------EKIPNPNAVSWVTMLCGFARHGKITEAR---RLFDS 279
+ G+ G D + R+LF EK+ P+ V+ V+++ G A +G+++ R L
Sbjct: 338 LFGYSKKGCDQRTVRELFYEMTIVEKV-KPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 280 MPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREV 338
+ K + +A+I Y + I+ A +F KD W+++I G G +A ++
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 339 YNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFC 389
+ +M + + A+++ +G V+E +FN + + +T + S++ C
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLC 516
Query: 390 QSGRMDEALDLF-RQMPKKNSVS-WNTMISGYAQAGQMDSAE 429
++GR++EA D+ ++MP + S S W +++S +++AE
Sbjct: 517 RAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 179/406 (44%), Gaps = 70/406 (17%)
Query: 97 NLVSWNTMIAGY---------LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK 147
N+ +NTMI+ L++SM+ V P+R F + + + + + K
Sbjct: 99 NVFVYNTMISAVSSSKNECFGLYSSMIRHR-----VSPDRQTFLYLMKASSFLSEVKQIH 153
Query: 148 ARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
++ L + WNS++ Y + G F AEKVF MP D+ S+N M+ GY + G
Sbjct: 154 CHIIVSGCLS-LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 208 MGLALHFFEKMAE--------------------------KNVVSW----------NLMVS 231
AL + KM K V W NL++S
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 232 G-----FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+ + A++ F+ + + SW TM+ GF R G + A+ +FD MP +++V
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 287 SWNAMIAAYAQDLQIDEAVK-LFIKLP-----HKDGVSWSTIINGYIRVGKLDEAREVYN 340
SWN+++ Y++ V+ LF ++ D V+ ++I+G G+L R V+
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 341 QMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
+ + + L S LI + G ++ A +F + +D W SMI G G +
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 397 ALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
AL LF +M ++ N+V+ +++ + +G ++ ++F M+++
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 152/307 (49%), Gaps = 32/307 (10%)
Query: 44 IHLGK--LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
I LGK G +E V+S+ NL+ N+++ ++ K + A++ FD M ++++ SW
Sbjct: 248 IRLGKGVHGWIERRGPVYSS----NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSW 303
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA-RELL-------E 153
NTM+ G++ +E A +FD MP+RD SW ++ Y++KG ++ REL +
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNL---MPVK-DLVSYNSMLAGYTQNGKMG 209
+ PD++ S+I+G A G+ S V L + +K D ++++ Y + G +
Sbjct: 364 VKPDRVTMV---SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFA 265
A F+ EK+V W M++G G+ A QLF ++ PN V+ + +L +
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 266 RHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLF-IKLPHKDGVS- 318
G + E +F+ M K + +++ + +++EA + K+P + S
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 319 WSTIING 325
W +I++
Sbjct: 541 WGSILSA 547
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 150/338 (44%), Gaps = 51/338 (15%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG-KISDARQLFDKMS---- 94
N ++ +LG +E A VF ++LV++NS++ ++K G R+LF +M+
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 95 -QRNLVSWNTMIAGYLHNSMVEEA----SKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
+ + V+ ++I+G +N + + + + D F + +I Y + G +E+A
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Query: 150 ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN-SMLAGYTQNGKM 208
+ + +K + A W S+I G A G A ++F M + + N ++LA T
Sbjct: 424 MVFKTATEK-DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHS 482
Query: 209 GL---ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFA 265
GL LH F M +K GF +P + +++
Sbjct: 483 GLVEEGLHVFNHMKDK---------FGF-----------------DPETEHYGSLVDLLC 516
Query: 266 RHGKITEARRLFD-SMPCKNVVS-WNAMIAAY--AQDLQIDE-AVKLFIKL-PHKDGVSW 319
R G++ EA+ + MP + S W ++++A +D++ E A+ +KL P K+G +
Sbjct: 517 RAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG-GY 575
Query: 320 STIINGYIRVGKL---DEAREVYNQMPCKDIAAETALM 354
+ N Y VG+ D+ RE K A ++++
Sbjct: 576 VLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV 613
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/637 (26%), Positives = 296/637 (46%), Gaps = 63/637 (9%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------ 218
NS + G A +VF+ MP D+VS+ S++ Y AL F M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 219 --AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITE 272
+ +V+S L G S +++ L + +S V ++L + R GKI +
Sbjct: 104 VSPDTSVLSVVLKACG--QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDK 161
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIR 328
+ R+F MP +N V+W A+I + E + F ++ D +++ +
Sbjct: 162 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 329 VGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+ ++ + ++ + + + +L + + G + + +F +S RD + W S+
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 385 IAGFCQSGRMDEALDLFRQM------PKKNSVS-------------W------------- 412
I + + G+ +A++ F +M P + + + W
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 413 -------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
N+M+ Y+ G + SA +FQ M R+I+SW+++I G+ Q + K
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M + G KP + G Q+H L G + V ++LI MY+KCG
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
++ A +F + D++S ++I+GYA +G + EA F++ L PD VTFI +L+A
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
C+H+G + G F M E + + P EHY C+VDLL R GRL +A ++ M K +
Sbjct: 522 CTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV 581
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W +LL AC+ ++E G AA R+ EL+P A+ +TL+N+++ G EE +R M+
Sbjct: 582 VWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMK 641
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
K K PG S I++++ + F+S D R P++ I
Sbjct: 642 AKGVIKEPGWSSIKIKDCVSAFVSGD--RFHPQSEDI 676
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 202/521 (38%), Gaps = 141/521 (27%)
Query: 52 VEEAVRVFSNTIHKNLVTY--NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
VEE + SN + +V + NS + G + ARQ+FDKM ++VSW ++I Y+
Sbjct: 26 VEENIVRISNQV---MVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYV 82
Query: 110 HNSMVEEASKLFDVM--------PERDNFSWAL--------------------------- 134
+ +EA LF M P+ S L
Sbjct: 83 TANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSS 142
Query: 135 ------MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP 188
++ Y R GK++K+ + +P + + W ++I G G++ + F+ M
Sbjct: 143 VYVGSSLLDMYKRVGKIDKSCRVFSEMPFR-NAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 189 ---------------------------------------VKDLVSYNSMLAGYTQNGKMG 209
V L NS+ YT+ G+M
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ 261
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG-- 263
L FE M+E++VVSW ++ + G A + F K+ N PN ++ +M
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 264 ---------------------------------FARHGKITEARRLFDSMPCKNVVSWNA 290
++ G + A LF M C++++SW+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 291 MIAAYAQDLQIDEAVKLFIKL------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
+I Y Q +E K F + P ++ ++G + V ++ R+V+ C
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV--IEGGRQVHALALC 439
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+ + + S LI + G + EAS +F + D + +MI G+ + G+ EA+DL
Sbjct: 440 FGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDL 499
Query: 401 FRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
F + K +SV++ ++++ +GQ+D + F M+E
Sbjct: 500 FEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQE 540
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 20/313 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V S ++ +L NSM+ +++ G + A LF M R+++SW+T+I GY EE
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLEL-VPDKLE--SACWNSVIAG 170
K F M + +F+ A +++ +E R++ L + LE S +S+I
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSW 226
Y+K G +A +F D+VS +M+ GY ++GK A+ FEK + + V++
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+++ +SG L F + P + M+ R G++++A ++ + M
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Query: 282 -CKNVVSWNAMIAAYAQDLQID---EAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEARE 337
K+ V W ++ A I+ A + ++L + T+ N Y G L+EA
Sbjct: 576 WKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAAN 635
Query: 338 VYNQMPCKDIAAE 350
V M K + E
Sbjct: 636 VRKNMKAKGVIKE 648
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G ++EA +F T ++V+ +MI+ +A++GK +A LF+K + V++ +
Sbjct: 458 KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPDK 158
++ H+ ++ F++M E N + M+ R G+L A +++ + K
Sbjct: 518 VLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Query: 159 LESACWNSVIAGYAKKGQFSD----AEKVFNLMPV--KDLVSYNSMLAGYTQNGKMGLAL 212
+ W +++ KG AE++ L P LV+ ++ Y+ G + A
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI---YSSTGNLEEAA 634
Query: 213 HFFEKMAEKNVV---SWNLM-----VSGFVNSGD 238
+ + M K V+ W+ + VS FV SGD
Sbjct: 635 NVRKNMKAKGVIKEPGWSSIKIKDCVSAFV-SGD 667
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 276/541 (51%), Gaps = 50/541 (9%)
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK 314
V W ++L +A+ GK+ +A +LFD MP ++V+S N + + ++ + + L ++
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 315 DGVSWSTI--------------------------------------INGYIRVGKLDEAR 336
G +T+ I Y + G R
Sbjct: 151 GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN----QLSTRDTICWNSMIAGFCQSG 392
V++ M +++ TA++SGLI+ ++ ++F+ L +++ + S +A S
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 393 RMDEALDLFRQMPKKNSVSW----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
R+ E + + K S + ++ Y++ G ++ A IF++ E + VS ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
G QN +A++ + M + G + D + +G QLH ++K +
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
+ FV+N LI MY+KCG + ++ VF + + +SWNS+I+ +A +G+ + A K +++M
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ EV P VTF+ +L ACSH GL ++G +L M E IEP EHY+C++D+LGR G L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMH 688
+EA + + + +K + +W +LLGAC H + E+GE+AA +L + P ++S +I ++N++
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIY 570
Query: 689 AEAGRWEEVERLRVLMRDKRAG--KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIG 746
+ G+W+ ER + + R K G K G S IE++++ F+ +D + E I +L G
Sbjct: 571 SSRGKWK--ERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSG 628
Query: 747 I 747
+
Sbjct: 629 L 629
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 190/397 (47%), Gaps = 56/397 (14%)
Query: 63 IHKN-LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
IH+N LV +NS++S++AK GK+ DA +LFD+M R+++S N + G+L N E L
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 122 DVMPERDNFSWA----LMITCYTRKGKL-EKARELLELVP--DKLESACWNSVIAGYAKK 174
M F A ++ C T + L K L ++ DK E + N +I Y K
Sbjct: 145 KRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDK-EISVGNKLITSYFKC 203
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
G VF+ M +++++ ++++G +N ++ E + ++LM G V
Sbjct: 204 GCSVSGRGVFDGMSHRNVITLTAVISGLIEN-----------ELHEDGLRLFSLMRRGLV 252
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL--------FDSMPCKNVV 286
+PN+V++++ L + +I E +++ +S C
Sbjct: 253 ----------------HPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE-- 294
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
+A++ Y++ I++A +F D VS + I+ G + G +EA + + +M
Sbjct: 295 --SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTR--------DTICWNSMIAGFCQSGRMDEAL 398
+ + ++S ++ +D + + QL + +T N +I + + G + ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+FR+MPK+N VSWN+MI+ +A+ G +A +++ M
Sbjct: 413 TVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 151/375 (40%), Gaps = 72/375 (19%)
Query: 19 MTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFA 78
+T M H L I S K + N+ I K G VF H+N++T ++IS
Sbjct: 173 VTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLI 232
Query: 79 KNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITC 138
+N D +LF M +R LV N++ YL S+ + W
Sbjct: 233 ENELHEDGLRLFSLM-RRGLVHPNSVT--YLSALAACSGSQRIVEGQQIHALLWK----- 284
Query: 139 YTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
Y + +L L+++ Y+K G DA +F D VS +
Sbjct: 285 YGIESELCIESALMDM----------------YSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 199 LAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVS--------------------- 231
L G QNG A+ FF +M + NVVS L VS
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 232 ---GFVNS---------GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
FVN+ GDL+ ++ +F ++P N VSW +M+ FARHG A +L++
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 280 MPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----WSTIINGYIRVG 330
M V V++ +++ A + ID+ +L ++ G+ ++ II+ R G
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 331 KLDEAREVYNQMPCK 345
L EA+ + +P K
Sbjct: 509 LLKEAKSFIDSLPLK 523
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L I + F N I K G + ++ VF +N V++NSMI+ FA++G
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439
Query: 84 SDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WAL 134
A +L+++M+ + V++ +++ H ++++ +L + M E +
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC 499
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIA-----GYAKKGQFSDAEKVFNLMPV 189
+I R G L++A+ ++ +P K + W +++ G + G+++ AE++F P
Sbjct: 500 IIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYA-AEQLFQTAP- 557
Query: 190 KDLVSYNSMLAG-YTQNGK 207
D S + ++A Y+ GK
Sbjct: 558 -DSSSAHILIANIYSSRGK 575
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 246 bits (627), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/511 (29%), Positives = 258/511 (50%), Gaps = 41/511 (8%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ------DLQIDE 303
P N + V CG A H A ++FD MP ++ ++W +++ A Q L +
Sbjct: 39 PLANTLVNVYGKCGAASH-----ALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFS 93
Query: 304 AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
+V L D V +S ++ +G +D R+V+ C I +E A
Sbjct: 94 SVGSSSGLRPDDFV-FSALVKACANLGSIDHGRQVH----CHFIVSEYA----------- 137
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
D + +S++ + + G ++ A +F + KN++SW M+SGYA++G
Sbjct: 138 ------------NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP-DQSTFXXXX 482
+ + A +F+ + +N+ SW +LI+GF+Q+ +A M RE D
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
G Q+H ++ G+ + +F+SNALI MYAKC V +A+ +F+ + D++
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SW SLI G A +G A +A + M+S V P++VTF+G++ ACSH G +G +LF+ M
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
+D+ I P +HY+CL+DLLGR G L+EA N++ M + W +LL AC+ ++
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 663 G-EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
G A +S + + S YI LSN++A A W +V R + + K PG S +EV+
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 722 NQIQCFLSDDSGRLRPETIQIILIGISADIR 752
+ + F + ++ E I +L + ++R
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 186/391 (47%), Gaps = 47/391 (12%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI-----AGYLHNSMVEEASKLFDVMP 125
N++++V+ K G S A Q+FD+M R+ ++W +++ A ++ +S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 126 ERDNFSWALMITCYTRKGKLEKARELL------ELVPDKLESACWNSVIAGYAKKGQFSD 179
D+F ++ ++ G ++ R++ E D++ + S++ YAK G +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS---SLVDMYAKCGLLNS 158
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A+ VF+ + VK+ +S+ +M++GY ++G+ AL F + KN+ SW ++SGFV SG
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 240 SSARQLFEK-------IPNPNAVSWVTMLC--------GFARHGKITEARRLFDSMPCKN 284
A +F + I +P +S + C G HG + FDS
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG--FDSC---- 272
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
V NA+I YA+ + A +F ++ H+D VSW+++I G + G+ ++A +Y+ M
Sbjct: 273 VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS 332
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFC------QSGRM 394
+ GLI G V++ ++F + T+D S+ C +SG +
Sbjct: 333 HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM-TKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 395 DEALDLFRQMP-KKNSVSWNTMISGYAQAGQ 424
DEA +L MP + +W ++S + G+
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 192/436 (44%), Gaps = 68/436 (15%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N+++ Y K G S A +VF+ MP +D +++ S+L Q G L F + + +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 225 S-----WNLMVSGFVNSGDLSSARQ-----LFEKIPNPNAV--SWVTMLCGFARHGKITE 272
++ +V N G + RQ + + N V S V M +A+ G +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDM---YAKCGLLNS 158
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKL 332
A+ +FDS+ KN +SW AM++ YA+ + +EA++LF LP K+ SW+ +I+G+++ GK
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 333 DEAREVYNQM------------------PCKDIAAETA--LMSGLI-------------- 358
EA V+ +M C ++AA A + GL+
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 278
Query: 359 ------QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKN 408
+ V A +F+++ RD + W S+I G Q G+ ++AL L+ M K N
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLV 464
V++ +I + G ++ +FQ+M + R + + + L S D ++L+
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC- 523
PD+ T+ Q+G ++ ++++ S + D L +YA
Sbjct: 399 --HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASAS 456
Query: 524 --GRVESAEQVFTAIE 537
G+V A + +E
Sbjct: 457 LWGKVSEARRKLGEME 472
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 56/331 (16%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
V +S++ ++AK G ++ A+ +FD + +N +SW M++GY + EEA +LF ++P +
Sbjct: 141 VVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 128 DNFSWALMITCYTRKGK--------LEKARELLE----LVPDKLESACWN--SVIAG--- 170
+ +SW +I+ + + GK E RE ++ LV + AC N + IAG
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 171 ----------------------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
YAK A+ +F+ M +D+VS+ S++ G Q+G+
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 209 GLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVT 259
AL ++ M + N V++ ++ + G + R+LF+ + P+ +
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 260 MLCGFARHGKITEARRLFDSMP-CKNVVSWNAMIAAYAQ----DLQIDEAVKLFIKLPHK 314
+L R G + EA L +MP + +W A+++A + + I A L K
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK 440
Query: 315 DGVSWSTIINGYIRV---GKLDEAREVYNQM 342
D ++ + N Y GK+ EAR +M
Sbjct: 441 DPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 165/382 (43%), Gaps = 74/382 (19%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVF----------------------------- 77
GK G A++VF H++ + + S+++
Sbjct: 49 GKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVF 108
Query: 78 -------AKNGKISDARQ-----LFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
A G I RQ + + + +V ++++ Y ++ A +FD +
Sbjct: 109 SALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN 185
++ SW M++ Y + G+ E+A EL ++P K W ++I+G+ + G+ +A VF
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVK-NLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 186 LM-----PVKDLVSYNSM----------LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
M + D + +S+ +AG +G + +AL F + V N ++
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG-LVIALGF-----DSCVFISNALI 280
Query: 231 SGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----V 286
+ D+ +A+ +F ++ + + VSW +++ G A+HG+ +A L+D M V V
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQ 341
++ +I A + +++ +LF + G+ ++ +++ R G LDEA + +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 342 MP-CKDIAAETALMSGLIQTGR 362
MP D AL+S + GR
Sbjct: 401 MPFPPDEPTWAALLSACKRQGR 422
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L I VF N I K V A +FS H+++V++ S+I A++G+
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 84 SDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALM-ITC 138
A L+D M + N V++ +I H VE+ +LF M + +L TC
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 139 YT----RKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
R G L++A L+ +P + W ++++ ++G+
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 281/561 (50%), Gaps = 41/561 (7%)
Query: 224 VSWNLMVSGFVNSG----DLSSARQLFEKIPNPNAVSWVTML--CG------FAR--HGK 269
+ WN++++ + + +++ +++ K P+A ++ ++L CG F R HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRV 329
I + C NA+I+ Y + + A +LF ++ +D VSW+ +IN Y
Sbjct: 170 IEVSSYKSSLYVC------NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 330 GKLDEAREVYNQMPCKDIAAETA----LMSGLIQTGRVDEA----SKMFNQLSTRDTICW 381
G EA E++++M + + G +QTG A S+M N ++ D +
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV-- 281
Query: 382 NSMIAGF--------CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
+MI G + G+ L + ++V NT+I+ Y++ + A +F+
Sbjct: 282 -AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFR 339
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
EE ++ +WNS+I+G+ Q + +A L M G +P+ T Q
Sbjct: 340 QTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQH 399
Query: 494 GNQLHEYILKSGYINDL-FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
G + H YIL+ D + N+L+ +YAK G++ +A+QV + D +++ SLI GY
Sbjct: 400 GKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYG 459
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
G A FK+M + PD VT + +LSACSH+ L ++G LF M ++ I P
Sbjct: 460 NQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
+H+SC+VDL GR G L +A +++ M K + W +LL AC +H N +IG++AA +L E
Sbjct: 520 QHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDS 732
++P N Y+ ++NM+A AG W ++ +R +MRD K PGC+WI+ + F D+
Sbjct: 580 MKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDT 639
Query: 733 GRLRPETIQIILIGISADIRD 753
+L G++ ++D
Sbjct: 640 SSPEACNTYPLLDGLNQLMKD 660
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 46/280 (16%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
N++I++++K + A +F + + +L +WN++I+GY + EEAS L M +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 127 RDNFSWALMITCYTRKGKLEKARE----LLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
++ + A ++ R L+ +E +L K + WNS++ YAK G+ A++
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
V +LM +D V+Y S++ GY G+ G+AL F++M +
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI------------------- 479
Query: 243 RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV-----SWNAMIAAYAQ 297
P+ V+ V +L + + E RLF M C+ + ++ M+ Y +
Sbjct: 480 --------KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 298 DLQIDEAVKLFIKLPHK-DGVSWSTIIN-----GYIRVGK 331
+ +A + +P+K G +W+T++N G ++GK
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 190/455 (41%), Gaps = 55/455 (12%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
L V+ S+ + + V +++ ++ ++A+ + + + + WN +IA Y
Sbjct: 60 LAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASY 119
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVI 168
N + EE + M + + +T L+ E L++ + V+
Sbjct: 120 AKNELFEEVIAAYKRMVSK-----GIRPDAFTYPSVLKACGETLDVA--------FGRVV 166
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
G + + + L N++++ Y + MG+A F++M E++ VSWN
Sbjct: 167 HGSIEVSSYKSS-----------LYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 229 MVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSM---- 280
+++ + + G S A +LF+K+ + ++W + G + G A L M
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFP 275
Query: 281 ----PCKNVVSWNA--MIAAYAQDLQIDEAVKLFIKLPHKDGVS--WSTIINGYIRVGKL 332
P ++ A +I A +++ + + DG+ +T+I Y + L
Sbjct: 276 TSLDPVAMIIGLKACSLIGA----IRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDL 331
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF----------NQLSTRDTICWN 382
A V+ Q + +++SG Q + +EAS + N ++ +
Sbjct: 332 RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
+ IA Q G+ L R+ K ++ WN+++ YA++G++ +A+ + M +R+ V+
Sbjct: 392 ARIANL-QHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVT 450
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
+ SLI G+ AL M R G KPD T
Sbjct: 451 YTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+SV +++ Y+ + A++I + + + + WN LI + +N L+ + + + M
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
+G +PD T+ G +H I S Y + L+V NALI+MY + +
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
A ++F + D +SWN++I+ YA G EAF+ F +M V +T+ + C
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 588 HAG 590
G
Sbjct: 257 QTG 259
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K GK+ A +V ++ VTY S+I + G+ A LF +M++ + + +
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVV 487
Query: 107 GYL----HNSMVEEASKLF-------DVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
L H+ +V E +LF + P +FS M+ Y R G L KA++++ +
Sbjct: 488 AVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFS--CMVDLYGRAGFLAKAKDIIHNM 545
Query: 156 PDKLESACWNSV-----IAGYAKKGQFSDAEKVFNLMP 188
P K A W ++ I G + G+++ AEK+ + P
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIGKWA-AEKLLEMKP 582
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 247/461 (53%), Gaps = 16/461 (3%)
Query: 301 IDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
I A K+F ++P D +S + +I +++ + EA + + ++ C I +I +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 361 GRVDEASKMFNQLS--------TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
K+ QL + ++++ + + + +A F N VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
+ISGY + + + A ++F+AM ER++V+WN++I GF Q +A+ + V M REG
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 473 -PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVESAE 530
P++STF G +H +K G ++FV N+LI+ Y+KCG +E +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 531 QVFTAIE--CVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACS 587
F +E +++SWNS+I GYA NG EA F++M+ + + P+ VT +G+L AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAE--HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
HAGL +G F V D+ L E HY+C+VD+L R GR +EA +++ M + G
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
W +LLG C++H N + + AA ++ EL+P + S+Y+ LSN ++ W+ V +R M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 706 DKRAGKLPGCSWIEVQNQIQCFL-SDDSGRLRPETIQIILI 745
+ + GCSWIEV++QI+ F+ +D + L+ E +++ +
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLAL 503
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 31/308 (10%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KL + +A R F +T N+V+ ++IS + K + +A LF M +R++V+WN +I G
Sbjct: 140 KLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGG 199
Query: 108 YLHNSMVEEASKLF-------DVMPERDNFSWALMITCYTRKGKLEKAREL----LELVP 156
+ EEA F V+P F A IT + + + ++ +
Sbjct: 200 FSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA--ITAISNIASHGAGKSIHACAIKFLG 257
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEKVFNLM--PVKDLVSYNSMLAGYTQNGKMGLALHF 214
+ WNS+I+ Y+K G D+ FN + +++VS+NSM+ GY NG+ A+
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 215 FEKMA-EKNVVSWNLMVSGFV----NSGDLSSARQLFEKIPN----PNAVS---WVTMLC 262
FEKM + N+ N+ + G + ++G + F K N PN + + M+
Sbjct: 318 FEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVD 377
Query: 263 GFARHGKITEARRLFDSMPCKNVVS-WNAMIAA---YAQDLQIDEAVKLFIKLPHKDGVS 318
+R G+ EA L SMP + W A++ ++ A ++L +D S
Sbjct: 378 MLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSS 437
Query: 319 WSTIINGY 326
+ + N Y
Sbjct: 438 YVMLSNAY 445
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 44/374 (11%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMI 136
I +A ++FD++ + +++S +I ++ S EAS+ F + P F +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 137 TCYTRKGKLEKARELLELVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
+ +R KL K L L S + ++V+ Y K +DA + F+ ++VS
Sbjct: 103 STTSRDVKLGKQLHCYAL-KMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-----EKI 249
++++GY + + AL F M E++VV+WN ++ GF +G A F E +
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 250 PNPNAVSW---VTMLCGFARHGKITEARRLFDSMPCK------NVVSWNAMIAAYAQDLQ 300
PN ++ +T + A HG A + + K NV WN++I+ Y++
Sbjct: 222 VIPNESTFPCAITAISNIASHG----AGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 301 IDEAVKLFIKL--PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TAL- 353
+++++ F KL ++ VSW+++I GY G+ +EA ++ +M KD T L
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPNNVTILG 336
Query: 354 ------MSGLIQTGRV--DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+GLIQ G + ++A ++ + + + M+ +SGR EA +L + MP
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 396
Query: 406 KKNSVS-WNTMISG 418
+ W ++ G
Sbjct: 397 LDPGIGFWKALLGG 410
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 279/569 (49%), Gaps = 34/569 (5%)
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
+L+ L+ YN ML L F ++ + + N + + S + R+
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKS--IGRLRK 61
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
+ E G HG +A FDS VS N+++ YA +I+
Sbjct: 62 VIE---------------GEKVHGYAVKAGLEFDSY-----VS-NSLMGMYASLGKIEIT 100
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQ 359
K+F ++P +D VSW+ +I+ Y+ G+ ++A V+ +M + D + +S
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 360 TGRVDEASKMFNQLSTR---DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
++ +++ + T N+++ FC+ G +D+A +F M KN W +M+
Sbjct: 161 LKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
GY G++D A +F+ +++V W +++ G++Q + + +AL+ M G +PD
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ G +H YI ++ D V AL+ MYAKCG +E+A +VF I
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+ D SW SLI G A+NG + A + +M + V D +TF+ +L+AC+H G +G
Sbjct: 341 KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGR 400
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV---RGMDVKANAGLWGSLLGA 653
+F M E ++P +EH SCL+DLL R G L+EA ++ RG + ++ SLL A
Sbjct: 401 KIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSA 460
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
R + N++I E A +L ++E ++S + L++++A A RWE+V +R M+D K P
Sbjct: 461 ARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFP 520
Query: 714 GCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
GCS IE+ F+ D P+ +I
Sbjct: 521 GCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 202/434 (46%), Gaps = 46/434 (10%)
Query: 46 LGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
+G+L KV E +V + L NS++ ++A GKI ++FD+M QR++VSW
Sbjct: 56 IGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSW 115
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSW------ALMITCYTRKGKLEKARELLELV 155
N +I+ Y+ N E+A +F M + N + + + C K LE + V
Sbjct: 116 NGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK-NLEIGERIYRFV 174
Query: 156 PDKLESAC--WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ E + N+++ + K G A VF+ M K++ + SM+ GY G++ A
Sbjct: 175 VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARV 234
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFAR--- 266
FE+ K+VV W M++G+V A +LF + P+ V++L G A+
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 267 -------HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW 319
HG I E R D V A++ YA+ I+ A+++F ++ +D SW
Sbjct: 295 LEQGKWIHGYINENRVTVDK------VVGTALVDMYAKCGCIETALEVFYEIKERDTASW 348
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST 375
+++I G G A ++Y +M + + A+++ G V E K+F+ ++
Sbjct: 349 TSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 376 RDTICWNS-----MIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMD 426
R + S +I C++G +DEA +L +M ++ + + +++S G +
Sbjct: 409 RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVK 468
Query: 427 SAENIFQAMEERNI 440
AE + + +E+ +
Sbjct: 469 IAERVAEKLEKVEV 482
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 153/355 (43%), Gaps = 50/355 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ +F K G + AR +FD M +N+ W +M+ GY+ ++EA LF+ P +D
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 131 SWALMITCYTRKGKLEKARELLELV------PDKLESACWNSVIAGYAKKGQFSDAEKVF 184
W M+ Y + + ++A EL + PD S++ G A+ G + +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF---VLVSLLTGCAQTGALEQGKWIH 302
Query: 185 NLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
+ D V +++ Y + G + AL F ++ E++ SW ++ G +G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 241 SARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
A L+ ++ N +A+++V +L G + E R++F SM ++ V
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQ--------- 413
Query: 297 QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD----IAAETA 352
P + S +I+ R G LDEA E+ ++M + + +
Sbjct: 414 ---------------PKSE--HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCS 456
Query: 353 LMSGLIQTGRVDEASKMFNQL---STRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
L+S G V A ++ +L D+ + + + + R ++ ++ R+M
Sbjct: 457 LLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKM 511
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 245/487 (50%), Gaps = 48/487 (9%)
Query: 303 EAVKLF----IKLPHKDGVS-WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
EA +LF I+ K GVS + ++ IR+ + + VY M E +M+ +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 358 ----IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM--------- 404
++ G + +A ++F+++ R+ + S+I+GF G EA +LF+ M
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 405 -------------------------PKKNSVSWNTMISG-----YAQAGQMDSAENIFQA 434
K V NT +S Y++ G ++ A F+
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG 494
M E+ V+WN++I G+ + +AL L M G DQ T ++
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
Q H ++++G+ +++ + AL+ Y+K GRV++A VF + ++ISWN+L+ GYA +
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G +A K F++M++ V P+ VTF+ +LSAC+++GL+ QG ++F M E I+P A H
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELE 674
Y+C+++LLGR G L+EA +R +K +W +LL ACR+ +NLE+G A +L +
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGR 734
P NY+ + NM+ G+ E + + K +P C+W+EV +Q FLS D
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFD 584
Query: 735 LRPETIQ 741
ET++
Sbjct: 585 SYNETVK 591
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 59/345 (17%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ SN N ++ + K G I DAR+LFD++ +RNL S+ ++I+G+++ EA
Sbjct: 149 MMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEA 208
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKAREL----LEL-VPDKLESACWNSVI 168
+LF +M E + ++A+M+ G + ++L L+L V D +C +I
Sbjct: 209 FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSC--GLI 266
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG---------------------- 206
Y+K G DA F MP K V++N+++AGY +G
Sbjct: 267 DMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 207 KMGLALHFFEKMA-----------------EKNVVSWNLMVSGFVNSGDLSSARQLFEKI 249
+ + + K+A E +V+ +V + G + +AR +F+K+
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKL 386
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAV 305
P N +SW ++ G+A HG+ T+A +LF+ M NV V++ A+++A A ++
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 306 KLFIKLPHKDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCK 345
++F+ + G+ ++ +I R G LDEA + P K
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 16 KIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMIS 75
K+++T H I + + + K G+V+ A VF KN++++N+++
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 76 VFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
+A +G+ +DA +LF+KM N+ V++ +++ ++ + E+ ++F M E
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 132 -----WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS----DAEK 182
+A MI R G L++A + P K W +++ + AEK
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
++ + P K L +Y M Y GK A E + K +
Sbjct: 520 LYGMGPEK-LGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 207/353 (58%), Gaps = 12/353 (3%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS------LYFDALK 461
+S+ T++ Y+ A +F + +R+ VSWN L + +L+N + FD +K
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 462 SLVLMGREG-KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
+ V +G KPD T G Q+H++I ++G L +SN L++MY
Sbjct: 207 NDV----DGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
++CG ++ A QVF + +++SW +LISG A+NG+ EA +AF +ML + P++ T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 581 GMLSACSHAGLANQGLDLFKCMVE-DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
G+LSACSH+GL +G+ F M +F I+P HY C+VDLLGR L++A+++++ M+
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+K ++ +W +LLGACRVH ++E+GE L EL+ A +Y+ L N ++ G+WE+V
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
LR LM++KR PGCS IE+Q + F+ DD R E I +L I+ ++
Sbjct: 443 LRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 160/349 (45%), Gaps = 32/349 (9%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
LG ++ ++FS+ + + +++ +++ +DA ++FD++ +R+ VSWN + + Y
Sbjct: 130 LGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCY 189
Query: 109 LHNSMVEEASKLFDVMP-------ERDNFSWALMITCYTRKGKLEKARELLELVPDKLES 161
L N + LFD M + D + L + G L+ +++ + + + S
Sbjct: 190 LRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 162 ACW---NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
N++++ Y++ G A +VF M +++VS+ ++++G NG A+ F +M
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 219 AEKNVVSWNLMVSGFV----NSGDLSSARQLFEKI--------PNPNAVSWVTMLCGFAR 266
+ + ++G + +SG ++ F+++ PN + V L G AR
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKLPHKDGVSWSTI 322
+ +A L SM K + W ++ A D+++ E V I+L ++ + +
Sbjct: 370 --LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETAL----MSGLIQTGRVDEAS 367
+N Y VGK ++ E+ + M K I + + G + VD+ S
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 53/307 (17%)
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF-----VNS 236
+VF+ L N+M+ ++ + F + + + N + S F + S
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 237 GDLSSARQLFEKIPNPNAVS----WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
GDL Q+ KI + +S T++ ++ T+A ++FD +P ++ VSWN +
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 293 AAYAQDLQIDEAVKLFIKLPH-------KDGVSWSTIINGYIRVGKLDEAREVYNQMPCK 345
+ Y ++ + + + LF K+ + DGV+ + +G LD ++V+
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH------ 240
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
D E L L LS N++++ + + G MD+A +F M
Sbjct: 241 DFIDENGLSGAL--------------NLS-------NTLVSMYSRCGSMDKAYQVFYGMR 279
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL----------QNSL 455
++N VSW +ISG A G A F M + I +TG L + +
Sbjct: 280 ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMM 339
Query: 456 YFDALKS 462
+FD ++S
Sbjct: 340 FFDRMRS 346
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 72/287 (25%)
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
D++ + ++F + NP TM+ F+ E RLF S+ + + N + +++A
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA- 119
Query: 298 DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
+ I+ G L +++ ++ +++ LM+ L
Sbjct: 120 -------------------------LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 358 IQTGRVDE----ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-------K 406
+ E A K+F+++ RDT+ WN + + + ++ R + L LF +M K
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 407 KNSVSW-----------------------------------NTMISGYAQAGQMDSAENI 431
+ V+ NT++S Y++ G MD A +
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
F M ERN+VSW +LI+G N +A+++ M + G P++ T
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL 321
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 139/343 (40%), Gaps = 70/343 (20%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA----- 106
+ + RVFS ++ L N+MI F+ + + +LF + + + + N + +
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 107 ---------------------GYLHNSMV--------------EEASKLFDVMPERDNFS 131
G+L +S++ +A K+FD +P+RD S
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLESACWNSV----------IAGYAKKGQFSDAE 181
W ++ +CY R ++ R++L L DK+++ V + A G +
Sbjct: 182 WNVLFSCYLRN---KRTRDVLVLF-DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGK 237
Query: 182 KVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
+V + + L N++++ Y++ G M A F M E+NVVSW ++SG +G
Sbjct: 238 QVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNG 297
Query: 238 DLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPC------KNVVS 287
A + F ++ +P + +L + G + E FD M N+
Sbjct: 298 FGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHH 357
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLPHK-DGVSWSTIINGYIRV 329
+ ++ + +D+A L + K D W T++ G RV
Sbjct: 358 YGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLL-GACRV 399
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H I G+++D + L+ +Y+ C A +VF I D +SWN L S Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 554 NGYAIEAFKAFKQMLSEE---VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
N + F +M ++ V PD VT + L AC++ G + G + +++ +
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD-FIDENGLSG 250
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ LV + R G +++A+ V GM + N W +L+
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRER-NVVSWTALISG 292
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/564 (28%), Positives = 285/564 (50%), Gaps = 36/564 (6%)
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+S + +V + GD+ ARQ+F+ + + V+W +++ +H + EA ++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 284 NVV----SWNAMIAAYA-----QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDE 334
NV+ + +++ A++ ++ Q + + + L + S +++ Y++ GK E
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF----------NQLSTRDTI--CWN 382
A+ V +++ KD+ TAL+ G Q G EA K F N+ + + C N
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
G +G++ L + + + S ++++ Y + +D + +F+ +E N VS
Sbjct: 280 LKDIG---NGKLIHGL-MVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
W SLI+G +QN AL M R+ KP+ T + G Q+H +
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
K G+ D + + LI +Y KCG + A VF + VD+IS N++I YA NG+ EA
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F++M++ + P+ VT + +L AC+++ L +G +LF +D I +HY+C+VDLL
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLL 514
Query: 623 GRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYI 682
GR GRLEEA ++ + + LW +LL AC+VH+ +E+ E ++ E+EP + I
Sbjct: 515 GRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
Query: 683 TLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
+SN++A G+W V ++ M+D + K P SW+E+ + F++ D P + QI
Sbjct: 574 LMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFS-HPNSEQI 632
Query: 743 I-----LIGISAD---IRDKFNVF 758
+ LI S D + DK VF
Sbjct: 633 LENLEELIKKSKDLGYVEDKSCVF 656
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 178/363 (49%), Gaps = 28/363 (7%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------ 121
++ + ++ K G I ARQ+FD MS+R++V+WN++IA + + +EA +++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 122 DVMPERDNFSWALMITCYTR---KGKLEKARELLELVPDKLESACWNSVIAG-YAKKGQF 177
+V+P D ++ + + ++ + + +++ L ++ ++ + S + Y K G+
Sbjct: 160 NVLP--DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFVNS 236
+A+ V + + KD+V +++ GY+Q G+ A+ F+ M EK + S ++
Sbjct: 218 REAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISC 277
Query: 237 GDLSS------ARQLFEKIPNPNAV-SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
G+L L K +A+ S ++L + R + ++ R+F + N VSW
Sbjct: 278 GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWT 337
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMPCK 345
++I+ Q+ + + A+ F K+ + + S+ + G + +E R+++ +
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY 397
Query: 346 DIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ SGLI + G D A +F+ LS D I N+MI + Q+G EALDLF
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLF 457
Query: 402 RQM 404
+M
Sbjct: 458 ERM 460
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 209/439 (47%), Gaps = 42/439 (9%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNT 103
K G ++ A +VF +++VT+NS+I+ K+ + +A +++ M N++ + ++
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 104 MIAGYLHNSMVEEASKLFDV-----MPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+ + S+ +EA + + + + F + ++ Y + GK +A+ +L+ V +K
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSML--AGYTQNGKMGLAL 212
+ ++I GY++KG+ ++A K F M V+ + +Y S+L G ++ G +
Sbjct: 231 -DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 213 H--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK- 269
H + E + S +++ ++ + + ++F+ I PN VSW +++ G ++G+
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349
Query: 270 ---ITEARRLF-DSMPCKNVVSWNAM-----IAAYAQDLQIDEAVKLFIKLPHKDGVSWS 320
+ E R++ DS+ + +A+ +A + + QI V + +D + S
Sbjct: 350 EMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY--GFDRDKYAGS 407
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ-----LST 375
+I+ Y + G D AR V++ + D+ + ++ Q G EA +F + L
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 376 RDTICWNSMIAGFCQSGRM-DEALDLFRQMPKKNSVSWN----TMISGYAQAGQMDSAEN 430
D + ++A C + R+ +E +LF K + N M+ +AG+++ AE
Sbjct: 468 NDVTVLSVLLA--CNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEM 525
Query: 431 IFQAMEERNIVSWNSLITG 449
+ + ++V W +L++
Sbjct: 526 LTTEVINPDLVLWRTLLSA 544
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 193/467 (41%), Gaps = 94/467 (20%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLV------------------------- 68
+H+ N I +L K + +EAV ++ I N++
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 69 ---------------TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM 113
++++ ++ K GK +A+ + D++ ++++V +I GY
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 114 VEEASKLFDVM----PERDNFSWA-LMITCYTRK----GKLEKARELLELVPDKLES--A 162
EA K F M + + +++A ++I+C K GKL +V ES A
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGL----MVKSGFESALA 303
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
S++ Y + D+ +VF + + VS+ S+++G QNG+ +AL F KM +
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 223 VVSWNLMVS----GFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEAR 274
+ + +S G N RQ+ + + + + ++ + + G AR
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDE 334
+FD++ +V+S N MI +YAQ+ EA+ LF ++ I +G
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM---------------INLG---- 464
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS----MIAGFCQ 390
+ D+ + L++ + V+E ++F+ + N M+ +
Sbjct: 465 -------LQPNDVTVLSVLLA-CNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGR 516
Query: 391 SGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+GR++EA L ++ + V W T++S +++ AE I + + E
Sbjct: 517 AGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE 563
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 193/333 (57%), Gaps = 2/333 (0%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
++++ Y +G++++A +F+ M ERN+VSW ++I+GF Q LK M +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ TF G +H L G + L +SN+LI+MY KCG ++ A ++
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGL 591
F D++SWNS+I+GYA +G A++A + F+ M+ + PD +T++G+LS+C HAGL
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+G F M E ++P HYSCLVDLLGR G L+EA ++ M +K N+ +WGSLL
Sbjct: 339 VKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
+CRVH ++ G AA LEP A+ ++ L+N++A G W+E +R LM+DK
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
PGCSWIE+ N + F ++D R I +L
Sbjct: 458 NPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 130/241 (53%), Gaps = 21/241 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
+S++ ++ +G++ +A ++F++M +RN+VSW MI+G+ V+ KL+ M +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 127 RDNFSWALMITCYTRKGKLEKAREL-LELVPDKLESACW--NSVIAGYAKKGQFSDAEKV 183
+++++ +++ T G L + R + + + L+S NS+I+ Y K G DA ++
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSGFVNSGD 238
F+ KD+VS+NSM+AGY Q+G A+ FE M K + +++ ++S ++G
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 239 LSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAM 291
+ R+ F + P N S + L G R G + EA L ++MP K N V W ++
Sbjct: 339 VKEGRKFFNLMAEHGLKPELNHYSCLVDLLG--RFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 292 I 292
+
Sbjct: 397 L 397
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTII 323
G++ A ++F+ MP +NVVSW AMI+ +AQ+ ++D +KL+ K+ + +++ ++
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 324 NGYIRVGKLDEAREVYNQ---MPCKD-IAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+ G L + R V+ Q M K + +L+S + G + +A ++F+Q S +D +
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 380 CWNSMIAGFCQSGRMDEALDLFR-QMPKK----NSVSWNTMISGYAQAGQMDSAENIFQA 434
WNSMIAG+ Q G +A++LF MPK +++++ ++S AG + F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 435 MEERNI 440
M E +
Sbjct: 349 MAEHGL 354
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AE 220
+S++ Y G+ +A KVF MP +++VS+ +M++G+ Q ++ + L + KM ++
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRL 276
N ++ ++S SG L R + + + S++ +++ + + G + +A R+
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IKLPHK----DGVSWSTIINGYIRVGK 331
FD K+VVSWN+MIA YAQ +A++LF + +P D +++ +++ G
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+ E R+ +N M AE L L N S C ++ F
Sbjct: 339 VKEGRKFFNLM------AEHGLKPEL-------------NHYS-----CLVDLLGRF--- 371
Query: 392 GRMDEALDLFRQMP-KKNSVSWNTMI 416
G + EAL+L MP K NSV W +++
Sbjct: 372 GLLQEALELIENMPMKPNSVIWGSLL 397
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++++ Y +++ A K+F ++P ++ VSW+ +I+G+ + ++D ++Y++M K +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTS 217
Query: 349 AE-----TALMSGLIQTGRVDEASKMFNQLSTRDTICW----NSMIAGFCQSGRMDEALD 399
TAL+S +G + + + Q + NS+I+ +C+ G + +A
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLITGFLQNS 454
+F Q K+ VSWN+MI+GYAQ G A +F+ M + + +++ +++
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 455 LYFDALKSLVLMGREGKKPD 474
L + K LM G KP+
Sbjct: 338 LVKEGRKFFNLMAEHGLKPE 357
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
+ G+ H LK G+I+D+++ ++L+ +Y G VE+A +VF + +++SW ++ISG+
Sbjct: 137 RTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGF 196
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
A K + +M P+ TF +LSAC+ +G QG + C ++
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV-HCQTLHMGLKSY 255
Query: 612 AEHYSCLVDLLGRMGRLEEAFNV 634
+ L+ + + G L++AF +
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRI 278
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 21/278 (7%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
G N + S H L + V+ + ++ G+VE A +VF +N+V++
Sbjct: 131 GLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWT 190
Query: 72 SMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMI-----AGYLHNSMVEEASKLFD 122
+MIS FA+ ++ +L+ KM S N ++ ++ +G L L
Sbjct: 191 AMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM 250
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
+ + S +L I+ Y + G L+ A + + +K + WNS+IAGYA+ G A +
Sbjct: 251 GLKSYLHISNSL-ISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAGYAQHGLAMQAIE 308
Query: 183 VFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----WNLMVSGF 233
+F LM K D ++Y +L+ G + FF MAE + ++ +V
Sbjct: 309 LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLL 368
Query: 234 VNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHGKI 270
G L A +L E +P PN+V W ++L HG +
Sbjct: 369 GRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 272/575 (47%), Gaps = 91/575 (15%)
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL- 311
NA+S +M G H +I + DS P + N +I Y++ L E+ +L ++L
Sbjct: 15 NAISASSMRLGRVVHARIV---KTLDSPPPPFLA--NYLINMYSK-LDHPESARLVLRLT 68
Query: 312 PHKDGVSWSTIINGYIRVGKLDEAREVYNQM------------PC--KDIAAETALMSG- 356
P ++ VSW+++I+G + G A + +M PC K +A+ ++G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 357 -----LIQTGRV-------------------DEASKMFNQLSTRDTICWNSMIAGFCQSG 392
++ GR+ D+A K+F+++ R+ WN+ I+ G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 393 RMDEALDLFRQMPK----KNSVSW-----------------------------------N 413
R EA++ F + + NS+++ N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+I Y + Q+ S+E IF M +N VSW SL+ ++QN + D S++ +
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN--HEDEKASVLYLRSRKDIV 306
Query: 474 DQSTFXXXXXXXXXXXXX--QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
+ S F ++G +H + +K+ +FV +AL+ MY KCG +E +EQ
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV--VPDQVTFIGMLSACSHA 589
F + +L++ NSLI GYA G A F++M P+ +TF+ +LSACS A
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
G G+ +F M + IEP AEHYSC+VD+LGR G +E A+ ++ M ++ +WG+
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
L ACR+H ++G AA L +L+P ++ N++ LSN A AGRW E +R ++
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 710 GKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
K G SWI V+NQ+ F + D + + IQ L
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 195/447 (43%), Gaps = 60/447 (13%)
Query: 48 KLGKVEEA--VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
+LG+V A V+ + L Y +I++++K AR + RN+VSW ++I
Sbjct: 23 RLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 106 AGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK- 158
+G N A F V+P F A R K L + +
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
L+ S Y K DA K+F+ +P ++L ++N+ ++ +G+ A+ F +
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
+ ++ F+N+ W+ + G HG + R FD
Sbjct: 201 RRIDGHPNSITFCAFLNA-----------------CSDWLHLNLGMQLHGLVL--RSGFD 241
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREV 338
+ +V N +I Y + QI + +F ++ K+ VSW +++ Y++ + ++A +
Sbjct: 242 T----DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 339 YNQMPCKDIA-----------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
Y + KDI + A M+GL + GR A + R ++++
Sbjct: 298 YLRSR-KDIVETSDFMISSVLSACAGMAGL-ELGRSIHAHAV-KACVERTIFVGSALVDM 354
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER------NIV 441
+ + G ++++ F +MP+KN V+ N++I GYA GQ+D A +F+ M R N +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 442 SWNSLIT-----GFLQNSL-YFDALKS 462
++ SL++ G ++N + FD+++S
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRS 441
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 209/502 (41%), Gaps = 104/502 (20%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F N I KL E A V T +N+V++ S+IS A+NG S A F +M +
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 97 NLV--------------SWNTMIAG-------------------------YLHNSMVEEA 117
+V S + G Y + ++A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKAREL------LELVPDKLE-----SAC--W 164
KLFD +PER+ +W I+ G+ +A E ++ P+ + +AC W
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 165 -------------------------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
N +I Y K Q +E +F M K+ VS+ S++
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV- 258
A Y QN + A + + + V + + M+S +++ + +L I + V
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 259 -TMLCG------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
T+ G + + G I ++ + FD MP KN+V+ N++I YA Q+D A+ LF ++
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 312 ------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK---DIAAE--TALMSGLIQT 360
P + +++ ++++ R G ++ ++++ M + AE + ++ L +
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 361 GRVDEASKMFNQLSTRDTI-CWNSM-----IAGFCQSGRMDEALDLFRQMPKKNSVSWNT 414
G V+ A + ++ + TI W ++ + G Q G + A +LF+ P K+S +
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL-AAENLFKLDP-KDSGNHVL 520
Query: 415 MISGYAQAGQMDSAENIFQAME 436
+ + +A AG+ A + + ++
Sbjct: 521 LSNTFAAAGRWAEANTVREELK 542
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ + + ++++ ++ K G I D+ Q FD+M ++NLV+ N++I GY H V+ A LF+
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 123 VM------PERDNFSWALMITCYTRKGKLEKARELLE-------LVPDKLESACWNSVIA 169
M P + ++ +++ +R G +E ++ + + P +C ++
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC---IVD 457
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVS-YNSMLAGYTQNGKMGLALHFFE---KMAEKNVVS 225
+ G A + MP++ +S + ++ +GK L L E K+ K+ +
Sbjct: 458 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGN 517
Query: 226 WNLMVSGFVNSGDLSSARQLFEK-----IPNPNAVSWVTM 260
L+ + F +G + A + E+ I SW+T+
Sbjct: 518 HVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITV 557
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 7/385 (1%)
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+D S++ + G + A +F K+ +WN++++ YA+AG +D A +F M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-----KPDQSTFXXXXXXXXXXXX 490
ERN++SW+ LI G++ Y +AL M +P++ T
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV-DLISWNSLIS 549
+ G +H YI K D+ + ALI MYAKCG +E A++VF A+ D+ +++++I
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 550 GYALNGYAIEAFKAFKQML-SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
A+ G E F+ F +M S+ + P+ VTF+G+L AC H GL N+G FK M+E+F I
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
P +HY C+VDL GR G ++EA + + M ++ + +WGSLL R+ +++ E A
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 394
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
RL EL+P N+ Y+ LSN++A+ GRW EV+ +R M K K+PGCS++EV+ + F+
Sbjct: 395 RLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFV 454
Query: 729 SDDSGRLRPETIQIILIGISADIRD 753
D + E I +L I +R+
Sbjct: 455 VGDESQQESERIYAMLDEIMQRLRE 479
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 163/325 (50%), Gaps = 27/325 (8%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G + A RVF ++ K+L +NS+++ +AK G I DAR+LFD+M +RN++SW+ +I GY+
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 110 HNSMVEEASKLFDVM--PE------RDN-FSWALMITCYTRKGKLEKARELLELVPD--- 157
+EA LF M P+ R N F+ + +++ R G LE+ + + +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+++ ++I YAK G A++VFN L KD+ +Y++M+ G F
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 217 KMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFAR 266
+M N V++ ++ V+ G ++ + F+ + P+ + M+ + R
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAAYAQ--DLQIDE-AVKLFIKLPHKDGVSWSTI 322
G I EA SMP + +V+ W ++++ D++ E A+K I+L + ++ +
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLL 410
Query: 323 INGYIRVGKLDEAREVYNQMPCKDI 347
N Y + G+ E + + ++M K I
Sbjct: 411 SNVYAKTGRWMEVKCIRHEMEVKGI 435
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 50/230 (21%)
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV 317
++L ++ G + A+R+FD K++ +WN+++ AYA+ ID+A KLF ++P ++ +
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCK-------------------------------- 345
SWS +INGY+ GK EA +++ +M
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 346 ------------DIAAETALMSGLIQTGRVDEASKMFNQL-STRDTICWNSMIAGFCQSG 392
DI TAL+ + G ++ A ++FN L S +D +++MI G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 393 RMDEALDLFRQMPK-----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
DE LF +M NSV++ ++ G ++ ++ F+ M E
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 40/248 (16%)
Query: 443 WNSLITGFLQN--SLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
WN +I + N S + S+ L R + PD TF +G + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA------- 552
IL G D FV +L+ MY+ CG + SA++VF DL +WNS+++ YA
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 553 -------------------LNGYAI-----EAFKAFKQMLSEE-----VVPDQVTFIGML 583
+NGY + EA F++M + V P++ T +L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SAC G QG ++ + +E + L+D+ + G LE A V + K +
Sbjct: 207 SACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 644 AGLWGSLL 651
+ +++
Sbjct: 266 VKAYSAMI 273
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 239 bits (609), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 265/517 (51%), Gaps = 19/517 (3%)
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE----ARRLFDSMPCK 283
L VSG N G +S RQL + VS + R K ++ A ++FD MP
Sbjct: 62 LRVSG--NYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRV-----GKLDE 334
+V+SWN++++ Y Q + E + LF++L D S++ + R+ G
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
++ V + ++ L+ + G +D+A +F + +DT+ WN+++A ++G++
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKL 239
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+ L F QMP ++V++N +I + ++G ++A + M N SWN+++TG++ +
Sbjct: 240 ELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSE 299
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+A + M G + D+ + G+ +H K G + + V++
Sbjct: 300 KSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVAS 359
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV- 573
ALI MY+KCG ++ AE +F + +LI WN +ISGYA NG +IEA K F Q+ E +
Sbjct: 360 ALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLK 419
Query: 574 PDQVTFIGMLSACSHAGLANQ-GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
PD+ TF+ +L+ CSH + + L F+ M+ ++ I+P EH L+ +G+ G + +A
Sbjct: 420 PDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAK 479
Query: 633 NVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASN--YITLSNMHAE 690
V++ + W +LLGAC K+L+ + A ++ EL + YI +SN++A
Sbjct: 480 QVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAY 539
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCF 727
RW EV ++R +MR+ K G SWI+ + + +
Sbjct: 540 HERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 160/330 (48%), Gaps = 38/330 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVM 124
NS++ + + + DA ++FD+M +++SWN++++GY+ + +E LF DV
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 125 PERDNFSWALMITCYTRKGKLEKA--RELLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
P +F+ AL L +L++L +K N +I Y K G DA
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VF M KD VS+N+++A ++NGK+ L L FF +M + V++N ++ FV SGD ++A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 243 RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----------------- 285
Q+ +PNPN+ SW T+L G+ K EA F M V
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 286 --VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
V W ++I A A L +D V V S +I+ Y + G L A ++ MP
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRV-----------VVASALIDMYSKCGMLKHAELMFWTMP 382
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQL 373
K++ ++SG + G EA K+FNQL
Sbjct: 383 RKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 170/430 (39%), Gaps = 109/430 (25%)
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLE-------------------SACW------- 164
SW+ ++ R G + R +EL+ D + S C
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 165 -----------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
NS++ Y DA KVF+ MP D++S+NS+++GY Q+G+ +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR-H----G 268
F ++ +V PN S+ L AR H G
Sbjct: 143 LFLELHRSDVF---------------------------PNEFSFTAALAACARLHLSPLG 175
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIR 328
++ + + NVV N +I Y + +D+AV +F + KD VSW+ I+ R
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSR 235
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
GKL+ ++QMP D L+ +++G + A ++ + + ++ WN+++ G+
Sbjct: 236 NGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGY 295
Query: 389 CQSGRMDEALDLFRQMPKKN-------------------SVSWNTMISG----------- 418
S + EA + F +M V W ++I
Sbjct: 296 VNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRV 355
Query: 419 ---------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
Y++ G + AE +F M +N++ WN +I+G+ +N +A+K + +E
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Query: 470 G-KKPDQSTF 478
KPD+ TF
Sbjct: 416 RFLKPDRFTF 425
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+HL LG + V N+V N +I ++ K G + DA +F M +++ VSWN
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA 228
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC 163
++A N +E F MP D ++ +I + + G A ++L +P+ S+
Sbjct: 229 IVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP-NSSS 287
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDL------VSYNSMLAGYTQNGKMGLALH-FFE 216
WN+++ GY + +A + F M + +S G +H
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH 347
Query: 217 KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARR 275
K+ + VV + ++ + G L A +F +P N + W M+ G+AR+G EA +
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 276 LFDSM 280
LF+ +
Sbjct: 408 LFNQL 412
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
GK+E + F + + VTYN +I F K+G ++A Q+ M N SWNT++ GY+
Sbjct: 237 GKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYV 296
Query: 110 HNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKL----ES 161
++ EA++ F M D +S ++++ + L+ KL
Sbjct: 297 NSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG-SLIHACAHKLGLDSRV 355
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
+++I Y+K G AE +F MP K+L+ +N M++GY +NG A+ F ++ ++
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 252/507 (49%), Gaps = 52/507 (10%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSW 319
+ + G + AR+LFD + ++VVSW AMI+ +++ +A+ LF ++ +D ++
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTY 116
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAA----ETALMSGLIQTGRVDEASKMFNQLST 375
+++ +G L E +++ + + A +AL+S + G+++EA F+ +
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQM------PK----------------------- 406
RD + WN+MI G+ + D + LF+ M P
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 407 ----------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF-LQNSL 455
++S ++++ Y + G + +A + + ++R+++S +LITGF QN+
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN-DLFVSN 514
DA M R K D+ +G Q+H + LKS I D+ + N
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
+LI MYAK G +E A F ++ D+ SW SLI+GY +G +A + +M E + P
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
+ VTF+ +LSACSH G G ++ M+ IE EH SC++D+L R G LEEA+ +
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 635 VRGMD--VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
+R + V ++ WG+ L ACR H N+++ + AA +L +EP NYI L++++A G
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANG 536
Query: 693 RWEEVERLRVLMRDK-RAGKLPGCSWI 718
W+ R LM++ K PG S +
Sbjct: 537 AWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 50/397 (12%)
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
C ++ + L+ ++ G V A K+F+++S RD + W +MI+ F + G +AL LF++
Sbjct: 44 CSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKE 103
Query: 404 MPKK---------------------------------------NSVSWNTMISGYAQAGQ 424
M ++ N + + ++S YA+ G+
Sbjct: 104 MHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGK 163
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
M+ A F +M+ER++VSWN++I G+ N+ + LM EGKKPD TF
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
++ ++LH +K G+ + +L+ Y KCG + +A ++ + DL+S
Sbjct: 224 SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 545 NSLISGYA-LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
+LI+G++ N +AF FK M+ + D+V ML C+ G + +
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL 343
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEE---AFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
+ I + L+D+ + G +E+ AF ++ DV++ W SL+ H N
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS----WTSLIAGYGRHGNF 399
Query: 661 E--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
E I + M ++P++ + +++L + + G+ E
Sbjct: 400 EKAIDLYNRMEHERIKPNDVT-FLSLLSACSHTGQTE 435
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 220/529 (41%), Gaps = 117/529 (22%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+N NL + +I ++ K G + AR+LFD++S+R++VSW MI+ + +A
Sbjct: 39 ITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDAL 98
Query: 119 KLFDVMPERD----NFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG---- 170
LF M D F++ ++ G L++ ++ V + C ++I
Sbjct: 99 LLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE---KGNCAGNLIVRSALL 155
Query: 171 --YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM---------- 218
YA+ G+ +A F+ M +DLVS+N+M+ GYT N + F+ M
Sbjct: 156 SLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCF 215
Query: 219 ------------------AEKNVVSWNL-----------MVSGFVNSGDLSSARQLFEKI 249
+E + ++ L +V+ +V G L++A +L E
Sbjct: 216 TFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGT 275
Query: 250 PNPNAVSWVTMLCGFARHGKIT-EARRLFDSM-----------------PCKNVVS---- 287
+ +S ++ GF++ T +A +F M C + S
Sbjct: 276 KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIG 335
Query: 288 -------------------WNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIR 328
N++I YA+ +I++AV F ++ KD SW+++I GY R
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 329 VGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTRDTI----- 379
G ++A ++YN+M + I +L+S TG+ + K+++ + + I
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREE 455
Query: 380 ---CWNSMIAGFCQSGRMDEALDLFRQ---MPKKNSVSWNTMISGYAQAGQMD---SAEN 430
C M+A +SG ++EA L R + +S +W + + G + A
Sbjct: 456 HLSCIIDMLA---RSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAAT 512
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG---KKPDQS 476
+ME R V++ +L + + N + +AL + LM G K P S
Sbjct: 513 QLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
NS+ GFC + ++ + L I Y + G + A +F + +R++V
Sbjct: 37 NSITNGFCSNLQLKDML-----------------IDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SW ++I+ F + + DAL M RE K +Q T+ + G Q+H +
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
K +L V +AL+++YA+CG++E A F +++ DL+SWN++I GY N A +F
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSA 585
F+ ML+E PD TF +L A
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H + +G+ ++L + + LI +Y K G V+ A ++F I D++SW ++IS ++ GY
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
+A FK+M E+V +Q T+ +L +C G +G+ + + + L S
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR-S 152
Query: 617 CLVDLLGRMGRLEEA---FNVVRGMD-VKANAGLWGSLLGAC 654
L+ L R G++EEA F+ ++ D V NA + G AC
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 151/316 (47%), Gaps = 28/316 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWN 102
+ GK+EEA F + ++LV++N+MI + N + LF M + + ++
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+++ + +E S+L + + R + ++ Y + G L A +L E +
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 159 LESACWNSVIAGYAKKGQF-SDAEKVF-NLMPVK---DLVSYNSMLAGYTQ--NGKMGLA 211
+C ++I G++++ SDA +F +++ +K D V +SML T + +G
Sbjct: 279 DLLSC-TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 212 LHFFEKMAEK---NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
+H F + + +V N ++ + SG++ A FE++ + SW +++ G+ RHG
Sbjct: 338 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 269 KITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----W 319
+A L++ M + + V++ ++++A + Q + K++ + +K G+
Sbjct: 398 NFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHL 457
Query: 320 STIINGYIRVGKLDEA 335
S II+ R G L+EA
Sbjct: 458 SCIIDMLARSGYLEEA 473
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 236 bits (603), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 208/407 (51%), Gaps = 31/407 (7%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
D +T L+S + G +D K+FN + D +C +M+ + G + A LF MP
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+++ ++WN MISGYAQ G+ A N+F M+ + + L AL
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL----- 256
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
DQ G H YI ++ + ++ L+ +YAKCG
Sbjct: 257 --------DQ------------------GRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E A +VF +E ++ +W+S ++G A+NG+ + + F M + V P+ VTF+ +L
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CS G ++G F M +F IEP EHY CLVDL R GRLE+A ++++ M +K +A
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL A R++KNLE+G A+ ++ ELE N Y+ LSN++A++ W+ V +R M+
Sbjct: 411 VWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMK 470
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGISADIR 752
K K PGCS +EV ++ F D + I + IS +R
Sbjct: 471 SKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLR 517
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 40/250 (16%)
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+ +I+ Y +G LD +V+N +PC D TA+++ + G V A K+F + RD I
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVS------------------W----- 412
WN+MI+G+ Q G EAL++F M K N V+ W
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 413 ------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
T++ YA+ G M+ A +F MEE+N+ +W+S + G N L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAM 519
+ LM ++G P+ TF G + + + G L L+ +
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 520 YAKCGRVESA 529
YA+ GR+E A
Sbjct: 387 YARAGRLEDA 396
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 173/382 (45%), Gaps = 39/382 (10%)
Query: 71 NSMISVFAKNGKISD------ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
+ ++ F K +SD A Q+ D+ + L + N+MI + + + E++ +
Sbjct: 38 DHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRI 97
Query: 122 -----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL---ESACWNSVIAGYAK 173
D+ P DN++ ++ T E ++ + + + +I+ YA+
Sbjct: 98 LSSGNDLKP--DNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAE 155
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
G KVFN +P D V +M+ + G + A FE M E++ ++WN M+SG+
Sbjct: 156 LGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGY 215
Query: 234 VNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
G+ A +F + N V+ +++L + G + + R + +N +
Sbjct: 216 AQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE-RNKIKIT 274
Query: 290 AMIAA-----YAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
+A YA+ +++A+++F + K+ +WS+ +NG G ++ E+++ M
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 345 KDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMD 395
+ +++ G G VDE + F+ + I + ++ + ++GR++
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Query: 396 EALDLFRQMP-KKNSVSWNTMI 416
+A+ + +QMP K ++ W++++
Sbjct: 395 DAVSIIQQMPMKPHAAVWSSLL 416
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 117/219 (53%), Gaps = 12/219 (5%)
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
++S + G L S ++F IP P+ V M+ AR G + AR+LF+ MP ++ ++W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 289 NAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
NAMI+ YAQ + EA+ +F ++ +GV+ ++++ ++G LD+ R ++ +
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
I L + L+ + G +++A ++F + ++ W+S + G +G ++ L+L
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 401 FRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAM 435
F M + N+V++ +++ G + G +D + F +M
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 140/321 (43%), Gaps = 44/321 (13%)
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSL---YFDALKSLVLMGREGKKPDQSTFXXX 481
+D A I E+ + + NS+I ++ + FD + ++ G + KPD T
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGND-LKPDNYTVNFL 114
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+ G Q+H ++ G+ ND V LI++YA+ G ++S +VF +I C D
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 542 -------------------------------ISWNSLISGYALNGYAIEAFKAFKQMLSE 570
I+WN++ISGYA G + EA F M E
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
V + V I +LSAC+ G +QG +E I+ + LVDL + G +E+
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVH----KNLEIGEFAAMRLSELEPHNASNYITLSN 686
A V GM+ K N W S L ++ K LE+ F+ M+ + P NA ++++
Sbjct: 294 AMEVFWGMEEK-NVYTWSSALNGLAMNGFGEKCLEL--FSLMKQDGVTP-NAVTFVSVLR 349
Query: 687 MHAEAGRWEEVERLRVLMRDK 707
+ G +E +R MR++
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNE 370
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 40/292 (13%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
+LG ++ +VF++ + V +M++ A+ G + AR+LF+ M +R+ ++WN MI+
Sbjct: 154 AELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMIS 213
Query: 107 GYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR---ELLELVPDKL 159
GY EA +F +M + + + +++ T+ G L++ R +E K+
Sbjct: 214 GYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI 273
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+++ YAK G A +VF M K++ +++S L G NG L F M
Sbjct: 274 TVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK 333
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
+ V PNAV++V++L G + G + E +R FDS
Sbjct: 334 QDGV---------------------------TPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 280 MPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-WSTIING 325
M + + + ++ YA+ ++++AV + ++P K + WS++++
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 191/335 (57%), Gaps = 2/335 (0%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+++ +++ Y+ G ++ A +F M R++VSWN +I F L+ AL MG
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
EG D T +G LH + +FVSNALI MYAKCG +E
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
+A VF + D+++WNS+I GY ++G+ +EA F++M++ V P+ +TF+G+L CS
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLW 647
H GL +G++ F+ M F + P +HY C+VDL GR G+LE + ++ + LW
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
+LLG+C++H+NLE+GE A +L +LE NA +Y+ ++++++ A + +R L+R
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 708 RAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
+PG SWIE+ +Q+ F+ DD ++ PE+ I
Sbjct: 441 DLQTVPGWSWIEIGDQVHKFVVDD--KMHPESAVI 473
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 422 AGQMDSAENIFQAMEERNIVS-WNSLITGFLQNSLYFDALKSLVLMGR----EGKKPDQS 476
G + A+ +F + S WN LI GF +S L S++ R +PD
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSS---SPLNSILFYNRMLLSSVSRPDLF 108
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
TF ++H +++SG+++D V+ +L+ Y+ G VE A +VF +
Sbjct: 109 TFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEM 168
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
DL+SWN +I ++ G +A +K+M +E V D T + +LS+C+H N G+
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV 228
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
L + + D E + L+D+ + G LE A V GM K + W S++ V
Sbjct: 229 MLHR-IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGV 286
Query: 657 HKN--LEIGEFAAMRLSELEPHNASNYITL 684
H + I F M S + P NA ++ L
Sbjct: 287 HGHGVEAISFFRKMVASGVRP-NAITFLGL 315
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 148/331 (44%), Gaps = 45/331 (13%)
Query: 25 KLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKN 80
++ + S+ +F N + ++ + + + + + I + S++ ++ N
Sbjct: 96 RMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN 155
Query: 81 GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMI 136
G + A ++FD+M R+LVSWN MI + H + +A ++ M D+++ ++
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 137 TCYTRKGKLEKARELLELVPD-KLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
+ L L + D + ES + N++I YAK G +A VFN M +D++
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
++NSM+ GY +G A+ FF KM V PN
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGV---------------------------RPN 308
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKL- 307
A++++ +L G + G + E F+ M + NV + M+ Y + Q++ ++++
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 308 FIKLPHKDGVSWSTIINGYIRVGKLDEAREV 338
+ H+D V W T++ G ++ + E EV
Sbjct: 369 YASSCHEDPVLWRTLL-GSCKIHRNLELGEV 398
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 144/350 (41%), Gaps = 53/350 (15%)
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIAAYAQDLQIDEAVKLFI 309
+P+ + + C + G ++ A+ LFD S WN +I ++ ++ +
Sbjct: 36 HPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYN 95
Query: 310 KL-----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQT 360
++ D +++ + R+ + + E++ + D T+L+
Sbjct: 96 RMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN 155
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS--------- 411
G V+ ASK+F+++ RD + WN MI F G ++AL ++++M +
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 412 ------------------------------WNTMISGYAQAGQMDSAENIFQAMEERNIV 441
N +I YA+ G +++A +F M +R+++
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
+WNS+I G+ + +A+ M G +P+ TF + G + H I
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEI 334
Query: 502 LKSGY--INDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLI 548
+ S + ++ ++ +Y + G++E++ ++ A C D + W +L+
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 129/301 (42%), Gaps = 66/301 (21%)
Query: 219 AEKNVVSWNLMVSGFVNSGD-----LSSARQLFEKIPNP--------------------- 252
++ + WN ++ GF NS L R L + P
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 253 --------------NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
+A+ +++ ++ +G + A ++FD MP +++VSWN MI ++
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 299 LQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET--- 351
++A+ ++ ++ ++ D + +++ V L+ ++ ++ C DI E+
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH-RIAC-DIRCESCVF 244
Query: 352 ---ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
AL+ + G ++ A +FN + RD + WNSMI G+ G EA+ FR+M
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLI-----TGFLQNS 454
+ N++++ ++ G + G + F+ M + N+ + ++ G L+NS
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 455 L 455
L
Sbjct: 365 L 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+ M M H++ VF N I K G +E A+ VF+ ++++T+NSMI
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 77 FAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS- 131
+ +G +A F KM + N +++ ++ G H +V+E + F++M + + +
Sbjct: 284 YGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTP 343
Query: 132 ----WALMITCYTRKGKLEKARELLELVPDKLESACWNSVIA 169
+ M+ Y R G+LE + E++ + W +++
Sbjct: 344 NVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 180/666 (27%), Positives = 304/666 (45%), Gaps = 103/666 (15%)
Query: 164 WNSVIAGYA---KKG-QFSDAEKVFNLM-----PVKDLVSYNSMLAGYTQNGKMGLALHF 214
W V++GY+ + G QF+D VF ++ + L NS+ Y + G + L
Sbjct: 25 WREVVSGYSEIQRAGVQFNDP-FVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLRE 83
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLC------ 262
F+ M ++ VSWN++V G ++ G F K+ PN + + V C
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD 143
Query: 263 GFARHGKITE------------------------ARRLFDSMPCKNVVSWNAMIAAYAQD 298
G HG + AR+LFD M ++V+SW+ +I +Y Q
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 299 LQIDEAVKLFIKLPHK-----DGVSWSTIINGYIRVGKLDEAREVYN-----QMPCKDIA 348
+ +KLF ++ H+ D V+ ++++ + +D R V+ D+
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
+L+ + VD A ++F++ + R+ + WNS++AGF + R DEAL++F M
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 405 ----------------------PKK-------------NSVSWNTMISGYAQAGQMDSAE 429
P K N V+ +++I Y +D A
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+ +M +++VS +++I+G +A+ M P+ T
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSA 440
Query: 490 XXQVGNQLHEY-ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
+ H I +S IND+ V +++ YAKCG +E A + F I ++ISW +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
S YA+NG +A F +M + P+ VT++ LSAC+H GL +GL +FK MVE+
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH- 559
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGM--DVKANAGLWGSLLGACRVH-KNLEIGEF 665
+P +HYSC+VD+L R G ++ A +++ + DVKA A WG++L CR K L I
Sbjct: 560 KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSE 619
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
+ ELEP +S Y+ S+ A WE+V +R L+++++ + G S + N +
Sbjct: 620 VVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAK 679
Query: 726 CFLSDD 731
FL+ D
Sbjct: 680 RFLAGD 685
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 225/531 (42%), Gaps = 77/531 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA----SKLFDVMPE 126
NS+ + K G + + FD M+ R+ VSWN ++ G L EE SKL E
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 127 RDNFSWALMI-TCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFN 185
+ + L+I C + EK + S+ NS++ YA S A K+F+
Sbjct: 125 PNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFD 183
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVNSGDLS 240
M +D++S++ ++ Y Q+ + + L F++M E + V+ ++ D+
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 241 --------SARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
S R+ F+ S + M +++ + A R+FD C+N+VSWN+++
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDM---YSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI----- 347
A + + + DEA+++F + + + +RV K E +PCK I
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE-----QPLPCKSIHGVII 355
Query: 348 --------AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
A ++L+ VD+A + + ++ +D + ++MI+G +GR DEA+
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 400 LF---RQMPKKNSV----------------SW------------------NTMISGYAQA 422
+F R P +V W +++ YA+
Sbjct: 416 IFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 475
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
G ++ A F + E+NI+SW +I+ + N L AL M ++G P+ T+
Sbjct: 476 GAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAAL 535
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
+ G + + +++ + L + ++ M ++ G +++A ++
Sbjct: 536 SACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELI 586
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 191/419 (45%), Gaps = 54/419 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
++ NS+I +++K + A ++FD+ + RN+VSWN+++AG++HN +EA ++F +M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 125 ---PERDNFS-WALMITCYTRKGKLEKARELLELVPDKLES--ACWNSVIAGYAKKGQFS 178
E D + +L+ C + L ++ ES +S+I Y
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-KNVVSWNLMVSGFVNSG 237
DA V + M KD+VS ++M++G G+ A+ F M + N ++ +++ S
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSA 440
Query: 238 DLSSAR-----QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
DL +++ + + + +++ +A+ G I ARR FD + KN++SW +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+AYA + D+A+ LF ++ K GY + A
Sbjct: 501 SAYAINGLPDKALALFDEMKQK----------GYT-----------------PNAVTYLA 533
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEALDLFRQMP--- 405
+S G V + +F + D ++ ++ ++G +D A++L + +P
Sbjct: 534 ALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDV 593
Query: 406 KKNSVSWNTMISGYAQAGQ--MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
K + +W ++SG + + ++E + + +E + S +G+L S F A KS
Sbjct: 594 KAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCS-----SGYLLASSTFAAEKS 647
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 61/348 (17%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
VF N I K V+ A RVF T +N+V++NS+++ F N + +A ++F M Q
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 96 R---------------------------------------NLVSWNTMIAGYLHNSMVEE 116
N V+ +++I Y S+V++
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD--------KLESACWNSVI 168
A + D M +D S + MI+ G+ ++A + + D L +AC +
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNAC---SV 438
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
+ + +++ + + + D+ S++ Y + G + +A F+++ EKN++SW +
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
++S + +G A LF+++ PNAV+++ L G + + +F SM ++
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 285 ----VVSWNAMIAAYAQDLQIDEAVKLFIKLPH--KDGVS-WSTIING 325
+ ++ ++ ++ +ID AV+L LP K G S W I++G
Sbjct: 559 HKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
K G +E A R F KN++++ +IS +A NG A LFD+M Q+ N V++
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS----WALMITCYTRKGKLEKARELLELVPDK 158
++ H +V++ +F M E D+ ++ ++ +R G+++ A EL++ +P+
Sbjct: 533 AALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Query: 159 LE--SACWNSVIAGYAK--KGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
++ ++ W ++++G K +E V ++ ++ L S +LA T
Sbjct: 593 VKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASST 641
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 182/322 (56%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
YA +G + +A +F++++ R+++ WN++I+G++Q L + L M + PDQ TF
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
+ G + H ++K +++ V +AL+ MY KC +VF +
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
++I+W SLISGY +G E K F++M E P+ VTF+ +L+AC+H GL ++G +
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
F M D+ IEP +HY+ +VD LGR GRL+EA+ V K + +WGSLLGACR+H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 659 NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
N+++ E AA + EL+P N NY+ +N +A G E ++R M + K PG S I
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Query: 719 EVQNQIQCFLSDDSGRLRPETI 740
E+Q ++ F+ DD+ E I
Sbjct: 453 ELQGEVHRFMKDDTSHRLSEKI 474
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 139/290 (47%), Gaps = 20/290 (6%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL-FDVMPER---D 128
++ ++A +G + A LF + R+L+ WN MI+GY+ + +E + +D+ R D
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLESA---CWNSVIAGYAKKGQFSDAEKVFN 185
+++A + + +LE + ++ + + ++++ Y K FSD +VF+
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSS 241
+ ++++++ S+++GY +GK+ L FEKM E+ N V++ ++++ + G +
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 242 ARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA- 294
+ F + P + M+ R G++ EA PCK + W +++ A
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 295 --YAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+ ++ A F++L +G ++ NGY G + A +V +M
Sbjct: 389 RIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH---- 313
V +L +A G + A LF S+ ++++ WNAMI+ Y Q E + ++ +
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKM 369
D +++++ + +L+ + + M + +I ++AL+ + + ++
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQM 425
F+QLSTR+ I W S+I+G+ G++ E L F +M + N V++ +++ G +
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 326
Query: 426 DSAENIFQAME 436
D F +M+
Sbjct: 327 DKGWEHFYSMK 337
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 137/316 (43%), Gaps = 53/316 (16%)
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSM 198
G L ++ ++ +L+P WN++I+GY +KG + ++ M V D ++ S+
Sbjct: 163 GILFRSLKIRDLIP-------WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 199 LAGYT-----QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
+ ++GK A+ ++ + N++ + +V + S ++F+++ N
Sbjct: 216 FRACSALDRLEHGKRAHAV-MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRN 274
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMP---CK-NVVSWNAMIAAYAQDLQIDEAVKLFI 309
++W +++ G+ HGK++E + F+ M C+ N V++ ++ A +D+ + F
Sbjct: 275 VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFY 334
Query: 310 KLPHKDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD 364
+ G+ ++ +++ R G+L EA E + PCK+ + L+ R+
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE---HPPVWGSLLGACRIH 391
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQ 424
K+ +T+ F ++ N ++ +GYA G
Sbjct: 392 GNVKLLELAATK------------------------FLELDPTNGGNYVVFANGYASCGL 427
Query: 425 MDSAENIFQAMEERNI 440
++A + + ME +
Sbjct: 428 REAASKVRRKMENAGV 443
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G ++H + G+ + ++ L+ +YA G +++A +F +++ DLI WN++ISGY
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS-----HAGLANQGLDLFKCMVEDFAI 608
G E + M +VPDQ TF + ACS G + + +C+ + +
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFA 666
+ S LVD+ + + V + + N W SL+ H + + F
Sbjct: 247 D------SALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFE 299
Query: 667 AMRLSELEPHNASNYITLS 685
M+ P+ + + L+
Sbjct: 300 KMKEEGCRPNPVTFLVVLT 318
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 43/238 (18%)
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF------RQMP-------- 405
+G + A +F L RD I WN+MI+G+ Q G E L ++ R +P
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 406 -------------------------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
K N + + ++ Y + +F + RN+
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
++W SLI+G+ + + LK M EG +P+ TF G + H Y
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFY 334
Query: 501 ILKSGYINDLFVSN--ALIAMYAKCGRVESAEQVFTAIECVDLIS-WNSLISGYALNG 555
+K Y + + A++ + GR++ A + C + W SL+ ++G
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
GK AV + I N++ ++++ ++ K SD ++FD++S RN+++W ++I+GY
Sbjct: 228 GKRAHAVMI-KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 110 HNSMVEEASKLFDVMPE---RDN-FSWALMITCYTRKGKLEKARE-LLELVPD---KLES 161
++ V E K F+ M E R N ++ +++T G ++K E + D + E
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEG 346
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS-YNSMLAGYTQNGK---MGLALHFFEK 217
+ +++ + G+ +A + P K+ + S+L +G + LA F +
Sbjct: 347 QHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLE 406
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
+ N ++ + +G+ + G +A ++ K+ N
Sbjct: 407 LDPTNGGNYVVFANGYASCGLREAASKVRRKMEN 440
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
K + RVF +N++T+ S+IS + +GK+S+ + F+KM + N V++
Sbjct: 256 KCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLV 315
Query: 104 MIAGYLHNSMVEEASKLF-----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
++ H +V++ + F D E + +A M+ R G+L++A E + P K
Sbjct: 316 VLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCK 375
Query: 159 LESACWNSVIAG 170
W S++
Sbjct: 376 EHPPVWGSLLGA 387
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 252/512 (49%), Gaps = 56/512 (10%)
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ-DLQIDEAVKL-FIKLPH---- 313
+L + + + +A +LFD MP +N+V+WN +I Q D + L F L
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 314 ---KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEA 366
D VS+ +I + +++ M + + + T+L+ + G + EA
Sbjct: 137 DVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP------KKNSVSWNTMISG-- 418
++F + RD + WN++++ + +G +DEA L + M + + ++++++S
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR 256
Query: 419 -----------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLITG 449
YA++ + A F++M RN+VSWN++I G
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
F QN +A++ M E +PD+ TF Q+ + K G +
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
L V+N+LI+ Y++ G + A F +I DL+SW S+I A +G+A E+ + F+ ML
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML- 435
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
+++ PD++TF+ +LSACSH GL +GL FK M E + IE EHY+CL+DLLGR G ++
Sbjct: 436 QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFID 495
Query: 630 EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHA 689
EA +V+ M + + + G C +H+ E ++ A +L E+EP NY LSN +
Sbjct: 496 EASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYV 555
Query: 690 EAGRWEEVERLRVLMRDKR---AGKLPGCSWI 718
G W + LR R++R K PGCSW+
Sbjct: 556 SEGHWNQAALLR--KRERRNCYNPKTPGCSWL 585
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 200/409 (48%), Gaps = 39/409 (9%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL----------HNS 112
I+ +L N ++ + K + DA +LFD+M RN+V+WN +I G + H
Sbjct: 67 IYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLG 126
Query: 113 MVEEASKLF-DVMPERDNFSWALMITCYTRKGKLEKARELLEL-VPDKLESACW--NSVI 168
+ LF DV D+ S+ +I T ++ +L L V LES+C+ S++
Sbjct: 127 FCYLSRILFTDV--SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWN 227
Y K G +A +VF + +DLV +N++++ Y NG + A + M ++KN +
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGD 244
Query: 228 LMV-SGFVNSGDLSSARQ----LFE---KIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
S +++ + +Q LF+ + P A + + M +A+ +++AR F+S
Sbjct: 245 YFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNM---YAKSNHLSDARECFES 301
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEA 335
M +NVVSWNAMI +AQ+ + EA++LF ++ D ++++++++ + + E
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 336 REVYNQMPCKD----IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
++V + K ++ +L+S + G + EA F+ + D + W S+I
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 392 GRMDEALDLFRQMPKK---NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
G +E+L +F M +K + +++ ++S + G + F+ M E
Sbjct: 422 GFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 193/397 (48%), Gaps = 32/397 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDN- 129
S++ + K G I +AR++F+ + R+LV WN +++ Y+ N M++EA L +M N
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNR 240
Query: 130 -----FSW-ALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
F++ +L+ C +GK + +L V + + +++ YAK SDA +
Sbjct: 241 FRGDYFTFSSLLSACRIEQGK--QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA- 242
F M V+++VS+N+M+ G+ QNG+ A+ F +M +N+ L + ++S SA
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 243 ---RQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
+Q+ + + ++ +++ ++R+G ++EA F S+ ++VSW ++I A
Sbjct: 359 WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGAL 418
Query: 296 AQDLQIDEAVKLFIKLPHK---DGVSWSTIINGYIRVGKLDEAREVYNQMP-CKDIAAE- 350
A +E++++F + K D +++ +++ G + E + +M I AE
Sbjct: 419 ASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 351 ---TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL-----DLFR 402
T L+ L + G +DEAS + N + T + + G C E++ L
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Query: 403 QMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
P K V+++ + + Y G + A + + E RN
Sbjct: 539 IEPTK-PVNYSILSNAYVSEGHWNQAA-LLRKRERRN 573
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
GK A+ +F + ++ ++++++AK+ +SDAR+ F+ M RN+VSWN MI G+
Sbjct: 260 GKQIHAI-LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 110 HNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE-LVPDKLESACWNSVI 168
N EA +LF M LLE L PD+L A SV+
Sbjct: 319 QNGEGREAMRLFGQM--------------------------LLENLQPDELTFA---SVL 349
Query: 169 AGYAKKGQFSDAEKVFNLMPVK---DLVSY-NSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+ AK + ++V ++ K D +S NS+++ Y++NG + AL F + E ++V
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLV 409
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKI---PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
SW ++ + G + Q+FE + P+ ++++ +L + G + E R F M
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM- 468
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQ 341
F K+ +D ++ +I+ R G +DEA +V N
Sbjct: 469 ------------------------TEFYKIEAEDE-HYTCLIDLLGRAGFIDEASDVLNS 503
Query: 342 MPCKDIAAETALMSG 356
MP + A +G
Sbjct: 504 MPTEPSTHALAAFTG 518
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA--- 552
Q H +++K G N LF+ N L+ Y K + A+++F + ++++WN LI G
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 553 --LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
N A F ++L +V D V+F+G++ C+ + G+ L C++ +E
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL-HCLMVKQGLES 175
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ LV G+ G + EA V + + + LW +L+ +
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSS 217
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 229 bits (585), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 179/304 (58%), Gaps = 2/304 (0%)
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
I+ Y +AG+ ++A +F ER + SWN++I G +A++ V M R G +PD
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYIL--KSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
T + QLH+ +L K+ +D+ + N+LI MY KCGR++ A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
+ +++SW+S+I GYA NG +EA + F+QM V P+++TF+G+LSAC H GL
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+G F M +F +EP HY C+VDLL R G+L+EA VV M +K N +WG L+G
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
C ++E+ E+ A + ELEP N Y+ L+N++A G W++VER+R LM+ K+ K+P
Sbjct: 399 CEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIP 458
Query: 714 GCSW 717
S+
Sbjct: 459 AYSY 462
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 154/328 (46%), Gaps = 25/328 (7%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
IH LGK +V V + + I+++ K G+ +AR++FD+ +R L SWN
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCE-SGFITLYCKAGEFENARKVFDENPERKLGSWNA 188
Query: 104 MIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELV---- 155
+I G H EA ++F M E D+F+ + G L A +L + V
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 156 -PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
+K + NS+I Y K G+ A +F M +++VS++SM+ GY NG AL
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 215 FEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFA 265
F +M E N +++ ++S V+ G + + F + + P + ++ +
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLS 368
Query: 266 RHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQ--DLQIDEAVKLF-IKL-PHKDGVSWS 320
R G++ EA+++ + MP K NV+ W ++ + D+++ E V + ++L P DGV +
Sbjct: 369 RDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV-YV 427
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ N Y G + V M K +A
Sbjct: 428 VLANVYALRGMWKDVERVRKLMKTKKVA 455
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 5/268 (1%)
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WN+++ ++++ DA++ + M R PD+ + +G +LH +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
+ G++ D F + I +Y K G E+A +VF L SWN++I G G A EA +
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL-AEHYSCLVDL 621
F M + PD T + + ++C G + L KC+++ E + L+D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKN-LEIGE-FAAMRLSELEPHNAS 679
G+ GR++ A ++ M + N W S++ + N LE E F MR + P N
Sbjct: 265 YGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP-NKI 322
Query: 680 NYITLSNMHAEAGRWEEVERLRVLMRDK 707
++ + + G EE + +M+ +
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMI 292
GD+ +R L + P A W ++ + RH +A +++ M V+ S +I
Sbjct: 68 GDIFRSRILDQY---PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 293 AAYAQ--DLQIDE-----AVKL-FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
A Q D + + AV+L F+ D S I Y + G+ + AR+V+++ P
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVG----DEFCESGFITLYCKAGEFENARKVFDENPE 180
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDL 400
+ + + A++ GL GR +EA +MF + D S+ A G + A L
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 401 FRQM------PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+ + K + + N++I Y + G+MD A +IF+ M +RN+VSW+S+I G+ N
Sbjct: 241 HKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANG 300
Query: 455 LYFDALKSLVLMGREGKKPDQSTF 478
+AL+ M G +P++ TF
Sbjct: 301 NTLEALECFRQMREFGVRPNKITF 324
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ---- 95
N I GK G+++ A +F +N+V+++SMI +A NG +A + F +M +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
N +++ +++ +H +VEE F +M + ++ +R G+L++A++
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
++E +P K W ++ G K G AE V M
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYM 415
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 245/500 (49%), Gaps = 55/500 (11%)
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIIN--- 324
E RR+FD K+ +SW +M++ Y + +A+++F+++ + + S+ +
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACS 174
Query: 325 --GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
G +R+G+ + + + T + VD A ++F+++ D ICW
Sbjct: 175 ELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD-ARRVFDEMPEPDVICWT 233
Query: 383 SMIAGFCQSGRMDEALDLFRQMPK------------------------------------ 406
++++ F ++ +EAL LF M +
Sbjct: 234 AVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT 293
Query: 407 ----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
N V ++++ Y + G + A +F M ++N VSW++L+ G+ QN + A++
Sbjct: 294 NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
RE ++ D F ++G ++H ++ G ++ V +ALI +Y K
Sbjct: 354 F----REMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 523 CGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
G ++SA +V++ + ++I+WN+++S A NG EA F M+ + + PD ++FI +
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
L+AC H G+ ++G + F M + + I+P EHYSC++DLLGR G EEA N++ + +
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Query: 643 NAGLWGSLLGACRVHKNL-EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLR 701
+A LWG LLG C + + + E A R+ ELEP +Y+ LSNM+ GR + +R
Sbjct: 530 DASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIR 589
Query: 702 VLMRDKRAGKLPGCSWIEVQ 721
LM + K G SWI+
Sbjct: 590 KLMVRRGVAKTVGQSWIDAH 609
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 221/467 (47%), Gaps = 74/467 (15%)
Query: 38 NKNQQIIHLGKLGKVEEAVRVFSNT------------------------------IHKNL 67
K +I+ L KLG++ EA+R+ ++T H ++
Sbjct: 28 TKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHV 87
Query: 68 VTY---------NSMISVFAKNGK-ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V NS++S++ K G + + R++FD ++ +SW +M++GY+ +E
Sbjct: 88 VKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG---KEH 144
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC-------WNSVIAG 170
K +V E S+ L +T ++ EL E+ + WN I+
Sbjct: 145 VKALEVFVEM--VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISS 202
Query: 171 -----YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-KNVV 224
Y + DA +VF+ MP D++ + ++L+ +++N AL F M K +V
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 225 ----SWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRL 276
++ +++ N L +++ K+ N V ++L + + G + EAR++
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
F+ M KN VSW+A++ Y Q+ + ++A+++F ++ KD + T++ + + +
Sbjct: 323 FNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGK 382
Query: 337 EVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
E++ Q + ++ E+AL+ ++G +D AS++++++S R+ I WN+M++ Q+G
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 393 RMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
R +EA+ F M KK + +S+ +++ G +D N F M
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 201/435 (46%), Gaps = 32/435 (7%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMIS-----VFAKNGKISDARQLFD 91
F + + +LG+V R F + + +N IS ++ N + DAR++FD
Sbjct: 164 FTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE-----RDNFSWALMITCYTRKGKLE 146
+M + +++ W +++ + N + EEA LF M D ++ ++T +L+
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 147 KARELL-ELVPDKLES--ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
+ +E+ +L+ + + S +S++ Y K G +A +VFN M K+ VS++++L GY
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 204 QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVT 259
QNG+ A+ F +M EK++ + ++ + +++ + N +
Sbjct: 343 QNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----D 315
++ + + G I A R++ M +N+++WNAM++A AQ+ + +EAV F + K D
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQMP-CKDIAAETALMSGLI----QTGRVDEASKMF 370
+S+ I+ G +DE R + M I T S +I + G +EA +
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Query: 371 NQLSTRDTICWNSMIAGFC----QSGRMDEAL-DLFRQMPKKNSVSWNTMISGYAQAGQM 425
+ R+ ++ G C + R+ E + ++ K +S+ + + Y G+
Sbjct: 523 ERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRH 582
Query: 426 DSAENIFQAMEERNI 440
A NI + M R +
Sbjct: 583 GDALNIRKLMVRRGV 597
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 23/312 (7%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
++ +N I N+V +S++ ++ K G + +ARQ+F+ MS++N VSW+ ++ GY N E+
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAG------ 170
A ++F M E+D + + ++ L R E+ + C+ +VI
Sbjct: 350 AIEIFREMEEKDLYCFGTVLKACA---GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDL 406
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSW 226
Y K G A +V++ M +++++++N+ML+ QNG+ A+ FF M +K + +S+
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF 466
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+++ ++G + R F + P + M+ R G EA L +
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE 526
Query: 282 CKNVVS-WNAMI---AAYAQDLQIDEAV-KLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
C+N S W ++ AA A ++ E + K ++L K +S+ + N Y +G+ +A
Sbjct: 527 CRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDAL 586
Query: 337 EVYNQMPCKDIA 348
+ M + +A
Sbjct: 587 NIRKLMVRRGVA 598
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 229 bits (583), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 230/470 (48%), Gaps = 12/470 (2%)
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK 345
VS +A + +D A K KL W+ +I G+ +++ VY QM
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTR--------DTICWNSMIAGFCQSGRMDEA 397
+ + L+++ K+ L D N++I + A
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
LF +MP KN V+WN+++ YA++G + SA +F M ER++V+W+S+I G+++ Y
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 458 DALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
AL+ M R G K ++ T G +H YIL + + +L
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSL 282
Query: 517 IAMYAKCGRVESAEQVF--TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
I MYAKCG + A VF +++ D + WN++I G A +G+ E+ + F +M ++ P
Sbjct: 283 IDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP 342
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D++TF+ +L+ACSH GL + FK + E A EP +EHY+C+VD+L R G +++A +
Sbjct: 343 DEITFLCLLAACSHGGLVKEAWHFFKSLKESGA-EPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
+ M +K + G+LL C H NLE+ E +L EL+PHN Y+ L+N++A ++
Sbjct: 402 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 461
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
+R M K K+ G S +++ F++ D + I +L
Sbjct: 462 RAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 198/426 (46%), Gaps = 31/426 (7%)
Query: 41 QQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
Q + +L K+ + + + V+ S + +G + A + K+S
Sbjct: 16 HQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG 75
Query: 101 WNTMIAGYLHNSMVEEASKL------FDVMPERDNFSWALMITCYTRKGKLEKAREL-LE 153
WN +I G+ ++ E++ + F ++P D+ ++ ++ +R + L
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLP--DHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 154 LVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
+V LE + N++I Y + A K+F+ MP K+LV++NS+L Y ++G + A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFAR 266
F++M+E++VV+W+ M+ G+V G+ + A ++F+++ N V+ V+++C A
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 267 HGKI----TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK--LPHKDGVSWS 320
G + T R + D V+ ++I YA+ I +A +F + + D + W+
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQL--- 373
II G G + E+ +++++M I + L++ G V EA F L
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 374 -STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMDSAENI 431
+ + + M+ ++G + +A D +MP K + S +++G G ++ AE +
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 432 FQAMEE 437
+ + E
Sbjct: 434 GKKLIE 439
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 159/342 (46%), Gaps = 36/342 (10%)
Query: 43 IIHL-GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
+IH+ G A ++F HKNLVT+NS++ +AK+G + AR +FD+MS+R++V+W
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 102 NTMIAGYLHNSMVEEASKLFDVM-----PERDNFSWALMITCYTRKGKLEKARELLELVP 156
++MI GY+ +A ++FD M + + + +I G L + + + +
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 157 D---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK--DLVSYNSMLAGYTQNGKMGLA 211
D L S+I YAK G DA VF VK D + +N+++ G +G + +
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 212 LHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG 263
L F KM E + +++ +++ + G + A F+ + P + + M+
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDV 388
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ------DLQIDEAV-KLFIKL-PHKD 315
+R G + +A MP K +M+ A +L++ E V K I+L PH D
Sbjct: 389 LSRAGLVKDAHDFISEMPIKPT---GSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 316 G--VSWSTI--INGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
G V + + IN R + RE + K IA + L
Sbjct: 446 GRYVGLANVYAINKQFRAAR--SMREAMEKKGVKKIAGHSIL 485
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 229 bits (583), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 231/431 (53%), Gaps = 28/431 (6%)
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEA 366
LF+ +P D ++++I ++ Y +M +++ + +I++
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS------ 116
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMD 426
+ L + +++++GF LD + Q +++ Y++ G M+
Sbjct: 117 CADLSALRIGKGVHCHAVVSGF--------GLDTYVQA---------ALVTFYSKCGDME 159
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
A +F M E++IV+WNSL++GF QN L +A++ M G +PD +TF
Sbjct: 160 GARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACA 219
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNS 546
+G+ +H+YI+ G ++ + ALI +Y++CG V A +VF ++ ++ +W +
Sbjct: 220 QTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTA 279
Query: 547 LISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+IS Y +GY +A + F +M + +P+ VTF+ +LSAC+HAGL +G ++K M +
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA---GLWGSLLGACRVHKNLEI 662
+ + P EH+ C+VD+LGR G L+EA+ + +D A LW ++LGAC++H+N ++
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 663 GEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN 722
G A RL LEP N +++ LSN++A +G+ +EV +R M K G S IEV+N
Sbjct: 400 GVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Query: 723 QIQCF-LSDDS 732
+ F + D+S
Sbjct: 460 KTYMFSMGDES 470
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 65/342 (19%)
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
D + A ++T Y++ G +E AR++ + +P+K A WNS+++G+ + G +A +VF M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA-WNSLVSGFEQNGLADEAIQVFYQM 199
Query: 188 PVK----DLVSYNSMLAGYTQNGKMGLA----LHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
D ++ S+L+ Q G + L + + + NV +++ + GD+
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-----PCKNVVSWNAMIAA 294
AR++F+K+ N +W M+ + HG +A LF+ M P N V++ A+++A
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 295 YAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP-----CKDIAA 349
A G ++E R VY +M +
Sbjct: 320 CAH-------------------------------AGLVEEGRSVYKRMTKSYRLIPGVEH 348
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEALDLFRQMP 405
++ L + G +DEA K +QL W +M+ G C +M DL ++
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML-GAC---KMHRNYDLGVEIA 404
Query: 406 KK------NSVSWNTMISG-YAQAGQMDSAENIFQAMEERNI 440
K+ ++ + M+S YA +G+ D +I M N+
Sbjct: 405 KRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---- 127
++++ ++K G + ARQ+FD+M ++++V+WN++++G+ N + +EA ++F M E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVF 184
D+ ++ +++ + G + + + + + L ++I Y++ G A +VF
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-----KNVVSWNLMVSGFVNSGDL 239
+ M ++ ++ +M++ Y +G A+ F KM + N V++ ++S ++G +
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 240 SSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS----WNA 290
R +++++ P V M+ R G + EA + + + W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 291 MIAAYAQ----DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
M+ A DL ++ A +L P G + N Y GK DE + + M
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPG-HHVMLSNIYALSGKTDEVSHIRDGM 441
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ S + N+ ++I+++++ G + AR++FDKM + N+ +W MI+ Y + ++A
Sbjct: 234 IISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQA 293
Query: 118 SKLFDVM-----PERDNFSWALMITCYTRKGKLEKAREL 151
+LF+ M P +N ++ +++ G +E+ R +
Sbjct: 294 VELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 254/535 (47%), Gaps = 72/535 (13%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL-----PHKDGVS 318
+A+ G I AR++FD+MP +NVVSW A+I Y Q E LF + P++ +S
Sbjct: 106 YAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLS 165
Query: 319 WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL-MSGLIQTGRVD-EASKMFNQLSTR 376
S + + GK + + C A + M G G EA +F + +
Sbjct: 166 -SVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 377 DTICWNSMIAGF--CQSGRMDEALDLFRQM--------------------------PKKN 408
+ + WNSMIA F C G+ +A+ +F +M P +
Sbjct: 225 NLVTWNSMIAAFQCCNLGK--KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 409 SVSWNTMISGYAQAGQMDSAE------NIFQAMEE---------------RNIVSWNSLI 447
S + S ++G + E ++ M E R+IV+WN +I
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII 342
Query: 448 TGFLQNSLYFDALKSLVLMGR---EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
T F +D +++ L G+ E PD TF + +H ++K
Sbjct: 343 TAFA----VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG 398
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAF 564
G++ D ++N+LI YAKCG ++ +VF ++ D++SWNS++ Y+L+G F
Sbjct: 399 GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 565 KQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGR 624
++M ++ PD TFI +LSACSHAG +GL +F+ M E P HY+C++D+L R
Sbjct: 459 QKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSR 515
Query: 625 MGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL-EPHNASNYIT 683
R EA V++ M + +A +W +LLG+CR H N +G+ AA +L EL EP N+ +YI
Sbjct: 516 AERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
+SN++ G + E M R K P SW E+ N++ F S GR RP+
Sbjct: 576 MSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS--GGRHRPD 628
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 196/419 (46%), Gaps = 61/419 (14%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+N++ N +I+++AK G I ARQ+FD M +RN+VSW +I GY+ +E LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 125 -----PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC----WNSVIAGYAK-- 173
P S +++ +C GK L KL C N+VI+ Y +
Sbjct: 154 LSHCFPNEFTLS-SVLTSCRYEPGKQVHGLAL------KLGLHCSIYVANAVISMYGRCH 206
Query: 174 -KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
+A VF + K+LV++NSM+A + A+ F +M V G
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV--------G 258
Query: 233 FVNSGDLSSARQLFEK---IPNPNA-----VSWVTMLCGFARHGKI-------------- 270
F + L+ L++ +PN + + +T+ G ++
Sbjct: 259 FDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLED 318
Query: 271 -TEARRLFDSMP-CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIIN 324
T+ +LF M C+++V+WN +I A+A + A+ LF +L + D ++S+++
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC 380
+ A ++ Q+ A+T L + LI + G +D ++F+ + +RD +
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
WNSM+ + G++D L +F++M +S ++ ++S + AG+++ IF++M E+
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 127/574 (22%), Positives = 220/574 (38%), Gaps = 153/574 (26%)
Query: 140 TRKGKLEKARELLELVPDKLESA-CWNSVIAGYAKKGQFSDAEKVFNLM---PV---KDL 192
R G + +A L P +L+S + ++ A++ D + + M P +++
Sbjct: 37 VRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNV 96
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI--- 249
+ N ++ Y + G + A F+ M E+NVVSW +++G+V +G+ LF +
Sbjct: 97 ILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH 156
Query: 250 --PNPNAVSWVTMLC----GFARHG----------------------------KITEARR 275
PN +S V C G HG EA
Sbjct: 157 CFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT 216
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW--STIINGYIRVGKLD 333
+F+++ KN+V+WN+MIAA+ +A+ +F+++ H DGV + +T++N + K
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM-HSDGVGFDRATLLNICSSLYKSS 275
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQTGRVDEA---------------SKMFNQLS-TRD 377
+ C + + T + SGL+ V A K+F ++S RD
Sbjct: 276 DLVPNEVSKCCLQLHSLT-VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRD 334
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQM-PKKNSVSW------------------------ 412
+ WN +I F + A+ LF Q+ +K S W
Sbjct: 335 IVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHA 393
Query: 413 --------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
N++I YA+ G +D +F M+ R++VSWNS++ + SL+
Sbjct: 394 QVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY---SLHGQ 450
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
L + + PD +TF AL++
Sbjct: 451 VDSILPVFQKMDINPDSATFI-----------------------------------ALLS 475
Query: 519 MYAKCGRVESAEQVFTAI-----ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+ GRVE ++F ++ L + +I + EA + KQM +
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD--- 532
Query: 574 PDQVTFIGMLSACSHAG---LANQGLDLFKCMVE 604
PD V +I +L +C G L D K +VE
Sbjct: 533 PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE 566
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 165/400 (41%), Gaps = 85/400 (21%)
Query: 54 EAVRVFSNTIHKNLVTYNSMISVF--AKNGKISDARQL--------FDKMSQRNLVS--- 100
EA VF KNLVT+NSMI+ F GK + + FD+ + N+ S
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLY 272
Query: 101 ---------------------------WNTMIAGYL---HNSMVEEASKLFDVMPE---- 126
T +A L ++ M+E+ + + + E
Sbjct: 273 KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC 332
Query: 127 RDNFSWALMITCYTRKGKLEKARELL------ELVPD-----KLESACWNSVIAGYAKKG 175
RD +W +IT + E+A L +L PD + AC V A +A
Sbjct: 333 RDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA--- 388
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
S +V + D V NS++ Y + G + L + F+ M ++VVSWN M+ +
Sbjct: 389 -LSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 236 SGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHGKITEARRLFDSM-----PCKNVVSWN 289
G + S +F+K+ NP++ +++ +L + G++ E R+F SM + +
Sbjct: 448 HGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYA 507
Query: 290 AMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWSTII-----NGYIRVGKLDEAREVYNQMP 343
+I ++ + EA ++ ++P D V W ++ +G R+GKL +
Sbjct: 508 CVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADK------- 560
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQ--LSTRDTICW 381
K++ T MS IQ + A FN+ LS ++ W
Sbjct: 561 LKELVEPTNSMS-YIQMSNIYNAEGSFNEANLSIKEMETW 599
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 19 MTSMKHKLTIGS--IGGKHVFNK--NQQIIH-LGKLGKVEEAVRVFSNTIHKNLVTYNSM 73
+ + +H L+I + I G + + N +IH K G ++ +RVF + +++V++NSM
Sbjct: 382 LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSM 441
Query: 74 ISVFAKNGKISDARQLFDKMS-QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF-- 130
+ ++ +G++ +F KM + ++ +++ H VEE ++F M E+
Sbjct: 442 LKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 131 ---SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS----DAEKV 183
+A +I +R + +A E+++ +P ++ W +++ K G A+K+
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 184 FNLMPVKDLVSYNSMLAGYTQNG 206
L+ + +SY M Y G
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEG 584
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 228/438 (52%), Gaps = 24/438 (5%)
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQ 341
C ++S +++YA ++A+ LF+++ H S++ ++ ++
Sbjct: 9 CTKLISLTKQLSSYANQGNHEQALNLFLQM-HS---SFALPLDAHVF------------S 52
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ K AA + G G V S N LS C + G C S + A LF
Sbjct: 53 LALKSCAAAFRPVLG----GSVHAHSVKSNFLSNPFVGCALLDMYGKCLS--VSHARKLF 106
Query: 402 RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITGFL-QNSLYFDA 459
++P++N+V WN MIS Y G++ A +++AM+ N S+N++I G + + A
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRA 166
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
++ M KP+ T ++ ++H Y ++ + + L+
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y +CG + + VF ++E D+++W+SLIS YAL+G A A K F++M +V PD + F
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +L ACSHAGLA++ L FK M D+ + +HYSCLVD+L R+GR EEA+ V++ M
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
K A WG+LLGACR + +E+ E AA L +EP N +NY+ L ++ GR EE ER
Sbjct: 347 EKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAER 406
Query: 700 LRVLMRDKRAGKLPGCSW 717
LR+ M++ PG SW
Sbjct: 407 LRLKMKESGVKVSPGSSW 424
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 147/336 (43%), Gaps = 57/336 (16%)
Query: 58 VFSNTIHKNLVTYN---------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
V ++H + V N +++ ++ K +S AR+LFD++ QRN V WN MI+ Y
Sbjct: 65 VLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHY 124
Query: 109 LHNSMVEEASKLF---DVMPERDNFSWALMITCYTRKGK---LEKARELLE--LVPD--- 157
H V+EA +L+ DVMP +F+ + T G +E R+++E P+
Sbjct: 125 THCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLIT 184
Query: 158 --KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
L SAC S I + + + P L S ++ Y + G + F
Sbjct: 185 LLALVSAC--SAIGAFRLIKEIHSYAFRNLIEPHPQLKS--GLVEAYGRCGSIVYVQLVF 240
Query: 216 EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
+ M +++VV+W+ ++S + GD SA + F+++ P+ ++++ +L + G
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD 300
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGK 331
EA F M Q D ++ KD +S +++ RVG+
Sbjct: 301 EALVYFKRM-------------------QGDYGLR-----ASKD--HYSCLVDVLSRVGR 334
Query: 332 LDEAREVYNQMPCKDIAAE-TALMSGLIQTGRVDEA 366
+EA +V MP K A AL+ G ++ A
Sbjct: 335 FEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 156/339 (46%), Gaps = 30/339 (8%)
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
+ F ++ Y + + AR+L + +P + + WN++I+ Y G+ +A +++ M
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQR-NAVVWNAMISHYTHCGKVKEAVELYEAM 140
Query: 188 PV-KDLVSYNSMLAGY--TQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLS 240
V + S+N+++ G T++G A+ F+ KM E N+++ +VS G
Sbjct: 141 DVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFR 199
Query: 241 SARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
+++ F + P+ ++ + R G I + +FDSM ++VV+W+++I+AYA
Sbjct: 200 LIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYA 259
Query: 297 QDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQM-------PCK 345
+ A+K F ++ D +++ ++ G DEA + +M K
Sbjct: 260 LHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASK 319
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-CWNSMIAGFCQSGRMDEALDLFRQM 404
D + L+ L + GR +EA K+ + + T W +++ G ++ A R++
Sbjct: 320 D--HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAAREL 377
Query: 405 ---PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+N ++ + Y G+ + AE + M+E +
Sbjct: 378 LMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV 416
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 146/323 (45%), Gaps = 32/323 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-QRNLVSWNTMI 105
GK V A ++F +N V +N+MIS + GK+ +A +L++ M N S+N +I
Sbjct: 94 GKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAII 153
Query: 106 AGYLHNS-----MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARE--------LL 152
G + +E K+ + + + + +++ + G +E L+
Sbjct: 154 KGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLI 213
Query: 153 ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
E P +L+S ++ Y + G + VF+ M +D+V+++S+++ Y +G AL
Sbjct: 214 EPHP-QLKSG----LVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 213 HFFEKMAEKNVVSWNL----MVSGFVNSGDLSSARQLFEKIPNPNAV-----SWVTMLCG 263
F++M V ++ ++ ++G A F+++ + + ++
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 264 FARHGKITEARRLFDSMPCKNVV-SWNAMIAA---YAQDLQIDEAVKLFIKLPHKDGVSW 319
+R G+ EA ++ +MP K +W A++ A Y + + A + + + ++ ++
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANY 388
Query: 320 STIINGYIRVGKLDEAREVYNQM 342
+ Y+ VG+ +EA + +M
Sbjct: 389 VLLGKIYMSVGRQEEAERLRLKM 411
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 185/701 (26%), Positives = 334/701 (47%), Gaps = 61/701 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----- 125
N++IS + K G +A +F +S +VS+ +I+G+ ++ EA K+F M
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDK--LESA-CWNSVIAGYAKKGQFS--DA 180
+ + +++ ++T R + ++ L+ L S NS+++ Y K S D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN---VVSWNL--MVSGFVN 235
K+F+ +P +D+ S+N++++ + GK A F +M V S+ L ++S +
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 236 SGDLSSARQLFEK---IPNPNAVSWVTMLCGF-ARHGKITEARRLFDSMPCKNVVSWNAM 291
S L R+L + I +S L GF ++ + + L++ M ++ V++ M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 292 IAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM-----PCKD 346
I AY +D AV++F + K+ ++++ ++ G+ R G +A +++ M D
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 347 IAAETAL-MSGLIQTGRVDEASKMFN-QLSTRDTICWNSMIAGFC-QSGRMDEALDLFRQ 403
+ +A+ GL+ +V E F + T C + + C + RM +A ++F Q
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 404 MPKK--NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
P +S + ++I GYA+ G D A ++F + L+ D +
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT--------------LCEQKLFLDEVS 523
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
+++ G ++G Q+H Y LK+GY +D+ + N+LI+MYA
Sbjct: 524 LTLILAVCG----------------TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYA 567
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
KC + A ++F + D+ISWNSLIS Y L EA + +M +E+ PD +T
Sbjct: 568 KCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTL 627
Query: 582 MLSA--CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
++SA + + + DLF M + IEP EHY+ V +LG G LEEA + + M
Sbjct: 628 VISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMP 687
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
V+ + +LL +CR+H N + + A + +P S YI SN+++ +G W E
Sbjct: 688 VQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEM 747
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
+R MR++ K P SWI +N+I F + D+ + + I
Sbjct: 748 IREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDI 788
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 4/202 (1%)
Query: 401 FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
F ++ ++ + N +IS Y + G A +F ++ +VS+ +LI+GF + +L +AL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 461 KSLVLMGREG-KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
K M + G +P++ TF +G Q+H I+KSG++N +FVSN+L+++
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 520 YAK--CGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM-LSEEVVPDQ 576
Y K + ++F I D+ SWN+++S G + +AF F +M E D
Sbjct: 226 YDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS 285
Query: 577 VTFIGMLSACSHAGLANQGLDL 598
T +LS+C+ + + +G +L
Sbjct: 286 FTLSTLLSSCTDSSVLLRGREL 307
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 150/347 (43%), Gaps = 47/347 (13%)
Query: 292 IAAYAQDLQIDEAVKL-FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
++A D+++ +AV F+KL + + +I+ Y+++G EA V+ + + +
Sbjct: 89 LSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSY 148
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTICWN-----SMIAGFCQSGRMDEALDLFRQMP 405
TAL+SG + EA K+F ++ + N +++ + R + + +
Sbjct: 149 TALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIV 208
Query: 406 KK---NSV-SWNTMISGYAQ--AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
K NSV N+++S Y + D +F + +R++ SWN++++ ++ A
Sbjct: 209 KSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKA 268
Query: 460 LKSLVLMGR-EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
M R EG D T G +LH ++ G + +L V+NALI
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 519 MYAK-------------------------------CGRVESAEQVFTAIECVDLISWNSL 547
Y+K G V+SA ++F + + I++N+L
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNAL 388
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
++G+ NG+ ++A K F ML V ++T + SA GL ++
Sbjct: 389 MAGFCRNGHGLKALKLFTDMLQRGV---ELTDFSLTSAVDACGLVSE 432
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 34/345 (9%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTM 104
G V+ AV +F+N KN +TYN++++ F +NG A +LF M QR + S +
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 105 I--AGYLHNSMVEEASKLFDV---MPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
+ G + V E F + AL+ C TR ++ A E+ + P L
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMC-TRCERMADAEEMFDQWPSNL 482
Query: 160 ESA-CWNSVIAGYAKKGQFSDAEKVFNLMPVK-----DLVSYNSMLA--GYTQNGKMGLA 211
+S+ S+I GYA+ G A +F+ + D VS +LA G +MG
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 212 LHFFEKMAE--KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK 269
+H + A ++ N ++S + D A ++F + + +SW +++ +
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 270 ITEARRLFDSMPCK----NVVSWNAMIAA--YAQDLQIDEAVKLFIKLPHKDGVSWST-I 322
EA L+ M K ++++ +I+A Y + ++ LF+ + + +T
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 323 INGYIRV----GKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
++RV G L+EA + N MP + E +++ L+ + R+
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMP---VQPEVSVLRALLDSCRI 704
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 185/417 (44%), Gaps = 53/417 (12%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
++ VT+ MI+ + G + A ++F ++++N +++N ++AG+ N +A KLF M
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 125 PER----DNFSWALMI-TCYTRKGKLEKARELLELVPDKLESA---CWNSVIAGYAKKGQ 176
+R +FS + C K K E + K +A C + + + +
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEK--KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 177 -FSDAEKVFNLMP--VKDLVSYNSMLAGYTQNGKMGLALHFFEK-MAEKNV----VSWNL 228
+DAE++F+ P + + S++ GY +NG A+ F + + E+ + VS L
Sbjct: 467 RMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTL 526
Query: 229 MVS-----GFVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
+++ GF G L F I N S ++M +A+ +A ++F++
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN--SLISM---YAKCCDSDDAIKIFNT 581
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIING--YIRVGKLD 333
M +V+SWN++I+ Y DEA+ L+ ++ K D ++ + +I+ Y KL
Sbjct: 582 MREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLS 641
Query: 334 EAREVYNQMPC-KDIAAETALMSGLIQT----GRVDEASKMFNQLSTRDTICWNSMIAGF 388
R+++ M DI T + ++ G ++EA N + + + S++
Sbjct: 642 SCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEV---SVLRAL 698
Query: 389 CQSGRMDEALDLFRQMPK-----KNSVSWNTMISG--YAQAGQMDSAENIFQAMEER 438
S R+ + +++ K K ++ Y+ +G +E I + M ER
Sbjct: 699 LDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRER 755
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE 571
+ NALI+ Y K G A VF ++ ++S+ +LISG++ IEA K F +M
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 572 VV-PDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+V P++ TF+ +L+AC + G+ + +V+
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVK 209
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 258/521 (49%), Gaps = 55/521 (10%)
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD 315
S ++M F+R + R++FD M ++ VS+ ++I + QD + EA+KL ++
Sbjct: 87 SLISMYAKFSRKYAV---RKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 316 GVSWSTIINGYI----RVGKLDEAREVYNQMPCKD------IAAETALMSGLIQTGRVDE 365
+ S ++ + R+G + +++ + D + TAL+ ++
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN--------------SVS 411
A +F+Q+ ++ + W +MI+G + + +DLFR M ++N V
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 412 WN--------------------------TMISGYAQAGQMDSAENIFQAMEERNIVSWNS 445
N ++ Y + G + + +F+ + R++V W+S
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
+I+G+ + + + L M +EG + + T + +H ILK G
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
+++ + + NALI MYAKCG + +A +VF + DL+SW+S+I+ Y L+G+ EA + FK
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK 443
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
M+ D + F+ +LSAC+HAGL + +F + + EHY+C ++LLGR
Sbjct: 444 GMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRF 502
Query: 626 GRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI-GEFAAMRLSELEPHNASNYITL 684
G++++AF V M +K +A +W SLL AC H L++ G+ A L + EP N +NY+ L
Sbjct: 503 GKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLL 562
Query: 685 SNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
S +H E+G + E +R +M+ ++ K G S IE + QI+
Sbjct: 563 SKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIE 603
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 194/402 (48%), Gaps = 40/402 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
+ V NS+IS++AK + R++FD+M R+ VS+ ++I + ++ EA KL M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 125 ----PERDNFSWALMITCYTRKG---KLEKARELLELVPDKLESACW--NSVIAGYAKKG 175
+ +L+ C TR G K+ + L LV ++++ + +++ Y K
Sbjct: 141 FYGFIPKSELVASLLALC-TRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL-MVSGFV 234
+ A VF+ M VK+ VS+ +M++G N + + F M +N+ + ++S
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 235 NSGDLSSARQLFEKIPNPN-----------AVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+L+ L ++I + +++TM C R G ++ +R LF++ +
Sbjct: 260 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC---RCGNVSLSRVLFETSKVR 316
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG-----VSWSTIINGYIRVGKLDEAREV 338
+VV W++MI+ YA+ E + L ++ K+G V+ I++ L A V
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQM-RKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 339 YNQ-MPC---KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
++Q + C I AL+ + G + A ++F +L+ +D + W+SMI + G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIF 432
EAL++F+ M K + +++ ++S AG ++ A+ IF
Sbjct: 436 SEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 168/392 (42%), Gaps = 61/392 (15%)
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQ 341
C VVS N++I+ YA+ + K+F ++ H+D VS+ +IIN + G L EA ++ +
Sbjct: 80 CDTVVS-NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKE 138
Query: 342 MPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
M ++ L++ L+ + G + ++MF+ L D RM E+
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE--------------RMQES 184
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+ L ++ Y + +A ++F ME +N VSW ++I+G + N Y
Sbjct: 185 VLL-----------STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYE 233
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX-XQVGNQLHEYILKSGYINDLFVSNAL 516
+ M RE +P++ T + ++H + + G D ++ A
Sbjct: 234 MGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAF 293
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MY +CG V + +F + D++ W+S+ISGYA G E QM E + +
Sbjct: 294 MTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANS 353
Query: 577 VTFIGMLSAC----------------------SHAGLANQGLDLF-KCMVEDFAIEPLAE 613
VT + ++SAC SH L N +D++ KC A E E
Sbjct: 354 VTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 614 -------HYSCLVDLLGRMGRLEEAFNVVRGM 638
+S +++ G G EA + +GM
Sbjct: 414 LTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 170/384 (44%), Gaps = 68/384 (17%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+ ++ A+ + + ++++ +++ ++ K + A +FD+M +N VSW MI+G
Sbjct: 166 KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISG 225
Query: 108 YLHNSMVEEASKLFDVM------PER-----------------------DNFSW------ 132
+ N E LF M P R FS+
Sbjct: 226 CVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHA 285
Query: 133 -----ALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM 187
A +T Y R G + +R L E + + W+S+I+GYA+ G S+ + N M
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 188 PVKDL----VSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDL 239
+ + V+ ++++ T + + A ++ + +++ N ++ + G L
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSL 404
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAY 295
S+AR++F ++ + VSW +M+ + HG +EA +F M + +++ A+++A
Sbjct: 405 SAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Query: 296 AQDLQIDEAVKLF---------IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
++EA +F + L H ++ IN R GK+D+A EV MP K
Sbjct: 465 NHAGLVEEAQTIFTQAGKYHMPVTLEH-----YACYINLLGRFGKIDDAFEVTINMPMKP 519
Query: 347 IAAE-TALMSGLIQTGRVDEASKM 369
A ++L+S GR+D A K+
Sbjct: 520 SARIWSSLLSACETHGRLDVAGKI 543
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 64/375 (17%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
NS+I+ YAK + KVF+ M +D VSY S++ Q+G + A+ ++M +
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 225 SWNLMVSGFV----NSGDLSSARQLFEKIPNPN---------AVSWVTMLCGFARHGKIT 271
+ +V+ + G S ++F + + + + V M F H
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA-- 203
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYI 327
A +FD M KN VSW AMI+ + + V LF + ++ V+ +++ +
Sbjct: 204 -AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 328 RVGKLDE-AREVYN---QMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
+ +E++ + C D A M+ + G V + +F RD + W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKK----NSVSW-------------------------- 412
SMI+G+ ++G E ++L QM K+ NSV+
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 413 ---------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
N +I YA+ G + +A +F + E+++VSW+S+I + + +AL+
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 464 VLMGREGKKPDQSTF 478
M + G + D F
Sbjct: 443 KGMIKGGHEVDDMAF 457
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G QLH LK+G D VSN+LI+MYAK R + +VF + D +S+ S+I+
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPL 611
+G EA K K+M +P +L+ C+ G +++ +F +V D ++
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE--FAAMR 669
+ LVD+ + AF+V M+VK N W +++ C ++N E+G F AM+
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMGVDLFRAMQ 243
Query: 670 LSELEPHNASNYITL 684
L P N +TL
Sbjct: 244 RENLRP----NRVTL 254
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
H+ N I K G + A VF K+LV+++SMI+ + +G S+A ++F M
Sbjct: 387 HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Query: 94 ---SQRNLVSWNTMIAGYLHNSMVEEASKLFDV-----MPERDNFSWALMITCYTRKGKL 145
+ + +++ +++ H +VEEA +F MP +A I R GK+
Sbjct: 447 KGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLE-HYACYINLLGRFGKI 505
Query: 146 EKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
+ A E+ +P K + W+S+++ G+ A K+
Sbjct: 506 DDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/549 (29%), Positives = 276/549 (50%), Gaps = 26/549 (4%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI- 249
D+ + ++++ Y + ++ AL ++M E+ + S N VSG + +G A ++F
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 250 ---PNPNAVSWVTML--CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
N+V+ ++L CG G + + V ++++ Y++ + A
Sbjct: 125 VSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVG-TSLVSMYSRCGEWVLA 183
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM---------PCKDIAAETALMS 355
++F K+PHK V+++ I+G + G ++ V+N M + A TA S
Sbjct: 184 ARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACAS 243
Query: 356 GL-IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWN 413
L +Q GR M + +T+ ++I + + A +F ++ +N +SWN
Sbjct: 244 LLNLQYGRQLHGLVMKKEFQF-ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 302
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGRE 469
++ISG GQ ++A +F+ ++ + +WNSLI+GF Q +A K M
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
P + G ++H +++K+ D+FV +LI MY KCG A
Sbjct: 363 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 422
Query: 530 EQVFTAIECV--DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
++F E D + WN +ISGY +G A + F+ + E+V P TF +LSACS
Sbjct: 423 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLW 647
H G +G +F+ M E++ +P EH C++DLLGR GRL EA V+ M +++
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY- 541
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
SLLG+CR H + +GE AAM+L+ELEP N + ++ LS+++A RWE+VE +R ++ K
Sbjct: 542 SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQK 601
Query: 708 RAGKLPGCS 716
+ KLPG S
Sbjct: 602 QLVKLPGLS 610
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 202/432 (46%), Gaps = 44/432 (10%)
Query: 47 GKLGKVEEA----VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
KLG V + +V ++ T +++S++ K +++DA ++ D+M +R + S N
Sbjct: 42 AKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVN 101
Query: 103 TMIAGYLHNSMVEEASKLF-DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---K 158
++G L N +A ++F D + + + G +E +L L +
Sbjct: 102 AAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFE 161
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+E S+++ Y++ G++ A ++F +P K +V+YN+ ++G +NG M L F M
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 219 -----AEKNVVSWNLMVSGFVNSGDLSSARQL----------FEKIPNPNAVS-WVTMLC 262
E N V++ ++ + +L RQL FE + + + C
Sbjct: 222 RKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRC 281
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVS 318
+ + TE + +N++SWN++I+ + Q + AV+LF KL + D +
Sbjct: 282 WKSAYIVFTELKD------TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSAT 335
Query: 319 WSTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQL- 373
W+++I+G+ ++GK+ EA + + +M + T+L+S + ++ +
Sbjct: 336 WNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVI 395
Query: 374 ---STRDTICWNSMIAGFCQSGRMDEALDLF-RQMPK-KNSVSWNTMISGYAQAGQMDSA 428
+ RD S+I + + G A +F R PK K+ V WN MISGY + G+ +SA
Sbjct: 396 KAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESA 455
Query: 429 ENIFQAMEERNI 440
IF+ + E +
Sbjct: 456 IEIFELLREEKV 467
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%)
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P++ TF G LH ++K+G+ D+F + AL++MY K +V A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+ + S N+ +SG NG+ +AF+ F + VT +L C
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 242/478 (50%), Gaps = 30/478 (6%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLP--HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
NA+ YA ++ A KLF ++P KD V W+T+++ + R G L + +++ +M K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 347 IAAETALMS------------GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
+ + + G Q G A KM S + +C N+++ + + G +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGH-GVAVKMGVLTSVK--VC-NALMDMYGKCGLV 162
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
E +F ++ +K+ VSW ++ + ++ +F M ERN V+W ++ G+L
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 455 LYFDALKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI------ 507
+ L+ L ++ R G + T VG +H Y LK +
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 508 -NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
+D+ V AL+ MYAKCG ++S+ VF + ++++WN+L SG A++G F Q
Sbjct: 283 YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M+ EV PD +TF +LSACSH+G+ ++G F + + +EP +HY+C+VDLLGR G
Sbjct: 343 MI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAG 400
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
+EEA ++R M V N + GSLLG+C VH +EI E L ++ P N I +SN
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
M+ GR + + LR +R + K+PG S I V + + F S D R P T +I L
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGD--RSHPRTKEIYL 516
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 50/367 (13%)
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP--ERDNFSWALMITCYTRKGKL---- 145
K + R+ +S N + Y + + A KLFD +P E+DN W +++ ++R G L
Sbjct: 38 KKAPRSYLS-NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSM 96
Query: 146 ----EKARELLELVPDKLESACWNSVIA-----GYAKKGQFSDAEKVFNLMPVKDLVSYN 196
E R+ +E+ D + C V A G+A++G A K+ L VK N
Sbjct: 97 KLFVEMRRKRVEI--DDVSVVCLFGVCAKLEDLGFAQQGH-GVAVKMGVLTSVK---VCN 150
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS 256
+++ Y + G + FE++ EK+VVSW +++ V L R++F ++P NAV+
Sbjct: 151 ALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVA 210
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
W M+ G+ G E L M + N V+ +M++A AQ
Sbjct: 211 WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ-------------- 256
Query: 312 PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
S + ++ ++ V L + + + D+ TAL+ + G +D + +F
Sbjct: 257 ------SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---PKKNSVSWNTMISGYAQAGQMDSA 428
+ R+ + WN++ +G G+ +D+F QM K + +++ ++S + +G +D
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 429 ENIFQAM 435
F ++
Sbjct: 371 WRCFHSL 377
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 176/413 (42%), Gaps = 90/413 (21%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ ++ K G +S+ +++F+++ ++++VSW ++ + +E ++F MPER+
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK 190
+W +M+ Y G RE+LEL+ AE VF
Sbjct: 210 AWTVMVAGYLGAG---FTREVLELL------------------------AEMVFRCGHGL 242
Query: 191 DLVSYNSMLAGYTQNGKM--GLALHFF---------EKMAEKNVVSWNLMVSGFVNSGDL 239
+ V+ SML+ Q+G + G +H + E+ + +V+ +V + G++
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC------KNVVSWNAMIA 293
S+ +F + N V+W + G A HGK R + D P + +++ A+++
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHGK---GRMVIDMFPQMIREVKPDDLTFTAVLS 359
Query: 294 AYAQDLQIDEAVKLFIKL------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
A + +DE + F L P D ++ +++ R G ++EA + +MP +
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVD--HYACMVDLLGRAGLIEEAEILMREMP---V 414
Query: 348 AAETALMSGLIQT----GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ L+ + G+V+ A ++ +L Q
Sbjct: 415 PPNEVVLGSLLGSCSVHGKVEIAERIKRELI----------------------------Q 446
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
M N+ M + Y G+ D A+ + ++ +R I L + ++ +S++
Sbjct: 447 MSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVH 499
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 22/257 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK G V E R+F K++V++ ++ K + R++F +M +RN V+W M+A
Sbjct: 157 GKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVA 216
Query: 107 GYLHNSMVEEASKLFDVMPERD----NF-SWALMITCYTRKGKLEKAR--ELLELVPDKL 159
GYL E +L M R NF + M++ + G L R + L + +
Sbjct: 217 GYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMM 276
Query: 160 --ESACWNSVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
E A ++ V+ G YAK G + VF LM +++V++N++ +G +GK +
Sbjct: 277 MGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMV 336
Query: 212 LHFFEKM---AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
+ F +M + + +++ ++S +SG + + F + P + M+
Sbjct: 337 IDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLL 396
Query: 265 ARHGKITEARRLFDSMP 281
R G I EA L MP
Sbjct: 397 GRAGLIEEAEILMREMP 413
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 494 GNQLHEYILKSGY--INDLFVSNALIAMYAKCGRVESAEQVFTAIECV--DLISWNSLIS 549
G +LH + SG ++SNAL YA G + +A+++F I D + W +L+S
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH---AGLANQGLDLFKCMVEDF 606
++ G + + K F +M + V D V+ + + C+ G A QG + M
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM---- 140
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFA 666
+ + + L+D+ G+ G + E + ++ K+ W +L + LE G
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVS-WTVVLDTVVKWEGLERGREV 199
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
E+ NA + + + AG EV L
Sbjct: 200 ---FHEMPERNAVAWTVMVAGYLGAGFTREVLEL 230
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 225/422 (53%), Gaps = 52/422 (12%)
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDT--ICWNSMI 385
+D V++ +P + + S L++ G + A ++F+++S RD+ WNS+I
Sbjct: 108 IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLI 167
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVS---------------------------- 411
+G+ + G+ ++A+ L+ QM P + +
Sbjct: 168 SGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFG 227
Query: 412 -----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
N ++ YA+ G + A N+F + ++ VSWNS++TG+L + L +AL LM
Sbjct: 228 YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
+ G +PD+ G QLH ++++ G +L V+NALI +Y+K G++
Sbjct: 288 VQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRGQL 344
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
A +F + D +SWN++IS ++ N K F+QM PD +TF+ +LS C
Sbjct: 345 GQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLC 401
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN-VVRGMDVKANAG 645
++ G+ G LF M +++ I+P EHY+C+V+L GR G +EEA++ +V+ M ++A
Sbjct: 402 ANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT 461
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+WG+LL AC +H N +IGE AA RL ELEP N N+ L ++++A R E+VER+R +M
Sbjct: 462 VWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMV 521
Query: 706 DK 707
D+
Sbjct: 522 DR 523
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 201/429 (46%), Gaps = 45/429 (10%)
Query: 49 LGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN--LVSWN 102
L ++ VRV + NL + ++ ++A G A ++FD+MS+R+ +WN
Sbjct: 105 LRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWN 164
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKAREL-LELVPD 157
++I+GY E+A L+ M E D F++ ++ G ++ + +LV +
Sbjct: 165 SLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 158 KLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
+ N+++ YAK G A VF+++P KD VS+NSML GY +G + AL F
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF 284
Query: 216 EKMAEKNVVSWNLMVSGFVNSG-DLSSARQLFEKIPNPNAVSWV-----TMLCGFARHGK 269
M + + + +S + RQL + + W ++ +++ G+
Sbjct: 285 RLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIR-RGMEWELSVANALIVLYSKRGQ 343
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DGVSWSTIIN 324
+ +A +FD M ++ VSWNA+I+A++++ +K F ++ H+ DG+++ ++++
Sbjct: 344 LGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQM-HRANAKPDGITFVSVLS 399
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAET-----ALMSGLI-QTGRVDEASKMFNQ---LST 375
G +++ +++ M K+ + A M L + G ++EA M Q L
Sbjct: 400 LCANTGMVEDGERLFSLM-SKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEA 458
Query: 376 RDTICWNSMIAGFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
T+ W +++ G D A LF P N ++ +I Y++A + + E +
Sbjct: 459 GPTV-WGALLYACYLHGNTDIGEVAAQRLFELEP-DNEHNFELLIRIYSKAKRAEDVERV 516
Query: 432 FQAMEERNI 440
Q M +R +
Sbjct: 517 RQMMVDRGL 525
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 40/254 (15%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLV---------TYNSMISVFAKNGKISDARQLFDKMSQRN 97
G +G V+ IH++LV N+++ ++AK G I AR +FD + ++
Sbjct: 206 GGIGSVQ-----IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKAREL 151
VSWN+M+ GYLH+ ++ EA +F +M P++ S L R + R+L
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL-----ARVLSFKHGRQL 315
Query: 152 LELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
V + E + N++I Y+K+GQ A +F+ M +D VS+N++++ +++N
Sbjct: 316 HGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN- 374
Query: 209 GLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVT 259
L +FE+M N +++ ++S N+G + +LF + +P +
Sbjct: 375 --GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYAC 432
Query: 260 MLCGFARHGKITEA 273
M+ + R G + EA
Sbjct: 433 MVNLYGRAGMMEEA 446
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 160/350 (45%), Gaps = 39/350 (11%)
Query: 133 ALMITCYTRKGKLEKARELLELVPDKL---ESACWNSVIAGYAKKGQFSDAEKVFNLMPV 189
+L+ TCY+ + ++ + L+P L + ++ YA G A +VF+ M
Sbjct: 97 SLLETCYSLRA-IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 190 KD--LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
+D ++NS+++GY + G+ A+ + +MAE V
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK----------------------- 192
Query: 248 KIPNPNAVSWVTMLCGFARHGKITEA--RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
P+ V CG +I EA R L +V NA++ YA+ I +A
Sbjct: 193 --PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 306 KLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE 365
+F +PHKD VSW++++ GY+ G L EA +++ M I + +S ++ +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK 310
Query: 366 ASKMFNQLSTRDTICW-----NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
+ + R + W N++I + + G++ +A +F QM ++++VSWN +IS ++
Sbjct: 311 HGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS 370
Query: 421 Q-AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
+ + + E + +A + + +++ S+++ + D + LM +E
Sbjct: 371 KNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 238/455 (52%), Gaps = 10/455 (2%)
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ---LSTR 376
+ ++ + +G + AR+V+++M I L G ++ E+ ++ + L R
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENI 431
D + ++ Q G L + K + ++ Y + G++ SAE +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F++M+ +++V+WN+ + +Q AL+ M + + D T
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G ++++ K ++ V NA + M+ KCG E+A +F ++ +++SW+++I GY
Sbjct: 227 EIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGY 286
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE--DFAIE 609
A+NG + EA F M +E + P+ VTF+G+LSACSHAGL N+G F MV+ D +E
Sbjct: 287 AMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLE 346
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P EHY+C+VDLLGR G LEEA+ ++ M V+ + G+WG+LLGAC VH+++ +G+ A
Sbjct: 347 PRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADV 406
Query: 670 LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS 729
L E P S ++ LSN++A AG+W+ V+++R MR K+ S +E + +I F
Sbjct: 407 LVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNR 466
Query: 730 DDSGRLRPETIQIILIGISADIRDKFNVFNMLSVF 764
D + + I L I IR V + SVF
Sbjct: 467 GDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 191/419 (45%), Gaps = 49/419 (11%)
Query: 71 NSMISVFAKN----GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA----SKLFD 122
NS+++ +N G + ARQ+FD+M + + WNT+ GY+ N + E+ K+ D
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV----IAGYAKKGQFS 178
+ D F++ ++ ++ G L V K C V + Y K G+ S
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-KYGFGCLGIVATELVMMYMKFGELS 161
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-- 236
AE +F M VKDLV++N+ LA Q G +AL +F KM V + V +++
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACG 221
Query: 237 --GDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
G L +++++ + N + L + G AR LF+ M +NVVSW+
Sbjct: 222 QLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWST 281
Query: 291 MIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQM---- 342
MI YA + EA+ LF + ++ + V++ +++ G ++E + ++ M
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 343 -----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGR--- 393
P K+ A ++ L ++G ++EA + ++ DT W +++ G C R
Sbjct: 342 DKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL-GACAVHRDMI 398
Query: 394 --MDEALDLFRQMPKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEE---RNIVSWNSL 446
A L P S++ ++S YA AG+ D + + M + + + +++S+
Sbjct: 399 LGQKVADVLVETAPDIG--SYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 58/261 (22%)
Query: 47 GKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
G+LG +E ++ I N++ N+ + + K G AR LF++M QRN+VSW+
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE---RDNF----------------------------- 130
TMI GY N EA LF M R N+
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 131 ----------SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDA 180
+A M+ R G LE+A E ++ +P + ++ W +++ A
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILG 400
Query: 181 EKVFNLM--PVKDLVSYNSMLAG-YTQNGK---MGLALHFFEKMAEKNVVSW-NLMVSG- 232
+KV +++ D+ SY+ +L+ Y GK + K+ K V ++ ++ G
Sbjct: 401 QKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGK 460
Query: 233 --FVNSGDLS--SARQLFEKI 249
F N GD S ++ ++EK+
Sbjct: 461 IHFFNRGDKSHPQSKAIYEKL 481
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 8/405 (1%)
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
AR ++ M DI ++ G + E +F ++ + N ++ +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 395 DEALDLFRQMP--------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
+AL+ RQ+ N T+I+ Y + +DSA +F + E +V +N++
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
ITG+ + + +AL M + KP++ T +G +H+Y K +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
+ V+ ALI M+AKCG ++ A +F + D +W+++I YA +G A ++ F++
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M SE V PD++TF+G+L+ACSH G +G F MV F I P +HY +VDLL R G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
LE+A+ + + + LW LL AC H NL++ E + R+ EL+ + +Y+ LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
++A +WE V+ LR +M+D++A K+PGCS IEV N + F S D
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGD 486
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
M A ++F+AM E +IV +NS+ G+ + + + V + +G PD TF
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+ G QLH +K G ++++V LI MY +C V+SA VF I ++
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
+N++I+GYA EA F++M + + P+++T + +LS+C+ G LDL K
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLG----SLDLGK-W 251
Query: 603 VEDFAIEPLAEHYSC--------LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
+ +A +H C L+D+ + G L++A ++ M K + W +++ A
Sbjct: 252 IHKYA----KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAY 306
Query: 655 RVHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
H E + F MR ++P + ++ L N + GR EE
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEIT-FLGLLNACSHTGRVEE 349
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 174/380 (45%), Gaps = 56/380 (14%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSW-ALM 135
+S AR LF+ MS+ ++V +N+M GY + E LF ++P DN+++ +L+
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP--DNYTFPSLL 136
Query: 136 ITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
C K LE+ R+L L + K D ++
Sbjct: 137 KACAVAKA-LEEGRQLHCL-----------------SMKLGLDD-----------NVYVC 167
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE----KIPN 251
+++ YT+ + A F+++ E VV +N M++G+ + A LF K
Sbjct: 168 PTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKL 307
PN ++ +++L A G + + + CK V A+I +A+ +D+AV +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 308 FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRV 363
F K+ +KD +WS +I Y GK +++ ++ +M +++ + GL+ TGRV
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 364 DEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMIS 417
+E K F+Q+ ++ I + SM+ ++G +++A + ++P + W +++
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 418 GYAQAGQMDSAENIFQAMEE 437
+ +D AE + + + E
Sbjct: 408 ACSSHNNLDLAEKVSERIFE 427
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 27/298 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ ++I+++ + + AR +FD++ + +V +N MI GY + EA LF M
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 126 ER----DNFSWALMITCYTRKGKLEKARELLELVPDKLESACW-----NSVIAGYAKKGQ 176
+ + + +++ G L+ + + + K S C ++I +AK G
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA--KKHSFCKYVKVNTALIDMFAKCGS 280
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN- 235
DA +F M KD ++++M+ Y +GK ++ FE+M +NV + G +N
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 236 ---SGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV-V 286
+G + R+ F ++ + P+ + +M+ +R G + +A D +P +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 287 SWNAMIAAYAQDLQIDEAVKL---FIKLPHKDGVSWSTIINGYIRVGK---LDEAREV 338
W ++AA + +D A K+ +L G + + N Y R K +D R+V
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 233/432 (53%), Gaps = 15/432 (3%)
Query: 315 DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
D + + ++ Y+++ +++ AR+++++M ++ + T+++SG G+ A MF ++
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 375 TRDTICWN----SMIAGFCQS---GRMDEALDLFRQMP--KKNSVSWNTMISGYAQAGQM 425
+ N + + C + R+ + + ++ ++N V ++++ Y + +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 426 DSAENIFQAM--EERNIVSWNSLITGFLQNSLYFDALKSLVLM--GREGKKPDQSTFXXX 481
++A +F +M RN+VSW S+IT + QN+ +A++ + +Q
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
Q G H + + GY ++ V+ +L+ MYAKCG + AE++F I C +
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
IS+ S+I A +G A K F +M++ + P+ VT +G+L ACSH+GL N+GL+
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG--LWGSLLGACRVHKN 659
M E + + P + HY+C+VD+LGR GR++EA+ + + ++V A G LWG+LL A R+H
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Query: 660 LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
+EI A+ RL + S YI LSN +A +G WE+ E LR+ M+ K CSWIE
Sbjct: 423 VEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Query: 720 VQNQIQCFLSDD 731
++ + F + D
Sbjct: 483 NKDSVYVFHAGD 494
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 185/432 (42%), Gaps = 85/432 (19%)
Query: 59 FSNTIH---------KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
F+N +H + T N ++ + K +I+ AR+LFD+M + N+VSW ++I+GY
Sbjct: 47 FTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 110 HNSMVEEASKLFDVMPE-----RDNFSWA-LMITCY----TRKGKLEKARELLELVPDKL 159
+ A +F M E + +++A + C +R GK AR LE+ +
Sbjct: 107 DMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHAR--LEISGLRR 164
Query: 160 ESACWNSVIAGYAKKGQFSDAEKVFNLMP--VKDLVSYNSMLAGYTQNGKMGLALHFFE- 216
+S++ Y K A +VF+ M +++VS+ SM+ Y QN + A+ F
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 217 -------------------------------KMA---------EKNVVSWNLMVSGFVNS 236
K+A E N V ++ +
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKC 284
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMI 292
G LS A ++F +I + +S+ +M+ A+HG A +LFD M N V+ ++
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVL 344
Query: 293 AAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
A + ++E ++ + K GV ++ +++ R G++DEA E+ + ++
Sbjct: 345 HACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI---EV 401
Query: 348 AAETA--LMSGLIQTGR-------VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
AE L L+ GR V EASK Q + + T + ++ + SG +++
Sbjct: 402 GAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSE 461
Query: 399 DLFRQMPKKNSV 410
L +M + +V
Sbjct: 462 SLRLEMKRSGNV 473
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
N LH LK G+ +D F N L+ Y K + +A ++F + +++SW S+ISGY
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 555 GYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G A F++M + V P++ TF + ACS + G ++ +E +
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI-HARLEISGLRRNIV 167
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGM-DVKANAGLWGSLLGA----CRVHKNLEI 662
S LVD+ G+ +E A V M N W S++ A R H+ +E+
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 174/302 (57%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
++ YA G++ A ++F+ + E ++ +WN+L+ + + + L+L R +P+
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
+ + G H Y+LK+ + FV +LI +Y+KCG + A +VF
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD 275
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ D+ +N++I G A++G+ E + +K ++S+ +VPD TF+ +SACSH+GL ++
Sbjct: 276 EMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDE 335
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL +F M + IEP EHY CLVDLLGR GRLEEA ++ M VK NA LW S LG+
Sbjct: 336 GLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSS 395
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
+ H + E GE A L LE N+ NY+ LSN++A RW +VE+ R LM+D R K PG
Sbjct: 396 QTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPG 455
Query: 715 CS 716
S
Sbjct: 456 IS 457
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 261 LCGF-ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQID---EAVKLFIKLP-HKD 315
L GF A GK+ EAR LF+ + ++ +WN ++AAYA +ID E + LF+++ +
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 316 GVSWSTIINGYIRVGKLDEA--REVY---NQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
+S +I +G+ VY N + T+L+ + G + A K+F
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG-TSLIDLYSKCGCLSFARKVF 274
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMD 426
+++S RD C+N+MI G G E ++L++ + + +S ++ IS + +G +D
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 427 SAENIFQAME 436
IF +M+
Sbjct: 335 EGLQIFNSMK 344
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 41/359 (11%)
Query: 28 IGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISD-- 85
I +IG H +++HL + A+ + + ++ YN++IS N +
Sbjct: 32 IITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTH 91
Query: 86 -ARQLFDKM--SQRNLVSWNTMIAGYL------------HNSMVEEASKLFDVMPERDNF 130
A L+D++ S+ N V N L H + F D F
Sbjct: 92 LAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRF 151
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQF-SDAEKVFNLMPV 189
A ++ Y GKL +AR L E + + + A WN+++A YA + SD E + M +
Sbjct: 152 VQAALVGFYANCGKLREARSLFERIREP-DLATWNTLLAAYANSEEIDSDEEVLLLFMRM 210
Query: 190 KDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFVNS---------GDL 239
+ + S++A +G F + A V+ NL ++ FV + G L
Sbjct: 211 QVRPNELSLVALIKSCANLG---EFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL 267
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA----MIAAY 295
S AR++F+++ + + M+ G A HG E L+ S+ + +V +A I+A
Sbjct: 268 SFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISAC 327
Query: 296 AQDLQIDEAVKLFIKLPHKDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ +DE +++F + G+ + +++ R G+L+EA E +MP K A
Sbjct: 328 SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 23/290 (7%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV---EEASKLFDVMPERD 128
+++ +A GK+ +AR LF+++ + +L +WNT++A Y ++ + EE LF M R
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 129 N-FSWALMITCYTRKGKLEK---ARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVF 184
N S +I G+ + A + L S+I Y+K G S A KVF
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLS 240
+ M +D+ YN+M+ G +G + ++ + + +V ++ + +S +SG +
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 241 SARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA 294
Q+F + P + ++ R G++ EA MP K N W + + +
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 295 YAQ--DLQIDE-AVKLFIKLPHKDGVSWSTIINGYIRVGK---LDEAREV 338
D + E A+K + L ++ ++ + N Y V + +++ RE+
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 49/254 (19%)
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
CK + + + +I G + L T+C + AL + RQ
Sbjct: 19 CKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-------------LSYALSILRQ 65
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
+P + +NT+IS +IVS ++ L SLY L S
Sbjct: 66 IPNPSVFLYNTLIS---------------------SIVSNHNSTQTHLAFSLYDQILSSR 104
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXX-XQVGNQLHEYILK--SGYINDLFVSNALIAMY 520
R P++ T+ + G LH ++LK +D FV AL+ Y
Sbjct: 105 SNFVR----PNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY 160
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI----EAFKAFKQMLSEEVVPDQ 576
A CG++ A +F I DL +WN+L++ YA N I E F +M +V P++
Sbjct: 161 ANCGKLREARSLFERIREPDLATWNTLLAAYA-NSEEIDSDEEVLLLFMRM---QVRPNE 216
Query: 577 VTFIGMLSACSHAG 590
++ + ++ +C++ G
Sbjct: 217 LSLVALIKSCANLG 230
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 143/361 (39%), Gaps = 29/361 (8%)
Query: 239 LSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE---ARRLFDSMPC-------KNVVSW 288
LS A + +IPNP+ + T++ + T+ A L+D + N ++
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 289 NAMIAAYAQDLQ-------IDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQ 341
++ A D Q + V F++ + D + ++ Y GKL EAR ++ +
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 342 MPCKDIAAETALMSGLIQTGRVD---EASKMFNQLSTR-DTICWNSMIAGFCQSGRMDEA 397
+ D+A L++ + +D E +F ++ R + + ++I G
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRG 235
Query: 398 L----DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
+ + + N ++I Y++ G + A +F M +R++ +N++I G +
Sbjct: 236 VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVH 295
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ ++ + +G PD +TF G Q+ +K+ Y + V
Sbjct: 296 GFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS-MKAVYGIEPKVE 354
Query: 514 N--ALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ L+ + + GR+E AE+ + + W S + +G A K +L
Sbjct: 355 HYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGL 414
Query: 571 E 571
E
Sbjct: 415 E 415
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 176/678 (25%), Positives = 311/678 (45%), Gaps = 100/678 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA------SKLFDVM 124
N++IS++ K G++S A ++FD+M +RN VS+NT+I GY V++A + F +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLEL-----VPDKLESACWNSVIAGYAKKGQFSD 179
P + S +++C + + L L + D C ++ Y +
Sbjct: 113 PNQSTVSG--LLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTC---LLCLYGRLDLLEM 167
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVN 235
AE+VF MP K L ++N M++ G + + FF ++ A S+ ++ G
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 236 SGDLSSARQLFEKIPNPN---AVSWV-TMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
DL ++QL +S V +++ + + G A R+F ++VSWNA+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 292 IAAYAQDLQIDEAVKLFIKLPH----------------------------------KDG- 316
I A A+ +A+KLF+ +P K+G
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 317 ----VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG---------------L 357
V + +I+ Y + G L+++R ++ + K+I AL+SG +
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQM 407
Query: 358 IQTG------------------RVDEASKMFNQLSTRDT-ICWNSMIAGFCQSGRMDEAL 398
+Q G + + + ++ D +S++ + ++ M++AL
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 399 DLFRQMPKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
L SV +++G Y++ GQ + + +E+ + VSWN I ++ +
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNAL 516
+ ++ M + +PD+ TF +G+ +H I K+ + D FV N L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I MY KCG + S +VF +LI+W +LIS ++GY EA + FK+ LS PD+
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
V+FI +L+AC H G+ +G+ LF+ M +D+ +EP +HY C VDLL R G L+EA +++R
Sbjct: 648 VSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 637 GMDVKANAGLWGSLLGAC 654
M A+A +W + L C
Sbjct: 707 EMPFPADAPVWRTFLDGC 724
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 181/423 (42%), Gaps = 46/423 (10%)
Query: 34 KHVFNKNQ----QIIHLGKLGKVEEAVRVFSNTIHKN-----LVTYNSMISVFAKNGKIS 84
+H F+ NQ ++ + L ++ R + KN +V N++I +AK G +
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 85 DARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-----PERDNFSWALMITCY 139
D+R FD + +N+V WN +++GY + S ++ P FS AL C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 140 TRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
T +L++ ++ + + +S++ YAK +DA + + V +++
Sbjct: 429 T---ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIV 485
Query: 200 AG-YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNA 254
AG Y++ G+ ++ + + + VSWN+ ++ S +LF+ + P+
Sbjct: 486 AGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDK 545
Query: 255 VSWVTM--LC--------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
++V++ LC G + HG IT+ C + N +I Y + I
Sbjct: 546 YTFVSILSLCSKLCDLTLGSSIHGLITKT-----DFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQT 360
+K+F + K+ ++W+ +I+ G EA E + + D + ++++
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 361 GRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTM 415
G V E +F ++ + + + ++G + EA L R+MP ++ W T
Sbjct: 661 GMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTF 720
Query: 416 ISG 418
+ G
Sbjct: 721 LDG 723
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
L S + ++V N +I++Y K G V A +VF + + +S+N++I GY+ G +A+
Sbjct: 41 LCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAW 100
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACS---HAGLANQGLDL-FKCMVEDFAIEPLAEHYSC 617
F +M +P+Q T G+LS S AG GL L + + D + +C
Sbjct: 101 GVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVG------TC 154
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKA 642
L+ L GR+ LE A V M K+
Sbjct: 155 LLCLYGRLDLLEMAEQVFEDMPFKS 179
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 196/336 (58%), Gaps = 4/336 (1%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV-LMGREGK 471
N +I + G+ A+ + + ++N+++WN +I G+++N Y +ALK+L ++
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
KP++ +F +H ++ SG + +S+AL+ +YAKCG + ++ +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
VF +++ D+ WN++I+G+A +G A EA + F +M +E V PD +TF+G+L+ CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+G + F M F+I+P EHY +VDLLGR GR++EA+ ++ M ++ + +W SLL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
+ R +KN E+GE A LS+ + + +Y+ LSN+++ +WE +++R LM + K
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILIGI 747
G SW+E I F + D+ + + I +L G+
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGL 434
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 19/241 (7%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN---- 251
N ++ + G+ GLA +++NV++WNLM+ G+V + A + + + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 252 -PNAVSWVTMLCGFARHGKITEAR----RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
PN S+ + L AR G + A+ + DS N + +A++ YA+ I + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GR 362
+F + D W+ +I G+ G EA V+++M + ++ ++ GL+ T G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 363 VDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMI 416
++E + F +S R +I + +M+ ++GR+ EA +L MP + + V W +++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 417 S 417
S
Sbjct: 342 S 342
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 22/244 (9%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-------DV 123
N +I K G+ A+++ S +N+++WN MI GY+ N EEA K D+
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 124 MPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDA 180
P + FS+A + R G L A+ + L+ D +L + ++++ YAK G +
Sbjct: 162 KPNK--FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS---- 236
+VF + D+ +N+M+ G+ +G A+ F +M ++V ++ G + +
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 237 GDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNA 290
G L ++ F + P + M+ R G++ EA L +SMP + +VV W +
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 291 MIAA 294
++++
Sbjct: 340 LLSS 343
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
V + NL++ + G+ A+++ + N ++W M+ G+ R+ + EA + +M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 283 -----KNVVSWNAMIAAYAQ-----------DLQIDEAVKLFIKLPHKDGVSWSTIINGY 326
N S+ + +AA A+ L ID ++L + + S +++ Y
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL-------NAILSSALVDVY 210
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWN 382
+ G + +REV+ + D++ A+++G G EA ++F+++ D+I +
Sbjct: 211 AKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFL 270
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME- 436
++ G ++E + F M ++ S+ + M+ +AG++ A + ++M
Sbjct: 271 GLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI 330
Query: 437 ERNIVSWNSLIT 448
E ++V W SL++
Sbjct: 331 EPDVVIWRSLLS 342
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 138/326 (42%), Gaps = 51/326 (15%)
Query: 134 LMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVF-NLMPVKDL 192
L+I + G+ A+++L D+ WN +I GY + Q+ +A K N++ D+
Sbjct: 103 LIIESLMKIGESGLAKKVLRNASDQ-NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 193 ----VSYNSMLAGYTQNGKMGLA--LH--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
S+ S LA + G + A +H + E N + + +V + GD+ ++R+
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
+F + + W M+ GFA HG TEA R+F M ++V
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV------------------- 262
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQ 359
D +++ ++ G L+E +E + M + + A++ L +
Sbjct: 263 --------SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 314
Query: 360 TGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGRMDEALDL----FRQMPKKNSVSWNT 414
GRV EA ++ + D + W S+++ S R + +L + + K S +
Sbjct: 315 AGRVKEAYELIESMPIEPDVVIWRSLLS----SSRTYKNPELGEIAIQNLSKAKSGDYVL 370
Query: 415 MISGYAQAGQMDSAENIFQAMEERNI 440
+ + Y+ + +SA+ + + M + I
Sbjct: 371 LSNIYSSTKKWESAQKVRELMSKEGI 396
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 42/239 (17%)
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM-------P 405
++ L++ G A K+ S ++ I WN MI G+ ++ + +EAL + M P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 406 KK---------------------------------NSVSWNTMISGYAQAGQMDSAENIF 432
K N++ + ++ YA+ G + ++ +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
+++ ++ WN++ITGF + L +A++ M E PD TF +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 493 VGNQLHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLIS 549
G + + + I L A++ + + GRV+ A ++ ++ D++ W SL+S
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 47 GKLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
+LG + A V S + I N + ++++ V+AK G I +R++F + + ++ WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLEL---- 154
MI G+ + + EA ++F M D+ ++ ++T + G LE+ +E L
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 155 --VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLA 200
+ KLE + +++ + G+ +A ++ MP++ D+V + S+L+
Sbjct: 296 FSIQPKLEH--YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 209/413 (50%), Gaps = 39/413 (9%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
DI + +L+ G A K+F ++ RD + W +I GF ++G EALD F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 406 --------------------------------KKNSV----SWNTMISGYAQAGQMDSAE 429
K+ S+ + N +I Y + Q+ A
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM-GREGKKPDQSTFXXXXXXXXXX 488
+F +E+++ VSWNS+I+G + +A+ LM G KPD
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
G +HEYIL +G D + A++ MYAKCG +E+A ++F I ++ +WN+L+
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALL 379
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM-VEDFA 607
G A++G+ +E+ + F++M+ P+ VTF+ L+AC H GL ++G F M ++
Sbjct: 380 GGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN 439
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL-EIGEFA 666
+ P EHY C++DLL R G L+EA +V+ M VK + + G++L AC+ L E+ +
Sbjct: 440 LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEI 499
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
++E ++ Y+ LSN+ A RW++V R+R LM+ K K+PG S+IE
Sbjct: 500 LDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 48/367 (13%)
Query: 64 HKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDV 123
+ ++ NS++ + G+ +A ++F +M R++VSW +I G+ + +EA F
Sbjct: 138 YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK 197
Query: 124 MPERDNF-SWALMITCYTRKGKLEKARELLELVPDK-----LESACWNSVIAGYAKKGQF 177
M N ++ ++ R G L + + L+ + LE+ N++I Y K Q
Sbjct: 198 MDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG--NALIDMYVKCEQL 255
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS-----WNLMVSG 232
SDA +VF + KD VS+NSM++G + A+ F M + + ++S
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARRLFDSMPCKNVVS 287
+ G + R + E I + W T + +A+ G I A +F+ + KNV +
Sbjct: 316 CASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 288 WNAMIAAYAQDLQIDEAVKLF---IKLPHKDG-VSWSTIINGYIRVGKLDEAREVYNQMP 343
WNA++ A E+++ F +KL K V++ +N G +DE R +++M
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK 434
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ +F +L + MI C++G +DEAL+L +
Sbjct: 435 SREY--------------------NLFPKLEH-----YGCMIDLLCRAGLLDEALELVKA 469
Query: 404 MPKKNSV 410
MP K V
Sbjct: 470 MPVKPDV 476
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 141/294 (47%), Gaps = 22/294 (7%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNV 223
NS++ Y G+ +A KVF MPV+D+VS+ ++ G+T+ G AL F KM E N+
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNL 204
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG------FARHGKITEARRLF 277
++ ++ G LS + + I S +++ G + + ++++A R+F
Sbjct: 205 ATYVCVLVSSGRVGCLSLGKGIHGLI--LKRASLISLETGNALIDMYVKCEQLSDAMRVF 262
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----WSTIINGYIRVGKL 332
+ K+ VSWN+MI+ + EA+ LF + G+ +++++ +G +
Sbjct: 263 GELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAV 322
Query: 333 DEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
D R V+ + I +T + + ++ + G ++ A ++FN + +++ WN+++ G
Sbjct: 323 DHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGL 382
Query: 389 CQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
G E+L F +M K N V++ ++ G +D F M+ R
Sbjct: 383 AIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 138/312 (44%), Gaps = 61/312 (19%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+L T N++I ++ K ++SDA ++F ++ +++ VSWN+MI+G +H +EA LF +M
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 126 -----ERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQF 177
+ D +++ G ++ R + E + K ++ +++ YAK G
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
A ++FN + K++ ++N++L G +G +L +FE+M + GF
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL----------GF---- 403
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
PN V+++ L G + E RR F M + +N
Sbjct: 404 -------------KPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE---YN-------- 439
Query: 298 DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSG 356
LF KL H + +I+ R G LDEA E+ MP K D+ A++S
Sbjct: 440 ---------LFPKLEH-----YGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 357 LIQTGRVDEASK 368
G + E K
Sbjct: 486 CKNRGTLMELPK 497
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 24/266 (9%)
Query: 442 SWNSLITGFL---QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
S+N+L++ + + + A K+ V G PD TF + G Q+H
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFV---SNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
+ K G+ +D++V N+L+ Y CG +A +VF + D++SW +I+G+ G
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA F +M +V P+ T++ +L + G + G + +++ ++ L E + L
Sbjct: 190 EALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL-ETGNAL 245
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSE-LEP 675
+D+ + +L +A V ++ K W S++ G ++ E I F+ M+ S ++P
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVS-WNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 676 HNASNYITLSNMHAEA-------GRW 694
+I S + A A GRW
Sbjct: 305 ---DGHILTSVLSACASLGAVDHGRW 327
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K G +E A+ +F+ KN+ T+N+++ A +G ++ + F++M + NLV++
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFL 411
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERD-NF-----SWALMITCYTRKGKLEKARELLELVP 156
+ H +V+E + F M R+ N + MI R G L++A EL++ +P
Sbjct: 412 AALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP 471
Query: 157 DKLESACWNSVIAGYAKKGQFSDAEK 182
K + ++++ +G + K
Sbjct: 472 VKPDVRICGAILSACKNRGTLMELPK 497
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 178/704 (25%), Positives = 312/704 (44%), Gaps = 89/704 (12%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRV-FSNTIHKNLVTYNSMISVFAKNGK 82
HK IG+ G K +QI+ + G V +AV V F++ + Y + +
Sbjct: 20 HKRVIGT-GTK--LTVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKAL 76
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRK 142
+ AR++ Q +LV+++ + +L N +E Y +
Sbjct: 77 VVQARKV-----QSHLVTFSPLPPIFLLNRAIEA----------------------YGKC 109
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGY 202
G ++ AREL E +P++ + WN+VI A+ G + ++F M + + + AG
Sbjct: 110 GCVDDARELFEEMPER-DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGV 168
Query: 203 TQNGKMGLALHFFEKMA--------EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA 254
++ + L L ++ NV +V + +S AR++F++I NP+
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD 228
Query: 255 VSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVK-L 307
VSW ++ + G EA +F M P + VS + + + L++ + + +
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 308 FIKLPH-KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEA 366
+KL D V +++ + Y++ +L+ AR V++Q KD+ + T+ MSG +G EA
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD--------------------------- 399
++F+ + R+ + WN+M+ G+ + DEALD
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 400 ------------LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE-RNIVSWNSL 446
++R N + N ++ Y + G + SA F+ M E R+ VSWN+L
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
+TG + AL M E K P + T +G +H ++++ GY
Sbjct: 469 LTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
D+ + A++ MY+KC + A +VF DLI WNS+I G NG + E F+ F
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+ +E V PD VTF+G+L AC G G F M + I P EHY C+++L + G
Sbjct: 588 LENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL 670
L + + M + + AC+ ++ ++G +AA RL
Sbjct: 648 CLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 5/347 (1%)
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
D N++I + +D AL LF + P+++ V++N +I G +A ++ A +F +M
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
R++VSWNSLI+G+ Q + +A+K M G KPD Q G
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H+Y + D F++ L+ YAKCG +++A ++F L +WN++I+G A++G
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
F++M+S + PD VTFI +L CSH+GL ++ +LF M + + +HY
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYG 390
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDV----KANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
C+ DLLGR G +EEA ++ M + W LLG CR+H N+EI E AA R+
Sbjct: 391 CMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLR-VLMRDKRAGKLPGCSWI 718
L P + Y + M+A A RWEEV ++R ++ RDK+ K G S +
Sbjct: 451 LSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 46/325 (14%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
+F N I + ++ A+++F +++VTYN +I K +I AR+LFD M
Sbjct: 152 LFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPL 211
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL 151
R+LVSWN++I+GY + EA KLFD M + DN + ++ + G +K + +
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 152 LELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
+ K ++S ++ YAK G A ++F L K L ++N+M+ G +G
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 209 GLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
L + +F KM + P+ V+++++L G + G
Sbjct: 332 ELTVDYFRKMVSSGI---------------------------KPDGVTFISVLVGCSHSG 364
Query: 269 KITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG------V 317
+ EAR LFD M + + + M + I+EA ++ ++P KDG +
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP-KDGGNREKLL 423
Query: 318 SWSTIINGYIRVGKLDEAREVYNQM 342
+WS ++ G G ++ A + N++
Sbjct: 424 AWSGLLGGCRIHGNIEIAEKAANRV 448
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 35/256 (13%)
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
+ DL + N+++ Y+ + AL F++ +++VV++N+++ G V + ++ AR+LF+
Sbjct: 149 LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+P + VSW +++ G+A+ EA +LFD M V L
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEM------------------------VALG 244
Query: 309 IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVD 364
+K D V+ + ++ + G + + +++ K + ++ L +GL+ + G +D
Sbjct: 245 LK---PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYA 420
A ++F S + WN+MI G G + +D FR+M K + V++ +++ G +
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 421 QAGQMDSAENIFQAME 436
+G +D A N+F M
Sbjct: 362 HSGLVDEARNLFDQMR 377
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 156/383 (40%), Gaps = 69/383 (18%)
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWN-----TMISGYAQAGQ--MDSAENIFQAMEER 438
A F SGR+ K+NSV N T IS A A + + A ++F+ +
Sbjct: 25 AQFITSGRISNDF-------KQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNP 77
Query: 439 NIVSWNSLI-TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG--N 495
+ +N++I L + + V M R PD TF +
Sbjct: 78 STFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVK 137
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-------------------TAI 536
LH L+ G ++DLF N LI +Y+ ++SA Q+F A
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAR 197
Query: 537 ECV------------DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
E V DL+SWNSLISGYA + EA K F +M++ + PD V + LS
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 585 ACSHAGLANQGLDLF------KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
AC+ +G +G + + ++ F LA + LVD + G ++ A +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSF----LA---TGLVDFYAKCGFIDTAMEIFELC 310
Query: 639 DVKANAGLWGSLLGACRVHKN--LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
K W +++ +H N L + F M S ++P + +I++ + +G +E
Sbjct: 311 SDK-TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP-DGVTFISVLVGCSHSGLVDE 368
Query: 697 V----ERLRVLMRDKRAGKLPGC 715
+++R L R K GC
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGC 391
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 213/434 (49%), Gaps = 57/434 (13%)
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQS-GRMDEALDLFRQM-------PKKNSVSW-- 412
V+ A ++F+ + + WN++I R +EA L+R+M P K++ +
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 413 -------------------------------NTMISGYAQAGQMDSAENIFQAMEERNIV 441
N +I Y G +D A +F M ER++V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SWNS+I ++ Y AL+ M R + PD T +G H ++
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 502 LKSGYIN---DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
L+ ++ D+ V N+LI MY KCG + AEQVF ++ DL SWN++I G+A +G A
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 559 EAFKAFKQMLS--EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
EA F +M+ E V P+ VTF+G+L AC+H G N+G F MV D+ IEP EHY
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA-CRVHKNLEIGEFAAMRLSELEP 675
C+VDL+ R G + EA ++V M +K +A +W SLL A C+ ++E+ E A + +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKE 457
Query: 676 HNASN-------YITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
N S+ Y+ LS ++A A RW +V +R LM + K PGCS IE+ F
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFF 517
Query: 729 SDDSGRLRPETIQI 742
+ D+ P+T QI
Sbjct: 518 AGDTS--HPQTKQI 529
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 40/282 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP---ER 127
N +I ++ G + AR++FD+M +R+LVSWN+MI + + A +LF M E
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP 249
Query: 128 DNFSWALMITCYTRKGKLEK---ARELLELVPD---KLESACWNSVIAGYAKKGQFSDAE 181
D ++ +++ G L A L D ++ NS+I Y K G AE
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+VF M +DL S+N+M+ G+ +G+ A++FF++M +K
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR------------------- 350
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----WNAMIAAYA 296
E + PN+V++V +L G + + R+ FD M + + ++ A
Sbjct: 351 -----ENV-RPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 297 QDLQIDEAVKLFIKLPHK-DGVSWSTIINGYIRVGKLDEARE 337
+ I EA+ + + +P K D V W ++++ + G E E
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 168/387 (43%), Gaps = 58/387 (14%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN-SMVEEASKLFDVM 124
L Y ++ + + ++ A ++FD + + WNT+I H+ S EEA L+ M
Sbjct: 82 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKM 141
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVF 184
ER S PDK + V+ A FS+ ++V
Sbjct: 142 LERGESS------------------------PDK---HTFPFVLKACAYIFGFSEGKQV- 173
Query: 185 NLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
+ VK D+ N ++ Y G + LA F++M E+++VSWN M+ V G+
Sbjct: 174 HCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEY 233
Query: 240 SSARQLFEKIPN---PNAVSWVTMLCGFARHGKITEAR-------RLFDSMPCKNVVSWN 289
SA QLF ++ P+ + ++L A G ++ R D +V+ N
Sbjct: 234 DSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN 293
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK--DI 347
++I Y + + A ++F + +D SW+ +I G+ G+ +EA +++M K ++
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV 353
Query: 348 AAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC------WNSMIAGFCQSGRMDEA 397
+ GL+ G V++ + F+ + RD + ++ ++G + EA
Sbjct: 354 RPNSVTFVGLLIACNHRGFVNKGRQYFDMM-VRDYCIEPALEHYGCIVDLIARAGYITEA 412
Query: 398 LDLFRQMP-KKNSVSWNTMISGYAQAG 423
+D+ MP K ++V W +++ + G
Sbjct: 413 IDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 66/310 (21%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH---KDGVSWSTIIN 324
G + AR++FD MP +++VSWN+MI A + + D A++LF ++ DG + ++++
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLS 259
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+G L + T + L++ VD A D + NS+
Sbjct: 260 ACAGLGSL---------------SLGTWAHAFLLRKCDVDVA---------MDVLVKNSL 295
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
I +C+ G + A +F+ M K++ SWN MI G+A G+ + A N F M ++
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK------ 349
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
RE +P+ TF G Q + +++
Sbjct: 350 -----------------------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 505 GYIND-LFVSNALIAMYAKCGRV-ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
I L ++ + A+ G + E+ + V + D + W SL+ G ++E
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE--- 443
Query: 563 AFKQMLSEEV 572
LSEE+
Sbjct: 444 -----LSEEI 448
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
V KN I K G + A +VF ++L ++N+MI FA +G+ +A FD+M
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 96 R------NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL-----MITCYTRKGK 144
+ N V++ ++ H V + + FD+M AL ++ R G
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 145 LEKARELLELVPDKLESACWNSVIAGYAKKG 175
+ +A +++ +P K ++ W S++ KKG
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 216 bits (550), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 260/544 (47%), Gaps = 47/544 (8%)
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
+ SG + +A QLF+ IP+ N ++W L G ++G + A LFD MP ++VVSWN MI
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 293 AAYAQDLQIDEAVKLFIKL------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
+ + +++F + P + S + +R G+ + + + +
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 168
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF---RQ 403
+ ++M + G D A +F + RD + WN +I SG + ALD F R+
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 404 M---PKKNSVSW----------------------------NTMISG-----YAQAGQMDS 427
M P + +VS N+++ G +++ ++D
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
+ +F+ +E+ + V NS+I + + DAL+ +L + +PD+ TF
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
G +H ++K G+ D V+ +L+ MY K G V+ A VF + DLI WN++
Sbjct: 349 VMLDH-GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 548 ISGYALNGYAIEAFKAFKQML-SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
I G A N A+E+ F Q+L ++ + PD+VT +G+L AC +AG N+G+ +F M +
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 467
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFA 666
+ P EHY+C+++LL R+G + EA ++ + + ++ +W +L A + + E
Sbjct: 468 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 527
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQC 726
A + E EP ++ Y+ L ++ RWE +LR M + + G S I +++ +
Sbjct: 528 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 587
Query: 727 FLSD 730
F +D
Sbjct: 588 FEAD 591
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 205/418 (49%), Gaps = 31/418 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G V A+++F + KN +T+N + KNG +++A LFD+M +R++VSWNTMI+G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 108 YLHNSMVEEASKLF------DVMPERDNFS-WALMITCYTRKGKLEKARELLELVPDKLE 160
+ E ++F ++ P FS A ++TC R G+ + V +
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC-VRHGEQIHGNAICSGV-SRYN 168
Query: 161 SACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
WNSV+ Y + G F A VF M +D+VS+N ++ + +G +AL F M E
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 221 KNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG----FARHGKITE 272
+ + +++VS + +LS +Q +S +L F++ ++ +
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI----KLPHKDGVSWSTIINGYIR 328
+ +LF + + V N+MI +Y+ ++A++LFI + D ++S++++
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 329 VGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
V LD +V++ + D A T+LM +TG VD A +F + +D I WN++
Sbjct: 349 V-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 385 IAGFCQSGRMDEALDLFRQM-----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
I G ++ R E+L +F Q+ K + V+ ++ AG ++ IF +ME+
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEK 465
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQA 434
R T N + + +SG + AL LF +P KN+++WN + G + G +++A ++F
Sbjct: 36 VRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDE 95
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG 494
M ER++VSWN++I+G + + ++ M R +P + TF + G
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF---SILASLVTCVRHG 152
Query: 495 NQLHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
Q+H + SG +L V N+++ MY + G + A VF +E D++SWN LI +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSD 212
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD-LFKCMVEDFAIEPLA 612
+G A F M E+ PD+ T ++S CS ++G L C+ F +
Sbjct: 213 SGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV 272
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
+D+ + RL+++ + R ++ K ++ L S++G+ H
Sbjct: 273 --LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 39/213 (18%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H +L++G++ + N + +Y K G V +A Q+F I + I+WN + G NGY
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM------VEDFAIEP 610
A F +M +VV G++S G G+ +F M +F
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVS----CGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 611 LAEHYSC--------------------------LVDLLGRMGRLEEAFNVVRGMDVKANA 644
LA +C ++D+ R+G + A +V M+ + +
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR-DV 200
Query: 645 GLWGSLLGACRVHKNLEIG--EFAAMRLSELEP 675
W L+ +C N E+ +F MR E++P
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQP 233
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 244/486 (50%), Gaps = 35/486 (7%)
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIA 293
D+ A +FE + N N + TM+ G++ + A +F+ + K + S+ +
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 294 AYAQDLQIDEAVKLFIKLPHKDGVSWST-----IINGYIRVGKLDEAREVYNQMP-CKDI 347
+ +++L + L + + G T +I+ Y GK+ +AR+V+++MP D
Sbjct: 134 SCSRELCVSIGEGLH-GIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS----GRMDEA------ 397
+ LM+G +Q + A +F + + + S + F + G + A
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVL 252
Query: 398 -----LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQ 452
LDL + +I Y + G + SA IF +++V+WN +I + +
Sbjct: 253 CIKIGLDLDLHL-------ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAK 305
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
L + + L M E KP+ STF VG + + + + D +
Sbjct: 306 TGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAIL 365
Query: 513 SNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-- 570
AL+ MYAK G +E A ++F ++ D+ SW ++ISGY +G A EA F +M E
Sbjct: 366 GTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENC 425
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
+V P+++TF+ +L+ACSH GL +G+ FK MVE ++ P EHY C+VDLLGR G+LEE
Sbjct: 426 KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEE 485
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAE 690
A+ ++R + + +++ W +LL ACRV+ N ++GE MRL+E+ + ++ I L+ HA
Sbjct: 486 AYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAV 545
Query: 691 AGRWEE 696
AG E+
Sbjct: 546 AGNPEK 551
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 178/370 (48%), Gaps = 42/370 (11%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---- 127
S + F+ I A +F+ +S NL +NTMI GY + E A +F+ + +
Sbjct: 64 SKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL 123
Query: 128 DNFSWALMI-TCYTRKGKLEKARELLELVPDKLESACW-----------NSVIAGYAKKG 175
D FS+ + +C +REL + + L N++I Y G
Sbjct: 124 DRFSFITTLKSC---------SRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCG 174
Query: 176 QFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMV 230
+ SDA KVF+ MP D V++++++ GY Q K LAL F M + VV + +
Sbjct: 175 KISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 231 SGFVNSGDLS---SARQLFEKIPNPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVV 286
S + GDLS SA L KI + +T L G + + G I+ ARR+FD K+VV
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVV 294
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEA----REVYNQM 342
+WN MI YA+ ++E V L ++ ++ S+ G + EA R V + +
Sbjct: 295 TWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLL 354
Query: 343 PCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
+ IA + L + L+ + G +++A ++FN++ +D W +MI+G+ G EA+
Sbjct: 355 EEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAV 414
Query: 399 DLFRQMPKKN 408
LF +M ++N
Sbjct: 415 TLFNKMEEEN 424
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 185/392 (47%), Gaps = 53/392 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQR-NLVSWNTMIAGYLHNSMVEEASKLFDVMPERD- 128
N++I + GKISDAR++FD+M Q + V+++T++ GYL S A LF +M + +
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 129 --NFSWAL-MITCYTRKGKL---EKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEK 182
N S L ++ + G L E A L + L+ ++I Y K G S A +
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
+F+ KD+V++N M+ Y + G + E+ V W L
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTG-----------LLEECV--WLL-------------- 316
Query: 243 RQL-FEKIPNPNAVSWVTML--CGFARHGKI--TEARRLFDSMPCKNVVSWNAMIAAYAQ 297
RQ+ +EK+ PN+ ++V +L C ++ + T A L + + + A++ YA+
Sbjct: 317 RQMKYEKM-KPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAK 375
Query: 298 DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMP---CKDIAAETA-- 352
+++AV++F ++ KD SW+ +I+GY G EA ++N+M CK E
Sbjct: 376 VGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFL 435
Query: 353 -LMSGLIQTGRVDEASKMFNQLS-----TRDTICWNSMIAGFCQSGRMDEALDLFRQMP- 405
+++ G V E + F ++ T + ++ ++G+++EA +L R +P
Sbjct: 436 VVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+S +W +++ G D E++ + E
Sbjct: 496 TSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 43 IIHLGKLGKVEEA-VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
I LG L E A V + +L ++I ++ K G IS AR++FD ++++V+W
Sbjct: 237 ISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTW 296
Query: 102 NTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKA-RELLEL 154
N MI Y ++EE L M P F L Y+ + + +LLE
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
L++ +++ YAK G A ++FN M KD+ S+ +M++GY +G A+
Sbjct: 357 ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 215 FEKMAEKNV------VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCG 263
F KM E+N +++ ++++ + G + + F+++ P + ++
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 264 FARHGKITEARRLFDSMP-CKNVVSWNAMIAA 294
R G++ EA L ++P + +W A++AA
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL------VS 100
K+G +E+AV +F+ K++ ++ +MIS + +G +A LF+KM + N ++
Sbjct: 374 AKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEIT 433
Query: 101 WNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELV 155
+ ++ H +V E + F M E +F+ + ++ R G+LE+A EL+ +
Sbjct: 434 FLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNL 493
Query: 156 PDKLESACWNSVIAGYAKKGQFSDAEKV 183
P +S W +++A G E V
Sbjct: 494 PITSDSTAWRALLAACRVYGNADLGESV 521
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
+++H Y++K+G D F + L+A ++ + A +F + +L +N++I GY+++
Sbjct: 45 SRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA-----GLANQGLDLFKCMVEDFAIE 609
AF F Q+ ++ + D+ +FI L +CS G G+ L + +
Sbjct: 104 DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR 163
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKN-LEIGEFAA 667
H+ C+ G++ +A V M +A + +L+ G +V K L + F
Sbjct: 164 NALIHFYCVC------GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRI 217
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
MR SE+ N S ++ + ++ G E VL
Sbjct: 218 MRKSEVVV-NVSTLLSFLSAISDLGDLSGAESAHVL 252
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 189/346 (54%), Gaps = 13/346 (3%)
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
+++ + G M +A +F +MP++N V+WN MI+G G + A + M R +V
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 442 SWNSLITGFLQNSLYFDALKSLVLM-----GREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
SW ++I G+ + D K +L+ + KP++ T ++
Sbjct: 222 SWTTIIDGYAR----VDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 497 LHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIEC--VDLISWNSLISGYAL 553
+H Y+ K G++ D+ V+N+LI YAKCG ++SA + F I +L+SW ++IS +A+
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG-LDLFKCMVEDFAIEPLA 612
+G EA FK M + P++VT I +L+ACSH GLA + L+ F MV ++ I P
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
+HY CLVD+L R GRLEEA + + ++ A +W LLGAC V+ + E+ E +L E
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
LE + +Y+ +SN+ GR+ + +R R M + KLPG S +
Sbjct: 458 LERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 56/297 (18%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAV 255
+++ Y G M A F++M E+N V+WN+M++G N GD A EK+PN V
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 256 SWVTMLCGFARHGKITEARRLFDSM----------------------------------- 280
SW T++ G+AR K EA LF M
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 281 -------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH--KDGVSWSTIINGYIRVGK 331
PC V+ N++I AYA+ I A K FI++P+ K+ VSW+T+I+ + G
Sbjct: 282 VGKRGFVPCDIRVT-NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGM 340
Query: 332 LDEAREVYNQMPCKDIAAETALM---------SGLIQTGRVDEASKMFNQLS-TRDTICW 381
EA ++ M + M GL + ++ + M N+ T D +
Sbjct: 341 GKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHY 400
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
++ + GR++EA + ++P ++ +V W ++ + + AE + + + E
Sbjct: 401 GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 49/343 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+++ ++ G + DA ++FD+M +RN V+WN MI G + E+A + MP R
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 131 SWALMITCYTRKGKLEKARELLE-------LVPDKLE-----SACWN--------SVIAG 170
SW +I Y R K ++A L + P+++ A WN SV A
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM--AEKNVVSWNL 228
K+G +P D+ NS++ Y + G + A FF ++ KN+VSW
Sbjct: 282 VGKRG----------FVPC-DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRL--FDSMP- 281
M+S F G A +F+ + PN V+ +++L HG + E L F++M
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA-CSHGGLAEEEFLEFFNTMVN 389
Query: 282 ----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-HKDGVSWSTIINGYIRVGKLDEAR 336
+V + ++ + +++EA K+ +++P + V W ++ + A
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 337 EVYNQMP--CKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR 376
V ++ + + LMS + TGR +A + Q+ R
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
E +V +V ++ G++ A ++F+++P N V+W M+ G G +A +
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWS-----TIINGYIRVGKLDE 334
MP + VVSW +I YA+ + EA+ LF ++ D + + I+ +G L
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 335 AREVYNQ------MPCKDIAAETALMSGLIQTGRVDEASKMFNQLST--RDTICWNSMIA 386
V+ +PC DI +L+ + G + A K F ++ ++ + W +MI+
Sbjct: 275 CGSVHAYVGKRGFVPC-DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMIS 333
Query: 387 GFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAG 423
F G EA+ +F+ M K N V+ ++++ + G
Sbjct: 334 AFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 229/447 (51%), Gaps = 34/447 (7%)
Query: 301 IDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSG 356
++ A +F + ++T+I GY+ V +EA YN+M + D L+
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 357 LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
+ + E ++ Q+ ++ D+F Q N++I
Sbjct: 142 CTRLKSIREGKQIHGQVF------------------KLGLEADVFVQ---------NSLI 174
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQ 475
+ Y + G+M+ + +F+ +E + SW+S+++ ++ + L M E K ++
Sbjct: 175 NMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEE 234
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA 535
S +G +H ++L++ ++ V +L+ MY KCG ++ A +F
Sbjct: 235 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 294
Query: 536 IECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG 595
+E + ++++++ISG AL+G A + F +M+ E + PD V ++ +L+ACSH+GL +G
Sbjct: 295 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 596 LDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACR 655
+F M+++ +EP AEHY CLVDLLGR G LEEA ++ + ++ N +W + L CR
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 414
Query: 656 VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGC 715
V +N+E+G+ AA L +L HN +Y+ +SN++++ W++V R R + K + PG
Sbjct: 415 VRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGF 474
Query: 716 SWIEVQNQIQCFLSDDSGRLRPETIQI 742
S +E++ + F+S D R P+ +I
Sbjct: 475 SIVELKGKTHRFVSQD--RSHPKCKEI 499
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 163/353 (46%), Gaps = 47/353 (13%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTR 141
A +F + +NTMI GY++ EEA ++ M +R DNF++ ++ TR
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 142 KGKLEKARELL-ELVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
+ + +++ ++ LE+ + NS+I Y + G+ + VF + K S++SM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 199 LAGYTQNGKMGLALHFFEKM-AEKNV-VSWNLMVSGFV---NSGDLSSARQ----LFEKI 249
++ G L F M +E N+ + MVS + N+G L+ L I
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
N + +++ + + G + +A +F M +N ++++AMI+ A + + A+++F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 310 KLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE 365
K+ + D V + +++N G + E R V+ +M ++ G+V+
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM---------------LKEGKVEP 369
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMIS 417
++ + C ++ ++G ++EAL+ + +P +KN V W T +S
Sbjct: 370 TAEHYG--------CLVDLLG---RAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 151/355 (42%), Gaps = 38/355 (10%)
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIPNPNAVSWVTMLCG 263
M A F + + +N M+ G+VN A ++ ++ P+ ++ +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 264 FARHGKITEARRL----FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW 319
R I E +++ F +V N++I Y + +++ + +F KL K SW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
S++++ +G E ++ M +ET L + +E+ + L+ +T
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGM-----CSETNL--------KAEESGMVSALLACANTG 248
Query: 380 CWN--SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
N I GF L R + + N + +++ Y + G +D A +IFQ ME+
Sbjct: 249 ALNLGMSIHGF-----------LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
RN ++++++I+G + AL+ M +EG +PD + + G ++
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 498 HEYILKSGYINDLFVS-NALIAMYAKCGRVESAEQVFTA--IECVDLISWNSLIS 549
+LK G + L+ + + G +E A + + IE D+I W + +S
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLS 411
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 33/278 (11%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+VF + ++ NS+I+++ + G++ + +F+K+ + SW++M++ M E
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQ 176
LF M N K E++ + L+ AC N+ G G
Sbjct: 217 CLLLFRGMCSETNL-------------KAEESGMVSALL------ACANT---GALNLGM 254
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS 236
+ N+ + +++ S++ Y + G + ALH F+KM ++N ++++ M+SG
Sbjct: 255 SIHGFLLRNISEL-NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 237 GDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
G+ SA ++F K+ P+ V +V++L + G + E RR+F M + V A
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 293 AAYAQDL-----QIDEAVKLFIKLP-HKDGVSWSTIIN 324
DL ++EA++ +P K+ V W T ++
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 257/513 (50%), Gaps = 60/513 (11%)
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PH 313
+ + C F R+ T A LFD +P +++ S N+ ++++ + ++ + LF+++ P
Sbjct: 23 LVLRCVFIRNFA-THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPD 81
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGRVDEASKM 369
+++ ++ + + R+V+ Q ++TAL+ + G + ++ ++
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS-------------------- 409
F + +D + WN++++GF ++G+ EAL +F M ++
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKIL 201
Query: 410 ------------------VSWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITGF 450
V MIS Y+ G ++ A ++ ++ + V NSLI+G
Sbjct: 202 QQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
++N Y +A +LM R+ +P+ +G Q+H L++G+++D
Sbjct: 262 IRNRNYKEAF---LLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS 316
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ N L+ MY KCG++ A +F AI ++SW S+I YA+NG ++A + F++M E
Sbjct: 317 KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376
Query: 571 --EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
V+P+ VTF+ ++SAC+HAGL +G + F M E + + P EHY C +D+L + G
Sbjct: 377 GSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGET 436
Query: 629 EEAFNVVRGMDVKAN----AGLWGSLLGACRVHKNLEIGEFAAMRL-SELEPHNASNYIT 683
EE + +V M N +W ++L AC ++ +L GE+ A RL E P NAS Y+
Sbjct: 437 EEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVL 496
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
+SN +A G+W+ VE LR +++K K G S
Sbjct: 497 VSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 154/294 (52%), Gaps = 22/294 (7%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM--- 124
++ ++I +++K G + D+ ++F+ + +++LVSWN +++G+L N +EA +F M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 125 -PERDNFSWALMI-TCYTRKGKLEKAREL--LELVPDKLESACWNSVIAGYAKKGQFSDA 180
E F+ + ++ TC + K L++ +++ + +V + ++I+ Y+ G ++A
Sbjct: 180 RVEISEFTLSSVVKTCASLK-ILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 181 EKVFNLMPV-KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
KV+N + V D V NS+++G +N A + NV + ++G ++ DL
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-RPNVRVLSSSLAGCSDNSDL 297
Query: 240 SSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
+Q+ + N + LC + + G+I +AR +F ++P K+VVSW +MI A
Sbjct: 298 WIGKQI-HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDA 356
Query: 295 YAQDLQIDEAVKLFIKLPHK------DGVSWSTIINGYIRVGKLDEAREVYNQM 342
YA + +A+++F ++ + + V++ +I+ G + E +E + M
Sbjct: 357 YAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 175/407 (42%), Gaps = 61/407 (14%)
Query: 90 FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
F ++ + S N ++ + A LFD +P+RD S ++ + R G
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 150 ELLELV----PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAG 201
L + PD L S + V+ + +V LM + +S +++
Sbjct: 70 ALFLQIHRASPD-LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDM 128
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN------AV 255
Y++ G + ++ FE + EK++VSWN ++SGF+ +G A +F + +
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 256 SWVTMLCG---FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL- 311
S V C + GK A + VV AMI+ Y+ I+EA+K++ L
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTGRDL--VVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 312 PHKDGVSWSTIINGYIRVGKLDEAREVYN-QMP-----------CKD------------- 346
H D V +++I+G IR EA + + Q P C D
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCV 306
Query: 347 -----IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+++ L +GL+ + G++ +A +F + ++ + W SMI + +G +A
Sbjct: 307 ALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKA 366
Query: 398 LDLFRQMPKK------NSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
L++FR+M ++ NSV++ +IS A AG + + F M+E+
Sbjct: 367 LEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 214/430 (49%), Gaps = 25/430 (5%)
Query: 304 AVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
AV++F +P W+ II G+ A Y M S RV
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSM--------LQQSSSSSAICRV 107
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
D + F + +C ++M CQ R + D S+ T++ Y++ G
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSAD---------SLLCTTLLDAYSKNG 158
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ SA +F M R++ SWN+LI G + + +A++ M EG + + T
Sbjct: 159 DLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALG 218
Query: 484 XXXXXXXXQVGNQLHEYILKSGYIND-LFVSNALIAMYAKCGRVESAEQVFTAIECV-DL 541
+ G + GY ND + VSNA I MY+KCG V+ A QVF +
Sbjct: 219 ACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSV 273
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
++WN++I+G+A++G A A + F ++ + PD V+++ L+AC HAGL GL +F
Sbjct: 274 VTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNN 333
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
M +E +HY C+VDLL R GRL EA +++ M + + LW SLLGA ++ ++E
Sbjct: 334 MACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVE 392
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
+ E A+ + E+ +N +++ LSN++A GRW++V R+R M K+ K+PG S+IE +
Sbjct: 393 MAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAK 452
Query: 722 NQIQCFLSDD 731
I F + D
Sbjct: 453 GTIHEFYNSD 462
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 160/359 (44%), Gaps = 36/359 (10%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
F ++ ++ + IS F G +S A Q+F + + WN +I G+ +S A
Sbjct: 32 FQSSFLRSRLLERCAISPF---GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAF 88
Query: 119 KLFDVMPERDNFSWALM----ITC-YTRKGKLEKARELLELVPDKL-----------ESA 162
+ M ++ + S A+ +TC +T K AR L D+L +S
Sbjct: 89 SWYRSMLQQSSSSSAICRVDALTCSFTLKAC---ARALCSSAMDQLHCQINRRGLSADSL 145
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
+++ Y+K G A K+F+ MPV+D+ S+N+++AG + A+ +++M +
Sbjct: 146 LCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 223 VVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
+ + V + + GD+ +F N N + + +++ G + +A ++F+
Sbjct: 206 IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 279 SMPC-KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLD 333
K+VV+WN MI +A + A+++F KL D VS+ + G ++
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 334 EAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLS-TRDTICWNSMIAG 387
V+N M CK + ++ L + GR+ EA + +S D + W S++
Sbjct: 326 YGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 140/302 (46%), Gaps = 31/302 (10%)
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----------AEKNVV 224
G S A ++F +P +N+++ G+ + LA ++ M + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC-----GFARHGKITEARRLFDS 279
+ + + + S+ QL +I N +S ++LC ++++G + A +LFD
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQI-NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTI-----INGYIRVGKLDE 334
MP ++V SWNA+IA + EA++L+ ++ +G+ S + + +G + E
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT-ICWNSMIAGFCQSGR 393
+++ ++ A + + G VD+A ++F Q + + + + WN+MI GF G
Sbjct: 229 GENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE 288
Query: 394 MDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNS 445
AL++F ++ K + VS+ ++ AG ++ ++F M ERN+ +
Sbjct: 289 AHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGC 348
Query: 446 LI 447
++
Sbjct: 349 VV 350
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFL---QNSLYFDALKSLVLMGREGK---KPDQS 476
G + A IF+ + + WN++I GF SL F +S++ + D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T +QLH I + G D + L+ Y+K G + SA ++F +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
D+ SWN+LI+G A EA + +K+M +E + +VT + L ACSH G +G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
++F D I A +D+ + G +++A+ V K + W +++ V
Sbjct: 231 NIFHGYSNDNVIVSNAA-----IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 657 ----HKNLEIGEFAAMRLSELEPHNASNYITLS 685
H+ LEI F + + ++P + S L+
Sbjct: 286 HGEAHRALEI--FDKLEDNGIKPDDVSYLAALT 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 48/289 (16%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+++ ++KNG + A +LFD+M R++ SWN +IAG + + EA +L+ M
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME----- 202
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK 190
T R+ ++ L AC + G + E +F+
Sbjct: 203 ------TEGIRRSEVTVVAAL---------GAC--------SHLGDVKEGENIFHGYSND 239
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI 249
+++ N+ + Y++ G + A FE+ +K+VV+WN M++GF G+ A ++F+K+
Sbjct: 240 NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
Query: 250 PN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQI 301
+ P+ VS++ L G + +F++M CK N+ + ++ ++ ++
Sbjct: 300 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 359
Query: 302 DEAVKLFIKLPH-KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
EA + + D V W +++ A E+Y+ + +IA+
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLG----------ASEIYSDVEMAEIAS 398
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSN-TIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
V N I K G V++A +VF T K++VT+N+MI+ FA +G+ A ++FDK+
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 95 QRNL----VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLE 146
+ VS+ + H +VE +F+ M ER+ + ++ +R G+L
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 147 KAREL---LELVPDKLESACWNSVIAG 170
+A ++ + ++PD + W S++
Sbjct: 361 EAHDIICSMSMIPDPV---LWQSLLGA 384
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 272/585 (46%), Gaps = 65/585 (11%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK---- 190
++T Y+ L++A+ + E + L WN +I Y + +F ++ V+ M K
Sbjct: 124 LVTFYSAFNLLDEAQTITE-NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D +Y S++ K AL F ++ +V G S ++SS R
Sbjct: 183 DEFTYPSVI-------KACAALLDF---------AYGRVVHG---SIEVSSHR------- 216
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
N ++ + R GK+ ARRLFD M ++ VSWNA+I Y + ++ EA KL +
Sbjct: 217 -CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 311 L----PHKDGVSWSTIINGYIRVGKLDEARE-VYNQMPCKDIAAETALMSGLIQTGRVDE 365
+ V+W+TI G + G A V C A+++GL +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 366 A--SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
K+F+ L R S +D R N++I+ Y++
Sbjct: 336 LKWGKVFHCLVIR--------------SCSFSHDIDNVR----------NSLITMYSRCS 371
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ A +FQ +E ++ +WNS+I+GF N + L M G P+ T
Sbjct: 372 DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILP 431
Query: 484 XXXXXXXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
Q G + H YIL + Y + L + N+L+ MYAK G + +A++VF ++ D +
Sbjct: 432 LFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++ SLI GY G A FK M + PD VT + +LSACSH+ L +G LF M
Sbjct: 492 TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM 551
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
F I EHYSC+VDL R G L++A ++ + + ++ + +LL AC +H N I
Sbjct: 552 EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNI 611
Query: 663 GEFAAMR-LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
GE+AA + L E +P + +Y+ L++M+A G W ++ ++ L+ D
Sbjct: 612 GEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 187/433 (43%), Gaps = 57/433 (13%)
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
FDS+ +V++ + + I E ++ LP W+ +I YIR + E+
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESV 169
Query: 337 EVYNQMPCKDIAAETALMSGLIQT---------GRVDEASKMFNQLSTRDTICWNSMIAG 387
VY +M K I A+ +I+ GRV S + +C N++I+
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC-NALISM 228
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSW 443
+ + G++D A LF +M ++++VSWN +I+ Y ++ A + M E +IV+W
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N++ G L+ Y AL +V M + + G H +++
Sbjct: 289 NTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIR 348
Query: 504 S-GYINDL-FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
S + +D+ V N+LI MY++C + A VF +E L +WNS+ISG+A N + E
Sbjct: 349 SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG----------------LDLFKCMVED 605
K+ML P+ +T +L + G G L L+ +V+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 606 FAI--EPLAEH-------------YSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLW 647
+A E +A Y+ L+D GR+G+ E A + MD +K +
Sbjct: 469 YAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 648 GSLLGACRVHKNL 660
++L AC H NL
Sbjct: 529 VAVLSACS-HSNL 540
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 69/394 (17%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL N++IS++ + GK+ AR+LFD+MS+R+ VSWN +I Y + EA KL D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 126 -------------------ERDNFSWAL-----MITCYTRKGKLEKARELLELVPDKLES 161
E N+ AL M C R G + L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL---------K 328
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY--------NSMLAGYTQNGKMGLALH 213
AC + G K G KVF+ + ++ S+ NS++ Y++ + A
Sbjct: 329 ACSH---IGALKWG------KVFHCLVIRS-CSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR--- 266
F+++ ++ +WN ++SGF + L +++ +PN ++ ++L FAR
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 267 --HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
HGK L ++ WN+++ YA+ +I A ++F + +D V+++++I+
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI- 379
GY R+GK + A + M I + A++S + V E +F ++ I
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR 558
Query: 380 ----CWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
++ M+ +C++G +D+A D+F +P + S
Sbjct: 559 LRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 149/335 (44%), Gaps = 64/335 (19%)
Query: 31 IGGKHVFNKNQQIIHLGKL--GKVEEAVRVFSNTIHKNLVTY-NSMISVFAKNGKISDAR 87
IG + N + H+G L GKV + + S + ++ NS+I+++++ + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 88 QLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKG 143
+F ++ +L +WN++I+G+ +N EE S L M ++ + A ++ + R G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 144 KLEKAREL-LELVPDKLESAC---WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
L+ +E ++ + C WNS++ YAK G+ A++VF+ M +D V+Y S++
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
GY + GK +AL +F+ M + P+ V+ V
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGI---------------------------KPDHVTMVA 530
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW 319
+L + + E LF M + + ++L H +
Sbjct: 531 VLSACSHSNLVREGHWLFTKM---------------------EHVFGIRLRLEH-----Y 564
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
S +++ Y R G LD+AR++++ +P + +A A +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G QLH + + SG D + L+ Y+ ++ A+ + E + + WN LI Y
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
N E+ +K+M+S+ + D+ T+ ++ AC+
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 272/585 (46%), Gaps = 65/585 (11%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK---- 190
++T Y+ L++A+ + E + L WN +I Y + +F ++ V+ M K
Sbjct: 124 LVTFYSAFNLLDEAQTITE-NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D +Y S++ K AL F ++ +V G S ++SS R
Sbjct: 183 DEFTYPSVI-------KACAALLDF---------AYGRVVHG---SIEVSSHR------- 216
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
N ++ + R GK+ ARRLFD M ++ VSWNA+I Y + ++ EA KL +
Sbjct: 217 -CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 311 L----PHKDGVSWSTIINGYIRVGKLDEARE-VYNQMPCKDIAAETALMSGLIQTGRVDE 365
+ V+W+TI G + G A V C A+++GL +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 366 A--SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
K+F+ L R S +D R N++I+ Y++
Sbjct: 336 LKWGKVFHCLVIR--------------SCSFSHDIDNVR----------NSLITMYSRCS 371
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ A +FQ +E ++ +WNS+I+GF N + L M G P+ T
Sbjct: 372 DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILP 431
Query: 484 XXXXXXXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
Q G + H YIL + Y + L + N+L+ MYAK G + +A++VF ++ D +
Sbjct: 432 LFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++ SLI GY G A FK M + PD VT + +LSACSH+ L +G LF M
Sbjct: 492 TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM 551
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
F I EHYSC+VDL R G L++A ++ + + ++ + +LL AC +H N I
Sbjct: 552 EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNI 611
Query: 663 GEFAAMR-LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
GE+AA + L E +P + +Y+ L++M+A G W ++ ++ L+ D
Sbjct: 612 GEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 187/433 (43%), Gaps = 57/433 (13%)
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
FDS+ +V++ + + I E ++ LP W+ +I YIR + E+
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESV 169
Query: 337 EVYNQMPCKDIAAETALMSGLIQT---------GRVDEASKMFNQLSTRDTICWNSMIAG 387
VY +M K I A+ +I+ GRV S + +C N++I+
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC-NALISM 228
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSW 443
+ + G++D A LF +M ++++VSWN +I+ Y ++ A + M E +IV+W
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N++ G L+ Y AL +V M + + G H +++
Sbjct: 289 NTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIR 348
Query: 504 S-GYINDL-FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
S + +D+ V N+LI MY++C + A VF +E L +WNS+ISG+A N + E
Sbjct: 349 SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG----------------LDLFKCMVED 605
K+ML P+ +T +L + G G L L+ +V+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 606 FAI--EPLAEH-------------YSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLW 647
+A E +A Y+ L+D GR+G+ E A + MD +K +
Sbjct: 469 YAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 648 GSLLGACRVHKNL 660
++L AC H NL
Sbjct: 529 VAVLSACS-HSNL 540
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 69/394 (17%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL N++IS++ + GK+ AR+LFD+MS+R+ VSWN +I Y + EA KL D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 126 -------------------ERDNFSWAL-----MITCYTRKGKLEKARELLELVPDKLES 161
E N+ AL M C R G + L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL---------K 328
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSY--------NSMLAGYTQNGKMGLALH 213
AC + G K G KVF+ + ++ S+ NS++ Y++ + A
Sbjct: 329 ACSH---IGALKWG------KVFHCLVIRS-CSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR--- 266
F+++ ++ +WN ++SGF + L +++ +PN ++ ++L FAR
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 267 --HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
HGK L ++ WN+++ YA+ +I A ++F + +D V+++++I+
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI- 379
GY R+GK + A + M I + A++S + V E +F ++ I
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR 558
Query: 380 ----CWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
++ M+ +C++G +D+A D+F +P + S
Sbjct: 559 LRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 149/335 (44%), Gaps = 64/335 (19%)
Query: 31 IGGKHVFNKNQQIIHLGKL--GKVEEAVRVFSNTIHKNLVTY-NSMISVFAKNGKISDAR 87
IG + N + H+G L GKV + + S + ++ NS+I+++++ + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 88 QLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKG 143
+F ++ +L +WN++I+G+ +N EE S L M ++ + A ++ + R G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 144 KLEKAREL-LELVPDKLESAC---WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
L+ +E ++ + C WNS++ YAK G+ A++VF+ M +D V+Y S++
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
GY + GK +AL +F+ M + P+ V+ V
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGI---------------------------KPDHVTMVA 530
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSW 319
+L + + E LF M + + ++L H +
Sbjct: 531 VLSACSHSNLVREGHWLFTKM---------------------EHVFGIRLRLEH-----Y 564
Query: 320 STIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
S +++ Y R G LD+AR++++ +P + +A A +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G QLH + + SG D + L+ Y+ ++ A+ + E + + WN LI Y
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
N E+ +K+M+S+ + D+ T+ ++ AC+
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 181/330 (54%), Gaps = 8/330 (2%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + + A +F + + ++V W+ L+ G+++ L + L+ M +G +PD+ +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYI-NDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
G +HE++ K +I +D+FV AL+ MYAKCG +E+A +VF +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGL 596
++ SW +LI GYA GYA +A +++ E+ + PD V +G+L+AC+H G +G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+ + M + I P EHYSC+VDL+ R GRL++A N++ M +K A +WG+LL CR
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 657 HKNLEIGEFAAMRLSELEPHNA----SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
HKN+E+GE A L +LE N + + LSN++ R E ++R ++ + K
Sbjct: 402 HKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
PG S +EV + F+S D P +QI
Sbjct: 462 PGWSVLEVDGNVTKFVSGDVS--HPNLLQI 489
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 407 KNSVSWNTMISGYAQAGQMDS----AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
+N+ + + +++ + ++ A +IF ++E N ++++I ++S L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 463 LVLMGREGKK---PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG-YINDLFVSNALIA 518
+LM +E ++ P TF VG Q+H +++K+G +++D V ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+Y + + A +VF I D++ W+ L++GY G E + F++ML + + PD+ +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
L+AC+ G QG + + + + IE + LVD+ + G +E A V + +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 639 DVKANAGLWGSLLGA 653
+ N W +L+G
Sbjct: 281 -TRRNVFSWAALIGG 294
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 161/393 (40%), Gaps = 70/393 (17%)
Query: 63 IHKNLVTYNSMISVFAK----NGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+H+N + +++ F N A +FD + N ++TMI +S
Sbjct: 39 LHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGL 98
Query: 119 KLF---------DVMPERDNFSW---ALMITCYTRKGK-----LEKARELLELVPDKLES 161
+ F D+ P F + A + C+ GK + K L +S
Sbjct: 99 RYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS------DS 152
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
V+ Y + DA KVF+ +P D+V ++ ++ GY + G L F +M
Sbjct: 153 HVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM--- 209
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+V G P+ S T L A+ G + + + + + +
Sbjct: 210 -------LVKGL-----------------EPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 282 CK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
K +V A++ YA+ I+ AV++F KL ++ SW+ +I GY G +A
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 337 EVYNQMPCKD-IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC-----WNSMIA 386
++ +D I ++ ++ G++ G ++E M + R I ++ ++
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVD 365
Query: 387 GFCQSGRMDEALDLFRQMPKKNSVS-WNTMISG 418
C++GR+D+AL+L +MP K S W +++G
Sbjct: 366 LMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++ Y +D + +A K+F ++P D V W ++NGY+R G E EV+ +M K +
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 349 AE----TALMSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALD 399
+ T ++ Q G + + + + + D +++ + + G ++ A++
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLI 447
+F+++ ++N SW +I GYA G A + +E + + +S++
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 323
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 53/255 (20%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWST------- 321
A +FDS+ N ++ MI ++ Q ++ F+ + ++ S+ T
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 322 -IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
+ + VGK V N + D +T ++ ++ + +A K+F+++ D +
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 381 WNSMIAGFCQSGRMDEALDLFRQM------PKKNSV------------------------ 410
W+ ++ G+ + G E L++FR+M P + SV
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 411 --SW--------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
SW ++ YA+ G +++A +F+ + RN+ SW +LI G+ A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 461 KSLVLMGRE-GKKPD 474
L + RE G KPD
Sbjct: 306 TCLERLEREDGIKPD 320
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 182/326 (55%), Gaps = 12/326 (3%)
Query: 413 NTMISGYAQAGQMDSAENIF-QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+++ Y+ G +D A +F + E++NIV W ++I+ + +N +A++ M E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNALIAMYAKCGRVESA 529
+ D Q+G +++ +K DL + N+L+ MY K G E A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE------VVPDQVTFIGML 583
++F D+ ++ S+I GYALNG A E+ + FK+M + + + P+ VTFIG+L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
ACSH+GL +G FK M+ D+ ++P H+ C+VDL R G L++A + M +K N
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+W +LLGAC +H N+E+GE R+ EL+ + +Y+ LSN++A G W+E ++R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLS 729
+R +R +PG SWIE+ + I F+S
Sbjct: 404 VRKRR---MPGKSWIELGSIINEFVS 426
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQR-NLVSWNTMIAGYLHNSMVEEASKLFDVMP---- 125
S++ ++ G + ARQ+FD+ ++ N+V W MI+ Y N EA +LF M
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDK-----LESACWNSVIAGYAKKGQFSDA 180
E D + ++ G ++ E+ + ++ NS++ Y K G+ A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWN-------L 228
K+F+ KD+ +Y SM+ GY NG+ +L F+KM ++ V++ N L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 229 MV---SGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-N 284
M SG V G + + P + M+ F R G + +A + MP K N
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 285 VVSWNAMIAAYA--QDLQIDEAVKLFIKLPHKDGV-SWSTIINGYIRVGKLDEAREVYN- 340
V W ++ A + ++++ E V+ I +D V + + N Y G DE ++ +
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 341 ----QMPCK 345
+MP K
Sbjct: 404 VRKRRMPGK 412
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 136/271 (50%), Gaps = 31/271 (11%)
Query: 196 NSMLAGYTQNGKMGLALHFFE---KMAEKNVVSWNLMVSGFVNSGDLSSA---RQ---LF 246
N L Y ++G+ AL F + + V S++++ + V+S +S+ RQ L
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 247 EKIPNPNAVSWVTMLCGF-ARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEA 304
K+ + T L GF + G + AR++FD P K N+V W AMI+AY ++ EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 305 VKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCK------DIAAETALM 354
++LF ++ + DGV + ++ +G + E+Y++ + D+ +L+
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 355 SGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP--------- 405
+ +++G ++A K+F++ +D + SMI G+ +G+ E+L+LF++M
Sbjct: 212 NMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV 271
Query: 406 -KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
N V++ ++ + +G ++ + F++M
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKRHFKSM 302
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKN 222
S++ Y+ G A +VF+ P K ++V + +M++ YT+N A+ F++M AEK
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPN-------AVSWV---TMLCGFARHGKITE 272
+ ++ DL A Q+ E+I + + A+ ++L + + G+ +
Sbjct: 164 ELDGVIVTVALSACADLG-AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII--NGYIRVG 330
AR+LFD K+V ++ +MI YA + Q E+++LF K+ D S T+I N +G
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQ-SQDTVITPNDVTFIG 281
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN-QLSTRDTICWNSMIAGFC 389
L M C SGL++ G+ S + + L R+ + M+ FC
Sbjct: 282 VL---------MACSH--------SGLVEEGKRHFKSMIMDYNLKPREA-HFGCMVDLFC 323
Query: 390 QSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENI 431
+SG + +A + QMP K N+V W T++ + G ++ E +
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI-ECVDLISWNSLISGYA 552
G Q+H + K G+ + + +L+ Y+ G V+ A QVF E +++ W ++IS Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
N ++EA + FK+M +E++ D V LSAC+ G G +++
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIY 190
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-----SQRNLVSWN 102
K G+ E+A ++F ++ K++ TY SMI +A NG+ ++ +LF KM SQ +++ N
Sbjct: 216 KSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN 275
Query: 103 TM-IAGYL----HNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARE 150
+ G L H+ +VEE + F M P +F M+ + R G L+ A E
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF--GCMVDLFCRSGHLKDAHE 333
Query: 151 LLELVPDKLESACWNSVIAGYAKKGQFSDAEKV 183
+ +P K + W +++ + G E+V
Sbjct: 334 FINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 49 LGKVEEAVRVFSNTIHK------NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
LG V+ ++S +I + +L NS+++++ K+G+ AR+LFD+ ++++ ++
Sbjct: 180 LGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYT 239
Query: 103 TMIAGYLHNSMVEEASKLFDVM------------PERDNFSWALMITCYTRKGKLEKA-R 149
+MI GY N +E+ +LF M P F LM ++ G +E+ R
Sbjct: 240 SMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS--GLVEEGKR 297
Query: 150 ELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQN 205
++ D K A + ++ + + G DA + N MP+K + V + ++L + +
Sbjct: 298 HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLH 357
Query: 206 GKMGLA 211
G + L
Sbjct: 358 GNVELG 363
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 176/322 (54%), Gaps = 16/322 (4%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL--QNSLYFDALKSLVLMGR-- 468
T++ YA+ G + A +F M ER V+WN++I G+ ++ +A K++VL R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 469 ---EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN--DLFVSNALIAMYAKC 523
G +P +T ++G+ +H YI K G+ D+F+ AL+ MY+KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + +A VF ++ ++ +W S+ +G ALNG E +M + P+++TF +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SA H GL +G++LFK M F + P+ EHY C+VDLLG+ GR++EA+ + M +K +
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHN-------ASNYITLSNMHAEAGRWEE 696
A L SL AC ++ +GE L E+E + +Y+ LSN+ A G+W E
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 697 VERLRVLMRDKRAGKLPGCSWI 718
VE+LR M+++R PG S++
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 35/277 (12%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH-----NSMVEEASKLF---- 121
+++ +AKNG + AR++FD+M +R V+WN MI GY N +A LF
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 122 ----DVMPERDNFSWALMITCYTRKGKLEKAR------ELLELVPDKLESACWNSVIAGY 171
V P + + +++ ++ G LE E L P+ ++ +++ Y
Sbjct: 211 CCGSGVRP--TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPE-VDVFIGTALVDMY 267
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWN 227
+K G ++A VF LM VK++ ++ SM G NG+ + +MAE N +++
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARRLFDSMPC 282
++S + + G + +LF+ + V+ V G + G+I EA + +MP
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 283 K-NVVSWNAMIAA---YAQDLQIDEAVKLFIKLPHKD 315
K + + ++ A Y + + +E K +++ +D
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKALLEIERED 424
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG-----KITEARRLFDSMPC----- 282
+ +GDL AR++F+++P +V+W M+ G+ H +A LF C
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGV 216
Query: 283 -KNVVSWNAMIAAYAQD--LQIDEAVKLFIK----LPHKDGVSWSTIINGYIRVGKLDEA 335
+ +++A +Q L+I V +I+ P D + +++ Y + G L+ A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
V+ M K++ T++ +GL GR +E + N+++ + I + S+++ +
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 392 GRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAM 435
G ++E ++LF+ M + V+ + ++ +AG++ A AM
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 215/441 (48%), Gaps = 34/441 (7%)
Query: 284 NVVSWNAMIAAYAQ-DLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
NVV + ++ AY++ + ++ +F +P+++ SW+ II + R G
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSG------------ 112
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
+ +D +M+ + R +I C + R ++ DL
Sbjct: 113 ---------------FASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH 157
Query: 403 QMPKKNSVSWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+ K S + +S Y G++ A +F M R+ V + ++ G++Q
Sbjct: 158 VLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAM 217
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
L MG G D + G +H + ++ L + NA+
Sbjct: 218 LGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAIT 277
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
MY KC ++ A VF + D+ISW+SLI GY L+G + +FK F +ML E + P+ V
Sbjct: 278 DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAV 337
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
TF+G+LSAC+H GL + F+ M +++ I P +HY+ + D + R G LEEA +
Sbjct: 338 TFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLED 396
Query: 638 MDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEV 697
M VK + + G++L C+V+ N+E+GE A L +L+P AS Y+TL+ +++ AGR++E
Sbjct: 397 MPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEA 456
Query: 698 ERLRVLMRDKRAGKLPGCSWI 718
E LR M++K+ K+PGCS I
Sbjct: 457 ESLRQWMKEKQISKVPGCSSI 477
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 180/411 (43%), Gaps = 65/411 (15%)
Query: 63 IHKNLVTYNSMISVFAK-NGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
++ N+V + ++ ++K N + +F M RN+ SWN +I + + ++ LF
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 122 DVM-----PERDNFSWALMITCYTRKGKLEKARELLELVPDKL--ESACW--NSVIAGYA 172
M D+F+ L++ + + K+ +L+ ++ KL S+ + ++++ Y
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACS-ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE------------ 220
G+ A K+F+ MPV+D V Y +M GY Q G+ L L F +M
Sbjct: 181 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 221 --------------KNVVSW-------------NLMVSGFVNSGDLSSARQLFEKIPNPN 253
K+V W N + +V L A +F + +
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFI 309
+SW +++ G+ G + + +LFD M + N V++ +++A A ++++ L+
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS-WLYF 359
Query: 310 KLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRV 363
+L + + ++++ + R G L+EA + MP K D A A++SG G V
Sbjct: 360 RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 364 ---DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS 411
+ ++ QL R + ++ + +GR DEA L RQ K+ +S
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESL-RQWMKEKQIS 469
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
K ++ A VF N +++++++S+I + +G + + +LFD+M + N V++
Sbjct: 282 KCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLG 341
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS----WALMITCYTRKGKLEKARELLELVPDKL 159
+++ H +VE++ F +M E + +A + C +R G LE+A + LE +P K
Sbjct: 342 VLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKP 401
Query: 160 ESACWNSVIAGYAKKGQFSDAEKV----FNLMPVKDLVSYNSMLAG-YTQNGKMGLALHF 214
+ A +V++G G E+V L P K SY LAG Y+ G+ A
Sbjct: 402 DEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK--ASYYVTLAGLYSAAGRFDEAESL 459
Query: 215 FEKMAEKNV 223
+ M EK +
Sbjct: 460 RQWMKEKQI 468
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 191/347 (55%), Gaps = 3/347 (0%)
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
NS++ + G +D A LF ++PK++ VSWN++I+G + G + +A +F M ++NI+
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SWN +I+ +L + ++ M R G + ++ST + G +H +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
+++ + + + ALI MY KC V A ++F ++ + ++WN +I + L+G
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+ F+ M++ + PD+VTF+G+L C+ AGL +QG + MV++F I+P H C+ +L
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL 396
Query: 622 LGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
G EEA ++ + DV + W +LL + R N +GE A L E +P N
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
Y L N+++ GRWE+V R+R ++++++ G++PGC ++++ +
Sbjct: 457 KYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
N ++ + G L A++LF +IP + VSW +++ G R+G + A +LFD MP KN++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQM 342
SWN MI+AY ++ LF ++ + + ++N R +L E R V+ +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 343 P----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
+ +TAL+ + V A ++F+ LS R+ + WN MI C GR + L
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 399 DLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+LF M + + V++ ++ G A+AG + ++ + M
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 194/439 (44%), Gaps = 49/439 (11%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
H+F + ++I G A+R+ ++ +Y +S++ GK+ A +F
Sbjct: 37 HLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYT--VSIYRSIGKLYCANPVFK--- 91
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKL-FDVMP---ERDNFSWALMI-----TCYTRKGKL 145
YL +S ++A FD++ D++++ +I TC GK+
Sbjct: 92 ------------AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKM 139
Query: 146 EKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
+ + L NS++ Y G A+K+F +P +D+VS+NS++AG +N
Sbjct: 140 CHGQAIKHGCDQVLPVQ--NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRN 197
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTML 261
G + A F++M +KN++SWN+M+S ++ + + + LF ++ N + V +L
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 262 CGFARHGKITEAR----RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV 317
R ++ E R L + +VV A+I Y + ++ A ++F L ++ V
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 318 SWSTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
+W+ +I + G+ + E++ N M D ++ G + G V + ++ +
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 374 STRDTICWN-----SMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQ 424
I N M + +G +EA + + +P ++ S W ++S G
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Query: 425 MDSAENIFQAMEERNIVSW 443
E+I +++ E + +++
Sbjct: 438 PTLGESIAKSLIETDPLNY 456
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 30/224 (13%)
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL--YFDALKSLVLMGREGKKP 473
+S Y G++ A +F+A L++ + +L YFD L R G P
Sbjct: 74 VSIYRSIGKLYCANPVFKAY----------LVSSSPKQALGFYFDIL-------RFGFVP 116
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
D TF G H +K G L V N+L+ MY CG ++ A+++F
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
I D++SWNS+I+G NG + A K F +M + ++ + M+SA A
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI----MISAYLGANNPG 232
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLL---GRMGRLEEAFNV 634
+ LF+ MV + S LV LL GR RL+E +V
Sbjct: 233 VSISLFREMVR----AGFQGNESTLVLLLNACGRSARLKEGRSV 272
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 183/315 (58%), Gaps = 1/315 (0%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
++++ YA+ G++ A +F M +RN+V+W+ ++ G+ Q +AL E
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
+ +F ++G Q+H +KS + + FV ++L+++Y+KCG E A QV
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + +L WN+++ YA + + + + FK+M + P+ +TF+ +L+ACSHAGL
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
++G F M E IEP +HY+ LVD+LGR GRL+EA V+ M + +WG+LL
Sbjct: 335 DEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
+C VHKN E+ FAA ++ EL P ++ +I+LSN +A GR+E+ + R L+RD+ K
Sbjct: 394 SCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 713 PGCSWIEVQNQIQCF 727
G SW+E +N++ F
Sbjct: 454 TGLSWVEERNKVHTF 468
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 150/303 (49%), Gaps = 21/303 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPER-- 127
+S++ ++AK G+I AR++FD+M QRN+V+W+ M+ GY EEA LF + + E
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 128 -DNFSWALMITCYTRKGKLEKARELLEL---VPDKLESACWNSVIAGYAKKGQFSDAEKV 183
+++S++ +I+ LE R++ L S +S+++ Y+K G A +V
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDL 239
FN +PVK+L +N+ML Y Q+ + F++M + N +++ +++ ++G +
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 240 SSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIAA 294
R F+++ P + +++ R G++ EA + +MP S W A++ +
Sbjct: 335 DEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Query: 295 YA----QDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
+L A K+F P G+ S + N Y G+ ++A + + + E
Sbjct: 395 CTVHKNTELAAFAADKVFELGPVSSGMHIS-LSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 351 TAL 353
T L
Sbjct: 454 TGL 456
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 135/331 (40%), Gaps = 74/331 (22%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA-----RQL 245
D+ +S++ Y + G++ A F++M ++NVV+W+ M+ G+ G+ A L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 246 FEKIP-NPNAVSWVTMLCG---------------------------------FARHGKIT 271
FE + N + S V +C +++ G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYI 327
A ++F+ +P KN+ WNAM+ AYAQ + ++LF ++ + +++ ++N
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
G +DE R ++QM + R++ K + S++
Sbjct: 330 HAGLVDEGRYYFDQM----------------KESRIEPTDKHY-----------ASLVDM 362
Query: 388 FCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMDSAENIFQAMEERNIVSWN-- 444
++GR+ EAL++ MP + S W +++ + A + E VS
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 445 -SLITGFLQNSLYFDALKSLVLMGREGKKPD 474
SL + + + DA K+ L+ G+K +
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G E A +VF+ KNL +N+M+ +A++ +LF +M + N +++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKL 159
++ H +V+E FD M E + +A ++ R G+L++A E++ +P
Sbjct: 324 VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDP 383
Query: 160 ESACWNSVIAGYA--KKGQFS--DAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
+ W +++ K + + A+KVF L PV + + S+ Y +G+
Sbjct: 384 TESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGM-HISLSNAYAADGR 434
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 209/409 (51%), Gaps = 65/409 (15%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
+ +H + AR++FD + + WN MI+ Y + +EA KLF +P D VSW+ +I
Sbjct: 146 YVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMI 205
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN---QLSTR-DTI 379
G+ +V L+ AR+ +++MP K + + A++SG Q G ++A ++FN +L R +
Sbjct: 206 TGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNET 265
Query: 380 CWNSMIAG--------------------------FCQSGRMD---------EALDLFRQM 404
W +I+ F ++ +D A +F ++
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 405 -PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN---SLYFDAL 460
++N V+WN MISGY + G M SA +F M +RN+VSWNSLI G+ N +L +
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-------SGYINDLFVS 513
+ ++ G KPD+ T ++G+ + +YI K SGY
Sbjct: 386 EDMIDYG--DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY------- 436
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+LI MYA+ G + A++VF ++ D++S+N+L + +A NG +E +M E +
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
PD+VT+ +L+AC+ AGL +G +FK + PLA+HY+C+ DLL
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 228/487 (46%), Gaps = 76/487 (15%)
Query: 61 NTIHKNLVTYNSM----------ISVFAK-NGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
N IH L+ +NS+ IS + R +FD ++ N+ N+M +
Sbjct: 23 NQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFS 82
Query: 110 HNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESAC 163
M + +L++ +MP D FS+ ++I R G L +A L+E + +
Sbjct: 83 KMDMANDVLRLYEQRSRCGIMP--DAFSFPVVIKSAGRFGILFQA--LVEKLGFFKDPYV 138
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
N ++ Y K A KVF+ + + +N M++GY + G A F+ M E +V
Sbjct: 139 RNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV 198
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
VSW +M++GF DL +AR+ F+++P + VSW ML G+A++G +A RLF+ M
Sbjct: 199 VSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 281 -PCKNVVSWNAMIAA-----------------------------------YAQDLQIDEA 304
N +W +I+A +A+ I A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 305 VKLFIKL-PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
++F +L ++ V+W+ +I+GY R+G + AR++++ MP +++ + +L++G G+
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 364 DEASKMFNQL-----STRDTICWNSMIAGFCQSGRM------DEALDLFRQ-MPKKNSVS 411
A + F + S D + +MI+ G M D +D R+ K N
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEV---TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG 435
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+ ++I YA+ G + A+ +F M+ER++VS+N+L T F N + L L M EG
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGI 495
Query: 472 KPDQSTF 478
+PD+ T+
Sbjct: 496 EPDRVTY 502
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 224/480 (46%), Gaps = 51/480 (10%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIR 328
R +FDS+ NV N+M +++ ++ ++L+ + D S+ +I R
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
G L +A V KD +M ++ V+ A K+F+Q+S R WN MI+G+
Sbjct: 119 FGILFQAL-VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
+ G +EA LF MP+ + VSW MI+G+A+ +++A F M E+++VSWN++++
Sbjct: 178 WKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
G+ QN DAL+ M R G +P+++T+ + L + I +
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL 297
Query: 509 DLFVSNALIAMYAKC--------------------------------GRVESAEQVFTAI 536
+ FV AL+ M+AKC G + SA Q+F +
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQG 595
+++SWNSLI+GYA NG A A + F+ M+ + PD+VT I +LSAC H
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA----D 413
Query: 596 LDLFKCMVEDF---AIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGS 649
L+L C+V+ I+ Y L+ + R G L EA F+ ++ DV + L+ +
Sbjct: 414 LELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTA 473
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
+ L + + M+ +EP + Y ++ AG +E +R+ +R+ A
Sbjct: 474 FAANGDGVETLNL--LSKMKDEGIEPDRVT-YTSVLTACNRAGLLKEGQRIFKSIRNPLA 530
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 217/469 (46%), Gaps = 94/469 (20%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ---------------------- 95
+F + N+ NSM F+K +D +L+++ S+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 96 ------------RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKG 143
++ N ++ Y+ + VE A K+FD + +R W +MI+ Y + G
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 144 KLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
E+A +L +++P+ + W +I G+AK +A K F+ MP K +VS+N+ML+GY
Sbjct: 182 NKEEACKLFDMMPEN-DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYA 240
Query: 204 QNGKMGLALHFFEKM----AEKNVVSWNLMVSG--------------------------F 233
QNG AL F M N +W +++S F
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCF 300
Query: 234 VNSG---------DLSSARQLFEKI-PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
V + D+ SAR++F ++ N V+W M+ G+ R G ++ AR+LFD+MP +
Sbjct: 301 VKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR 360
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKL-----PHKDGVSWSTIINGYIRVGKL------ 332
NVVSWN++IA YA + Q A++ F + D V+ ++++ + L
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI 420
Query: 333 -DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
D R+ NQ+ D + +L+ + G + EA ++F+++ RD + +N++ F +
Sbjct: 421 VDYIRK--NQIKLND-SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAAN 477
Query: 392 GRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G E L+L +M + + V++ ++++ +AG + + IF+++
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 181/347 (52%), Gaps = 52/347 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G EEA ++F ++V++ MI+ FAK + +AR+ FD+M ++++VSWN M++G
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 108 YLHNSMVEEASKLFDVMPE---RDN-FSWALMITCYTRKGKLEKARELLELVPDK---LE 160
Y N E+A +LF+ M R N +W ++I+ + + R L++L+ +K L
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 161 SACWNSVIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+++ +AK A ++FN L ++LV++N+M++GYT+ G M A F+ M
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTML--CG--------- 263
++NVVSWN +++G+ ++G + A + FE + P+ V+ +++L CG
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 264 ------------------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+AR G + EA+R+FD M ++VVS+N + A+A +
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANG 478
Query: 300 QIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQM 342
E + L K+ + D V++++++ R G L E + ++ +
Sbjct: 479 DGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 179/330 (54%), Gaps = 8/330 (2%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + + A +F + + ++V W+ L+ G+++ L + L+ M G +PD+ +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYI-NDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
G +HE++ K +I +D+FV AL+ MYAKCG +E+A +VF +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGL 596
++ SW +LI GYA GYA +A ++ E+ + PD V +G+L+AC+H G +G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+ + M + I P EHYSC+VDL+ R GRL++A +++ M +K A +WG+LL CR
Sbjct: 342 TMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRT 401
Query: 657 HKNLEIGEFAAMRLSELEPHNA----SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
HKN+E+GE A L +LE N + + LSN++ R E ++R ++ + K
Sbjct: 402 HKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKT 461
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
PG S +EV + F+S D P +QI
Sbjct: 462 PGWSLLEVDGIVTKFVSGDVS--HPNLLQI 489
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 407 KNSVSWNTMISGYAQAGQMDS----AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
+N+ + + +++ + ++ A +IF ++E N ++++I ++S L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 463 LVLMGREGKK---PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG-YINDLFVSNALIA 518
+LM +E ++ P TF VG Q+H +++K+G +++D V ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+Y + + A +VF I D++ W+ L++GY G E + FK+ML + PD+ +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
L+AC+ G QG + + + + IE + LVD+ + G +E A V +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 639 DVKANAGLWGSLLGA 653
+ N W +L+G
Sbjct: 281 -TRRNVFSWAALIGG 294
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 158/385 (41%), Gaps = 87/385 (22%)
Query: 95 QRNLVSWNTMIAGYLH----NSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA-R 149
RN + + ++ +LH N AS +FD + ++F + MI +R + R
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 150 ELLELVPDKLESAC-----WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
L +V ++ E ++ +I K FS +++ + VK+ V + G+ Q
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI-HCWVVKNGVFLSD---GHVQ 155
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
G + + +V L AR++F++IP P+ V W ++ G+
Sbjct: 156 TGVLRI----------------------YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 265 ARHGKITEARRLFDSMPCK----------------------------------------N 284
R G +E +F M + +
Sbjct: 194 VRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESD 253
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC 344
V A++ YA+ I+ AV++F KL ++ SW+ +I GY G +A +++
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 345 KD-IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRM 394
+D I ++ ++ G++ G ++E M + R I ++ ++ C++GR+
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 395 DEALDLFRQMPKKNSVS-WNTMISG 418
D+ALDL +MP K S W +++G
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNG 398
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/288 (18%), Positives = 122/288 (42%), Gaps = 42/288 (14%)
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-------NVVSWNL 228
F A +F+ + + + Y++M+ +++ + L L +F M ++ + ++++
Sbjct: 62 HFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
++ + + S +Q+ WV F G +
Sbjct: 122 LIVACLKACFFSVGKQIH---------CWVVKNGVFLSDGHVQ----------------- 155
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++ Y +D + +A K+F ++P D V W ++NGY+R G E EV+ +M + I
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 349 AE----TALMSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALD 399
+ T ++ Q G + + + + + D +++ + + G ++ A++
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLI 447
+F ++ ++N SW +I GYA G A +E + + +S++
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
++ ++ ++ + DAR++FD++ Q ++V W+ ++ GY+ + E ++F M E
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDK--LESACW--NSVIAGYAKKGQFSDAEK 182
D FS +T + G L + + + E V K +ES + +++ YAK G A +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV-----SGFVNSG 237
VF + +++ S+ +++ GY G A +++ ++ + + +V + + G
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 238 DLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAM 291
L R + E + P + ++ R G++ +A L + MP K + S W A+
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Query: 292 I 292
+
Sbjct: 396 L 396
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 12/248 (4%)
Query: 315 DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
DG + ++ Y+ L +AR+V++++P D+ LM+G ++ G E ++F ++
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 375 TR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT-----MISGYAQAGQM 425
R D + + Q G + + + + KK + + ++ YA+ G +
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE-GKKPDQSTFXXXXXX 484
++A +F+ + RN+ SW +LI G+ A L + RE G KPD
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 485 XXXXXXXQVGNQLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
+ G + E + + G + ++ + + GR++ A + + L S
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 544 -WNSLISG 550
W +L++G
Sbjct: 391 VWGALLNG 398
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
I ++ +++ ++AK G I A ++F+K+++RN+ SW +I GY ++A+ D
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLD 309
Query: 123 VMPERDNFS------WALMITCYTRKGKLEKARELLE-------LVPDKLESACWNSVIA 169
+ D ++ C G LE+ R +LE + P +C ++
Sbjct: 310 RIEREDGIKPDSVVLLGVLAAC-AHGGFLEEGRTMLENMEARYGITPKHEHYSC---IVD 365
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVS-YNSMLAG 201
+ G+ DA + MP+K L S + ++L G
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 157/614 (25%), Positives = 281/614 (45%), Gaps = 69/614 (11%)
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
K G A + F+ M V+D+V+YN +++G N + G +L E AE +VS L S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISG---NSRYGCSLRAIELYAE--MVSCGLRESA 112
Query: 233 FVNSGDLS-SARQLF--EKIPNPNAVSWVTMLCG-FARHGKI---------TEARRLFDS 279
LS + +LF E I V + C F R + A +LFD
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEA 335
M +N+ N ++ + Q + ++++++ K+G+++ +I G + E
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 336 REVYNQMP-----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
+++++ + +I L+ G + + + FN + +D I WNS+++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 391 SGRMDEALDLFRQMP---KKNSVS------------------------------------ 411
G + ++LDLF +M K+ S+
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 412 -WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+ +I Y + ++++ ++Q++ N+ NSL+T + + D ++ LM EG
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGN--QLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
D+ T + + +H +KSGY D+ VS +LI Y K G+ E
Sbjct: 413 TGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEV 472
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+ +VF ++ ++ S+I+GYA NG + K ++M ++PD+VT + +LS CSH
Sbjct: 473 SRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSH 532
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
+GL +G +F + + I P + Y+C+VDLLGR G +E+A ++ A+ W
Sbjct: 533 SGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWS 592
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
SLL +CR+H+N IG AA L LEP N + YI +S + E G +E ++R + +
Sbjct: 593 SLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRE 652
Query: 709 AGKLPGCSWIEVQN 722
+ G S + V+N
Sbjct: 653 LMREIGYSSVVVKN 666
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 193/426 (45%), Gaps = 19/426 (4%)
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A+ ++ L L + L + +M + F E+ V + N + + SG+L
Sbjct: 4 AQALYFLRRTTTLAQHLCSLTPFIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNL 62
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-PC---KNVVSWNAMIAAY 295
SA + F+++ + V++ ++ G +R+G A L+ M C ++ ++ ++++
Sbjct: 63 LSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVC 122
Query: 296 AQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET 351
+ +L E +++ ++ + S ++ Y + +D A +++++M +++A
Sbjct: 123 SDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCN 182
Query: 352 ALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
L+ QTG +++ ++ ++ + + MI G + E L + K
Sbjct: 183 LLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
Query: 407 ----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
N N ++ Y+ G + + F A+ E++++SWNS+++ D+L
Sbjct: 243 GWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDL 302
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYA 521
M GK+P F Q G Q+H Y+LK G+ ++ L V +ALI MY
Sbjct: 303 FSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYG 362
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
KC +E++ ++ ++ C++L NSL++ G + + F M+ E D+VT
Sbjct: 363 KCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLST 422
Query: 582 MLSACS 587
+L A S
Sbjct: 423 VLKALS 428
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 196/434 (45%), Gaps = 55/434 (12%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
++ RV S N+ ++++ ++A + A +LFD+M RNL N ++ +
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 112 SMVEEASKLFDVMPE-------RDNFSWALMITCYTRKGKLEKARELLELVPDKLESACW 164
E+ +LF+V ++ ++ MI + + + ++L LV ++S W
Sbjct: 192 G---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLV---VKSG-W 244
Query: 165 --------NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
N ++ Y+ G S + + FN +P KD++S+NS+++ G + +L F
Sbjct: 245 NISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFS 304
Query: 217 KM----AEKNVVSWNLMVSGFVNSGDLSSARQL--------FEKIPNPNAVSWVTMLCGF 264
KM ++ + ++ + D+ S +Q+ F+ + + M +
Sbjct: 305 KMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM---Y 361
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWS 320
+ I + L+ S+PC N+ N+++ + + +++F + + D V+ S
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLS 421
Query: 321 TIINGYIRVGKLDEAREVYNQMPC--------KDIAAETALMSGLIQTGRVDEASKMFNQ 372
T++ L E+ + C D+A +L+ ++G+ + + K+F++
Sbjct: 422 TVLKALSL--SLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDE 479
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSA 428
L T + C S+I G+ ++G + + + R+M + N V+ +++SG + +G ++
Sbjct: 480 LDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEG 539
Query: 429 ENIFQAMEERNIVS 442
E IF ++E + +S
Sbjct: 540 ELIFDSLESKYGIS 553
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 22/280 (7%)
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
+ F + RMD + + P + N I ++G + SA F M R++V++N
Sbjct: 23 LTPFIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYN 81
Query: 445 SLITGFLQNSLYFDALKSLVL---MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
LI+G NS Y +L+++ L M G + STF + G Q+H +
Sbjct: 82 LLISG---NSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRV 138
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
+ G+ ++FV +AL+ +YA V+ A ++F + +L N L+ + G + F
Sbjct: 139 ISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLF 198
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED-------FAIEPLAEH 614
+ + +M E V + +T+ M+ CSH L +G L +V+ F L ++
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDY 258
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
YS DL G M +FN V DV + W S++ C
Sbjct: 259 YSACGDLSGSM----RSFNAVPEKDVIS----WNSIVSVC 290
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 162/363 (44%), Gaps = 44/363 (12%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
++F N + + G + ++R F+ K+++++NS++SV A G + D+ LF KM
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 94 ------SQRNLVSWNTMIAGYLHNSMVEEASKL--------FDVMPERDNFSWALMITCY 139
S R +S+ + NS ++ ++ FDV + +I Y
Sbjct: 308 FWGKRPSIRPFMSFLNFCS---RNSDIQSGKQIHCYVLKMGFDVSSLH---VQSALIDMY 361
Query: 140 TRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSY 195
+ +E + L + +P L C NS++ G D ++F LM + D V+
Sbjct: 362 GKCNGIENSALLYQSLP-CLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTL 420
Query: 196 NSMLAGYTQNGKMGL-ALHFFEKMAEKNVVSWNLMVS-----GFVNSGDLSSARQLFEKI 249
+++L + + L + A K+ + ++ VS + SG +R++F+++
Sbjct: 421 STVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDEL 480
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAV 305
PN +++ G+AR+G T+ ++ M N+ V+ ++++ + ++E
Sbjct: 481 DTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGE 540
Query: 306 KLFIKLPHKDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
+F L K G+S ++ +++ R G +++A + Q A+ S L+Q+
Sbjct: 541 LIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD---ADCVAWSSLLQS 597
Query: 361 GRV 363
R+
Sbjct: 598 CRI 600
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 202/416 (48%), Gaps = 13/416 (3%)
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTG----RVDEASKM 369
K ++T+I Y+ G+ + ++ M + LI+ V +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 370 FNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQM 425
Q R D S + + + G ++ + +F + V+ N+++ + G+M
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL---KSLVLMGREGKKPDQSTFXXXX 482
D A FQ M ++VSW ++I GF + L+ AL ++ R P+++TF
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 483 XXXXXXXX--XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
++G Q+H Y++ I + AL+ MY K G +E A +F I
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+ +WN++IS A NG +A + F+ M S V P+ +T + +L+AC+ + L + G+ LF
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 601 CMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
+ ++ I P +EHY C+VDL+GR G L +A N ++ + + +A + G+LLGAC++H+N
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 661 EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
E+G +L L+P + Y+ LS +A W E E++R M + K+P S
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 25/269 (9%)
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM--------VSGFVNSGDLSSARQLF 246
YN+++ Y G+ +L F M +V NL S F S ++ Q
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 247 EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--PCKNVVSWNAMIAAYAQDLQIDEA 304
++ + + + + G + +R++FD + PC VV+ N+++ A ++ ++D A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPC--VVACNSLLDACGRNGEMDYA 171
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA----ETALMSGLIQT 360
+ F ++P D VSW+T+ING+ + G +A V+ +M + A E +S L
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 361 GRVDEAS-----KMFNQLSTRDTICWNSMIAG----FCQSGRMDEALDLFRQMPKKNSVS 411
D+ ++ + +++ I ++ + ++G ++ AL +F Q+ K +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERNI 440
WN +IS A G+ A +F+ M+ +
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYV 320
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 109/229 (47%), Gaps = 22/229 (9%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
S + + + G + +R++FD + +V+ N+++ N ++ A + F MP D
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 131 SWALMITCYTRKGKLEKA---------RELLELVPDKLESACWNSVIAGYAK--KGQFSD 179
SW +I +++KG KA E + P++ A + SV++ A +G
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNE---ATFVSVLSSCANFDQGGIRL 241
Query: 180 AEKVFNLMPVKDLVSYNSMLAG----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
+++ + K+++ ++ Y + G + +AL F+++ +K V +WN ++S +
Sbjct: 242 GKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS 301
Query: 236 SGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+G A ++FE + +PN ++ + +L AR + +LF S+
Sbjct: 302 NGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 22/263 (8%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
S + Y + G + K+F+ + +V+ NS+L +NG+M A +F++M +VV
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 225 SWNLMVSGFVNSGDLSSARQLF-EKIPN------PNAVSWVTML--CGFARHGKITEARR 275
SW +++GF G + A +F E I N PN ++V++L C G I ++
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 276 LFDSMPCKNVVSWNAMIAA----YAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGK 331
+ + K ++ + A Y + ++ A+ +F ++ K +W+ II+ G+
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 332 LDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTIC-----WN 382
+A E++ M + A+++ ++ VD ++F+ + + I +
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYG 364
Query: 383 SMIAGFCQSGRMDEALDLFRQMP 405
++ ++G + +A + + +P
Sbjct: 365 CVVDLIGRAGLLVDAANFIQSLP 387
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 176/331 (53%), Gaps = 16/331 (4%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN---SLYFDALKSLVLMGRE 469
N +I Y + A +F M ERN+VSWNS++T ++N +L F+ ++
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI----- 206
Query: 470 GKK--PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
GK+ PD++T +G +H ++ + + AL+ MYAK G +E
Sbjct: 207 GKRFCPDETTMVVLLSACGGNL--SLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV-PDQVTFIGMLSAC 586
A VF + ++ +W+++I G A G+A EA + F +M+ E V P+ VTF+G+L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
SH GL + G F M + I+P+ HY +VD+LGR GRL EA++ ++ M + +A +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 647 WGSLLGACRVHKNLE---IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
W +LL AC +H + + IGE RL ELEP + N + ++N AEA W E +R +
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDSGR 734
M++ + K+ G S +E+ F S R
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRFFSGYDPR 475
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 4/236 (1%)
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
+S + A + A + + +WN L G+ + +++ M R G KP++
Sbjct: 54 VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNK 113
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA 535
TF G Q+ +LK G+ D++V N LI +Y C + A +VF
Sbjct: 114 LTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE 173
Query: 536 IECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG 595
+ +++SWNS+++ NG F+ F +M+ + PD+ T + +LSAC L+
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG-GNLSLGK 232
Query: 596 LDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
L + MV + + + LVD+ + G LE A V M V N W +++
Sbjct: 233 LVHSQVMVRELELN--CRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMI 285
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 189/432 (43%), Gaps = 71/432 (16%)
Query: 34 KHVFNKNQQIIHLGKLGK----VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQL 89
KH+ + QI HL L + E VRV S ++ K+L AR L
Sbjct: 27 KHLLQIHGQI-HLSSLQNDSFIISELVRVSSLSLAKDLAF----------------ARTL 69
Query: 90 FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKG 143
S +WN + GY + E+ ++ M P + F + L+ C + G
Sbjct: 70 LLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPF-LLKACASFLG 128
Query: 144 KLEKAREL-LELVPDKLESACW--NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLA 200
L R++ +E++ + + N++I Y + SDA KVF+ M +++VS+NS++
Sbjct: 129 -LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 201 GYTQNGKMGLALHFFEKMAEKNVVS--WNLMVSGFVNSGDLSSAR----QLFEKIPNPNA 254
+NGK+ L F +M K ++V G+LS + Q+ + N
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNC 247
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK 314
++ +A+ G + AR +F+ M KNV +W+AMI AQ +EA++LF K+ +
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 315 DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
S++ Y+ ++ TG VD+ K F+++
Sbjct: 308 -----SSVRPNYVTF---------------------LGVLCACSHTGLVDDGYKYFHEME 341
Query: 375 TRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSA 428
I + +M+ ++GR++EA D ++MP + ++V W T++S + D
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDD- 400
Query: 429 ENIFQAMEERNI 440
E I + +++R I
Sbjct: 401 EGIGEKVKKRLI 412
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 24/239 (10%)
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRL---- 276
+WN++ G+ +S + ++ ++ PN +++ +L A +T R++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 277 ----FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKL 332
FD +V N +I Y + +A K+F ++ ++ VSW++I+ + GKL
Sbjct: 140 LKHGFDF----DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 333 DEAREVYNQMP----CKDIAAETALMS---GLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
+ E + +M C D L+S G + G++ + M +L + +++
Sbjct: 196 NLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRL-GTALV 254
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
+ +SG ++ A +F +M KN +W+ MI G AQ G + A +F M + + V N
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 265/587 (45%), Gaps = 72/587 (12%)
Query: 114 VEEASKLFDVMPER------DNFSWALMITCYTRKGKLEKARELLELVPDKLESACW--N 165
+E A + D + +R FS AL+ C RK L + + + + LES +
Sbjct: 92 LEVALTILDYLEQRGIPVNATTFS-ALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRT 150
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGL--ALHFFEKMAEK-- 221
++ Y G DA+KVF+ ++ S+N++L G +GK L F +M E
Sbjct: 151 KLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGV 210
Query: 222 --NVVSWNLMVSGFVNSGDLSSARQLFE-KIPNP--NAVSWVTMLCG-FARHGKITEARR 275
NV S + + F + L + I N N+V T L + + GK+ ARR
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARR 270
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-----HKDGVSWSTIINGYIRVG 330
+FD + +++V W AMIA A + + EA+ LF + + + V +TI+ V
Sbjct: 271 VFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVK 330
Query: 331 KLDEAREVYNQ-MPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMI 385
L +EV+ + K+ + + SGLI + G + ++F R+ I W +++
Sbjct: 331 ALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALM 390
Query: 386 AGFCQSGRMDEAL--------DLFRQ---------------------------------M 404
+G+ +GR D+AL + FR +
Sbjct: 391 SGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL 450
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
P + V+ +++ Y++ G + +F +E+RN+ +W ++I +++N ++
Sbjct: 451 PNVSLVT--SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
LM +PD T ++G +LH +ILK + + FVS +I MY KCG
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+ SA F A+ ++W ++I Y N +A F+QM+S P+ TF +LS
Sbjct: 569 DLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLS 628
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA 631
CS AG ++ F M+ + ++P EHYS +++LL R GR+EEA
Sbjct: 629 ICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 187/406 (46%), Gaps = 33/406 (8%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL 120
N + ++ S++ ++ K GK+ AR++FD++ +R++V W MIAG HN EA L
Sbjct: 243 NGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGL 302
Query: 121 FDVM--PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACW-------NSVIAGY 171
F M E+ + ++ T G ++ + E+ L+S + + +I Y
Sbjct: 303 FRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLY 362
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWN 227
K G + +VF ++ +S+ ++++GY NG+ AL M ++ +VV+
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 228 LMVSGFVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
++ + +++ + + PN +++ +++ G RLFD + +
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR 482
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTIINGYIRVGKLDEAREVY 339
NV +W AMI Y ++ + +++F + D V+ ++ + L +E++
Sbjct: 483 NVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELH 542
Query: 340 NQMPCKD------IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
+ K+ ++A M G + G + A+ F+ ++ + ++ W ++I + +
Sbjct: 543 GHILKKEFESIPFVSARIIKMYG--KCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 600
Query: 394 MDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
+A++ F QM + N+ ++ ++S +QAG +D A F M
Sbjct: 601 FRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/549 (19%), Positives = 231/549 (42%), Gaps = 77/549 (14%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL------ 109
V + N + N ++ ++ G + DA+++FD+ + N+ SWN ++ G +
Sbjct: 135 VHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKR 194
Query: 110 HNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSV-- 167
+ ++ +++ ++ + + +S + + + L R+ L+ +++ +NSV
Sbjct: 195 YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASAL---RQGLKTHALAIKNGLFNSVFL 251
Query: 168 ----IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+ Y K G+ A +VF+ + +D+V + +M+AG N + AL F M +
Sbjct: 252 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK 311
Query: 224 VSWN-------LMVSGFVNS---GDLSSARQLFEK--IPNPNAVSWVTMLCGFARHGKIT 271
+ N L V G V + G A L K + P S + L + + G +
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL--YCKCGDMA 369
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYI 327
RR+F +N +SW A+++ YA + + D+A++ + + + D V+ +T++
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Query: 328 RVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+ + + +E++ + +++ T+LM + G + ++F++L R+ W +
Sbjct: 430 ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTA 489
Query: 384 MIAGFCQSGRMDEALDLFRQM----PKKNSVSWN-------------------------- 413
MI + ++ + +++FR M + +SV+
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 414 ---------TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
+I Y + G + SA F A+ + ++W ++I + N L+ DA+
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFE 609
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL-IAMYAKC 523
M G P+ TF + +L+ + +L I + +C
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRC 669
Query: 524 GRVESAEQV 532
GRVE A+++
Sbjct: 670 GRVEEAQRL 678
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 56/346 (16%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLGK A + S + ++ +I ++ K G ++ R++F QRN +SW +++G
Sbjct: 333 KLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Query: 108 YLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLESAC 163
Y N ++A + M + D + A ++ +++ +E
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE------------- 439
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
I YA K F +P LV+ S++ Y++ G + F+++ ++NV
Sbjct: 440 ----IHCYALKNLF---------LPNVSLVT--SLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLC--------GFARHGK 269
+W M+ +V + DL + ++F + P+ + V +C G HG
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRV 329
I ++ F+S+P + +I Y + + A F + K ++W+ II Y
Sbjct: 545 IL--KKEFESIPFVSA----RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCN 598
Query: 330 GKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFN 371
+A + QM + TA++S Q G VDEA + FN
Sbjct: 599 ELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 226/481 (46%), Gaps = 63/481 (13%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N++I+ + G A KVF+ MP K+ V++ +M+ GY + G A FE + +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 225 SWNLMVSGFVNSGDLSSARQLFE----------KIPNPNAVSWVTMLCGFARHGKITEAR 274
N + FV +L S R FE K+ N + +++ +A+ G++T A
Sbjct: 181 FTNERM--FVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSAL 238
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK------LPHKDGVSWSTIINGYIR 328
R FD M K+V+SW A+I+A ++ +A+ +FI LP++ V +I+
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVC--SILKACSE 296
Query: 329 VGKLDEAREVYN----QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
L R+V++ +M D+ T+LM + G + + K+F+ +S R+T+ W S+
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 385 IAGFCQSGRMDEALDLFRQMPK----------------------------------KNSV 410
IA + G +EA+ LFR M + KNS+
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 411 SWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
N I Y + G+ A N+ Q + R++VSW ++I+G +AL L
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M +EG +P+ T+ +G +H K+ ++++FV +ALI MYAKCG
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
V A +VF ++ +L+SW ++I GYA NG+ EA K +M +E D F +LS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 586 C 586
C
Sbjct: 597 C 597
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 221/472 (46%), Gaps = 66/472 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDN 129
N++IS + G + AR++FD M ++N V+W MI GYL + +EA LF D +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 130 FSWALMITCY----TRKGKLEKARE----LLELVPDKLESACWNSVIAGYAKKGQFSDAE 181
F+ M C +R+ + E R+ ++++ L +S++ YA+ G+ + A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL--IVESSLVYFYAQCGELTSAL 238
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD--- 238
+ F++M KD++S+ ++++ ++ G A+ F M + V + +
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 239 -LSSARQ----LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
L RQ + +++ + +++ +A+ G+I++ R++FD M +N V+W ++IA
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIA 358
Query: 294 AYAQDLQIDEAVKLF--IKLPH--KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
A+A++ +EA+ LF +K H + ++ +I+ VG L +E++ Q+ I
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK 418
Query: 350 ETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM- 404
+ S L+ + G +A + QL +RD + W +MI+G G EALD ++M
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 405 ---------------------------------PKKNSVSWNT-----MISGYAQAGQMD 426
KKN N +I YA+ G +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
A +F +M E+N+VSW ++I G+ +N +ALK + M EG + D F
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIF 590
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 57/444 (12%)
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWS----- 320
R G + AR++FDSMP KN V+W AMI Y + DEA LF K G+ ++
Sbjct: 129 RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYV-KHGIRFTNERMF 187
Query: 321 -TIINGYIRVGKLDEAREVYNQM---PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
++N R + + R+V+ M ++ E++L+ Q G + A + F+ + +
Sbjct: 188 VCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEK 247
Query: 377 DTICWNSMIAGFCQSGRMDEALDLF----------------------------------- 401
D I W ++I+ + G +A+ +F
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVH 307
Query: 402 ----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
++M K + +++ YA+ G++ +F M RN V+W S+I +
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGE 367
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
+A+ +M R + T +G +LH I+K+ ++++ + L+
Sbjct: 368 EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
+Y KCG A V + D++SW ++ISG + G+ EA K+M+ E V P+
Sbjct: 428 WLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPF 487
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
T+ L AC+++ G + ++ A+ + S L+ + + G + EAF V
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDS 546
Query: 638 MDVKANAGLWGSLL------GACR 655
M K N W +++ G CR
Sbjct: 547 MPEK-NLVSWKAMIMGYARNGFCR 569
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 10/341 (2%)
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
+I+ +R+G L AR+V++ MP K+ TA++ G ++ G DEA +F
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 382 NS-MIAGFCQSGRMDEALDLFRQMPKK-------NSVSWNTMISGYAQAGQMDSAENIFQ 433
N M +L RQ+ N + ++++ YAQ G++ SA F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
MEE++++SW ++I+ + A+ + M P++ T +
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H ++K D+FV +L+ MYAKCG + +VF + + ++W S+I+ +A
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G+ EA F+ M ++ + +T + +L AC G G +L ++++ +IE
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVY 421
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
S LV L + G +AFNV++ + + + W +++ C
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGC 461
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 157/299 (52%), Gaps = 20/299 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V I ++ S++ ++AK G+ISD R++FD MS RN V+W ++IA + EEA
Sbjct: 310 VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 118 SKLFDVMPERDNFSWALMITCYTRK----GKLEKAREL-LELVPDKLESACW--NSVIAG 170
LF +M R + L + R G L +EL +++ + +E + ++++
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSW 226
Y K G+ DA V +P +D+VS+ +M++G + G AL F ++M E N ++
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPC 282
+ + NS L R + +A+S V ++ +A+ G ++EA R+FDSMP
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEARE 337
KN+VSW AMI YA++ EA+KL ++ + D ++TI++ + +LDEA E
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI-ELDEAVE 607
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 176/363 (48%), Gaps = 25/363 (6%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL+ +S++ +A+ G+++ A + FD M +++++SW +I+ +A +F M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 126 ER----DNFSWALMITCYTRKGKLEKARELLELVPDKL---ESACWNSVIAGYAKKGQFS 178
+ F+ ++ + + L R++ LV ++ + S++ YAK G+ S
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-- 236
D KVF+ M ++ V++ S++A + + G A+ F M +++++ NL V + +
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 237 --GDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
G L ++L +I N T++ + + G+ +A + +P ++VVSW A
Sbjct: 397 SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 291 MIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYN----Q 341
MI+ + EA+ F+K ++GV ++S+ + L R +++
Sbjct: 457 MISGCSSLGHESEALD-FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
++ +AL+ + G V EA ++F+ + ++ + W +MI G+ ++G EAL L
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 402 RQM 404
+M
Sbjct: 576 YRM 578
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 33/378 (8%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI--KLPHK---DGVSWSTI 322
G+ A +F+ + + +WN MI + + + + EA+ LFI + H+ D ++ +
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
I + + +V+ A+ +G FN D N
Sbjct: 126 IKACLASSSIRLGTQVHG----------LAIKAGF------------FN-----DVFFQN 158
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
+++ + + G+ D +F +MP ++ VSW TM+ G Q+DSAE +F M RN+VS
Sbjct: 159 TLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVS 218
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
W ++IT +++N +A + M + KP++ T +G +H+Y
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
K+G++ D F+ ALI MY+KCG ++ A +VF ++ L +WNS+I+ ++G EA
Sbjct: 279 KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALS 338
Query: 563 AFKQMLSEEVV-PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
F++M E V PD +TF+G+LSAC++ G GL F M++ + I P+ EH +C++ L
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQL 398
Query: 622 LGRMGRLEEAFNVVRGMD 639
L + +E+A N+V MD
Sbjct: 399 LEQALEVEKASNLVESMD 416
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 168/370 (45%), Gaps = 40/370 (10%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSM----VEEASKLFDVMPERDNFSWALMITC 138
S +Q+ K+ + NL + ++ + S + AS +F+ + F+W LMI
Sbjct: 33 FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRS 92
Query: 139 YTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
+ K RE L L ++ + + QF +K +K ++ +S+
Sbjct: 93 LSVN---HKPREALLLF-----------ILMMISHQSQF---DKFTFPFVIKACLASSSI 135
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV 258
G TQ + + FF +V N ++ + G S R++F+K+P + VSW
Sbjct: 136 RLG-TQVHGLAIKAGFF-----NDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWT 189
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD-GV 317
TML G + ++ A +F+ MP +NVVSW AMI AY ++ + DEA +LF ++ D
Sbjct: 190 TMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP 249
Query: 318 SWSTIIN---GYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMF 370
+ TI+N ++G L R V++ D TAL+ + G + +A K+F
Sbjct: 250 NEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVF 309
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMISGYAQAGQM 425
+ + + WNSMI G +EAL LF +M + +++++ ++S A G +
Sbjct: 310 DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
Query: 426 DSAENIFQAM 435
F M
Sbjct: 370 KDGLRYFTRM 379
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG-REGKKP 473
+IS + G+ A +F ++ + +WN +I N +AL +LM +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR-------- 525
D+ TF ++G Q+H +K+G+ ND+F N L+ +Y KCG+
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 526 -----------------------VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
++SAE VF + +++SW ++I+ Y N EAF+
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP--LAEHY--SCL 618
F++M ++V P++ T + +L A + G + G V D+A + + + + + L
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR-----WVHDYAHKNGFVLDCFLGTAL 292
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
+D+ + G L++A V M K+ A W S++ + VH
Sbjct: 293 IDMYSKCGSLQDARKVFDVMQGKSLAT-WNSMITSLGVH 330
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ ++ K GK R++FDKM R++VSW TM+ G + NS ++ A +F+ MP R+
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 131 SWALMITCYTRKGKLEKARELL------ELVPD------------KLESACWNSVIAGYA 172
SW MIT Y + + ++A +L ++ P+ +L S + YA
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
K F V D +++ Y++ G + A F+ M K++ +WN M++
Sbjct: 278 HKNGF-----------VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITS 326
Query: 233 FVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCK 283
G A LFE++ P+A+++V +L A G + + R F M
Sbjct: 327 LGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGIS 386
Query: 284 NVVSWNA-MIAAYAQDLQIDEAVKL 307
+ NA MI Q L++++A L
Sbjct: 387 PIREHNACMIQLLEQALEVEKASNL 411
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 16/247 (6%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
I++ + H L I + VF +N + K GK + +VF +++V++ +M+
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNF 130
N ++ A +F++M RN+VSW MI Y+ N +EA +LF DV P + F
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP--NEF 252
Query: 131 SWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLM 187
+ ++ T+ G L R + + L+ ++I Y+K G DA KVF++M
Sbjct: 253 TIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVNSGDLSSA 242
K L ++NSM+ +G AL FE+M E + +++ ++S N+G++
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Query: 243 RQLFEKI 249
+ F ++
Sbjct: 373 LRYFTRM 379
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 143/344 (41%), Gaps = 67/344 (19%)
Query: 63 IHKNLVTYN---------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM 113
IH ++ +N +ISV + G+ A +F+++ + +WN MI N
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHK 98
Query: 114 VEEASKLFDVM-----PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVI 168
EA LF +M + D F++ +I + ++ L +++ +N V
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA---IKAGFFNDVF 155
Query: 169 AG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
Y K G+ KVF+ MP + +VS+ +ML G N ++ A F +M +N
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN 215
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCG--------------- 263
VVSW M++ +V + A QLF ++ PN + V +L
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 264 --------------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDE 303
+++ G + +AR++FD M K++ +WN+MI + +E
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 304 AVKLFIKLP-----HKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
A+ LF ++ D +++ +++ G + + + +M
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 263/527 (49%), Gaps = 61/527 (11%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L ++G VE A V+ + N+ T N M++ K+GK+ ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ ++V++NT+I+ Y ++EEA +L + MP + +++ +I + GK E+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 148 ARELLE------LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNS 197
A+E+ L PD S + S++ KKG + EKVF+ M V DLV ++S
Sbjct: 324 AKEVFAEMLRSGLSPD---STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 198 MLAGYTQNGKMGLALHFFEKMAEKNVVS----WNLMVSGFVNSGDLSSARQLFEKIPNP- 252
M++ +T++G + AL +F + E ++ + +++ G+ G +S A L ++
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 253 ---NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAV 305
+ V++ T+L G + + EA +LF+ M + + + +I + + + A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 306 KLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGL 357
+LF K+ K D V+++T+++G+ +VG +D A+E++ M K+I + + L++ L
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 358 IQTGRVDEASKMFNQLSTRDT-----ICWNSMIAGFCQSGRMDEALDLFRQMPKK----N 408
G + EA ++++++ +++ IC NSMI G+C+SG + +M + +
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMIC-NSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEER------NIVSWNSLITGFLQNSLYFDALKS 462
+S+NT+I G+ + M A + + MEE ++ ++NS++ GF + + +A
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
L M G PD+ST+ ++H+ +L+ G+ D
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/598 (20%), Positives = 266/598 (44%), Gaps = 73/598 (12%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS------------------ 100
F N H +L + ++MI + ++G++SDA+ +M +R+ VS
Sbjct: 106 FPNFKHTSL-SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 101 ---WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL-----MITCYTRKGKLEKARELL 152
++ +I Y+ + EA + F ++ + F+ ++ +I R G +E A +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 153 ELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
+ + + N ++ K G+ + + K D+V+YN++++ Y+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 206 GKMGLALHFFEKMAEKN----VVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSW 257
G M A M K V ++N +++G G A+++F ++ +P++ ++
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVS----WNAMIAAYAQDLQIDEAVKLFIKLPH 313
++L + G + E ++F M ++VV +++M++ + + +D+A+ F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 314 ----KDGVSWSTIINGYIRVGKLDEAREVYNQM---PCK-DIAAETALMSGLIQTGRVDE 365
D V ++ +I GY R G + A + N+M C D+ ++ GL + + E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 366 ASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMIS 417
A K+FN+++ R D+ +I G C+ G + A++LF++M +K + V++NT++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 418 GYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
G+ + G +D+A+ I+ M + I +S++ L+ +A + M + KP
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
G E ++ G++ D N LI + + + A +
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 534 TAIE------CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E D+ ++NS++ G+ EA ++M+ V PD+ T+ M++
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/558 (22%), Positives = 246/558 (44%), Gaps = 88/558 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPE 126
N++I + G + A ++ ++S+ N+ + N M+ + +E+ + E
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 127 R----DNFSWALMITCYTRKGKLEKARELLELVPDKLESA---CWNSVIAGYAKKGQFSD 179
+ D ++ +I+ Y+ KG +E+A EL+ +P K S +N+VI G K G++
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 180 AEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----WNLM 229
A++VF L P D +Y S+L + G + F M ++VV ++ M
Sbjct: 324 AKEVFAEMLRSGLSP--DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM---PC 282
+S F SG+L A F + P+ V + ++ G+ R G I+ A L + M C
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 283 K-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEARE 337
+VV++N ++ + + EA KLF ++ + D + + +I+G+ ++G L A E
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 338 VYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFC 389
++ +M K D+ L+ G + G +D A +++ + +++ I ++ ++ C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 390 QSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERNIV---- 441
G + EA ++ +M KN + N+MI GY ++G E+ + M V
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
S+N+LI GF++ A + M E
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEE-------------------------------- 649
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA-IE---CVDLISWNSLISGYALNGYA 557
+ G + D+F N+++ + + +++ AE V IE D ++ +I+G+
Sbjct: 650 -QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 558 IEAFKAFKQMLSEEVVPD 575
EAF+ +ML PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 162/406 (39%), Gaps = 72/406 (17%)
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK------NVVSWNAMIAAYAQDLQIDEA 304
NP AV V C +T +R D + +S +AMI + ++ +A
Sbjct: 77 NPLAVVEVLYRC----RNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDA 132
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD 364
+++ + GVS I+N LD ++ D + L+ +Q ++
Sbjct: 133 QSCLLRMIRRSGVSRLEIVNS------LDST---FSNCGSNDSVFD-LLIRTYVQARKLR 182
Query: 365 EASKMFNQLSTRDTI----CWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA + F L ++ N++I + G ++ A +++++ + N + N M+
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 417 SGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
+ + G+M+ ++E+ +IV++N+LI+ + L +A + + M +G
Sbjct: 243 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P T+ N +I K G+ E A++V
Sbjct: 303 PGVYTY-----------------------------------NTVINGLCKHGKYERAKEV 327
Query: 533 FTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
F + D ++ SL+ G +E K F M S +VVPD V F M+S +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
+G ++ L F V++ + P Y+ L+ R G + A N+
Sbjct: 388 SGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/656 (22%), Positives = 301/656 (45%), Gaps = 83/656 (12%)
Query: 43 IIHLGKLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ--- 95
I LGK G+V A +F+ + ++ +Y S+IS FA +G+ +A +F KM +
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 96 -RNLVSWNTMI-----AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
L+++N ++ G N + K+ D +++ +ITC R ++A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 150 ELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGY 202
++ E + + +N+++ Y K + +A KV N M + +V+YNS+++ Y
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 203 TQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNA 254
++G + A+ +MAEK +V ++ ++SGF +G + SA +FE++ N PN
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
++ + + GK TE ++FD + ++V+WN ++A + Q+ E +F +
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 311 L------PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD 364
+ P ++ +++T+I+ Y R G ++A VY +M L +G+
Sbjct: 480 MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRM----------LDAGV------- 520
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYA 420
T D +N+++A + G +++ + +M K N +++ +++ YA
Sbjct: 521 ----------TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 421 ---QAGQMDS-AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
+ G M S AE ++ + E V +L+ + L +A ++ + G PD +
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T N + +Y+ + G+ + N+L+ M+++ +E++ I
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 537 EC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
D+IS+N++I Y N +A + F +M + +VPD +T+ + + + +
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAG 645
+ + + + M++ P Y+ +VD ++ R +EA +R +D A G
Sbjct: 751 EEAIGVVRYMIKH-GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG 805
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 193/415 (46%), Gaps = 54/415 (13%)
Query: 264 FARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG--- 316
+ G+++ A +F+ + +V S+ ++I+A+A + EAV +F K+ +DG
Sbjct: 183 LGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM-EEDGCKP 241
Query: 317 --VSWSTIINGYIRVGKL-DEAREVYNQMPCKDIAAETALMSGLIQTGRV----DEASKM 369
++++ I+N + ++G ++ + +M IA + + LI + EA+++
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 370 FNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQM 425
F ++ + D + +N+++ + +S R EA+ + +M +++G++ +
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM----------VLNGFSPS--- 348
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
IV++NSLI+ + ++ + +A++ M +G KPD T+
Sbjct: 349 --------------IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DL 541
+ + E + +G ++ NA I MY G+ ++F I D+
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
++WN+L++ + NG E FK+M VP++ TF ++SA S G Q + +++
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLLGA 653
M+ D + P Y+ ++ L R G E++ V+ M+ K N + SLL A
Sbjct: 515 ML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 168/416 (40%), Gaps = 78/416 (18%)
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
++S L + GRV A+ MFN L GF +LD++ S+
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQE----------DGF--------SLDVY---------SY 211
Query: 413 NTMISGYAQAGQMDSAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLV-LMG 467
++IS +A +G+ A N+F+ MEE ++++N ++ F + ++ + SLV M
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
+G PD T+ Q Q+ E + +G+ D NAL+ +Y K R +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 528 SAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
A +V + ++++NSLIS YA +G EA + QM + PD T+ +L
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDV--- 640
S AG + +F+ M + +P ++ + + G G+ E + ++V
Sbjct: 392 SGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 641 KANAGLWGSLLGACRVHK-NLEI-GEFAAMRLSELEPH---------------------- 676
+ W +LL + + E+ G F M+ + P
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 677 ------------NASNYITLSNMHAEAGRWEEVERLRVLMRDKR--AGKLPGCSWI 718
+ S Y T+ A G WE+ E++ M D R +L CS +
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 237/463 (51%), Gaps = 53/463 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLF 121
N +T++++I+ G++S+A +L D+M + +L++ NT++ G + EA L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 122 DVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKK 174
D M E + ++ ++ + G+ A ELL + + KL++ ++ +I G K
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 175 GQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW 226
G +A +FN M +K ++++YN ++ G+ G+ M ++ NVV++
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
++++ FV G L A +L +++ + P+ +++ +++ GF + + +A ++ D M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDE 334
K N+ ++N +I Y + +ID+ ++LF K+ + D V+++T+I G+ +GKL+
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 335 AREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIA 386
A+E++ +M + +I L+ GL G ++A ++F ++ D +N +I
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 387 GFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV- 441
G C + ++D+A DLF +P K ++N MI G + G + AE +F+ MEE
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 442 ---SWNSLITGFLQNSLYFDALKSLVL---MGREGKKPDQSTF 478
++N LI L + DA KS+ L + R G D ST
Sbjct: 577 DGWTYNILIRAHLGDG---DATKSVKLIEELKRCGFSVDASTI 616
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 229/495 (46%), Gaps = 41/495 (8%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSAR 243
P+ ++ ++ + + + + L L ++M K N+ + ++M++ F L A
Sbjct: 84 PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 244 QLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIA 293
KI PN +++ T++ G G+++EA L D M P ++++ N ++
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP--DLITINTLVN 201
Query: 294 AYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ EA+ L K+ + V++ ++N + G+ A E+ +M ++I
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 350 E----TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLF 401
+ + ++ GL + G +D A +FN++ T + I +N +I GFC +GR D+ L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 402 RQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQN 453
R M K+ N V+++ +I + + G++ AE + + M R I +++ SLI GF +
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ A + + LM +G P+ TF G +L + G + D
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 514 NALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
N LI + + G++ A+++F + +++++ L+ G NG + +A + F+++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
++ D + ++ +A + DLF C + ++P + Y+ ++ L + G L
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 630 EAFNVVRGMDVKANA 644
EA + R M+ +A
Sbjct: 561 EAELLFRKMEEDGHA 575
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 159/323 (49%), Gaps = 41/323 (12%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----N 97
L K G ++ A +F+ I N++TYN +I F G+ D +L M +R N
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE 153
+V+++ +I ++ + EA +L M R D ++ +I + ++ L+KA ++++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 154 LVPDKLESAC------WNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYT 203
L+ K C +N +I GY K + D ++F M ++ D V+YN+++ G+
Sbjct: 393 LMVSK---GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 204 QNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAV 255
+ GK+ +A F++M + N+V++ +++ G ++G+ A ++FEKI +
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
+ ++ G K+ +A LF S+P K V ++N MI + + EA LF K+
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 312 PH----KDGVSWSTIINGYIRVG 330
DG +++ +I ++ G
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDG 592
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 183/399 (45%), Gaps = 86/399 (21%)
Query: 18 KMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTI----HKNLVTYNSM 73
+M M HK + +I N + L GK EA+ + + N VTY +
Sbjct: 183 RMVEMGHKPDLITI--------NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 74 ISVFAKNGKISDARQLFDKMSQR------------------------------------- 96
++V K+G+ + A +L KM +R
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 97 --NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARE 150
N++++N +I G+ + ++ +KL M +R + +++++I + ++GKL +A E
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 151 LLE------LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLA 200
L + + PD + + S+I G+ K+ A ++ +LM K ++ ++N ++
Sbjct: 355 LHKEMIHRGIAPDTIT---YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 201 GYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFE-----KIPN 251
GY + ++ L F KM+ + V V++N ++ GF G L+ A++LF+ K+P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP- 470
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKL 307
PN V++ +L G +G+ +A +F+ + ++ +N +I ++D+A L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 308 FIKLPH---KDGV-SWSTIINGYIRVGKLDEAREVYNQM 342
F LP K GV +++ +I G + G L EA ++ +M
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 231/436 (52%), Gaps = 49/436 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +IS+A L D+M Q N V++NT+I G +LHN EA L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK-ASEAVAL 207
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPDKLES--ACWNSVIAGYAK 173
D M R D F++ ++ ++G ++ A LL ++ K+E+ + ++I
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
+DA +F M K ++V+YNS++ G+ A M E+ NVV+
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++ ++ FV G L A +L++++ +P+ ++ +++ GF H ++ EA+ +F+ M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLD 333
K NVV++N +I + + +++E ++LF ++ + + V+++T+I G + G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A++++ +M DI + L+ GL + G++++A +F L D +N MI
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
G C++G++++ DLF + K N + + TMISG+ + G + A+ +F+ M+E +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 442 ----SWNSLITGFLQN 453
++N+LI L++
Sbjct: 568 PNSGTYNTLIRARLRD 583
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 231/521 (44%), Gaps = 44/521 (8%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWN 227
+ DA +F M P+ +V +N +L+ + K L + E+M ++ S+N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC- 282
++++ F L A + K+ P+ V+ ++L G+ +I+EA L D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 283 ---KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEA 335
N V++N +I + EAV L ++ + D ++ T++NG + G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 336 REVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAG 387
+ +M I A+ T ++ L V++A +F ++ + + + +NS+I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 388 FCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----N 439
C GR +A L M ++ N V+++ +I + + G++ AE ++ M +R +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
I +++SLI GF + +A LM + P+ T+ + G +L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNG 555
+ + G + + N LI + G + A+++F + D+I+++ L+ G G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
+A F+ + ++ PD T+ M+ AG G DLF C + ++P Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPNVIIY 538
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLLGA 653
+ ++ R G EEA + R M N+G + +L+ A
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 202/437 (46%), Gaps = 66/437 (15%)
Query: 51 KVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV R+ + +L TY ++++ K G I A L KM + ++V +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPD 157
T+I + V +A LF M + + ++ +I C G+ A LL +++
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 158 KLES--ACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
K+ ++++I + K+G+ +AEK+++ M + D+ +Y+S++ G+ + ++ A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCG 263
H FE M K NVV++N ++ GF + + +LF ++ N V++ T++ G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
+ G A+++F M V D +++S ++
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGV---------------------------PPDIITYSILL 472
Query: 324 NGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR--- 376
+G + GKL++A V+ + DI ++ G+ + G+V++ +F LS +
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENI 431
+ I + +MI+GFC+ G +EA LFR+M + NS ++NT+I + G ++ +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 432 FQAMEERNIVSWNSLIT 448
+ M V S I+
Sbjct: 593 IKEMRSCGFVGDASTIS 609
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 180/354 (50%), Gaps = 40/354 (11%)
Query: 52 VEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
V +A+ +F+ I N+VTYNS+I G+ SDA +L M +R N+V+++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK- 158
+I ++ + EA KL+D M +R D F+++ +I + +L++A+ + EL+ K
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 159 --LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLAL 212
+N++I G+ K + + ++F M + L V+YN+++ G Q G +A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 213 HFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGF 264
F+KM +++++++++ G G L A +FE + P+ ++ M+ G
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 265 ARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV--- 317
+ GK+ + LF S+ K NV+ + MI+ + + +EA LF ++ +DG
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KEDGTLPN 569
Query: 318 --SWSTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTGRVDEA 366
+++T+I +R G + E+ +M C + A+ +++ ++ GR++++
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 151/296 (51%), Gaps = 33/296 (11%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+V N I L G+ +A R+ S+ I + N+VT++++I F K GK+ +A +L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRK 142
D+M +R ++ +++++I G+ + ++EA +F++M +D F ++ +I + +
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 143 GKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLM-----PVKDLVS 194
++E+ EL + + + +N++I G + G A+K+F M P D+++
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP-PDIIT 467
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
Y+ +L G + GK+ AL FE + E ++ ++N+M+ G +G + LF +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 251 ----NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQD 298
PN + + TM+ GF R G EA LF M N ++N +I A +D
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 231/540 (42%), Gaps = 111/540 (20%)
Query: 244 QLFEKIPNPNAVSWVTMLCGFARHGK----ITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
++ + P P+ V + +L A+ K I+ R+ + ++ S+N +I + +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 300 QIDEAVKLF---IKLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET---- 351
Q+ A+ + +KL ++ D V+ S+++NGY ++ EA + +QM + T
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
L+ GL + EA + +++ R D + +++ G C+ G +D AL L ++M K
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 407 ---KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDA 459
+ V + T+I ++ A N+F M+ + N+V++NSLI + DA
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
+ L M P+ TF +ALI
Sbjct: 310 SRLLSDMIERKINPNVVTF-----------------------------------SALIDA 334
Query: 520 YAKCGRVESAEQVFT-----AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
+ K G++ AE+++ +I+ D+ +++SLI+G+ ++ EA F+ M+S++ P
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 575 DQVTFIGMLSACSHAGLANQGLDL-----------------------------------F 599
+ VT+ ++ A +G++L F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 600 KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLL-GACR 655
K MV D + P YS L+D L + G+LE+A F ++ ++ + + ++ G C+
Sbjct: 454 KKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 656 VHKNLEIG--EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
K +E G F ++ L ++P N Y T+ + G EE + L M K G LP
Sbjct: 513 AGK-VEDGWDLFCSLSLKGVKP-NVIIYTTMISGFCRKGLKEEADALFREM--KEDGTLP 568
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/555 (23%), Positives = 253/555 (45%), Gaps = 118/555 (21%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEAS 118
I NL TY+ +I+ F + ++S A + KM + ++V+ N+++ G+ H + + +A
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
L M E + PD S +N++I G + + S
Sbjct: 172 SLVGQMVE-------------------------MGYQPD---SFTFNTLIHGLFRHNRAS 203
Query: 179 DAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMV 230
+A + + M VK DLV+Y ++ G + G + LAL +KM E VV +N ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
N +++ A LF ++ N PN V++ +++ +G+ ++A RL M + +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI- 322
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK- 345
+ + V++S +I+ +++ GKL EA ++Y++M +
Sbjct: 323 --------------------------NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 346 ---DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEAL 398
DI ++L++G R+DEA MF + ++D + +N++I GFC++ R+DE +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 399 DLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+LFR+M ++ N+V++ T+I G+ QA + D+A+ +F+ M
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS----------------- 459
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+G PD T+ + + EY+ +S D++ N
Sbjct: 460 --------------DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 515 ALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+I K G+VE +F ++ +++++ +++SG+ G EA F++M E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 571 EVVPDQVTFIGMLSA 585
+PD T+ ++ A
Sbjct: 566 GPLPDSGTYNTLIRA 580
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 254/554 (45%), Gaps = 86/554 (15%)
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R +V ++ +++ AK +F S E++ NL +L +Y+ +
Sbjct: 70 GDMVKSRPFPSIVE-------FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
+ + + ++ LAL KM E ++V+ N +++GF + +S A Q+ E
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVK 306
P++ ++ T++ G RH + +EA L D M K ++V++ ++ + ID A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 307 LFIKLPH---KDGVS-WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-- 360
L K+ + GV ++TII+ +++A ++ +M K I + LI+
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 361 --GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSV 410
GR +AS++ + + R + + ++++I F + G++ EA L+ +M K+ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLM 466
+++++I+G+ ++D A+++F+ M + N+V++N+LI GF +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-------------- 408
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
K+ D+ G +L + + G + + LI + +
Sbjct: 409 ---AKRVDE------------------GMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 527 ESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
++A+ VF + D+++++ L+ G NG A F+ + ++ PD T+ M
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ AG G DLF C + ++P Y+ ++ R G EEA + R M +
Sbjct: 508 IEGMCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 643 ---NAGLWGSLLGA 653
++G + +L+ A
Sbjct: 567 PLPDSGTYNTLIRA 580
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 178/362 (49%), Gaps = 57/362 (15%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+V N I L G+ +A R+ S+ I + N+VT++++I F K GK+ +A +L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRK 142
D+M +R ++ +++++I G+ + ++EA +F++M +D F ++ +I + +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 143 GKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSY 195
++++ EL + + + + ++I G+ + + +A+ VF M + D+++Y
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 196 NSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP- 250
+ +L G NGK+ AL FE + E ++ ++N+M+ G +G + LF +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 251 ---NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
PN V++ TM+ GF R G EA LF M +E
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK--------------------EEG--- 566
Query: 308 FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTGRVD 364
P D +++T+I ++R G + E+ +M C+ + A+ L++ ++ GR+D
Sbjct: 567 ----PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLD 622
Query: 365 EA 366
++
Sbjct: 623 KS 624
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 229/518 (44%), Gaps = 82/518 (15%)
Query: 269 KITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS-----W 319
K+ +A LF M P ++V ++ +++A A+ + D + L ++ + G+S +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTY 119
Query: 320 STIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
S +IN + R +L A V +M P DI +L++G R+ +A + Q+
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 374 S----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQM 425
D+ +N++I G + R EA+ L +M K V++ +++G + G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 426 DSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
D A ++ + ME E +V +N++I DAL M +G +P+ T+
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT-----AI 536
++L +++ ++ +ALI + K G++ AE+++ +I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+ D+ +++SLI+G+ ++ EA F+ M+S++ P+ VT+ ++ A ++G+
Sbjct: 358 D-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 597 DL-----------------------------------FKCMVEDFAIEPLAEHYSCLVDL 621
+L FK MV D + P YS L+D
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDG 475
Query: 622 LGRMGRLEEA---FNVVRGMDVKANAGLWGSLL-GACRVHKNLEIG--EFAAMRLSELEP 675
L G++E A F ++ ++ + + ++ G C+ K +E G F ++ L ++P
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK-VEDGWDLFCSLSLKGVKP 534
Query: 676 HNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
N Y T+ + G EE + L M+++ G LP
Sbjct: 535 -NVVTYTTMMSGFCRKGLKEEADALFREMKEE--GPLP 569
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 244/494 (49%), Gaps = 66/494 (13%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + + +ISDA L D+M + + ++ T+I G +LHN EA L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK-ASEAVAL 210
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLESA-------CWNSVIA 169
D M +R D ++ ++ ++G ++ A LL +K+E+A +N++I
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL----NKMEAARIKANVVIFNTIID 266
Query: 170 GYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---- 221
K A +F M K ++V+YNS++ G+ A M EK
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLF 277
NVV++N ++ F G L A +L E++ +P+ +++ ++ GF H ++ EA+++F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 278 DSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
M K N+ ++N +I + + ++++ V+LF ++ + + V+++TII G+ +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 330 GKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICW 381
G D A+ V+ QM DI + L+ GL G++D A +F L + +
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
N+MI G C++G++ EA DLF + K + V++NTMISG + A+++F+ M+E
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 441 V----SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
+ ++N+LI L++ + + + M G D ST V N
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL------------VTNM 614
Query: 497 LHEYILKSGYINDL 510
LH+ L ++N L
Sbjct: 615 LHDGRLDKSFLNML 628
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 208/443 (46%), Gaps = 68/443 (15%)
Query: 51 KVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV + + + +LVTY ++++ K G I A L +KM + N+V +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA 162
T+I VE A LF M + + P+ +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKG-------------------------IRPNVVT-- 295
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+NS+I G++SDA ++ + M K ++V++N+++ + + GK+ A E+M
Sbjct: 296 -YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 219 AEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
++++ +++NL+++GF L A+Q+F+ + + PN ++ T++ GF + ++
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTI 322
+ LF M + N V++ +I + Q D A +F ++ D +++S +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 323 INGYIRVGKLDEAREVYNQMPCKD----IAAETALMSGLIQTGRVDEASKMFNQLSTR-D 377
++G GKLD A ++ + + I ++ G+ + G+V EA +F LS + D
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD 534
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQ 433
+ +N+MI+G C + EA DLFR+M + NS ++NT+I + ++ + +
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 434 AMEERNIV---SWNSLITGFLQN 453
M V S SL+T L +
Sbjct: 595 EMRSSGFVGDASTISLVTNMLHD 617
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 126/578 (21%), Positives = 240/578 (41%), Gaps = 103/578 (17%)
Query: 82 KISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWA 133
K+ DA LF M + ++V +N +++ + E L + M D ++++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 134 LMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
+ I C+ R+ +L A +L K+ L D+V
Sbjct: 123 IFINCFCRRSQLSLALAVLA----------------------------KMMKLGYEPDIV 154
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSA----RQL 245
+ +S+L GY + ++ A+ ++M E + ++ ++ G S A Q+
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 246 FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQI 301
++ P+ V++ T++ G + G I A L + M NVV +N +I + + +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 302 DEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----AL 353
+ AV LF ++ K + V+++++IN G+ +A + + M K I AL
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 354 MSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
+ + G++ EA K+ ++ R DTI +N +I GFC R+DEA +F+ M K+
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 410 V----SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALK 461
+ ++NT+I+G+ + +++ +F+ M +R N V++ ++I GF Q A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
M D T+ + +Y+ KS ++F+ N +I
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
K G+V A +F ++ + PD VT+
Sbjct: 515 KAGKVGEAWDLFCSLS----------------------------------IKPDVVTYNT 540
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
M+S L + DLF+ M ED + P + Y+ L+
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLI 577
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 230/523 (43%), Gaps = 51/523 (9%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWN 227
+ DA +F M P +V +N +L+ + K L + E+M ++ +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
+ ++ F LS A + K+ P+ V+ ++L G+ +I++A L D M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLD 333
P + ++ +I + EAV L ++ + D V++ T++NG + G +D
Sbjct: 183 GYKP--DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMFNQLSTR----DTICWNSMI 385
A + N+M I A + + +I + V+ A +F ++ T+ + + +NS+I
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNI- 440
C GR +A L M +K N V++N +I + + G++ AE + + M +R+I
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 441 ---VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
+++N LI GF ++ +A + M + P+ T+ + G +L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYAL 553
+ + G + + +I + + G +SA+ VF + D+++++ L+ G
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G A FK + E+ + + M+ AG + DLF C +I+P
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF-C---SLSIKPDVV 536
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLLGA 653
Y+ ++ L L+EA ++ R M N+G + +L+ A
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 184/371 (49%), Gaps = 39/371 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K VE AV +F+ I N+VTYNS+I+ G+ SDA +L M +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ N+V++N +I + + EA KL + M +R D ++ L+I + +L++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A+++ + + K +N++I G+ K + D ++F M + L V+Y +++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 201 GYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP---- 252
G+ Q G A F++M +++++++++ G + G L +A +F+ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
N + TM+ G + GK+ EA LF S+ K +VV++N MI+ + EA LF K+
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 312 PHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMPCKDI---AAETALMSGLIQTGRV 363
+DG +++T+I +R + E+ +M A+ +L++ ++ GR+
Sbjct: 562 -KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRL 620
Query: 364 DEASKMFNQLS 374
D++ N LS
Sbjct: 621 DKS--FLNMLS 629
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 152/389 (39%), Gaps = 47/389 (12%)
Query: 331 KLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWN 382
K+D+A +++ M P I L+S + + + + + Q+ T D ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
I FC+ ++ AL + +M K GY E +IV+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKL----------GY-----------------EPDIVT 155
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
+SL+ G+ + DA+ + M G KPD TF L + ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAI 558
+ G DL ++ K G ++ A + +E +++ +N++I +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
A F +M ++ + P+ VT+ +++ + G + L M+E I P ++ L
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNAL 334
Query: 619 VDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLEIGE--FAAMRLSEL 673
+D + G+L EA + M + + + L+ +H L+ + F M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 674 EPHNASNYITLSNMHAEAGRWEE-VERLR 701
P N Y TL N + R E+ VE R
Sbjct: 395 LP-NIQTYNTLINGFCKCKRVEDGVELFR 422
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 228/442 (51%), Gaps = 44/442 (9%)
Query: 48 KLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-QRNLVSWN 102
+LGK +A ++ + +++TYN MIS + K G+I++A + D+MS ++V++N
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYN 208
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRKGKLEKARELLELVPDK 158
T++ + +++A ++ D M +RD + ++ ++I R + A +LL+ + D+
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 159 ---LESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLA 211
+ +N ++ G K+G+ +A K N MP +++++N +L G+ A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCG 263
M K +VV++N++++ G L A + EK+P PN++S+ +L G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG--- 316
F + K+ A + M + ++V++N M+ A +D ++++AV++ +L K
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 317 -VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFN 371
++++T+I+G + GK +A ++ ++M KD+ +T +L+ GL + G+VDEA K F+
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 372 QLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAG 423
+ + + +NS++ G C+S + D A+D M K N S+ +I G A G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 424 QMDSAENIFQAMEERNIVSWNS 445
A + + + ++ +S
Sbjct: 569 MAKEALELLNELCNKGLMKKSS 590
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 227/480 (47%), Gaps = 69/480 (14%)
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQ 244
V D++ +++ G+ + GK A E + A +V+++N+M+SG+ +G++++A
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 245 LFEKIP-NPNAVSWVTMLCGFARHGKITEARRLFDSM---PC-KNVVSWNAMIAAYAQDL 299
+ +++ +P+ V++ T+L GK+ +A + D M C +V+++ +I A +D
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 300 QIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMP---CK-DIAAET 351
+ A+KL ++ + D V+++ ++NG + G+LDEA + N MP C+ ++
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
++ + TGR +A K+ + + + +N +I C+ G + A+D+ +MP+
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 407 ---KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDA 459
NS+S+N ++ G+ + +MD A + M R +IV++N+++T ++ DA
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
++ L + +G P T+ N +I
Sbjct: 434 VEILNQLSSKGCSPVLITY-----------------------------------NTVIDG 458
Query: 520 YAKCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
AK G+ A ++ + DL I+++SL+ G + G EA K F + + P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VTF ++ + ++ +D M+ + +P Y+ L++ L G +EA ++
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 203/447 (45%), Gaps = 31/447 (6%)
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN--- 251
+ ++ +GY+ + G A ++V S N + V +G+L + E +
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGN 133
Query: 252 -PNAVSWVTMLCGFARHGKITEARRLFD----SMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
P+ + T++ GF R GK +A ++ + S +V+++N MI+ Y + +I+ A+
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 307 LFIKLP-HKDGVSWSTIINGYIRVGKLDEAREVYNQM---PC-KDIAAETALMSGLIQTG 361
+ ++ D V+++TI+ GKL +A EV ++M C D+ T L+ +
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWN 413
V A K+ +++ R D + +N ++ G C+ GR+DEA+ MP + N ++ N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 414 TMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
++ G+ AE + M + ++V++N LI + L A+ L M +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G +P+ ++ + E ++ G D+ N ++ K G+VE A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 530 EQVFTAIE---CVD-LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
++ + C LI++N++I G A G +A K +M ++++ PD +T+ ++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLA 612
S G ++ + F E I P A
Sbjct: 494 LSREGKVDEAIKFFH-EFERMGIRPNA 519
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKN----LVTYNSMISVFAKNGKISDARQLFD 91
+ N + L K GKVE+AV + + K L+TYN++I AK GK A +L D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 92 KMSQRNL----VSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCYTR 141
+M ++L +++++++ G V+EA K F + P F+ ++ C +R
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 142 KGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNS 197
+ ++A + L + + K + +I G A +G +A ++ N + K L+ +S
Sbjct: 534 --QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 228/440 (51%), Gaps = 57/440 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +ISDA L D+M + + +++ T+I G +LHN EA L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVAL 212
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLESA-------CWNSVIA 169
D M +R + ++ +++ ++G + A LL +K+E+A +N++I
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL----NKMEAAKIEADVVIFNTIID 268
Query: 170 GYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---- 221
K DA +F M K ++V+Y+S+++ G+ A M EK
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLF 277
N+V++N ++ FV G A +L++ + +P+ ++ +++ GF H ++ +A+++F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 278 DSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
+ M K +VV++N +I + + ++++ +LF ++ H+ D V+++T+I G
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 330 GKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICW 381
G D A++V+ QM DI + L+ GL G++++A ++F+ + D +
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+MI G C++G++D+ DLF + K N V++NTMISG + A + + M+E
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 438 ----RNIVSWNSLITGFLQN 453
N ++N+LI L++
Sbjct: 569 DGPLPNSGTYNTLIRAHLRD 588
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 210/445 (47%), Gaps = 67/445 (15%)
Query: 51 KVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV + + + NLVTY +++ K G A L +KM + ++V +N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPD 157
T+I V++A LF M + + +++ +I+C G+ A +LL +++
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 158 KLES--ACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
K+ +N++I + K+G+F +AEK+++ M + D+ +YNS++ G+ + ++ A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG 263
FE M K +VV++N ++ GF S + +LF ++ + + V++ T++ G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
G A+++F M V D +++S ++
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGV---------------------------PPDIMTYSILL 477
Query: 324 NGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR--- 376
+G GKL++A EV++ M DI T ++ G+ + G+VD+ +F LS +
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENI 431
+ + +N+MI+G C + EA L ++M P NS ++NT+I + + G ++ +
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 432 FQAMEERNIVSWNSLITGFLQNSLY 456
+ M V S I G + N L+
Sbjct: 598 IREMRSCRFVGDASTI-GLVANMLH 621
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 236/518 (45%), Gaps = 82/518 (15%)
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R L +V +N +++ AK +F S EK+ L V L +YN +
Sbjct: 74 GGMVKSRPLPSIVE-------FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---- 250
+ + + ++ LAL KM E ++V+ + +++G+ + +S A L +++
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM------P------------CK--------- 283
P+ +++ T++ G H K +EA L D M P CK
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 284 ------------NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYI 327
+VV +N +I + + +D+A+ LF ++ K + V++S++I+
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 328 RVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTI 379
G+ +A ++ + M K I AL+ ++ G+ EA K+++ + R D
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAM 435
+NS++ GFC R+D+A +F M K+ V++NT+I G+ ++ +++ +F+ M
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 436 EERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
R + V++ +LI G + +A K M +G PD T+
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSL 547
+ ++ +Y+ KS D+++ +I K G+V+ +F ++ +++++N++
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
ISG EA+ K+M + +P+ T+ ++ A
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 248/554 (44%), Gaps = 66/554 (11%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWN 227
+ DA +F M P+ +V +N +L+ + K + + EKM +V ++N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
++++ F +S A L K+ P+ V+ ++L G+ +I++A L D M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM--- 181
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQM 342
+++ ++ D ++++T+I+G K EA + ++M
Sbjct: 182 -------------------------VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 343 ---PCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM 394
C+ ++ +++GL + G D A + N++ D + +N++I C+ +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSL 446
D+AL+LF++M K N V+++++IS G+ A + M E+ N+V++N+L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
I F++ + +A K M + PD T+ Q+ E+++
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFK 562
D+ N LI + K RVE ++F + D +++ +LI G +G A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
FKQM+S+ V PD +T+ +L + G + L++F M + I+ Y+ +++ +
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGM 515
Query: 623 GRMGRLEEAFNVVRGMD---VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-HNA 678
+ G++++ +++ + VK N + +++ + L+ ++ E P N+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 679 SNYITLSNMHAEAG 692
Y TL H G
Sbjct: 576 GTYNTLIRAHLRDG 589
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 185/365 (50%), Gaps = 38/365 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K V++A+ +F + I N+VTY+S+IS G+ SDA QL M +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ NLV++N +I ++ EA KL+D M +R D F++ ++ + +L+K
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLA 200
A+++ E + K + +N++I G+ K + D ++F M V D V+Y +++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 201 GYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP---- 252
G +G A F++M +++++++++ G N+G L A ++F+ +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
+ + TM+ G + GK+ + LF S+ K NVV++N MI+ + EA L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 309 IKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTG 361
K+ P + +++T+I ++R G + E+ +M C+ + A+ L++ ++ G
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Query: 362 RVDEA 366
R+D++
Sbjct: 624 RLDKS 628
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 232/436 (53%), Gaps = 49/436 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + + +ISDA L D+M + + ++ T+I G +LHN EA L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK-ASEAVAL 210
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPDKLES--ACWNSVIAGYAK 173
D M +R D ++ ++ ++G ++ A LL ++ K+E+ +N++I G K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
DA +F M K D+ +Y+S+++ G+ A M E+ NVV+
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++ ++ FV G L A +L++++ +P+ ++ +++ GF H ++ EA+ +F+ M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLD 333
K NVV+++ +I + + +++E ++LF ++ + + V+++T+I+G+ + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A+ V+ QM +I L+ GL + G++ +A +F L D +N MI
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEE---- 437
G C++G++++ +LF + K N +++NTMISG+ + G + A+++ + M+E
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 438 RNIVSWNSLITGFLQN 453
N ++N+LI L++
Sbjct: 571 PNSGTYNTLIRARLRD 586
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/584 (22%), Positives = 264/584 (45%), Gaps = 134/584 (22%)
Query: 38 NKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM---- 93
NK + +I LG E ++ I +L TY+ I+ F + ++S A + KM
Sbjct: 97 NKFELVISLG------EQMQTLG--ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKAR 149
+ ++V+ ++++ GY H+ + +A L D M E D F++ +I KA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH---NKAS 205
Query: 150 ELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
E + LV ++ C DLV+Y +++ G + G +
Sbjct: 206 EAVALVDQMVQRGCQ-------------------------PDLVTYGTVVNGLCKRGDID 240
Query: 210 LALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML 261
LAL +KM E +VV +N ++ G + A LF ++ N P+ ++ +++
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST 321
+G+ ++A RL M + + + + V++S
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKI---------------------------NPNVVTFSA 333
Query: 322 IINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+I+ +++ GKL EA ++Y++M + DI ++L++G R+DEA MF + ++D
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 378 ----TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAE 429
+ ++++I GFC++ R++E ++LFR+M ++ N+V++ T+I G+ QA D+A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 430 NIFQAM----EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
+F+ M NI+++N L+ G +N K++V+
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNG---KLAKAMVVF------------------- 491
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDL 541
EY+ +S D++ N +I K G+VE ++F + ++
Sbjct: 492 -------------EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
I++N++ISG+ G EA K+M + +P+ T+ ++ A
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 258/554 (46%), Gaps = 86/554 (15%)
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R +V +N +++ AK +F S E++ L DL +Y+
Sbjct: 72 GDMVKSRPFPSIVE-------FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---- 250
+ + + ++ LAL KM E ++V+ + +++G+ +S +S A L +++
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM---PCK-NVVSWNAMIAAYAQDLQIDEAVK 306
P+ ++ T++ G H K +EA L D M C+ ++V++ ++ + ID A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 307 LFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLI 358
L K+ D V ++TII+G + +D+A ++ +M K D+ ++L+S L
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 359 QTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSV 410
GR +AS++ + + R + + ++++I F + G++ EA L+ +M K+ +
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLM 466
+++++I+G+ ++D A+++F+ M + N+V++++LI GF +
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK-------------- 410
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
K+ ++ G +L + + G + + LI + +
Sbjct: 411 ---AKRVEE------------------GMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 527 ESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
++A+ VF + V +++++N L+ G NG +A F+ + + PD T+ M
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ AG G +LF C + + P Y+ ++ R G EEA ++++ M
Sbjct: 510 IEGMCKAGKVEDGWELF-CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 643 ---NAGLWGSLLGA 653
N+G + +L+ A
Sbjct: 569 PLPNSGTYNTLIRA 582
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 185/365 (50%), Gaps = 38/365 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K +++A+ +F+ I ++ TY+S+IS G+ SDA +L M +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
R N+V+++ +I ++ + EA KL+D M +R D F+++ +I + +L++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A+ + EL+ K ++++I G+ K + + ++F M + L V+Y +++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 201 GYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----P 252
G+ Q A F++M N++++N+++ G +G L+ A +FE + P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
+ ++ M+ G + GK+ + LF ++ K NV+++N MI+ + + +EA L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 309 IKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQTG 361
K+ P + +++T+I +R G + + E+ +M A + + L++ ++ G
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Query: 362 RVDEA 366
R+D++
Sbjct: 622 RLDKS 626
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 154/294 (52%), Gaps = 31/294 (10%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFD 91
VF + I L G+ +A R+ S+ I + N+VT++++I F K GK+ +A +L+D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRKG 143
+M +R ++ +++++I G+ + ++EA +F++M +D F +++ +I + +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 144 KLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYN 196
++E+ EL + + + + ++I G+ + +A+ VF M ++++YN
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 197 SMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-- 250
+L G +NGK+ A+ FE + E ++ ++N+M+ G +G + +LF +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 251 --NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQD 298
+PN +++ TM+ GF R G EA L M P N ++N +I A +D
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 229/517 (44%), Gaps = 80/517 (15%)
Query: 269 KITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVKL-----FIKLPHKDGVSW 319
K+ +A LF M P ++V +N +++A A+ + + + L + + H D ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTY 121
Query: 320 STIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
S IN + R +L A V +M P DI ++L++G + R+ +A + +Q+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 374 S----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQM 425
DT + ++I G + EA+ L QM ++ V++ T+++G + G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 426 DSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
D A ++ + ME E ++V +N++I G + DAL M +G +PD T+
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT-----AI 536
++L +++ ++ +ALI + K G++ AE+++ +I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+ D+ +++SLI+G+ ++ EA F+ M+S++ P+ VT+ ++ A +G+
Sbjct: 360 D-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 597 DLFKCMVE----------------------------------DFAIEPLAEHYSCLVDLL 622
+LF+ M + + P Y+ L+D L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 623 GRMGRLEEA---FNVVRGMDVKANAGLWGSLL-GACRVHKNLEIG--EFAAMRLSELEPH 676
+ G+L +A F ++ ++ + + ++ G C+ K +E G F + L + P
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK-VEDGWELFCNLSLKGVSP- 536
Query: 677 NASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
N Y T+ + G EE + L L + K G LP
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSL--LKKMKEDGPLP 571
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 235/457 (51%), Gaps = 47/457 (10%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDV 123
V +N++++ ++S+A +L D+M + L++ NT++ G N V +A L D
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 124 MPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQ 176
M E + ++ ++ + G+ A ELL + + KL++ ++ +I G K G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 177 FSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNL 228
+A +FN M +K D+++YN+++ G+ G+ M ++ NVV++++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 229 MVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK- 283
++ FV G L A QL +++ PN +++ +++ GF + ++ EA ++ D M K
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 284 ---NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAR 336
+++++N +I Y + +ID+ ++LF ++ + + V+++T++ G+ + GKL+ A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 337 EVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGF 388
+++ +M + DI + L+ GL G +++A ++F ++ D + +I G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 389 CQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NI 440
C + ++D+A DLF +P K ++ ++N MIS + + A+ +F+ M E +
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
+++N LI L + A + + M G D ST
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 221/449 (49%), Gaps = 58/449 (12%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNS 112
R FS +NL +Y +S K DA LF M Q ++ +N + +
Sbjct: 44 RGFSTFSDRNL-SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK 102
Query: 113 MVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV------PDKLESA 162
E L M + ++ ++MI C+ R KL A + + PD +
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD---TV 159
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+N+++ G + + S+A ++ + M P L++ N+++ G NGK+ A+ +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPT--LITLNTLVNGLCLNGKVSDAVVLID 217
Query: 217 KMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN----AVSWVTMLCGFARHG 268
+M E N V++ +++ SG + A +L K+ N AV + ++ G + G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 269 KITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWS 320
+ A LF+ M K +++++N +I + + D+ KL + + + V++S
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR 376
+I+ +++ GKL EA ++ +M + IA T +L+ G + R++EA +M + + ++
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 377 ----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSA 428
D + +N +I G+C++ R+D+ L+LFR+M + N+V++NT++ G+ Q+G+++ A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 429 ENIFQAMEER----NIVSWNSLITGFLQN 453
+ +FQ M R +IVS+ L+ G N
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEAS 118
I N+VT++ +I F K GK+ +A QL +M QR N +++N++I G+ + +EEA
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 119 KLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGY 171
++ D+M + D ++ ++I Y + +++ EL + + + +N+++ G+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 172 AKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNV 223
+ G+ A+K+F M + D+VSY +L G NG++ AL F K+ E ++
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDS 279
+ +++ G N+ + A LF +P +A ++ M+ R +++A LF
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 280 MP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD---GVSWSTIINGYIRVGKL 332
M + +++N +I A+ D A +L ++ VS ++ + G+L
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
Query: 333 DEA 335
D++
Sbjct: 629 DKS 631
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 215/502 (42%), Gaps = 84/502 (16%)
Query: 215 FEKMAEKNVVSWNLMVSGFV-----NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK 269
F +++N+ + + SG V ++ DL R + + P P + + + A+ +
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGIKADDAVDL--FRDMIQSRPLPTVIDFNRLFSAIAKTKQ 103
Query: 270 ITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKL---FIKLPHK-DGVSWST 321
L M K + + + MI + + ++ A +KL ++ D V ++T
Sbjct: 104 YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNT 163
Query: 322 IINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQLST 375
++NG ++ EA E+ ++M P + L++GL G+V +A + +++
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKP--TLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 376 R----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDS 427
+ + + ++ C+SG+ A++L R+M ++N +V ++ +I G + G +D+
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 428 AENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
A N+F ME + +I+++N+LI GF + D K L M + P+ TF
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF----- 336
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CV 539
+ LI + K G++ A+Q+ +
Sbjct: 337 ------------------------------SVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 540 DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
+ I++NSLI G+ EA + M+S+ PD +TF +++ A + GL+LF
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 600 KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM-------DVKANAGLWGSLLG 652
+ M I Y+ LV + G+LE A + + M D+ + L L
Sbjct: 427 REMSLRGVIANTV-TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 653 ACRVHKNLEIGEFAAMRLSELE 674
+ K LEI F + S++E
Sbjct: 486 NGELEKALEI--FGKIEKSKME 505
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 236/462 (51%), Gaps = 47/462 (10%)
Query: 64 HKNLVTYNSMISVFAKNGKISDARQLFDK---MSQR-NLVSWNTMIAGYLHNSMVEEASK 119
+ +T++++++ F G++S+A L D+ M QR +LV+ +T+I G V EA
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 120 LFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYA 172
L D M E D ++ ++ + G A +L + + K ++ VI
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 173 KKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN----VV 224
K G F DA +FN M +K D+V+Y+S++ G +GK +M +N VV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++ ++ FV G L A++L+ ++ P+ +++ +++ GF + + EA ++FD M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 281 PCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKL 332
K ++V+++ +I +Y + ++D+ ++LF ++ K + ++++T++ G+ + GKL
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 333 DEAREVYNQMPCKDIAAETA----LMSGLIQTGRVDEASKMFNQL-STRDTI---CWNSM 384
+ A+E++ +M + + L+ GL G +++A ++F ++ +R T+ +N +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
I G C + ++D+A LF + K + V++N MI G + G + A+ +F+ M+E
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 441 V----SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++N LI L S +++ + M G D ST
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 262/552 (47%), Gaps = 92/552 (16%)
Query: 82 KISDARQLFDKMSQ-RNL---VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWA 133
K++DA LF+ M Q R L + +N + + + M E D ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 134 LMITCYTRKGKLEKARELLELV------PDKLESACWNSVIAGYAKKGQFSDA----EKV 183
+MI CY RK KL A +L PD + +++++ G+ +G+ S+A +++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT---FSTLVNGFCLEGRVSEAVALVDRM 166
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDL 239
+ DLV+ ++++ G G++ AL ++M E + V++ +++ SG+
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 240 SSARQLFEKIPNPN----AVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAM 291
+ A LF K+ N V + ++ + G +A LF+ M K +VV+++++
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 292 IAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
I D + D+ K+ ++ + D V++S +I+ +++ GKL EA+E+YN+M + I
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 348 AAET----ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALD 399
A +T +L+ G + + EA++MF+ + ++ D + ++ +I +C++ R+D+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 400 LFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFL 451
LFR++ K N++++NT++ G+ Q+G++++A+ +FQ M R ++V++ L+ G
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
N AL ++ E + KS +
Sbjct: 467 DNGELNKAL-----------------------------------EIFEKMQKSRMTLGIG 491
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQM 567
+ N +I +V+ A +F ++ D++++N +I G G EA F++M
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 568 LSEEVVPDQVTF 579
+ PD T+
Sbjct: 552 KEDGCTPDDFTY 563
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 221/507 (43%), Gaps = 79/507 (15%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWN 227
+ +DA +F M P+ + +N + + + + L L F + M E ++ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 228 LMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
+M++ + L A + + P+ +++ T++ GF G+++EA L D M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLD 333
P ++V+ + +I ++ EA+ L ++ D V++ ++N + G
Sbjct: 170 KQRP--DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 334 EAREVYNQMPCKDIAAETA----LMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A +++ +M ++I A ++ L + G D+A +FN++ + D + ++S+I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 386 AGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERNI- 440
G C G+ D+ + R+M +N V+++ +I + + G++ A+ ++ M R I
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 441 ---VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
+++NSLI GF + + +A + LM +G +PD T+ G +L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYAL 553
I G I + N L+ + + G++ +A+++F + ++++ L+ G
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 554 NGYAIEAFKAFKQM----------------------------------LSEE-VVPDQVT 578
NG +A + F++M LS++ V PD VT
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVED 605
+ M+ G ++ LF+ M ED
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 198/401 (49%), Gaps = 49/401 (12%)
Query: 50 GKVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSW 101
G+V EA+ R+ + VTY +++ K+G + A LF KM +RN+ V +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE---- 153
+ +I + ++A LF+ M + D +++ +I GK + ++L
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 154 --LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGK 207
++PD + ++++I + K+G+ +A++++N M + D ++YNS++ G+ +
Sbjct: 309 RNIIPDVVT---FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 208 MGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVT 259
+ A F+ M E ++V+++++++ + + + +LF +I + PN +++ T
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 260 MLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD 315
++ GF + GK+ A+ LF M + +VV++ ++ + ++++A+++F K+
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 316 ---GVS-WSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEAS 367
G+ ++ II+G K+D+A ++ + K D+ ++ GL + G + EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 368 KMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+F ++ T D +N +I + +++L +M
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 162/330 (49%), Gaps = 60/330 (18%)
Query: 43 IIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
I L K G ++A+ +F+ I ++VTY+S+I +GK D ++ +M RN+
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE----- 153
+ D +++ +I + ++GKL +A+EL
Sbjct: 312 IP---------------------------DVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 154 -LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKM 208
+ PD + +NS+I G+ K+ +A ++F+LM K D+V+Y+ ++ Y + ++
Sbjct: 345 GIAPDTIT---YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 209 GLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTM 260
+ F +++ K N +++N +V GF SG L++A++LF+++ + P+ V++ +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 261 LCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKLPHK-- 314
L G +G++ +A +F+ M + +N +I ++D+A LF L K
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 315 --DGVSWSTIINGYIRVGKLDEAREVYNQM 342
D V+++ +I G + G L EA ++ +M
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 225/517 (43%), Gaps = 80/517 (15%)
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
++ L+ N + +TQ + G +L + + E + + +G V+ ++ A LFE
Sbjct: 2 IQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI-KVNDAIDLFES 60
Query: 249 I----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQ 300
+ P P + + + AR + M + + MI Y + +
Sbjct: 61 MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 120
Query: 301 IDEAVKLFI---KLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAAE 350
+ A + KL ++ D +++ST++NG+ G++ EA + ++M P D+
Sbjct: 121 LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP--DLVTV 178
Query: 351 TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ L++GL GRV EA + +++ D + + ++ C+SG ALDLFR+M +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 407 KN----SVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFD 458
+N V ++ +I + G D A ++F ME + ++V+++SLI G + + D
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
K L M PD TF +ALI
Sbjct: 299 GAKMLREMIGRNIIPDVVTF-----------------------------------SALID 323
Query: 519 MYAKCGRVESAEQVF----TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
++ K G++ A++++ T D I++NSLI G+ EA + F M+S+ P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL---EEA 631
D VT+ ++++ A + G+ LF+ + + P Y+ LV + G+L +E
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 632 FNVVRGMDVKANAGLWGSLL-GAC---RVHKNLEIGE 664
F + V + +G LL G C ++K LEI E
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 226/440 (51%), Gaps = 57/440 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +ISDA L D+M + + +++ T+I G +LHN EA L
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVAL 137
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLESA-------CWNSVIA 169
D M +R + ++ +++ ++G ++ A LL +K+E+A +N++I
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL----NKMEAAKIEADVVIFNTIID 193
Query: 170 GYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---- 221
K DA +F M K ++V+Y+S+++ G+ A M EK
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLF 277
N+V++N ++ FV G A +L + + +P+ ++ +++ GF H ++ +A+++F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 278 DSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
+ M K+ ++N +I + + ++++ +LF ++ H+ D V+++T+I G
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 330 GKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICW 381
G D A++V+ QM DI + L+ GL G++++A ++F+ + D +
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+MI G C++G++D+ DLF + K N V++NTMISG + A + + M+E
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 438 RNIV----SWNSLITGFLQN 453
+ ++N+LI L++
Sbjct: 494 DGPLPDSGTYNTLIRAHLRD 513
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 208/445 (46%), Gaps = 67/445 (15%)
Query: 51 KVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV + + + NLVTY +++ K G I A L +KM + ++V +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPD 157
T+I V++A LF M + + +++ +I+C G+ A +LL +++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 158 KLES--ACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
K+ +N++I + K+G+F +AEK+ + M + D+ +YNS++ G+ + ++ A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 212 LHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCG 263
FE M K+ ++N ++ GF S + +LF ++ + + V++ T++ G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
G A+++F M V D +++S ++
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGV---------------------------PPDIMTYSILL 402
Query: 324 NGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR--- 376
+G GKL++A EV++ M DI T ++ G+ + G+VD+ +F LS +
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENI 431
+ + +N+MI+G C + EA L ++M P +S ++NT+I + + G ++ +
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 432 FQAMEERNIVSWNSLITGFLQNSLY 456
+ M V S I G + N L+
Sbjct: 523 IREMRSCRFVGDASTI-GLVANMLH 546
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 184/365 (50%), Gaps = 38/365 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K V++A+ +F + I N+VTY+S+IS G+ SDA QL M +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ NLV++N +I ++ EA KL D M +R D F++ +I + +L+K
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLA 200
A+++ E + K + +N++I G+ K + D ++F M V D V+Y +++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 201 GYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP---- 252
G +G A F++M +++++++++ G N+G L A ++F+ +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
+ + TM+ G + GK+ + LF S+ K NVV++N MI+ + EA L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 309 IKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTG 361
K+ P D +++T+I ++R G + E+ +M C+ + A+ L++ ++ G
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Query: 362 RVDEA 366
R+D++
Sbjct: 549 RLDKS 553
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 226/497 (45%), Gaps = 75/497 (15%)
Query: 164 WNSVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+N +++ AK +F S EK+ L +L +YN ++ + + ++ LAL KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 220 ----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
E ++V+ + +++G+ + +S A L +++ P+ +++ T++ G H K +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 272 EARRLFDSM------P------------CK---------------------NVVSWNAMI 292
EA L D M P CK +VV +N +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 293 AAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ + +D+A+ LF ++ K + V++S++I+ G+ +A ++ + M K I
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 349 AE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDL 400
AL+ ++ G+ EA K+ + + R D +NS+I GFC R+D+A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 401 FRQMPKKNSV----SWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQ 452
F M K+ ++NT+I G+ ++ +++ +F+ M R + V++ +LI G
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
+ +A K M +G PD T+ + ++ +Y+ KS D+++
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 513 SNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQML 568
+I K G+V+ +F ++ +++++N++ISG EA+ K+M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 569 SEEVVPDQVTFIGMLSA 585
+ +PD T+ ++ A
Sbjct: 493 EDGPLPDSGTYNTLIRA 509
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/538 (21%), Positives = 242/538 (44%), Gaps = 62/538 (11%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSAR 243
P+ + +N +L+ + K L + EKM N+ ++N++++ F +S A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 244 QLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
L K+ P+ V+ ++L G+ +I++A L D M
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM------------------- 106
Query: 300 QIDEAVKLFIKLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQM---PCK-DIAAETALM 354
+++ ++ D ++++T+I+G K EA + ++M C+ ++ ++
Sbjct: 107 ---------VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 355 SGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK--- 407
+GL + G +D A + N++ D + +N++I C+ +D+AL+LF++M K
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 408 -NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKS 462
N V+++++IS G+ A + M E+ N+V++N+LI F++ + +A K
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
M + PD T+ Q+ E+++ DL N LI + K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 523 CGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
RVE ++F + D +++ +LI G +G A K FKQM+S+ V PD +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+ +L + G + L++F M + I+ Y+ +++ + + G++++ +++ +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 639 D---VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-HNASNYITLSNMHAEAG 692
VK N + +++ + L+ ++ E P ++ Y TL H G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/582 (22%), Positives = 276/582 (47%), Gaps = 109/582 (18%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K+++AV +F + +++ ++ ++S AK K L ++M +NL
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNL-------- 110
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLES--AC 163
G HN +++++++I C+ R+ +L A +L +++ E
Sbjct: 111 GIPHN-----------------HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+S++ GY + S+A + + M V + V++N+++ G + K A+ ++M
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 220 EK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKIT 271
K ++V++ ++V+G GD A L K+ P + + T++ G ++ +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTII 323
+A LF M K NVV+++++I+ + +A +L + + D ++S +I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 324 NGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKMFNQLSTR--- 376
+ +++ GKL EA ++Y++M + I ++L++G R+DEA +MF + ++
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
D + +N++I GFC+ R++E +++FR+M ++ N+V++N +I G QAG D A+ I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 432 FQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ M NI+++N+L+ G +N K++V+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNG---KLEKAMVVF--------------------- 489
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLIS 543
EY+ +S ++ N +I K G+VE +F + D+++
Sbjct: 490 -----------EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+N++ISG+ G EA FK+M + +P+ + ++ A
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 222/447 (49%), Gaps = 72/447 (16%)
Query: 51 KVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWN 102
++ EAV ++F N VT+N++I + K S+A L D+M Q +LV++
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA 162
++ G + A L + M +GKLE P L
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKM----------------EQGKLE---------PGVL--- 257
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+N++I G K DA +F M K ++V+Y+S+++ G+ A M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 219 AEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKI 270
E+ +V +++ ++ FV G L A +L++++ +P+ V++ +++ GF H ++
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTI 322
EA+++F+ M K +VV++N +I + + +++E +++F ++ + + V+++ +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 323 INGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQL---ST 375
I G + G D A+E++ +M +I L+ GL + G++++A +F L
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 376 RDTI-CWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAEN 430
TI +N MI G C++G++++ DLF + K + V++NTMISG+ + G + A+
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 431 IFQAMEERNIVS----WNSLITGFLQN 453
+F+ M+E + +N+LI L++
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRD 584
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 227/502 (45%), Gaps = 41/502 (8%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAV 305
P P+ + + +L A+ K L + M N +++ +I + + Q+ A+
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 306 KLF---IKLPHKDG-VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGL 357
+ +KL ++ V+ S+++NGY ++ EA + +QM T L+ GL
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 358 IQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNS 409
+ EA + +++ + D + + ++ G C+ G D A +L +M +
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVL 465
+ +NT+I G + MD A N+F+ ME + N+V+++SLI+ + DA + L
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M PD TF +L++ ++K + ++LI + R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 526 VESAEQVF---TAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
++ A+Q+F + C D++++N+LI G+ E + F++M +V + VT+
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGM 638
++ AG + ++FK MV D + P Y+ L+D L + G+LE+A F ++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 639 DVKANAGLWGSLL-GACRVHKNLEIG--EFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
++ + ++ G C+ K +E G F + L ++P + Y T+ + G E
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGK-VEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKE 553
Query: 696 EVERLRVLMRDKRAGKLP--GC 715
E + L M++ G LP GC
Sbjct: 554 EADALFKEMKED--GTLPNSGC 573
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 183/366 (50%), Gaps = 40/366 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K +++A+ +F + I N+VTY+S+IS G+ SDA +L M +
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
R ++ +++ +I ++ + EA KL+D M +R +++ +I + +L++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A+++ E + K + +N++I G+ K + + +VF M + L V+YN ++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 201 GYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----P 252
G Q G +A F++M N++++N ++ G +G L A +FE + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
++ M+ G + GK+ + LF ++ K +VV++N MI+ + + +EA LF
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 309 IKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQT 360
++ +DG ++T+I +R G + + E+ +M A + + L++ ++
Sbjct: 560 KEM-KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Query: 361 GRVDEA 366
GR+D++
Sbjct: 619 GRLDKS 624
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/610 (22%), Positives = 277/610 (45%), Gaps = 84/610 (13%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNTMI 105
G V E V S+ I+ Y+ I V +K G + A+ LFD M L+ ++ ++I
Sbjct: 333 GLVHEMV---SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 106 AGYLHNSMVEEASKLFDVMPERD----NFSWALMITCYTRKGKLEKARELLELVPDKLES 161
GY V + +L M +R+ +++ ++ G L+ A +V + + S
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIAS 446
Query: 162 AC------WNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLA 211
C + ++I + + +F DA +V M D+ YNS++ G ++ +M A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 212 LHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG 263
F +M E N ++ +SG++ + + +SA + +++ PN V ++
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTII 323
+ + GK+ EA + SM +D+ + D +++ ++
Sbjct: 567 YCKKGKVIEACSAYRSM--------------------VDQGI-------LGDAKTYTVLM 599
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLS----T 375
NG + K+D+A E++ +M K IA + L++G + G + +AS +F+++ T
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
+ I +N ++ GFC+SG +++A +L +M K N+V++ T+I GY ++G + A +
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYF-DALKSLVLMGREGK------KPDQSTFXXXXXX 484
F M+ + +V + + T + D +++ + G K P +
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 485 XXXXXXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL-- 541
+V N+L + + G ND+ N +I K G +E+A+++F ++ +L
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 542 --ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
I++ SL++GY G E F F + ++ + PD + + +++A G+ + L L
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 600 KCMVEDFAIE 609
M A++
Sbjct: 899 DQMFAKNAVD 908
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 231/508 (45%), Gaps = 80/508 (15%)
Query: 54 EAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMI 105
+A+RV I ++ YNS+I +K ++ +AR +M + N ++ I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITC----YTRKGKLEKARELLELVPDKL-- 159
+GY+ S A K M E ++ T Y +KGK+ +A + D+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 160 -ESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHF 214
++ + ++ G K + DAE++F M K D+ SY ++ G+++ G M A
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 215 FEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR 266
F++M E+ NV+ +N+++ GF SG++ A++L +++ +PNAV++ T++ G+ +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 267 HGKITEARRLFDSMPCKNVVS----WNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST- 321
G + EA RLFD M K +V + ++ + ++ A+ +F +K G + ST
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--GTNKKGCASSTA 767
Query: 322 ----IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+IN + GK + EV N+ LM G F++ +
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNR-----------LMDG------------SFDRFGKPN 804
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQ 433
+ +N MI C+ G ++ A +LF QM N +++ ++++GY + G+ +F
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 434 ----AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR--------EGKKPDQSTFXXX 481
A E + + ++ +I FL+ + K+LVL+ + +G K ST
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGM---TTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYIND 509
+V ++ E +++ YI D
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 146/729 (20%), Positives = 308/729 (42%), Gaps = 115/729 (15%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY- 108
G +EEAV VFS+++ LV ++S + L D L+ WN + +
Sbjct: 165 GYIEEAVFVFSSSMGLELVP------------RLSRCKVLLDA-----LLRWNRLDLFWD 207
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVI 168
++ MVE + +FDV ++ ++I + R G ++ +++L + +A N
Sbjct: 208 VYKGMVER-NVVFDVK------TYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG 260
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV---- 224
A K+ L+P+K +Y+ ++ G + ++ A +M V
Sbjct: 261 ALKLKESMICKG-----LVPLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++L++ G + + +A+ L ++ N + +C ++ G + +A+ LFD M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 281 PCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV----SWSTIINGYIRVGKL 332
++ ++ ++I Y ++ + + +L +++ ++ V ++ T++ G G L
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 333 DEAREVYNQM---PCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSM 384
D A + +M C+ ++ T L+ +Q R +A ++ ++ + D C+NS+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE--- 437
I G ++ RMDEA +M K N+ ++ ISGY +A + SA+ + M E
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 438 ---------------------------RNIV---------SWNSLITGFLQNSLYFDALK 461
R++V ++ L+ G +N DA +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
M +G PD ++ Q + + + +++ G ++ + N L+ +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 522 KCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
+ G +E A+++ + L +++ ++I GY +G EAF+ F +M + +VPD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV-R 636
+ ++ C + + +F + A ++ L++ + + G+ E V+ R
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASS--TAPFNALINWVFKFGKTELKTEVLNR 791
Query: 637 GMD------VKANAGLWGSLLGACRVHKNLEIGE--FAAMRLSELEPHNASNYITLSNMH 688
MD K N + ++ NLE + F M+ + L P Y +L N +
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP-TVITYTSLLNGY 850
Query: 689 AEAGRWEEV 697
+ GR E+
Sbjct: 851 DKMGRRAEM 859
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/577 (20%), Positives = 265/577 (45%), Gaps = 98/577 (16%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
TY +++ +G + A + +M + N+V + T+I +L NS +A ++ M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 125 PER----DNFSWALMITCYTRKGKLEKARE-LLELVPDKLE--SACWNSVIAGYAKKGQF 177
E+ D F + +I ++ ++++AR L+E+V + L+ + + + I+GY + +F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 178 SDAEKVFN------LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWN 227
+ A+K ++P K L + ++ Y + GK+ A + M ++ ++ ++
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCT--GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMP-- 281
++++G + + A ++F ++ P+ S+ ++ GF++ G + +A +FD M
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 282 --CKNVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTIINGYIRVGKLDEA 335
NV+ +N ++ + + +I++A +L +K H + V++ TII+GY + G L EA
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 336 REVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMF---NQLSTRDTICWNSMIAGF 388
++++M K + + T L+ G + V+ A +F + T +N++I
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 389 CQSGR-----------MDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+ G+ MD + D F K N V++N MI + G +++A+ +F M+
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRF---GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 438 RN----IVSWNSLITGFLQ---NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
N ++++ SL+ G+ + + F + G E PD +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE---PDHIMYS----------- 879
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALI---AMYAKCGRVESAEQVFTAIECVDLISWNSL 547
++ + ++ + + AL+ M+AK + + + + + +L
Sbjct: 880 ----------VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK--------LSISTCRAL 921
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+SG+A G A K + M+ + +PD T I +++
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 222/420 (52%), Gaps = 53/420 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +ISDA L D+M + + +++ T+I G +LHN EA L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVAL 212
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLESA-------CWNSVIA 169
D M +R + ++ +++ ++G ++ A LL +K+E+A +++VI
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL----NKMEAAKIEANVVIYSTVID 268
Query: 170 GYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---- 221
K DA +F M K ++++Y+S+++ + A M E+
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLF 277
NVV++N ++ FV G L A +L++++ +P+ ++ +++ GF H ++ EA+ +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 278 DSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
+ M K NVV++N +I + + +IDE V+LF ++ + + V+++T+I+G+ +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 330 GKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLS---TRDTI-CW 381
D A+ V+ QM +I L+ GL + G++++A +F L TI +
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
N MI G C++G++++ DLF + K + + +NTMISG+ + G + A+ +F+ M E
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/575 (22%), Positives = 271/575 (47%), Gaps = 109/575 (18%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K+++A+ +F + ++ +N ++S AK K L +KM QR +S N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNL--- 120
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLESA--C 163
+++ ++I C+ R+ ++ A LL +++ E +
Sbjct: 121 -----------------------YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+S++ GY + SDA + + M D +++ +++ G + K A+ ++M
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 220 EK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
++ N+V++ ++V+G GD+ A L K+ N V + T++ ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTII 323
+A LF M K NV++++++I+ + +A +L + + + V+++ +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 324 NGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD-- 377
+ +++ GKL EA ++Y++M + DI ++L++G R+DEA MF + ++D
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 378 --TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
+ +N++I GFC++ R+DE ++LFR+M ++ N+V++ T+I G+ QA D+A+ +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 432 FQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ M NI+++N+L+ G +N K++V+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNG---KLEKAMVVF--------------------- 493
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLIS 543
EY+ +S ++ N +I K G+VE +F ++ D+I
Sbjct: 494 -----------EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+N++ISG+ G EA F++M + +PD T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 235/503 (46%), Gaps = 47/503 (9%)
Query: 143 GKLEKARELLELVPDKLESACWNSVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R L P E +N +++ AK +F S EK+ L +L +YN +
Sbjct: 74 GGMVKSRPL----PSIFE---FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
+ + + ++ LAL KM E ++V+ + +++G+ + +S A Q+ E
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM---PCK-NVVSWNAMIAAYAQDLQIDEAVK 306
P+ +++ T++ G H K +EA L D M C+ N+V++ ++ + ID A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 307 LFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLI 358
L K+ + V +ST+I+ + D+A ++ +M K ++ ++L+S L
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 359 QTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSV 410
R +AS++ + + R + + +N++I F + G++ EA L+ +M K+ +
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLM 466
+++++I+G+ ++D A+++F+ M + N+V++N+LI GF + + ++ M
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
+ G + T+ + + ++ G ++ N L+ K G++
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 527 ESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
E A VF ++ + ++N +I G G + + F + + V PD + + M
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 583 LSACSHAGLANQGLDLFKCMVED 605
+S GL + LF+ M ED
Sbjct: 547 ISGFCRKGLKEEADALFRKMRED 569
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 217/485 (44%), Gaps = 80/485 (16%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAV 305
P P+ + +L A+ K L + M N+ ++N +I + + QI A+
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 306 KLF---IKLPHKDG-VSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMS 355
L +KL ++ V+ S+++NGY ++ +A + +QM P D T L+
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP--DTITFTTLIH 198
Query: 356 GLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KK 407
GL + EA + +++ R + + + ++ G C+ G +D A +L +M +
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSL 463
N V ++T+I + D A N+F ME + N+++++SLI+ + DA + L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M P+ TF NALI + K
Sbjct: 319 SDMIERKINPNVVTF-----------------------------------NALIDAFVKE 343
Query: 524 GRVESAEQVFT-----AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
G++ AE+++ +I+ D+ +++SLI+G+ ++ EA F+ M+S++ P+ VT
Sbjct: 344 GKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+ +++ A ++G++LF+ M + + Y+ L+ + + A V + M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQM 461
Query: 639 ---DVKANAGLWGSLL-GAC---RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEA 691
V N + +LL G C ++ K + + E+ ++ S++EP + I + M +A
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY--LQRSKMEPTIYTYNIMIEGM-CKA 518
Query: 692 GRWEE 696
G+ E+
Sbjct: 519 GKVED 523
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 219/430 (50%), Gaps = 44/430 (10%)
Query: 52 VEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
+EE + +F I ++V ++ ++S AK+ LF M +L S+N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 104 MIAGYLHNS----MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD-- 157
+I S + K+ E D + + +I + + ++ A +L+ + +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 158 -KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLAL 212
+ + +N++I G K G +DA ++F+ M D V+YNS++AG +G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 213 HFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
M + NV+++ ++ FV G S A +L+E++ +P+ ++ +++ G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 265 ARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DG 316
HG++ EA+++ D M K +VV++N +I + + ++DE KLF ++ + D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 317 VSWSTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLST 375
++++TII GY + G+ D A+E++++M + +I + L+ GL RV++A +F +
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 376 R----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDS 427
D +N +I G C+ G +++A DLFR + K + VS+ TMISG+ + Q D
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 428 AENIFQAMEE 437
++ +++ M+E
Sbjct: 470 SDLLYRKMQE 479
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 156/298 (52%), Gaps = 29/298 (9%)
Query: 48 KLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLV 99
K+G V +AV +F + + + VTYNS+++ +G+ SDA +L M R N++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV 155
++ +I ++ EA KL++ M R D F++ +I G++++A+++L+L+
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 156 PDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKM 208
K + +N++I G+ K + + K+F M V D ++YN+++ GY Q G+
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 209 GLALHFFEKM-AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCG 263
A F +M + N+ ++++++ G + + A LFE + + ++ ++ G
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV 317
+ G + +A LF S+ CK +VVS+ MI+ + + Q D++ L+ K+ +DG+
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM-QEDGL 482
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 182/404 (45%), Gaps = 29/404 (7%)
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
W S +S +L LF K+ P P+ V + +L A+ LF M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 282 C----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLD 333
++ S+N +I + + A+ + K+ D V+ S++ING+ + ++
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 334 EAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
+A ++ ++M D+ ++ G + G V++A ++F+++ D + +NS++
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER--- 438
AG C SGR +A L R M + N +++ +I + + G+ A +++ M R
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 439 -NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
++ ++NSLI G + +A + L LM +G PD T+ G +L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGY 556
+ + G + D N +I Y + GR ++A+++F+ ++ ++ +++ L+ G +N
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWR 396
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+A F+ M E+ D T+ ++ G DLF+
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 182/428 (42%), Gaps = 66/428 (15%)
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMP 343
W + + ++E + LF K+ P V +S +++ + D +++ M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 344 C----KDIAAETALMSGLIQTGR----VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
D+ + +++ L + R + KM D + +S+I GFCQ R+
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 396 EALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLI 447
+A+DL +M + + V +NT+I G + G ++ A +F ME + V++NSL+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
G + + DA + + M P+ TF
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITF----------------------------- 247
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAI--ECVD--LISWNSLISGYALNGYAIEAFKA 563
A+I ++ K G+ A +++ + CVD + ++NSLI+G ++G EA +
Sbjct: 248 ------TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
M+++ +PD VT+ +++ + ++G LF+ M + + Y+ ++
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYF 360
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLL-GAC---RVHKNLEIGEFAAMRLSELEPHNAS 679
+ GR + A + MD + N + LL G C RV K L + F M+ SE+E +
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVL--FENMQKSEIELDITT 418
Query: 680 NYITLSNM 687
I + M
Sbjct: 419 YNIVIHGM 426
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 224/435 (51%), Gaps = 47/435 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
++VT NS+++ F +IS+A L D+M Q + V++ T++ G ++ EA L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 122 DVMP----ERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLES--ACWNSVIAGYAKK 174
+ M + D ++ +I ++G+ + A LL ++ K+E+ +++VI K
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 175 GQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW 226
DA +F M K D+ +Y+S+++ G+ A M E+ NVV++
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 227 NLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N ++ F G L A +LF+++ +PN V++ +++ GF H ++ EA+++F M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDE 334
K +VV++N +I + + ++ + ++LF + + + V+++T+I+G+ + D
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 335 AREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIA 386
A+ V+ QM +I L+ GL + G++++A +F L D +N M
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 387 GFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV- 441
G C++G++++ DLF + K + +++NTMISG+ + G + A +F M+E +
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 442 ---SWNSLITGFLQN 453
++N+LI L++
Sbjct: 554 DSGTYNTLIRAHLRD 568
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 147/631 (23%), Positives = 274/631 (43%), Gaps = 103/631 (16%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
++HL K++EAV +F + ++V ++ ++S AK K +KM
Sbjct: 41 LLHL----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME---- 92
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
I G HN +++ +MI C R+ +L A +L
Sbjct: 93 ------ILGVSHNL-----------------YTYNIMINCLCRRSQLSFALAILG----- 124
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
K+ L +V+ NS+L G+ ++ A+ ++M
Sbjct: 125 -----------------------KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 219 AE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKI 270
E + V++ +V G S A L E++ P+ V++ ++ G + G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 271 TEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTI 322
A L + M +VV ++ +I + + +D+A+ LF ++ +K D ++S++
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTR-- 376
I+ G+ +A + + M + I + LI + G++ EA K+F+++ R
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAEN 430
+ + +NS+I GFC R+DEA +F M K+ V++NT+I+G+ +A ++
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 431 IFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
+F+ M R N V++ +LI GF Q S +A M +G P+ T+
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLI 542
+ + EY+ KS D++ N + K G+VE +F ++ D+I
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++N++ISG+ G EA+ F +M + +PD T+ ++ A G +L K M
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 603 VE-DFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
FA + A Y + D+L GRL++ F
Sbjct: 582 RSCRFAGD--ASTYGLVTDMLHD-GRLDKGF 609
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 179/362 (49%), Gaps = 59/362 (16%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSN----TIHKNLVTYNSMISVFAKNGKISDARQLFD 91
VF + I L G+ +A R+ S+ I+ N+VT+NS+I FAK GK+ +A +LFD
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK 147
+M QR N+V++N++I G+ + ++EA ++F +M +D
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------------------- 375
Query: 148 ARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYT 203
+PD + +N++I G+ K + D ++F M V + V+Y +++ G+
Sbjct: 376 ------CLPDVVT---YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 204 QNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAV 255
Q A F++M N++++N ++ G +G L A +FE + P+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
++ M G + GK+ + LF S+ K +V+++N MI+ + + +EA LFIK+
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 312 ----PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQTGRVD 364
P D +++T+I ++R G + E+ +M A + + L++ ++ GR+D
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLD 606
Query: 365 EA 366
+
Sbjct: 607 KG 608
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 217/467 (46%), Gaps = 43/467 (9%)
Query: 267 HGKITEARRLFDSM----PCKNVVSWNAMIAAYAQ----DLQIDEAVKLFIKLPHKDGVS 318
H K+ EA LF M P ++V ++ +++A A+ DL I K+ I + +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 319 WSTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQ 372
++ +IN R +L A + +M P I +L++G R+ EA + +Q
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGP--SIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 373 LS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQ 424
+ DT+ + +++ G Q + EA+ L +M K V++ +I+G + G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 425 MDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXX 480
D A N+ ME E ++V ++++I + DAL M +G +PD T+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI--EC 538
++L +L+ ++ N+LI +AK G++ AE++F +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 539 VD--LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+D ++++NSLI+G+ ++ EA + F M+S++ +PD VT+ +++ A G+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLL-G 652
+LF+ M + Y+ L+ + + A V + M V N + +LL G
Sbjct: 401 ELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 653 AC---RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
C ++ K + + E+ ++ S++EP + Y +S +AG+ E+
Sbjct: 460 LCKNGKLEKAMVVFEY--LQKSKMEP-DIYTYNIMSEGMCKAGKVED 503
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 216/439 (49%), Gaps = 68/439 (15%)
Query: 54 EAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMI 105
EAV +F + L +T+N++I+ G++ +A L +KM + L V++ T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWN 165
G + A L M E + PD + ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEET-------------------------HIKPDVV---IYS 300
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
++I K G SDA+ +F+ M K ++ +YN M+ G+ G+ A M E+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 222 ----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEA 273
+V+++N ++S V G L A +L +++ + P+ V++ +M+ GF +H + +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
+ +FD M +VV++N +I Y + ++DE ++L ++ + + +++T+I+G+ V
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 330 GKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFN--QLST--RDTICW 381
L+ A++++ +M C D L+ G + +++EA ++F Q+S DT+ +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME- 436
N +I G C+ ++DEA DLF +P + + ++N MISG+ + A +F M+
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 437 ---ERNIVSWNSLITGFLQ 452
E + ++N+LI G L+
Sbjct: 601 NGHEPDNSTYNTLIRGCLK 619
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 203/397 (51%), Gaps = 54/397 (13%)
Query: 48 KLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLV 99
K+G + A+ + S I ++V Y+++I K+G SDA+ LF +M ++ N+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE-- 153
++N MI G+ +A +L M ER D ++ +I+ ++GKL +A +L +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 154 ----LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
+ PD + +NS+I G+ K +F DA+ +F+LM D+V++N+++ Y + ++
Sbjct: 393 LHRCIFPD---TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 210 LALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML 261
+ +++ + N ++N ++ GF +L++A+ LF+++ + P+ ++ +L
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 262 CGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLP----H 313
GF + K+ EA LF+ + + V++N +I + ++DEA LF LP
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 314 KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE------TALMSGLIQTGRVDEAS 367
D +++ +I+G+ + +A ++++M KD E L+ G ++ G +D++
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 368 KMFNQLSTRD------TICWNSMIAGFCQSGRMDEAL 398
++ +++ + TI M+A GR+D++
Sbjct: 628 ELISEMRSNGFSGDAFTI---KMVADLITDGRLDKSF 661
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 137/606 (22%), Positives = 247/606 (40%), Gaps = 121/606 (19%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
N+ ++N +I F K+S + F K++ Q ++V++NT++ G + EA LF
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAE 181
M E G+ + D
Sbjct: 200 GYMVE------------------------------------------TGFLEAVALFDQM 217
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSG 237
L PV ++++N+++ G G++ A KM K +VV++ +V+G G
Sbjct: 218 VEIGLTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 238 DLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWN 289
D SA L K+ P+ V + ++ + G ++A+ LF M K NV ++N
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 290 AMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
MI +G+ G+ +A+ + M ++I
Sbjct: 336 CMI-------------------------------DGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 350 ET----ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLF 401
+ AL+S ++ G++ EA K+ +++ R DT+ +NSMI GFC+ R D+A +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 402 RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYF 457
M + V++NT+I Y +A ++D + + + R +V ++N+LI GF +
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
A M G PD T + +L E I S D N +I
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 518 AMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
K +V+ A +F ++ D+ ++N +ISG+ +A F +M
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVED------FAIEPLAEHYSCLVDLLGRMGR 627
PD T+ ++ C AG ++ ++L M + F I+ +A DL+ GR
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA-------DLITD-GR 656
Query: 628 LEEAFN 633
L+++F+
Sbjct: 657 LDKSFS 662
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 177/359 (49%), Gaps = 55/359 (15%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+VF N I G+ +A R+ + I + +++T+N++IS K GK+ +A +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
D+M R + V++N+MI G+ ++ ++A +FD+M D ++ +I Y R +++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG 206
+ +LL + +++G V + +YN+++ G+ +
Sbjct: 450 EGMQLLREI----------------SRRGL------------VANTTTYNTLIHGFCEVD 481
Query: 207 KMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWV 258
+ A F++M V ++ N+++ GF + L A +LFE I + + V++
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 259 TMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-- 312
++ G + K+ EA LF S+P +V ++N MI+ + I +A LF K+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 313 --HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET---ALMSGLIQTGRVDEA 366
D +++T+I G ++ G++D++ E+ ++M + + +++ LI GR+D++
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKS 660
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 25/246 (10%)
Query: 394 MDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNS 445
+D+A+D F R P +V N +I + + + D A ++++ ME R NI S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI F +L + + + G +PD TF L Y++++G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
++ + + + ++ E T + +I++N+LI+G L G +EA
Sbjct: 207 FLEAVALFDQMV------------EIGLTPV----VITFNTLINGLCLEGRVLEAAALVN 250
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M+ + + D VT+ +++ G L+L M E+ I+P YS ++D L +
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCKD 309
Query: 626 GRLEEA 631
G +A
Sbjct: 310 GHHSDA 315
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 122/309 (39%), Gaps = 35/309 (11%)
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
+R Y + C + + ++ R D A ++ ++ R + +N +I FC
Sbjct: 100 SRPFYTAVDCNKV------IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153
Query: 391 SGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
++ +L F ++ K + V++NT++ G ++ A +F M E
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE--------- 204
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
TGFL+ FD + + G P TF L ++ G
Sbjct: 205 -TGFLEAVALFDQMVEI------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFK 562
D+ ++ K G +SA + + +E D++ ++++I +G+ +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F +ML + + P+ T+ M+ G + L + M+E I P ++ L+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISAS 376
Query: 623 GRMGRLEEA 631
+ G+L EA
Sbjct: 377 VKEGKLFEA 385
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 223/479 (46%), Gaps = 44/479 (9%)
Query: 206 GKMGLALHFFEKMAEKN----VVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSW 257
G++ AL F + E+ +VS N ++ G ++ + A +L + P PN V++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
T++ GF + G++ A LF M + + ++++ +I Y + + KLF + H
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 314 K----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDE 365
K D V +S+ I+ Y++ G L A VY +M C+ I+ T L+ GL Q GR+ E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 366 ASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMIS 417
A M+ Q+ R + ++S+I GFC+ G + L+ M K + V + ++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 418 GYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
G ++ G M A M + N+V +NSLI G+ + + + +ALK LMG G KP
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 474 DQSTFXXXXXXXXXX------XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
D +TF +G QL + + ++ D+ V N +I + KC R+E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 528 SAEQVF-TAIEC---VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
A + F IE D++++N++I GY EA + F+ + P+ VT ++
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ + +F M E + +P A Y CL+D + +E +F + M K
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/573 (24%), Positives = 258/573 (45%), Gaps = 101/573 (17%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
++E A R+ S + N+VT+ ++I+ F K G++ A LF M QR +L++++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA 162
T+I GY M+ KLF S AL KG KL+
Sbjct: 326 TLIDGYFKAGMLGMGHKLF---------SQAL------HKGV-------------KLDVV 357
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKM----GLALHF 214
++S I Y K G + A V+ M + ++V+Y ++ G Q+G++ G+
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
++ E ++V+++ ++ GF G+L S L+E + P+ V + ++ G ++ G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTI 322
A R M + NVV +N++I + + + DEA+K+F I D +++T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 323 I------NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQ 372
+ + + + K ++++ M I+A+ A+ + +I + R+++ASK FN
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
L G+M+ + V++NTMI GY ++D AE IF
Sbjct: 598 LI----------------EGKMEPDI-----------VTYNTMICGYCSLRRLDEAERIF 630
Query: 433 QAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
+ ++ N V+ LI +N+ A++ +M +G KP+ T+
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC---VDLISW 544
+ +L E + + G + + +I K GRV+ A +F AI+ D++++
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
LI GY G +EA ++ ML V PD +
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 140/590 (23%), Positives = 272/590 (46%), Gaps = 74/590 (12%)
Query: 115 EEASKLFDVMPERDNFSWA------LMITCYTRKGKLEKARELLEL------VPDKLESA 162
E AS +F + E + ++ L++ Y+R ++KA ++ L +P L
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS-- 171
Query: 163 CWNSVI-AGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
+N+V+ A K S AE VF M ++ +YN ++ G+ G + +AL F+K
Sbjct: 172 -YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 218 MAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGK 269
M K NVV++N ++ G+ + +L + PN +S+ ++ G R G+
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 270 ITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIK-LPH---KDGVSWST 321
+ E + M + + V++N +I Y ++ +A+ + + L H +++++
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 322 IINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLS--- 374
+I+ + G ++ A E +QM C + T L+ G Q G ++EA ++ +++
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 375 -TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAE 429
+ + +N++I G C +G+M++A+ + M +K + VS++T++SG+ ++ +D A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 430 NIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
+ + M E+ I ++++SLI GF + +A M R G PD+ T+
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF------------ 533
+ QLH +++ G + D+ + LI K R A+++
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 534 ----TAIE-C--VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
T IE C ++ S SLI G+ + G EA + F+ ML + PD + M+
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 587 SHAGLANQGLDLFKCMVED-FAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
AG + L+K MV+ F + + LV L + G++ E +V+
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVT--VIALVKALHKEGKVNELNSVI 698
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 230/503 (45%), Gaps = 107/503 (21%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEAS 118
+ N+ TYN +I F G I A LFDKM + N+V++NT+I GY +++
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 119 KLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGY 171
KL M E + S+ ++I R+G++++ +L + + L+ +N++I GY
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 172 AKKGQFSD-----------------------------------AEKVFNLMPVKDLV--- 193
K+G F A + + M V+ L
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 194 -SYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEK 248
+Y +++ G++Q G M A +M + +VV++N +++G +G + A + E
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 249 IP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQ 300
+ +P+ VS+ T+L GF R + EA R+ M K + ++++++I + + +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 301 IDEAVKLF-----IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAET 351
EA L+ + LP D +++ +IN Y G L++A +++N+M K D+ +
Sbjct: 501 TKEACDLYEEMLRVGLP-PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTRDTI------------CWN-------SMIAGFCQSG 392
L++GL + R EA ++ +L +++ C N S+I GFC G
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 393 RMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
M EA +F M KN ++N MI G+ +AG + A +++ M + +
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK----------S 669
Query: 449 GFLQNSLYFDALKSLVLMGREGK 471
GFL +++ AL + + +EGK
Sbjct: 670 GFLLHTVTVIAL--VKALHKEGK 690
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 49/274 (17%)
Query: 379 ICWNSMIAGFCQSGR-MDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQ 433
+ +N+++ +S R + A ++F++M + N ++N +I G+ AG +D A +F
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 434 AMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
ME + N+V++N+LI G+ + D K L M +G +P+
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN--------------- 274
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWN 545
L N +I + GR++ V T + +D +++N
Sbjct: 275 --------------------LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+LI GY G +A +ML + P +T+ ++ + AG N+ ++ M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RV 373
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ P Y+ LVD + G + EA+ V+R M+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 216/439 (49%), Gaps = 68/439 (15%)
Query: 54 EAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMI 105
EAV +F + L +T+N++I+ G++ +A L +KM + L V++ T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWN 165
G + A L M E + PD + ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEET-------------------------HIKPDVV---IYS 300
Query: 166 SVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
++I K G SDA+ +F+ M K ++ +YN M+ G+ G+ A M E+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 222 ----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEA 273
+V+++N ++S V G L A +L +++ + P+ V++ +M+ GF +H + +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
+ +FD M +VV++N +I Y + ++DE ++L ++ + + +++T+I+G+ V
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 330 GKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFN--QLST--RDTICW 381
L+ A++++ +M C D L+ G + +++EA ++F Q+S DT+ +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME- 436
N +I G C+ ++DEA DLF +P + + ++N MISG+ + A +F M+
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 437 ---ERNIVSWNSLITGFLQ 452
E + ++N+LI G L+
Sbjct: 601 NGHEPDNSTYNTLIRGCLK 619
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 193/370 (52%), Gaps = 45/370 (12%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----N 97
+ K+G + A+ + S I ++V Y+++I K+G SDA+ LF +M ++ N
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE 153
+ ++N MI G+ +A +L M ER D ++ +I+ ++GKL +A +L +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 154 ------LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
+ PD + +NS+I G+ K +F DA+ +F+LM D+V++N+++ Y + +
Sbjct: 391 EMLHRCIFPD---TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 208 MGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVT 259
+ + +++ + N ++N ++ GF +L++A+ LF+++ + P+ ++
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 260 MLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLP--- 312
+L GF + K+ EA LF+ + + V++N +I + ++DEA LF LP
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 313 -HKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE------TALMSGLIQTGRVDE 365
D +++ +I+G+ + +A ++++M KD E L+ G ++ G +D+
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 366 ASKMFNQLST 375
+ ++ +++ +
Sbjct: 626 SIELISEMRS 635
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 128/568 (22%), Positives = 230/568 (40%), Gaps = 107/568 (18%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEAS 118
I N+ ++N +I F K+S + F K++ Q ++V++NT++ G + EA
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
LF M E G+ +
Sbjct: 197 ALFGYMVE------------------------------------------TGFLEAVALF 214
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFV 234
D L PV ++++N+++ G G++ A KM K +VV++ +V+G
Sbjct: 215 DQMVEIGLTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 235 NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVV 286
GD SA L K+ P+ V + ++ + G ++A+ LF M K NV
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKD 346
++N MI +G+ G+ +A+ + M ++
Sbjct: 333 TYNCMI-------------------------------DGFCSFGRWSDAQRLLRDMIERE 361
Query: 347 IAAET----ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEAL 398
I + AL+S ++ G++ EA K+ +++ R DT+ +NSMI GFC+ R D+A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNS 454
+F M + V++NT+I Y +A ++D + + + R +V ++N+LI GF +
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
A M G PD T + +L E I S D N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 515 ALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+I K +V+ A +F ++ D+ ++N +ISG+ +A F +M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDL 598
PD T+ ++ C AG ++ ++L
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 164/332 (49%), Gaps = 52/332 (15%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+VF N I G+ +A R+ + I + +++T+N++IS K GK+ +A +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
D+M R + V++N+MI G+ ++ ++A +FD+M D ++ +I Y R +++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG 206
+ +LL + +++G V + +YN+++ G+ +
Sbjct: 450 EGMQLLREI----------------SRRGL------------VANTTTYNTLIHGFCEVD 481
Query: 207 KMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWV 258
+ A F++M V ++ N+++ GF + L A +LFE I + + V++
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 259 TMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP-- 312
++ G + K+ EA LF S+P +V ++N MI+ + I +A LF K+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 313 --HKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
D +++T+I G ++ G++D++ E+ ++M
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 30/278 (10%)
Query: 48 KLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
K GK+ EA ++ +H+ + VTYNSMI F K+ + DA+ +FD M+ ++V++NT
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE------ 153
+I Y V+E +L + R + ++ +I + L A++L +
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMG 209
+ PD + N ++ G+ + + +A ++F ++ + D V+YN ++ G + K+
Sbjct: 498 VCPDTITC---NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 210 LALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML 261
A F + E +V ++N+M+SGF +S A LF K+ + P+ ++ T++
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
G + G+I ++ L M N S +A A+++
Sbjct: 615 RGCLKAGEIDKSIELISEMR-SNGFSGDAFTIKMAEEI 651
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 25/246 (10%)
Query: 394 MDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNS 445
+D+A+D F R P +V N +I + + + D A ++++ ME R NI S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI F +L + + + G +PD TF L Y++++G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
++ + + + ++ E T + +I++N+LI+G L G +EA
Sbjct: 207 FLEAVALFDQMV------------EIGLTPV----VITFNTLINGLCLEGRVLEAAALVN 250
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M+ + + D VT+ +++ G L+L M E+ I+P YS ++D L +
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCKD 309
Query: 626 GRLEEA 631
G +A
Sbjct: 310 GHHSDA 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 122/309 (39%), Gaps = 35/309 (11%)
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
+R Y + C + + ++ R D A ++ ++ R + +N +I FC
Sbjct: 100 SRPFYTAVDCNKV------IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153
Query: 391 SGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
++ +L F ++ K + V++NT++ G ++ A +F M E
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE--------- 204
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
TGFL+ FD + + G P TF L ++ G
Sbjct: 205 -TGFLEAVALFDQMVEI------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFK 562
D+ ++ K G +SA + + +E D++ ++++I +G+ +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F +ML + + P+ T+ M+ G + L + M+E I P ++ L+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISAS 376
Query: 623 GRMGRLEEA 631
+ G+L EA
Sbjct: 377 VKEGKLFEA 385
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 221/457 (48%), Gaps = 69/457 (15%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEAS 118
I NL TY+ I+ F + ++S A + KM + ++V+ N+++ G+ H + + EA
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
L D M E + PD + + +++ G + + S
Sbjct: 166 ALVDQMVE-------------------------MGYQPD---TVTFTTLVHGLFQHNKAS 197
Query: 179 DAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMV 230
+A + M VK DLV+Y +++ G + G+ LAL+ KM E +VV +N ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV- 285
G + A LF K+ P+ ++ ++ +G+ ++A RL M KN+
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 286 ---VSWNAMIAAYAQDLQIDEAVKLF---IKLPH--KDGVSWSTIINGYIRVGKLDEARE 337
V +NA+I A+ ++ ++ EA KL+ +K H D V+++T+I G+ + +++E E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 338 VYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFC 389
V+ +M + + T L+ G Q D A +F Q+ + D + +N ++ G C
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 390 QSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEER----NIV 441
+G ++ AL +F M K++ V++ TMI +AG+++ ++F ++ + N+V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++ ++++GF + L +A V M +G P+ T+
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/548 (22%), Positives = 230/548 (41%), Gaps = 89/548 (16%)
Query: 161 SACWNSVIAGYAKKG-------------QFSDAEKVFNLM----PVKDLVSYNSMLAGYT 203
+ CW AG + + DA +F M P +V ++ +L+
Sbjct: 27 TLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIA 86
Query: 204 QNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAV 255
+ K L + E+M N+ ++++ ++ F LS A + K+ P+ V
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIV 146
Query: 256 SWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDEAV---- 305
+ ++L GF +I+EA L D M P + V++ ++ Q + EAV
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQP--DTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 306 KLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTG 361
++ +K D V++ +ING + G+ D A + N+M I A+ ++ GL +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWN 413
+D+A +FN++ T+ D +N +I+ C GR +A L M +KN V +N
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 414 TMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
+I + + G++ AE ++ M + ++V++N+LI GF + + ++ M +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
G VGN + L G+ NA +
Sbjct: 385 RG---------------------LVGNTVTYTTLIHGFFQARDCDNAQMVF--------- 414
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+Q+ + D++++N L+ G NG A F+ M ++ D VT+ M+ A
Sbjct: 415 -KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAG 645
AG G DLF C + ++P Y+ ++ R G EEA F ++ N+G
Sbjct: 474 AGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 646 LWGSLLGA 653
+ +L+ A
Sbjct: 533 TYNTLIRA 540
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 53/288 (18%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKN----LVTYNSMISVFAKNGKISDARQLFD 91
VF N I L G+ +A R+ S+ + KN LV +N++I F K GK+ +A +L+D
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 92 KMSQR-----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
+M + ++V++NT+I G+ VEE ++F M +R
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG------------------ 386
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGY 202
LV + + + ++I G+ + +A+ VF M D+++YN +L G
Sbjct: 387 -------LVGN---TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 203 TQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNA 254
NG + AL FE M ++ ++V++ M+ +G + LF + PN
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 255 VSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQD 298
V++ TM+ GF R G EA LF M P N ++N +I A +D
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 170/358 (47%), Gaps = 58/358 (16%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K +++A +F + I ++ TYN +IS G+ SDA +L M +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 96 RN----LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL 151
+N LV +N +I ++ + EA KL+D M + + C+
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH--------CF------------ 353
Query: 152 LELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
PD + +N++I G+ K + + +VF M + L V+Y +++ G+ Q
Sbjct: 354 ----PDVVA---YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 208 MGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA----VSWVT 259
A F++M +++++N+++ G N+G++ +A +FE + + V++ T
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 260 MLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKL---- 311
M+ + GK+ + LF S+ K NVV++ M++ + + +EA LF+++
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 312 PHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQTGRVDEA 366
P + +++T+I +R G + E+ +M A + + L++ ++ GR+D++
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKS 584
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/602 (21%), Positives = 270/602 (44%), Gaps = 61/602 (10%)
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARE- 150
++ N ++ +I YL M++++ ++F +M F+ ++ TC G + K+ E
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLY-GFNPSVY-TCNAILGSVVKSGED 214
Query: 151 ------LLELVPDKL--ESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSM 198
L E++ K+ + A +N +I +G F + + M +V+YN++
Sbjct: 215 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 199 LAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
L Y + G+ A+ + M K +V ++N+++ S ++ R + +++
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVK 306
+PN V++ T++ GF+ GK+ A +L + M N V++NA+I + + EA+K
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 307 LFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLI 358
+F + K VS+ +++G + + D AR Y +M C T ++ GL
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 359 QTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALD----LFRQMPKKNSV 410
+ G +DEA + N++S D + ++++I GFC+ GR A + ++R N +
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 411 SWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
++T+I + G + A I++AM R+ ++N L+T + +A + + M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
+G P+ +F + + + K G+ F +L+ K G +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 527 ESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
AE+ ++ VD + +N+L++ +G +A F +M+ ++PD T+ +
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 583 LSACSHAGLANQGLDLFKCMVEDFA-----IEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
+S GL +G + + A + P Y+C VD + + G+ +
Sbjct: 695 IS-----GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 638 MD 639
MD
Sbjct: 750 MD 751
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/632 (20%), Positives = 288/632 (45%), Gaps = 67/632 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
+VTYN+++ + K G+ A +L D M + ++ ++N +I ++ + + L
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGY 171
M +R + ++ +I ++ +GK+ A +LL L P+ + +N++I G+
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT---FNALIDGH 383
Query: 172 AKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKMAEKNV---- 223
+G F +A K+F +M K L VSY +L G +N + LA F+ +M V
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEAR----R 275
+++ M+ G +G L A L ++ +P+ V++ ++ GF + G+ A+ R
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTIINGYIRVGK 331
++ N + ++ +I + + EA++++ ++ +D +++ ++ + GK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 332 LDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLST----RDTICWNS 383
+ EA E M I T L++G +G +A +F++++ + S
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 384 MIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
++ G C+ G + EA + + ++V +NT+++ ++G + A ++F M +R+
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 440 IV----SWNSLITGFLQNSLYFDALKSLVLMGREGKK-----PDQSTFXXXXXXXXXXXX 490
I+ ++ SLI+G + A +L +E + P++ +
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIA----ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI----ECVDLISWNS 546
+ G E + G+ D+ +NA+I Y++ G++E + + +L ++N
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
L+ GY+ +F ++ ++ ++PD++T ++ + + GL + K +
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR- 858
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+E ++ L+ G + AF++V+ M
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/640 (19%), Positives = 279/640 (43%), Gaps = 85/640 (13%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVE 115
+R+ N + +TY MI KNG + +A L ++MS+ +
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI----------------- 474
Query: 116 EASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL------LELVPDKLESACWNSVIA 169
+ D +++ +I + + G+ + A+E+ + L P+ + ++++I
Sbjct: 475 ----------DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI---IYSTLIY 521
Query: 170 GYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----K 221
+ G +A +++ M + +D ++N ++ + GK+ A F M
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLF 277
N VS++ +++G+ NSG+ A +F+++ +P ++ ++L G + G + EA +
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 278 DSM----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
S+ + V +N ++ A + + +AV LF ++ + D +++++I+G R
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 330 GKL-------DEAREVYNQMPCKDIAAETALMSGLIQTGR----VDEASKMFNQLSTRDT 378
GK EA N +P K T + G+ + G+ + +M N T D
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNK--VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQA 434
+ N+MI G+ + G++++ DL +M +N ++N ++ GY++ + ++ ++++
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 435 MEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+ I ++ +SL+ G ++++ LK L G + D+ TF
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNS 546
L + + G D +A++++ + R + + V + + +
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
LI+G G AF ++M++ ++ P V M+ A + G A++ L + M++
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK-M 998
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+ P ++ L+ L + G + EA + V +N GL
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALEL---RVVMSNCGL 1035
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 159/670 (23%), Positives = 301/670 (44%), Gaps = 68/670 (10%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRN 97
LG+ GK+ EA + ++VTY +I K+ A+++F+KM + +
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE 153
V++ T++ + N ++ + + M + D ++ +++ + G +A + L+
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 154 LVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMP---VKDLV-SYNSMLAGYTQNG 206
++ D+ +N++I G + + DA ++F M VK +Y + Y ++G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 207 KMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWV 258
AL FEKM K N+V+ N + +G A+Q+F + + P++V++
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 259 TMLCGFARHGKITEARRLFDSM---PCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPH- 313
M+ +++ G+I EA +L M C+ +V+ N++I + ++DEA K+F+++
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 314 ---KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEA 366
V+++T++ G + GK+ EA E++ M K T L L + V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 367 SKMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK---KNSVSWNTMISGY 419
KM ++ D +N++I G ++G++ EA+ F QM K + V+ T++ G
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGV 687
Query: 420 AQAGQMDSAENI-----FQAMEERNIVSWNSLITGFLQNSLYFDAL---KSLVLMG--RE 469
+A ++ A I + ++ + W LI L + +A+ + LV G R+
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVES 528
G S L E K G L N LI + +E
Sbjct: 748 G----DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803
Query: 529 AEQVFTAIE---CV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
A+ VF ++ C+ D+ ++N L+ Y +G E F+ +K+M + E + +T ++S
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVK 641
AG + LDL+ ++ D P A Y L+D L + GRL EA + GM +
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 642 ANAGLWGSLL 651
N ++ L+
Sbjct: 924 PNCAIYNILI 933
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/601 (23%), Positives = 278/601 (46%), Gaps = 79/601 (13%)
Query: 48 KLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
K+G+++EA+++ S N +++ NS+I+ K ++ +A ++F +M + L V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL--- 152
++NT++AG N ++EA +LF+ M ++ + ++ + C + ++ A ++L
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 153 ---ELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP---VKDLVSYNSMLAGYTQNG 206
VPD +N++I G K GQ +A F+ M D V+ ++L G +
Sbjct: 635 MDMGCVPDVFT---YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 207 KM----GLALHFFEKMAEKNV-VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS----- 256
+ + +F A++ + W ++ + + +A E++ N +
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV-ANGICRDGDS 750
Query: 257 -WVTMLCGFARHGKITEARRLFDSMP-----CKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
V ++ +H ++ AR LF+ + ++N +I + I+ A +F++
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 311 LPH----KDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA----LMSGLIQTGR 362
+ D +++ +++ Y + GK+DE E+Y +M + A T ++SGL++ G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 363 VDEASKMFNQL-STRD---TIC-WNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWN 413
VD+A ++ L S RD T C + +I G +SGR+ EA LF M + N +N
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 414 TMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLI-----TGFLQNSL-YFDALKSL 463
+I+G+ +AG+ D+A +F+ M + ++ +++ L+ G + L YF LK
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK-- 988
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL-HEYILKSGYINDLFVSNALIAMYAK 522
G PD + + L +E G DL+ N+LI
Sbjct: 989 ----ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 523 CGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
G VE A +++ I+ L ++N+LI GY+L+G A+ ++ M++ P+ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 579 F 579
+
Sbjct: 1105 Y 1105
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 150/680 (22%), Positives = 302/680 (44%), Gaps = 75/680 (11%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L ++ ++++A+ +F N + TY I + K+G A + F+KM
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALMITCYTRKGKLEK 147
+ N+V+ N + EA ++F D+ D+ ++ +M+ CY++ G++++
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 148 ARELLELVPDKLESAC------WNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNS 197
A ++L+ + +E+ C NS+I K + +A K+F M L V+YN+
Sbjct: 522 A---IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 198 MLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN-- 251
+LAG +NGK+ A+ FE M +K N +++N + + +++ A ++ K+ +
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 252 --PNAVSWVTMLCGFARHGKITEARRLFDSMP---CKNVVSWNAMIAAYAQDLQIDEAVK 306
P+ ++ T++ G ++G++ EA F M + V+ ++ + I++A K
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 307 LFIKLPH-----KDGVSWSTIINGYIRVGKLDEA-----REVYNQMPCKDIAAETALMSG 356
+ + + W +I + +D A R V N + C+D ++ L+
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI-CRD--GDSILVPI 755
Query: 357 L---IQTGRVDEASKMFNQLSTRDT------ICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
+ + V A +F + T+D +N +I G ++ ++ A D+F Q+
Sbjct: 756 IRYSCKHNNVSGARTLFEKF-TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 408 NSV----SWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDA 459
+ ++N ++ Y ++G++D +++ M E N ++ N +I+G ++ DA
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 460 LKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
L LM P T+ QL E +L G + + N LI
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 519 MYAKCGRVESAEQVFTAI--ECV--DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
+ K G ++A +F + E V DL +++ L+ + G E FK++ + P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA--- 631
D V + +++ + + L LF M I P Y+ L+ LG G +EEA
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 632 FNVVRGMDVKANAGLWGSLL 651
+N ++ ++ N + +L+
Sbjct: 1055 YNEIQRAGLEPNVFTFNALI 1074
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 229/524 (43%), Gaps = 98/524 (18%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNS 72
++M MK K T V N + LGK GK++EA+ +F + K N +T+N+
Sbjct: 562 MRMKEMKLKPT--------VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLV----SWNTMIAGYLHNSMVEEASKLFDVMPE-- 126
+ KN +++ A ++ KM V ++NT+I G + N V+EA F M +
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 127 -RDNFSWALMITCYTRKGKLEKAREL----LELVPDKLESACWNSVIAGYAKKGQFSDA- 180
D + ++ + +E A ++ L D+ + W +I + +A
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 181 ---EKVFNLMPVKDLVSYNSMLAGYT-QNGKMGLALHFFEKMA-----EKNVVSWNLMVS 231
E++ +D S + Y+ ++ + A FEK + + ++NL++
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 793
Query: 232 GFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMP---CK- 283
G + + + A+ +F ++ + P+ ++ +L + + GKI E L+ M C+
Sbjct: 794 GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 853
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKL--------------PHKDGVS----------- 318
N ++ N +I+ + +D+A+ L+ L P DG+S
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 319 ---------------WSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQ 359
++ +ING+ + G+ D A ++ +M + D+ + L+ L
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 360 TGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV----- 410
GRVDE F +L D +C+N +I G +S R++EAL LF +M +
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 411 SWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGF 450
++N++I AG ++ A I+ ++ E N+ ++N+LI G+
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 152/753 (20%), Positives = 329/753 (43%), Gaps = 114/753 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
N +YN +I + K+ ++A +++ +M + +L ++++++ G ++ L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 122 DVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LESACWNSVIAGYAKK 174
M + + +++ + I R GK+ +A E+L+ + D+ + + +I
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 175 GQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSW 226
+ A++VF M D V+Y ++L ++ N + F+ +M + +VV++
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMP- 281
++V +G+ A + + + PN ++ T++CG R ++ +A LF +M
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 282 --------------------------------------CKNVVSWNAMIAAYAQDLQIDE 303
N+V+ NA + + A+ + E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 304 AVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQM---PCK-DIAAETALMS 355
A ++F L D V+++ ++ Y +VG++DEA ++ ++M C+ D+ +L++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 356 GLIQTGRVDEASKMF---NQLSTRDTIC-WNSMIAGFCQSGRMDEALDLFRQMPKK---- 407
L + RVDEA KMF ++ + T+ +N+++AG ++G++ EA++LF M +K
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 408 NSVSWNTMISGYAQAGQMDSA-ENIFQAMEE---RNIVSWNSLITGFLQNS------LYF 457
N++++NT+ + ++ A + +F+ M+ ++ ++N++I G ++N +F
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK--SGYINDLFVSNA 515
+K LV PD T + ++ L + +LF +
Sbjct: 667 HQMKKLVY-------PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 516 LIAMYAKCG---RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE- 571
+ ++ A+ G V +E++ C D S I Y+ + + + +++
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Query: 572 -VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
V P T+ ++ A + D+F V+ P Y+ L+D G+ G+++E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 631 AFNVVRGM---DVKANA----GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
F + + M + +AN + L+ A V L++ + M + P A Y
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL-YYDLMSDRDFSP-TACTYGP 896
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
L + +++GR E ++L M D G P C+
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLD--YGCRPNCA 927
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 215/440 (48%), Gaps = 47/440 (10%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEE 116
N I N+ T N MI+ F + K A + K+ + + ++NT+I G V E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 117 ASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIA 169
A L D M E D ++ ++ R G A +LL + + K + ++++I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 170 GYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---- 221
+ G A +F M K +V+YNS++ G + GK + M +
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLF 277
NV+++N+++ FV G L A +L++++ +PN +++ T++ G+ +++EA +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 278 DSM---PCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRV 329
D M C ++V++ ++I Y ++D+ +K+F + + + V++S ++ G+ +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 330 GKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICW 381
GK+ A E++ +M D+ L+ GL G++++A ++F L + +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
++I G C+ G++++A +LF +P K N +++ MISG + G + A + + MEE
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 438 R----NIVSWNSLITGFLQN 453
N ++N+LI L++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRD 556
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 130 FSWALMITCYTRKGKLEKARELLELV------PDKLESACWNSVIAGYAKKGQFSDAEKV 183
++ +MI C+ R K A +L V PD + +N++I G +G+ S+A +
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD---TTTFNTLIKGLFLEGKVSEAVVL 180
Query: 184 FNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN----VVSWNLMVSGFVN 235
+ M D+V+YNS++ G ++G LAL KM E+N V +++ ++
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 236 SGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVS 287
G + +A LF+++ + V++ +++ G + GK + L M + NV++
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQM- 342
+N ++ + ++ ++ EA +L+ ++ + + ++++T+++GY +L EA + + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 343 --PCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMD 395
C DI T+L+ G RVD+ K+F +S R + + ++ ++ GFCQSG++
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 396 EALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERN----IVSWNSLI 447
A +LF++M + +++ ++ G G+++ A IF+ +++ IV + ++I
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
G + DA + +G KP+ T+
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 208/426 (48%), Gaps = 66/426 (15%)
Query: 50 GKVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
GKV EAV R+ N ++VTYNS+++ ++G S A L KM +RN+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV------- 224
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLESAC- 163
+ D F+++ +I R G ++ A L E+ ++S+
Sbjct: 225 --------------------KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 164 -WNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+NS++ G K G+++D + M V +++++N +L + + GK+ A +++M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 219 AEK----NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKI 270
+ N++++N ++ G+ LS A + + + +P+ V++ +++ G+ ++
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTI 322
+ ++F ++ + N V+++ ++ + Q +I A +LF ++ D +++ +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 323 INGYIRVGKLDEAREVYNQMPCKD----IAAETALMSGLIQTGRVDEASKMFNQLSTR-- 376
++G GKL++A E++ + I T ++ G+ + G+V++A +F L +
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAEN 430
+ + + MI+G C+ G + EA L R+M + N ++NT+I + + G + ++
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 431 IFQAME 436
+ + M+
Sbjct: 565 LIEEMK 570
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 169/346 (48%), Gaps = 58/346 (16%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFD 91
V N + L K GK + + + + + N++T+N ++ VF K GK+ +A +L+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK 147
+M R N++++NT++ GY + + EA+ + D+M R+ S
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV-RNKCS---------------- 365
Query: 148 ARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYT 203
PD + + S+I GY + D KVF + V + V+Y+ ++ G+
Sbjct: 366 --------PDIVT---FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 204 QNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN----AV 255
Q+GK+ LA F++M +V+++ +++ G ++G L A ++FE + V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
+ T++ G + GK+ +A LF S+PCK NV+++ MI+ + + EA L K+
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 312 PHKDG-----VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+DG +++T+I ++R G L + ++ +M +A+ +
Sbjct: 535 -EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 193/462 (41%), Gaps = 76/462 (16%)
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFA---RHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
SS + F I N N + G + I + + S P ++V ++ +A A
Sbjct: 40 SSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIA 99
Query: 297 QDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQM------PCK 345
+ Q + + F K +G+ + + +IN + R K A V ++ P
Sbjct: 100 RTKQFNLVLD-FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP-- 156
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLF 401
D L+ GL G+V EA + +++ D + +NS++ G C+SG ALDL
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 402 RQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQN 453
R+M ++N +++T+I + G +D+A ++F+ ME + I V++NSL+ G +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ D L M P+ TF
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITF----------------------------------- 301
Query: 514 NALIAMYAKCGRVESAEQVF----TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
N L+ ++ K G+++ A +++ T ++I++N+L+ GY + EA M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL- 628
+ PD VTF ++ + G+ +F+ + + A YS LV + G++
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR-NISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 629 --EEAFNVVRGMDVKANAGLWGSLL-GAC---RVHKNLEIGE 664
EE F + V + +G LL G C ++ K LEI E
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 143/578 (24%), Positives = 264/578 (45%), Gaps = 82/578 (14%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
++E A R+ S + N+VT+ ++I+ F K G++ A LF M QR +L++++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESA 162
T+I GY M+ KLF S AL KG KL+
Sbjct: 326 TLIDGYFKAGMLGMGHKLF---------SQAL------HKGV-------------KLDVV 357
Query: 163 CWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKM----GLALHF 214
++S I Y K G + A V+ M + ++V+Y ++ G Q+G++ G+
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
++ E ++V+++ ++ GF G+L S L+E + P+ V + ++ G ++ G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF----IKLPHKDGVSWSTI 322
A R M + NVV +N++I + + + DEA+K+F I D +++T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 323 INGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMF-----N 371
+ I G+L+EA ++ +M P D A L+ + + ++F N
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEP--DALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDS 427
++S +C N +I + R+++A F + + + V++NTMI GY ++D
Sbjct: 596 KISADIAVC-NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654
Query: 428 AENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
AE IF+ ++ N V+ LI +N+ A++ +M +G KP+ T+
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC---V 539
+ +L E + + G + + +I K GRV+ A +F AI+
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 540 DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
D++++ LI GY G +EA ++ ML V PD +
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 143/645 (22%), Positives = 278/645 (43%), Gaps = 116/645 (17%)
Query: 48 KLGKVEEAVRVFSNTIHKNLV----TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+ G V++A+ +F + +V + M++ + ++ FDK+ + +
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217
Query: 104 MIAGYLHNSM-----VEEASKLFDVMPERDNFSWALMITCYTRKG----KLEKARELLEL 154
G++ +++ V +A ++ ER F ++ KG ++E A LL L
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMER-GFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 155 VPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGK 207
V D + ++I G+ K+G+ A +F +M + DL++Y++++ GY + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 208 MGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC- 262
+G+ F + K +VV ++ + +V SGDL++A ++++ MLC
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR-----------MLCQ 385
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVS 318
G + NVV++ +I QD +I EA ++ ++ + V+
Sbjct: 386 GIS-----------------PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 319 WSTIINGYIRVGKLDEAREVYNQM-----PCKDIAAETALMSGLIQTGRVDEA----SKM 369
+S++I+G+ + G L +Y M P D+ L+ GL + G + A KM
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQM 425
Q + + +NS+I G+C+ R DEAL +FR M K + ++ T++ G++
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 426 DSAENIFQAM----EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
+ A +F M E + +++ +LI F ++ KP
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKH-----------------MKP-------- 582
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC-- 538
+G QL + + ++ D+ V N +I + KC R+E A + F IE
Sbjct: 583 ----------TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 539 -VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD 597
D++++N++I GY EA + F+ + P+ VT ++ + +
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 598 LFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+F M E + +P A Y CL+D + +E +F + M K
Sbjct: 693 MFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 50/305 (16%)
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDAL 460
P N V++ T+I+G+ + G+MD A ++F+ ME+R I +++++LI G YF A
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG------YFKA- 334
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
G G +G++L L G D+ V ++ I +Y
Sbjct: 335 ------GMLG----------------------MGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 521 AKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
K G + +A V+ + C +++++ LI G +G EAF + Q+L + P
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA--FNV 634
VT+ ++ G G L++ M++ P Y LVD L + G + A F+V
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 635 -VRGMDVKANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSELEPHNASNYITLSNMHAEA 691
+ G ++ N ++ SL+ G CR+++ E + F M + ++P + + + T+ +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP-DVATFTTVMRVSIME 544
Query: 692 GRWEE 696
GR EE
Sbjct: 545 GRLEE 549
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 151/683 (22%), Positives = 296/683 (43%), Gaps = 119/683 (17%)
Query: 1 MFSSYSWDDTRGENHKIKM--------------TSMKHKLTIGSIGG-KHVFNKNQQIIH 45
+ + D R HKI TSM+ GS G +H F+ Q +I
Sbjct: 60 LLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLI- 118
Query: 46 LGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK-----------MS 94
GKLG E TI + L+ VF ++ IS R +DK +
Sbjct: 119 -GKLGANGEF-----KTIDRLLIQMKDEGIVFKESLFISIMRD-YDKAGFPGQTTRLMLE 171
Query: 95 QRNLVSWNTMIAGYLHNSMVE----------EASKLFDVMPERDN---FSWALMITCYTR 141
RN+ S Y N ++E A+ +D++ + F++ +++ +
Sbjct: 172 MRNVYSCEPTFKSY--NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 142 KGKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSDA----EKVFNLMPVKD 191
+++ A LL VP+ S + ++I +K + ++A E++F + V D
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPN---SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFE 247
++N ++ G + ++ A +M + +++ +++G G + +A+ LF
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 248 KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP-----CKNVVSWNAMIAAYAQDLQID 302
+IP P V + T++ GF HG++ +A+ + M +V ++N++I Y ++ +
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 303 EAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI 358
A+++ + +K + S++ +++G+ ++GK+DEA V N+M +
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP--------- 457
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNT 414
+T+ +N +I+ FC+ R+ EA+++FR+MP+K + ++N+
Sbjct: 458 ------------------NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 415 MISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+ISG + ++ A + + M N V++N+LI FL+ +A K + M +G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA- 529
D+ T+ L E +L+ G+ N LI + G VE A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 530 ---EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+++ D++++NSLI+G G + F+++ +E + PD VTF ++S
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 587 SHAGLANQGLDLFKCMVEDFAIE 609
G C++ D IE
Sbjct: 680 CKGGFVYDA-----CLLLDEGIE 697
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 221/507 (43%), Gaps = 71/507 (14%)
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKI 249
SYN +L +A + F M + + ++ +++ F ++ SA L +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 250 PN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQI 301
PN+V + T++ ++ ++ EA +L + M V ++N +I + +I
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 302 DEAVKL----FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
+EA K+ I+ D +++ ++NG ++G++D A++++ ++P +I L+ G
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 358 IQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KKN 408
+ GR+D+A + + + T D +NS+I G+ + G + AL++ M K N
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLV 464
S+ ++ G+ + G++D A N+ M + N V +N LI+ F + +A++
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
M R+G KPD TF + L ++ G + + N LI + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 525 RVESA-----EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS---------- 569
++ A E VF +D I++NSLI G G +A F++ML
Sbjct: 544 EIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 570 -------------EEVV------------PDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
EE V PD VTF +++ AG GL +F+ +
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEA 631
+ I P ++ L+ L + G + +A
Sbjct: 663 E-GIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 200/439 (45%), Gaps = 28/439 (6%)
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVY 339
+ ++ ++ A+ +ID A+ L + + V + T+I+ + +++EA ++
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 340 NQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
+M D ++ GL + R++EA+KM N++ R D I + ++ G C+
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 392 GRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSL 446
GR+D A DLF ++PK V +NT+I G+ G++D A+ + M ++ ++NSL
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
I G+ + L AL+ L M +G KP+ ++ + + G
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIE---C-VDLISWNSLISGYALNGYAIEAFK 562
+ N LI+ + K R+ A ++F + C D+ ++NSLISG A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE-HYSCLVDL 621
+ M+SE VV + VT+ +++A G + L MV F PL E Y+ L+
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITYNSLIKG 573
Query: 622 LGRMGRLEEAFNVVRGM--DVKANAGLWGSLL--GACRVHKNLEIGEFAAMRLSELEPHN 677
L R G +++A ++ M D A + + ++L G CR E EF + +
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 678 ASNYITLSNMHAEAGRWEE 696
+ +L N AGR E+
Sbjct: 634 IVTFNSLINGLCRAGRIED 652
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 254/597 (42%), Gaps = 103/597 (17%)
Query: 46 LGKLGKVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
L K GK+EEA+ RV + NL YN++I K K +A LFD+M + L
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL--- 398
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---K 158
++ +++++I + R+GKL+ A L + D K
Sbjct: 399 ------------------------RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 159 LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHF 214
L +NS+I G+ K G S AE M K L V+Y S++ GY GK+ AL
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 215 FEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR 266
+ +M K + ++ ++SG +G + A +LF ++ PN V++ M+ G+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 267 HGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKLPHK-----DGV 317
G +++A M K +V S+ +I Q EA K+F+ HK + +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEI 613
Query: 318 SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF----NQL 373
++ +++G+ R GKL+EA V +M + + + LI + K+F ++
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 374 STR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQM 425
R D + + SMI ++G EA ++ M + N V++ +I+G +AG +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
+ AE + M+ + V N + + ++ G
Sbjct: 734 NEAEVLCSKMQPVSSVP----------NQVTYGCFLDILTKGE----------------- 766
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI----ECVDL 541
Q +LH ILK G + + N LI + + GR+E A ++ T + D
Sbjct: 767 ---VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
I++ ++I+ +A + + M + + PD+V + ++ C AG + +L
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 130/623 (20%), Positives = 259/623 (41%), Gaps = 79/623 (12%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEAS 118
I ++ Y +I + +S A+++ M N+V +N +I G V EA
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
+ + +D L PD + + +++ G K +F
Sbjct: 283 GIKKDLAGKD-------------------------LKPDVVT---YCTLVYGLCKVQEFE 314
Query: 179 ------DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNL 228
D P + VS S++ G + GK+ AL+ +++ + N+ +N
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 229 MVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK- 283
++ A LF+++ PN V++ ++ F R GK+ A M
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 284 ---NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKLDEAR 336
+V +N++I + + I A ++ +K V++++++ GY GK+++A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 337 EVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGF 388
+Y++M K IA T L+SGL + G + +A K+FN+++ + + +N MI G+
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 389 CQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAME----ERNI 440
C+ G M +A + ++M +K ++ S+ +I G GQ A+ + E N
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
+ + L+ GF + +AL M + G D + ++ L +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI---ECV-DLISWNSLISGYALNGY 556
+ G D + ++I +K G + A ++ + CV + +++ ++I+G G+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ-GLDLFKCMVEDFAIEPLAEHY 615
EA +M VP+QVT+ L + + Q ++L +++ Y
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN--TATY 790
Query: 616 SCLVDLLGRMGRLEEAFNVVRGM 638
+ L+ R GR+EEA ++ M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRM 813
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/580 (20%), Positives = 245/580 (42%), Gaps = 85/580 (14%)
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKM 218
++ +I Y + + D VF +M K ++ + +++L G + GLA+ F M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 219 AEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEAR 274
+ + +G + S DLS A+++ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM------------------------- 253
Query: 275 RLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRV 329
++ C N+V +N +I + ++ EAV + L KD V++ T++ G +V
Sbjct: 254 ---EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 330 GKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKMFNQLS----TRDTICW 381
+ + E+ ++M C AA ++L+ GL + G+++EA + ++ + + +
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
N++I C+ + EA LF +M K N V+++ +I + + G++D+A + M +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 438 R----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
++ +NSLI G + A + M + +P T+
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLIS 549
+L+ + G ++ L++ + G + A ++F + + +++N +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ------GLDLFKCMV 603
GY G +AF+ K+M + +VPD ++ ++ G A++ GL C +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV-----RGMDVKANAGLWGSLLGACRVHK 658
+ Y+ L+ R G+LEEA +V RG+D+ + +G L+ HK
Sbjct: 611 NEIC-------YTGLLHGFCREGKLEEALSVCQEMVQRGVDL--DLVCYGVLIDGSLKHK 661
Query: 659 N--LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
+ L G M L+P + Y ++ + ++ G ++E
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVI-YTSMIDAKSKTGDFKE 700
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 227/465 (48%), Gaps = 57/465 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
N+ +YN +I + G+I +A L M + +++S++T++ GY +++ KL
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGY 171
+VM + +++ + +I R KL +A E ++PD + + ++I G+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD---TVVYTTLIDGF 361
Query: 172 AKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKM----AEKNV 223
K+G A K F M +D+ ++Y ++++G+ Q G M A F +M E +
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 224 VSWNLMVSGFVNSGDLSSA----RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
V++ +++G+ +G + A + + +PN V++ T++ G + G + A L
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 280 M------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRV 329
M P N+ ++N+++ + I+EAVKL + + D V+++T+++ Y +
Sbjct: 482 MWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 330 GKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICW 381
G++D+A+E+ +M K I LM+G G +++ K+ N + + + +
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
NS++ +C + A +++ M + + ++ ++ G+ +A M A +FQ M+
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 438 R----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ ++ +++ LI GFL+ + +A + M REG D+ F
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/561 (21%), Positives = 249/561 (44%), Gaps = 83/561 (14%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNTMIAGYLHNSMVEEASKL--FD 122
++ V G + +AR++F+KM LV S N + L + A+ + F
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT-RLSKDCYKTATAIIVFR 235
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELV------PDKLESACWNSVIAGYA 172
PE + S+ ++I + G++++A LL L+ PD + +++V+ GY
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS---YSTVVNGYC 292
Query: 173 KKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNV----V 224
+ G+ K+ +M K L Y S++ + K+ A F +M + + V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM 280
+ ++ GF GD+ +A + F ++ + P+ +++ ++ GF + G + EA +LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 281 PCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKL 332
CK + V++ +I Y + + +A ++ + + V+++T+I+G + G L
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 333 DEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWN 382
D A E+ ++M P +I ++++GL ++G ++EA K+ + DT+ +
Sbjct: 473 DSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
+++ +C+SG MD+A ++ ++M K + IV+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGL---------------------------QPTIVT 563
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
+N L+ GF + + D K L M +G P+ +TF + +++ +
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAI 558
G D L+ + K ++ A +F ++ V + +++ LI G+ +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 559 EAFKAFKQMLSEEVVPDQVTF 579
EA + F QM E + D+ F
Sbjct: 684 EAREVFDQMRREGLAADKEIF 704
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 209/472 (44%), Gaps = 43/472 (9%)
Query: 190 KDLVSYNSMLAGYTQNGKMGLA---LHFFEKMAE------KNVVSWNLMVSGFVNSGDLS 240
KDL S+++ + + K+ + + FF+ + + +++ V+ G L
Sbjct: 133 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR 192
Query: 241 SARQLFEKIPNPNAVSWV----TMLCGFARHG-KITEARRLFDSMP----CKNVVSWNAM 291
AR++FEK+ N V V L ++ K A +F P C NV S+N +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 292 IAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
I Q +I EA L + + K D +S+ST++NGY R G+LD+ ++ M K +
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 348 AAET-------ALMSGLIQTGRVDEA-SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ L+ + + +EA S+M Q DT+ + ++I GFC+ G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 400 LFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFL 451
F +M + + +++ +ISG+ Q G M A +F M E + V++ LI G+
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
+ DA + M + G P+ T+ N+L + K G ++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQM 567
N+++ K G +E A ++ E D +++ +L+ Y +G +A + K+M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 568 LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
L + + P VTF +++ G+ G L M+ I P A ++ LV
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLV 603
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 231/518 (44%), Gaps = 47/518 (9%)
Query: 175 GQFSDAEKVFNLMPVKDLV----SYNSMLAGYTQNG-KMGLALHFFEKMAEK----NVVS 225
G +A +VF M LV S N L +++ K A+ F + E NV S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 226 WNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N+++ G + A L K P+ +S+ T++ G+ R G++ + +L + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLD 333
K N + ++I + ++ EA + F ++ + D V ++T+I+G+ + G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 334 EAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A + + +M +DI + TA++SG Q G + EA K+F+++ + D++ + +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 386 AGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAM----EE 437
G+C++G M +A + M + N V++ T+I G + G +DSA + M +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
NI ++NS++ G ++ +A+K + G D T+ ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYAL 553
+ +L G + N L+ + G +E E++ + + ++NSL+ Y +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPLA 612
A +K M S V PD T+ ++ A + LF+ M + F++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS--V 666
Query: 613 EHYSCLVD-LLGRMGRLE--EAFNVVRGMDVKANAGLW 647
YS L+ L R LE E F+ +R + A+ ++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 165/346 (47%), Gaps = 43/346 (12%)
Query: 48 KLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
K G + A + F S I +++TY ++IS F + G + +A +LF +M + L V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE-- 153
++ +I GY +++A ++ + M + + ++ +I ++G L+ A ELL
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 154 ----LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
L P+ +NS++ G K G +A K+ D V+Y +++ Y ++
Sbjct: 483 WKIGLQPNIFT---YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 206 GKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSW 257
G+M A ++M K +V++N++++GF G L +L K PNA ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
+++ + + A ++ M + V ++ ++ + + + EA LF ++
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 314 KDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
K G S +S +I G+++ K EAREV++QM + +AA+ +
Sbjct: 660 K-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 170/394 (43%), Gaps = 51/394 (12%)
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
+ G L EAR V+ +M L GL+ + VD + +LS C+ + A
Sbjct: 186 VDFGLLREARRVFEKM----------LNYGLVLS--VDSCNVYLTRLSKD---CYKTATA 230
Query: 387 GFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER---- 438
+ +FR+ P+ N S+N +I Q G++ A ++ ME +
Sbjct: 231 -----------IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
+++S+++++ G+ + K + +M R+G KP+ + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALN 554
+++ G + D V LI + K G + +A + F + D++++ ++ISG+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G +EA K F +M + + PD VTF +++ AG + M++ P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLE-----IGEFA 666
Y+ L+D L + G L+ A ++ M ++ N + S++ N+E +GEF
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
A L+ + Y TL + + ++G ++ + +
Sbjct: 519 AAGLNA----DTVTYTTLMDAYCKSGEMDKAQEI 548
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 227/465 (48%), Gaps = 57/465 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
N+ +YN +I + G+I +A L M + +++S++T++ GY +++ KL
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGY 171
+VM + +++ + +I R KL +A E ++PD + + ++I G+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD---TVVYTTLIDGF 361
Query: 172 AKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKM----AEKNV 223
K+G A K F M +D+ ++Y ++++G+ Q G M A F +M E +
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 224 VSWNLMVSGFVNSGDLSSA----RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
V++ +++G+ +G + A + + +PN V++ T++ G + G + A L
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 280 M------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRV 329
M P N+ ++N+++ + I+EAVKL + + D V+++T+++ Y +
Sbjct: 482 MWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 330 GKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICW 381
G++D+A+E+ +M K I LM+G G +++ K+ N + + + +
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
NS++ +C + A +++ M + + ++ ++ G+ +A M A +FQ M+
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 438 R----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ ++ +++ LI GFL+ + +A + M REG D+ F
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/561 (21%), Positives = 249/561 (44%), Gaps = 83/561 (14%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNTMIAGYLHNSMVEEASKL--FD 122
++ V G + +AR++F+KM LV S N + L + A+ + F
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT-RLSKDCYKTATAIIVFR 235
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELV------PDKLESACWNSVIAGYA 172
PE + S+ ++I + G++++A LL L+ PD + +++V+ GY
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS---YSTVVNGYC 292
Query: 173 KKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNV----V 224
+ G+ K+ +M K L Y S++ + K+ A F +M + + V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM 280
+ ++ GF GD+ +A + F ++ + P+ +++ ++ GF + G + EA +LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 281 PCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKL 332
CK + V++ +I Y + + +A ++ + + V+++T+I+G + G L
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 333 DEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWN 382
D A E+ ++M P +I ++++GL ++G ++EA K+ + DT+ +
Sbjct: 473 DSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
+++ +C+SG MD+A ++ ++M K + IV+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGL---------------------------QPTIVT 563
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
+N L+ GF + + D K L M +G P+ +TF + +++ +
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAI 558
G D L+ + K ++ A +F ++ V + +++ LI G+ +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 559 EAFKAFKQMLSEEVVPDQVTF 579
EA + F QM E + D+ F
Sbjct: 684 EAREVFDQMRREGLAADKEIF 704
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 209/472 (44%), Gaps = 43/472 (9%)
Query: 190 KDLVSYNSMLAGYTQNGKMGLA---LHFFEKMAE------KNVVSWNLMVSGFVNSGDLS 240
KDL S+++ + + K+ + + FF+ + + +++ V+ G L
Sbjct: 133 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR 192
Query: 241 SARQLFEKIPNPNAVSWV----TMLCGFARHG-KITEARRLFDSMP----CKNVVSWNAM 291
AR++FEK+ N V V L ++ K A +F P C NV S+N +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 292 IAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDI 347
I Q +I EA L + + K D +S+ST++NGY R G+LD+ ++ M K +
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 348 AAET-------ALMSGLIQTGRVDEA-SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ L+ + + +EA S+M Q DT+ + ++I GFC+ G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 400 LFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFL 451
F +M + + +++ +ISG+ Q G M A +F M E + V++ LI G+
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
+ DA + M + G P+ T+ N+L + K G ++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQM 567
N+++ K G +E A ++ E D +++ +L+ Y +G +A + K+M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 568 LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
L + + P VTF +++ G+ G L M+ I P A ++ LV
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLV 603
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 231/518 (44%), Gaps = 47/518 (9%)
Query: 175 GQFSDAEKVFNLMPVKDLV----SYNSMLAGYTQNG-KMGLALHFFEKMAEK----NVVS 225
G +A +VF M LV S N L +++ K A+ F + E NV S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 226 WNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N+++ G + A L K P+ +S+ T++ G+ R G++ + +L + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLD 333
K N + ++I + ++ EA + F ++ + D V ++T+I+G+ + G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 334 EAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A + + +M +DI + TA++SG Q G + EA K+F+++ + D++ + +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 386 AGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAM----EE 437
G+C++G M +A + M + N V++ T+I G + G +DSA + M +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
NI ++NS++ G ++ +A+K + G D T+ ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYAL 553
+ +L G + N L+ + G +E E++ + + ++NSL+ Y +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPLA 612
A +K M S V PD T+ ++ A + LF+ M + F++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS--V 666
Query: 613 EHYSCLVD-LLGRMGRLE--EAFNVVRGMDVKANAGLW 647
YS L+ L R LE E F+ +R + A+ ++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 165/346 (47%), Gaps = 43/346 (12%)
Query: 48 KLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
K G + A + F S I +++TY ++IS F + G + +A +LF +M + L V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE-- 153
++ +I GY +++A ++ + M + + ++ +I ++G L+ A ELL
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 154 ----LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
L P+ +NS++ G K G +A K+ D V+Y +++ Y ++
Sbjct: 483 WKIGLQPNIFT---YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 206 GKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSW 257
G+M A ++M K +V++N++++GF G L +L K PNA ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
+++ + + A ++ M + V ++ ++ + + + EA LF ++
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 314 KDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
K G S +S +I G+++ K EAREV++QM + +AA+ +
Sbjct: 660 K-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 170/394 (43%), Gaps = 51/394 (12%)
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
+ G L EAR V+ +M L GL+ + VD + +LS C+ + A
Sbjct: 186 VDFGLLREARRVFEKM----------LNYGLVLS--VDSCNVYLTRLSKD---CYKTATA 230
Query: 387 GFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER---- 438
+ +FR+ P+ N S+N +I Q G++ A ++ ME +
Sbjct: 231 -----------IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
+++S+++++ G+ + K + +M R+G KP+ + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALN 554
+++ G + D V LI + K G + +A + F + D++++ ++ISG+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G +EA K F +M + + PD VTF +++ AG + M++ P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLE-----IGEFA 666
Y+ L+D L + G L+ A ++ M ++ N + S++ N+E +GEF
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
A L+ + Y TL + + ++G ++ + +
Sbjct: 519 AAGLNA----DTVTYTTLMDAYCKSGEMDKAQEI 548
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 226/478 (47%), Gaps = 47/478 (9%)
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKM- 218
+NSV++ K GQ AE + + MP D++SYNS++ G+ +NG + A E +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 219 ------AEKNVVSWNLMVSGFVNSGDLSSA---RQLFEKIPNPNAVSWVTMLCGFARHGK 269
+ ++VS+N + +GF L + K +PN V++ T + F + G+
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGE 178
Query: 270 ITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWST 321
+ A + F SM NVV++ +I Y + ++ AV L+ ++ + V+++
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEA----SKMFNQL 373
+I+G+ + G++ A E+Y++M + T ++ G Q G D A +KM NQ
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDSAE 429
D + +I+G C +G++ EA ++ M K + V + TM++ Y ++G+M +A
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 430 NIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
N++ + ER ++V+ +++I G +N +A+ + +K + +
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI-----EKANDVMYTVLIDAL 413
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDL 541
+L I ++G + D F+ + IA K G + A ++ T + +DL
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
+++ +LI G A G +EA + F +ML+ + PD F ++ A G DL
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 218/474 (45%), Gaps = 62/474 (13%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLF 90
H + N + + KLG+V+ A + + ++++YNS+I +NG I A +
Sbjct: 55 HRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVL 114
Query: 91 DKM-------SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE---RDNFSWALMITCYT 140
+ + + ++VS+N++ G+ M++E VM + + +++ I +
Sbjct: 115 ESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 141 RKGKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM-PVK--- 190
+ G+L+ A + L P+ + C +I GY K G A ++ M V+
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTC---LIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLF 246
++V+Y +++ G+ + G+M A + +M E N + + ++ GF GD +A +
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 247 EKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQD 298
K+ N + ++ ++ G +GK+ EA + + M ++V + M+ AY +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 299 LQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
++ AV ++ KL + D V+ ST+I+G + G+L EA + D+ T L+
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMY-TVLI 410
Query: 355 SGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK--- 407
L + G E ++F+++S D + S IAG C+ G + +A L +M ++
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Query: 408 -NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
+ +++ T+I G A G M A +F M L +G +S FD L
Sbjct: 471 LDLLAYTTLIYGLASKGLMVEARQVFDEM----------LNSGISPDSAVFDLL 514
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 189/381 (49%), Gaps = 36/381 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLF 121
N+VTY++ I F K+G++ A + F M + N+V++ +I GY +E A L+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 122 DVMPE----RDNFSWALMITCYTRKGKLEKARELL-ELVPDKLE--SACWNSVIAGYAKK 174
M + ++ +I + +KG++++A E+ +V D++E S + ++I G+ ++
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 175 GQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----W 226
G +A K M + D+ +Y +++G NGK+ A E M + ++V +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
M++ + SG + +A ++ K+ P+ V+ TM+ G A++G++ EA F +
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEK 400
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREV 338
N V + +I A ++ E +LF K+ D +++ I G + G L +A ++
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 339 YNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQ 390
+M + D+ A T L+ GL G + EA ++F+++ + D+ ++ +I + +
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Query: 391 SGRMDEALDLFRQMPKKNSVS 411
G M A DL M ++ V+
Sbjct: 521 EGNMAAASDLLLDMQRRGLVT 541
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 165/360 (45%), Gaps = 57/360 (15%)
Query: 48 KLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLV 99
K G +E AV ++ + N+VTY ++I F K G++ A +++ +M + N +
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV 155
+ T+I G+ + A K M + D ++ ++I+ GKL++A E++E
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE-- 327
Query: 156 PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
D EK +L+P D+V + +M+ Y ++G+M A++ +
Sbjct: 328 -----------------------DMEKS-DLVP--DMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 216 EKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
K+ E+ +VV+ + M+ G +G L A F I N V + ++ + G
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVMYTVLIDALCKEGDFI 420
Query: 272 EARRLFDSMPCKNVVS----WNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTII 323
E RLF + +V + + IA + + +A KL ++ + D ++++T+I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMFNQLSTRDTI 379
G G + EAR+V+++M I+ ++A+ LI+ G + AS + + R +
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 177/403 (43%), Gaps = 65/403 (16%)
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGKLDEAREVYNQM 342
S+N++++ + Q+ A + +P D +S++++I+G+ R G + A V +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 343 P------CK-DIAAETALMSGLIQTGRVDEA---SKMFNQLSTRDTICWNSMIAGFCQSG 392
CK DI + +L +G + +DE + + + + + +++ I FC+SG
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 393 RMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE----RNIVSWN 444
+ AL F M + N V++ +I GY +AG ++ A ++++ M N+V++
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
+LI GF + Q +++ +++
Sbjct: 238 ALIDGFCKKG-----------------------------------EMQRAEEMYSRMVED 262
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAI----ECVDLISWNSLISGYALNGYAIEA 560
+ V +I + + G ++A + + +D+ ++ +ISG NG EA
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVD 620
+ + M ++VPD V F M++A +G ++++ ++E EP S ++D
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMID 381
Query: 621 LLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA-CRVHKNLEI 662
+ + G+L EA +V KAN ++ L+ A C+ +E+
Sbjct: 382 GIAKNGQLHEA--IVYFCIEKANDVMYTVLIDALCKEGDFIEV 422
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 282/630 (44%), Gaps = 96/630 (15%)
Query: 70 YNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAG---YLHNSMVEEASKLFD 122
++ +S + GK A Q+F KM + NL++ NT++ G Y + + A ++FD
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 123 VMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDKL----ESACWNSVIAGYAKK 174
M + + ++ +++ Y +GKLE A +LE + + ++ +N+++ +KK
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 175 GQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SW 226
G+ SD +++ M V + V+YN+++ GY + G + A E M + NV+ ++
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N++++G N+G + +L + + + P+ V++ T++ G G EAR+L + M
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 283 KNV----VSWNAMIAAYAQDLQ---IDEAVKLFIKLP--HKDGVSWSTIINGYIRVGKLD 333
V V+ N + ++ + + VK + + D V++ T+I Y++VG L
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
A E+ +M K I KM +TI N+++ C+ +
Sbjct: 434 GALEMMREMGQKGI--------------------KM-------NTITLNTILDALCKERK 466
Query: 394 MDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNS 445
+DEA +L K+ + V++ T+I G+ + +++ A ++ M++ I ++NS
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI G + A++ + G PD STF + + + +K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC--VDLISWNSLISGYALNGYAIEAFK 562
+ D + N L+ K G E A F T IE VD +++N++IS + + EA+
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK-------CMVEDFAIE----PL 611
+M + + PD+ T+ +S G ++ +L K M D +E P
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPA 706
Query: 612 AEH-----------YSCLVDLLGRMGRLEE 630
YS ++D L GRL+E
Sbjct: 707 TSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 230/471 (48%), Gaps = 72/471 (15%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTM 104
LG +E V F ++ + VTYN+++ +K G++SD ++L M + L V++N +
Sbjct: 224 LGMLERMVSEFK--VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 105 IAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLE 160
+ GY ++EA ++ ++M + D ++ ++I G + RE LEL+
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM---REGLELM----- 333
Query: 161 SACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-- 218
DA K L P D+V+YN+++ G + G A E+M
Sbjct: 334 ------------------DAMKSLKLQP--DVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 219 --AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKIT 271
+ N V+ N+ + + + +++ + P+ V++ T++ + + G ++
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG-----VSWSTI 322
A + M K N ++ N ++ A ++ ++DEA L + HK G V++ T+
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL-LNSAHKRGFIVDEVTYGTL 492
Query: 323 INGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-- 376
I G+ R K+++A E++++M ++ +L+ GL G+ + A + F++L+
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
D +NS+I G+C+ GR+++A + + + K ++ + N +++G + G + A N
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 431 IFQAM-EERNI--VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
F + EER + V++N++I+ F ++ +A L M +G +PD+ T+
Sbjct: 613 FFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/627 (21%), Positives = 276/627 (44%), Gaps = 110/627 (17%)
Query: 72 SMISVFAKNGKISDARQL---FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERD 128
S++ + K +DA+ L + + S +L N+++ LH S + LFD+
Sbjct: 83 SVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLS-PPPSKALFDIA---- 137
Query: 129 NFSWALMITCYTRKGKLEKAREL------LELVPDKLESACWNSVIAG---YAKKGQFSD 179
++ Y +GK A ++ L+L P+ L C N+++ G Y S
Sbjct: 138 -------LSAYLHEGKPHVALQIFQKMIRLKLKPNLL--TC-NTLLIGLVRYPSSFSISS 187
Query: 180 AEKVFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLM 229
A +VF+ M VK ++ ++N ++ GY GK+ AL E+M + + V++N +
Sbjct: 188 AREVFDDM-VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
+ G LS ++L + PN V++ ++ G+ + G + EA ++ + M NV
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 286 V----SWNAMIAAYAQDLQIDEAVKLF-----IKLPHKDGVSWSTIINGYIRVGKLDEAR 336
+ ++N +I + E ++L +KL D V+++T+I+G +G EAR
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL-QPDVVTYNTLIDGCFELGLSLEAR 365
Query: 337 EVYNQMPCKDIAAETAL----MSGLIQTGRVDEASKMFNQLS-----TRDTICWNSMIAG 387
++ QM + A + L + + + ++ +L + D + ++++I
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 388 FCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNI--- 440
+ + G + AL++ R+M +K N+++ NT++ + ++D A N+ + +R
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 441 -VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
V++ +LI GF + AL+ M + P STF
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF--------------------- 524
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI----SWNSLISGYALNG 555
N+LI G+ E A + F + L+ ++NS+I GY G
Sbjct: 525 --------------NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
+AF+ + + + PD T +L+ G+ + L+ F ++E+ ++ + Y
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT--Y 628
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ ++ + +L+EA++++ M+ K
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKG 655
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 47/274 (17%)
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISG---YAQAGQMDSAENIFQAMEE 437
++ + G+ AL +F++M K N ++ NT++ G Y + + SA +F M +
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 438 ----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQ 492
N+ ++N L+ G+ DAL L M E K PD T+
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY-------------- 243
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
N + + + K G ++DL L+ K G V + +++N+L+ GY
Sbjct: 244 --NTILKAMSKKGRLSDL---KELLLDMKKNGLVPNR------------VTYNNLVYGYC 286
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
G EAF+ + M V+PD T+ +++ +AG +GL+L M + ++P
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM-KSLKLQPDV 345
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMD---VKAN 643
Y+ L+D +G EA ++ M+ VKAN
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 223/471 (47%), Gaps = 50/471 (10%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNS 112
++ ++ + L T+N ++ V K G + + +L DK+ +R NL ++N I G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 113 MVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLE--SACWN 165
++ A ++ + P+ D ++ +I + K ++A L ++V + LE S +N
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 166 SVIAGYAKKGQFSDAEK-----VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE---- 216
++IAGY K G AE+ VFN V D +Y S++ G G+ AL F
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGF-VPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCGFARHGKITE 272
K + NV+ +N ++ G N G + A QL EK P ++ ++ G + G +++
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 273 ARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF-IKLPH---KDGVSWSTIIN 324
A L M K ++ ++N +I Y+ L+++ A+++ + L + D ++++++N
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR---- 376
G + K ++ E Y M K A L+ L + ++DEA + ++ +
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENI 431
D + + ++I GFC++G +D A LFR+M + VS +N +I + + + AE +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 432 FQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
FQ M +R + ++ ++ GF + K L+ M G P +T
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/644 (19%), Positives = 278/644 (43%), Gaps = 66/644 (10%)
Query: 31 IGGKHVFNKNQQII----HLGKLGKVEEAVRVFSNTIHKNLV--TYNSMISVFAKNGKIS 84
+G KH + + +I + GK +EE + + +++ Y + + + GK+
Sbjct: 34 VGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQ 93
Query: 85 DARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMI 136
+A +F++M + + S+N +++ + + ++A K++ M +R D +S+ + +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 137 TCYTRKGKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKD-- 191
+ + + A LL + + + + +V+ G+ ++ ++ ++F M
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 192 --LVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQ- 244
L ++N +L + G + +K+ ++ N+ ++NL + G G+L A +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 245 ---LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQ 297
L E+ P P+ +++ ++ G ++ K EA M + + ++N +IA Y +
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 298 DLQIDEAVKL--------FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ A ++ F+ D ++ ++I+G G+ + A ++N+ K I
Sbjct: 334 GGMVQLAERIVGDAVFNGFVP----DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 350 ET----ALMSGLIQTGRVDEASKMFNQLSTRDTI----CWNSMIAGFCQSGRMDEALDLF 401
L+ GL G + EA+++ N++S + I +N ++ G C+ G + +A L
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 402 RQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQN 453
+ M K + ++N +I GY+ +M++A I M + ++ ++NSL+ G +
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
S + D +++ M +G P+ TF L E + D
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLIS-----WNSLISGYALNGYAIEAFKAFKQML 568
LI + K G ++ A +F +E +S +N +I + A K F++M+
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
+ PD T+ M+ G N G M+E+ I L
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 256/593 (43%), Gaps = 61/593 (10%)
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG--------YTQNGKMGLALHFF 215
+ SVI G+F E+V L+ +++ V N ML G Y + GK+ A++ F
Sbjct: 43 YRSVIEKLGYYGKFEAMEEV--LVDMRENVG-NHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 216 EKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARH 267
E+M E V S+N ++S V+SG A +++ ++ + P+ S+ + F +
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 268 GKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWS-TI 322
+ A RL ++M + NVV++ ++ + ++ E +LF K+ GVS +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSLCLST 218
Query: 323 INGYIRV----GKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKM----F 370
N +RV G + E ++ +++ + + + GL Q G +D A +M
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMD 426
Q D I +N++I G C++ + EA +M + +S ++NT+I+GY + G +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 427 SAENIFQAMEERNIV----SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
AE I V ++ SLI G AL +G KP+ +
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI----EC 538
QL + + G I ++ N L+ K G V A+ + +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D+ ++N LI GY+ A + ML V PD T+ +L+ ++
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLL-GAC 654
+K MVE P ++ L++ L R +L+EA ++ M V +A +G+L+ G C
Sbjct: 519 YKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
+ + +L+ G + R E E + S+ N+ A E+L V M +K
Sbjct: 578 K-NGDLD-GAYTLFRKME-EAYKVSSSTPTYNIIIHA----FTEKLNVTMAEK 623
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 177/386 (45%), Gaps = 66/386 (17%)
Query: 50 GKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV----SW 101
G+ A+ +F+ + K N++ YN++I + G I +A QL ++MS++ L+ ++
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD 157
N ++ G V +A L VM + D F++ ++I Y+ + K+E A E+L+++ D
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 158 K---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGL 210
+ +NS++ G K +F D + + M K +L ++N +L + K+
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 211 ALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
AL E+M K+V V++ ++ GF +GDL A LF
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR------------------- 590
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTI 322
K+ EA ++ S P ++N +I A+ + L + A KLF ++ + DG ++ +
Sbjct: 591 --KMEEAYKVSSSTP-----TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
++G+ + G ++ + +M E + L GRV N L D +
Sbjct: 644 VDGFCKTGNVNLGYKFLLEM------MENGFIPSLTTLGRV------INCLCVEDRVYEA 691
Query: 383 S-MIAGFCQSGRMDEALDLFRQMPKK 407
+ +I Q G + EA++ + KK
Sbjct: 692 AGIIHRMVQKGLVPEAVNTICDVDKK 717
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/527 (22%), Positives = 240/527 (45%), Gaps = 90/527 (17%)
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE-- 153
++N +I +S V+ A +LFD MPE+ + F++ +++ Y + G +K ELL
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 154 ----LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQN 205
++P+K+ +N++++ + ++G+ D+EK+ M V D+V++NS ++ +
Sbjct: 209 ESFGVLPNKV---IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265
Query: 206 GKMGLALHFFEKM--------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAV-- 255
GK+ A F M N +++NLM+ GF G L A+ LFE I + +
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 256 --SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFI 309
S+ L G RHGK EA + M K ++ S+N ++ + + +A K +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA-KTIV 384
Query: 310 KLPHKDG-----VSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQT 360
L ++G V++ +++GY VGK+D A+ + +M + L+ L +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 361 GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
GR+ EA ++ +++ + DT+ N ++ G C SG +D+A+++ + M S + +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL- 503
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
G + G +D +++ + +++++++L+ G + + +A M E +PD
Sbjct: 504 -GNSYIGLVD--DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ N I + K G++ SA +V +
Sbjct: 561 AY-----------------------------------NIFIHHFCKQGKISSAFRVLKDM 585
Query: 537 E---C-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
E C L ++NSLI G + E +M + + P+ T+
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 148/624 (23%), Positives = 280/624 (44%), Gaps = 82/624 (13%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLF 121
N V YN+++S F + G+ D+ ++ +KM + L V++N+ I+ V +AS++F
Sbjct: 216 NKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275
Query: 122 DVM--------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAK 173
M P ++ ++ LM+ + + G LE A+ L E + + + A
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA----------- 324
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLM 229
L SYN L G ++GK A ++M +K ++ S+N++
Sbjct: 325 -----------------SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM---PC 282
+ G G LS A+ + + P+AV++ +L G+ GK+ A+ L M C
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 283 -KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEARE 337
N + N ++ + + +I EA +L K+ K D V+ + I++G G+LD+A E
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ M AA L + I G VD++ N L D I +++++ G C++GR EA
Sbjct: 488 IVKGMRVHGSAALGNLGNSYI--GLVDDSLIENNCLP--DLITYSTLLNGLCKAGRFAEA 543
Query: 398 LDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE----RNIVSWNSLITG 449
+LF +M + +SV++N I + + G++ SA + + ME+ +++ ++NSLI G
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
+ F+ + M +G P+ T+ + L + +++ +
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 510 LFVSNALIAMYAKCGRVESAEQVF-TAI------ECVDLISWNSLISGYALNGYAIEAFK 562
+F LI + K + A++VF TA+ E + + +N L++ G ++A +
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLLKATE 719
Query: 563 AFKQMLSEEVVPDQVTFIGML-SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+ +L + ++ S C L L K + + +P A ++D
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAA--LMPVIDG 777
Query: 622 LGRMGRLEEAFNVVRGMDVKANAG 645
LG+MG +EA + M A+ G
Sbjct: 778 LGKMGNKKEANSFADKMMEMASVG 801
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 193/479 (40%), Gaps = 111/479 (23%)
Query: 255 VSWV---TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKL 311
VSW+ +LCG A ++N +I A +D A +LF ++
Sbjct: 131 VSWLYKDMVLCGIAPQ-----------------TYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 312 PHK----DGVSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTG 361
P K + ++ ++ GY + G D+ E+ N M P K I ++S + G
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIY--NTIVSSFCREG 231
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM--------DEALDLFRQMPKKNS 409
R D++ KM ++ D + +NS I+ C+ G++ D LD + +P+ NS
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERN------------------------------ 439
+++N M+ G+ + G ++ A+ +F+++ E +
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 440 ---------IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
I S+N L+ G + + DA + LM R G PD T+
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNS 546
L + ++++ + + + N L+ K GR+ AE++ + +D ++ N
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 547 LISGYALNG---YAIEAFKAFK--------------------QMLSEEVVPDQVTFIGML 583
++ G +G AIE K + ++ +PD +T+ +L
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ AG + +LF M+ + ++P + Y+ + + G++ AF V++ M+ K
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 43 IIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR-- 96
I H K GK+ A RV + HK+L TYNS+I +I + L D+M ++
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 97 --NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARE 150
N+ ++NT I VE+A+ L D M ++ + FS+ +I + + + A+E
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 151 LLE 153
+ E
Sbjct: 686 VFE 688
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 146/676 (21%), Positives = 314/676 (46%), Gaps = 93/676 (13%)
Query: 14 NHKIKMTSMKHKLT-IGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVF----SNTIHKNLV 68
NH M ++ ++ +G H+F I K G+V+ A+ + S+++ ++V
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFT--TLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVM 124
YN I F K GK+ A + F ++ L V++ +MI + ++EA ++F+ +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 125 PERD----NFSWALMITCYTRKGKLEKARELLEL------VPDKLESACWNSVIAGYAKK 174
+ +++ MI Y GK ++A LLE +P + +N ++ K
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI---AYNCILTCLRKM 356
Query: 175 GQFSDAEKVFNLM---PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWN 227
G+ +A KVF M +L +YN ++ + GK+ A + M + NV + N
Sbjct: 357 GKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 228 LMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
+MV S L A +FE K+ P+ +++ +++ G + G++ +A ++++ M
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 281 PCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYI----RVGKLDEA 335
C+ N + + ++I + + ++ K++ + +++ ++N Y+ + G+ ++
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 336 REVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAG 387
R ++ ++ + D + + L+ GLI+ G +E ++F + + DT +N +I G
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 388 FCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAME----ERN 439
FC+ G++++A L +M K V++ ++I G A+ ++D A +F+ + E N
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+V ++SLI GF + +A L + ++G P+ T+ N L +
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW----------------NSLLD 700
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV-DLISWNSLISGYALNGYAI 558
++K+ IN+ AL+ Q ++C + +++ LI+G
Sbjct: 701 ALVKAEEINE-----ALVCF-----------QSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
+AF +++M + + P +++ M+S + AG + LF + + P + Y+ +
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAM 803
Query: 619 VDLLGRMGRLEEAFNV 634
++ L R +AF++
Sbjct: 804 IEGLSNGNRAMDAFSL 819
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/581 (21%), Positives = 264/581 (45%), Gaps = 54/581 (9%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I GK+GKV+ A + F +N + + VTY SMI V K ++ +A ++F+ + +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 96 RNLV----SWNTMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEK 147
V ++NTMI GY +EA L + + + ++ ++TC + GK+++
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 148 ARELLELVPDKLES--ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLV----SYNSMLAG 201
A ++ E + + +N +I + G+ A ++ + M L + N M+
Sbjct: 362 ALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 202 YTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PN 253
++ K+ A FE+M K + +++ ++ G G + A +++EK+ + N
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL----QIDEAVKLFI 309
++ + +++ F HG+ + +++ M +N ++ Y + + ++ +F
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 310 KLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTG 361
++ + D S+S +I+G I+ G +E E++ M + D A ++ G + G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWN 413
+V++A ++ ++ T+ + + S+I G + R+DEA LF + K N V ++
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 414 TMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
++I G+ + G++D A I + + ++ N+ +WNSL+ ++ +AL M
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
P+Q T+ + + K G +I+ AK G + A
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 530 EQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQ 566
+F + D +N++I G + A++AF F++
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 234/494 (47%), Gaps = 56/494 (11%)
Query: 29 GSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFS---NTIHKNLVTYNSMISVFAKNGKISD 85
GSI V N + L K+GKV+EA++VF NL TYN +I + + GK+
Sbjct: 338 GSI--PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 86 ARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMIT 137
A +L D M + N+ + N M+ + ++EA +F+ M + D ++ +I
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 138 CYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVF------NLMP 188
+ G+++ A ++ E + D + S + S+I + G+ D K++ N P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQ 244
DL N+ + + G+ FE++ + V S+++++ G + +G + +
Sbjct: 516 --DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 245 LFEKIPNPNAV----SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYA 296
LF + V ++ ++ GF + GK+ +A +L + M K VV++ ++I A
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 297 QDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE-- 350
+ ++DEA LF + K + V +S++I+G+ +VG++DEA + ++ K +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 351 --TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+L+ L++ ++EA F + T + + + +I G C+ + ++A +++M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 405 PKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS----WNSLITGFLQNSLY 456
K+ +++S+ TMISG A+AG + A +F + V +N++I G +
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 457 FDALKSLVLMGREG 470
DA R G
Sbjct: 814 MDAFSLFEETRRRG 827
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 285/668 (42%), Gaps = 79/668 (11%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNL-VSWNTMIAGYLHNSMVEEASKLFDVMPER 127
+YNS++ V A+ Q+ +MS S NT I L + + +DV+
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 128 DNFSWALMITCYTRK----GKLEKARELLELVPDKLESA------CWNSVIAGYAKKGQF 177
F + + YT + + +L L E + ++I G+AK+G+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 178 SDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLM 229
A + + M D+V YN + + + GK+ +A FF ++ + + V++ M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-- 283
+ + L A ++FE + P ++ TM+ G+ GK EA L + K
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 284 --NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST---IINGYIRVGKLDEAREV 338
+V+++N ++ + ++DEA+K+F ++ + ST +I+ R GKLD A E+
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 339 YNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
+ M + + +F + T N M+ C+S ++DEA
Sbjct: 400 RDSM----------------------QKAGLFPNVRT-----VNIMVDRLCKSQKLDEAC 432
Query: 399 DLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGF 450
+F +M K + +++ ++I G + G++D A +++ M + N + + SLI F
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
+ D K M + PD + G + E I ++ D
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIE---CV-DLISWNSLISGYALNGYAIEAFKAFKQ 566
+ LI K G ++F +++ CV D ++N +I G+ G +A++ ++
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M ++ P VT+ ++ + ++ LF+ + IE YS L+D G++G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 627 RLEEAFNVVRGMDVKA---NAGLWGSLLGACRVHKNLEIGE----FAAMRLSELEPHNAS 679
R++EA+ ++ + K N W SLL A + K EI E F +M+ + P+ +
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDA--LVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 680 NYITLSNM 687
I ++ +
Sbjct: 730 YGILINGL 737
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 46 LGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----N 97
L K+ +++EA +F S I N+V Y+S+I F K G+I +A + +++ Q+ N
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE 153
L +WN+++ + + EA F M E + ++ ++I + K KA +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 154 LVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNG 206
+ K + + ++I+G AK G ++A +F+ V D YN+M+ G +
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 207 KMGLALHFFEKMAEKNVVSWN 227
+ A FE+ + + N
Sbjct: 812 RAMDAFSLFEETRRRGLPIHN 832
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 210/451 (46%), Gaps = 82/451 (18%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLF 121
+ VT++++I+ G++S+A +L D+M + L++ N ++ G N V +A L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 122 DVM------PERDNFSWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYA 172
D M P + L + C + G+ A ELL + + KL++ ++ +I G
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMC--KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 173 KKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVV 224
K G +A +FN M +K D++ Y +++ G+ G+ M ++ +VV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++ ++ FV G L A +L +++ +P+ V++ +++ GF + ++ +A + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 281 PCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKL 332
K N+ ++N +I Y + ID+ ++LF K+ + D V+++T+I G+ +GKL
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 333 DEAREVYNQMPCK----DIAAETALMSGLIQTG--------------------------- 361
+ A+E++ +M + DI + L+ GL G
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 362 --------RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK--- 406
+VD+A +F L + D +N MI G C+ G + EA LFR+M +
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 407 -KNSVSWNTMISGYAQAGQMDSAENIFQAME 436
N ++N +I + G + + + ++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 230/479 (48%), Gaps = 51/479 (10%)
Query: 51 KVEEAVRVFSNTIHKN----LVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
K ++AV +F L+ ++ + SV A+ + L +M + NL + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 103 TMIAGYLHNSMVEEA----SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD- 157
MI + A K+ + E D +++ +I +G++ +A EL++ + +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 158 --KLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLA 211
K N+++ G G+ SDA + + M V+Y +L ++G+ LA
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 212 LHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCG 263
+ KM E+ + V +++++ G G L +A LF ++ + + + T++ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----D 315
F G+ + +L M + +VV+++A+I + ++ ++ EA +L ++ + D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 316 GVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFN 371
V+++++I+G+ + +LD+A + + M K +I L++G + +D+ ++F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 372 QLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAG 423
++S R DT+ +N++I GFC+ G+++ A +LF++M + + VS+ ++ G G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 424 QMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ + A IF+ +E E +I +N +I G S DA + +G KPD T+
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 194/420 (46%), Gaps = 36/420 (8%)
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARR 275
E + V+++ +++G G +S A +L +++ P ++ ++ G +GK+++A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 276 LFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIING 325
L D M P N V++ ++ + Q A++L K+ + D V +S II+G
Sbjct: 199 LIDRMVETGFQP--NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 326 YIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----D 377
+ G LD A ++N+M K DI T L+ G GR D+ +K+ + R D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQ 433
+ ++++I F + G++ EA +L ++M ++ ++V++ ++I G+ + Q+D A ++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 434 AMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
M + NI ++N LI G+ + +L D L+ M G D T+
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWN 545
+V +L + ++ D+ L+ G E A ++F IE +D+ +N
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+I G +A+ F + + V PD T+ M+ G ++ LF+ M ED
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 193/463 (41%), Gaps = 63/463 (13%)
Query: 275 RLFDSMP-CKNVVSWNAMIAAYAQDLQIDEAVKLFIKL----PHKDGVSWSTIINGYIRV 329
R+F S+ K VS+ + + D++ D+AV LF ++ P + +S + + R
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 330 GKLDEAREVYNQMPCKDIAAETALMSGLIQTG-RVDEASKMFNQLST-------RDTICW 381
+ D ++ QM K IA +S +I R + S F+ + DT+ +
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 382 NSMIAGFCQSGRMD---EALDLFRQMPKKNS-VSWNTMISGYAQAGQMDSAENIFQAMEE 437
+++I G C GR+ E +D +M K + ++ N +++G G++ A + M E
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
TGF N + + + L +M + G+ ++ ++
Sbjct: 206 ----------TGFQPNEVTYGPV--LKVMCKSGQ---------------TALAMELLRKM 238
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYAL 553
E +K + + + L K G +++A +F +E D+I + +LI G+
Sbjct: 239 EERKIKLDAVKYSIIIDGL----CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G + K + M+ ++ PD V F ++ G + +L K M++ I P
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTV 353
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKA---NAGLWGSLL-GACR---VHKNLEIGEFA 666
Y+ L+D + +L++A +++ M K N + L+ G C+ + LE+ F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL--FR 411
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
M L + + Y TL E G+ E + L M +R
Sbjct: 412 KMSLRGVVADTVT-YNTLIQGFCELGKLEVAKELFQEMVSRRV 453
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 158/732 (21%), Positives = 321/732 (43%), Gaps = 98/732 (13%)
Query: 54 EAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW------------ 101
E VRVF V ++ ++ V+A+ G + +A +FD M +
Sbjct: 143 ELVRVFKEFSFSPTV-FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 102 ---NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK----ARELLEL 154
+A ++++ M+ F+V P D F+ ++++ Y R G ++K A+E
Sbjct: 202 RKGENFVALHVYDQMIS-----FEVSP--DVFTCSIVVNAYCRSGNVDKAMVFAKETESS 254
Query: 155 VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGL 210
+ +L +NS+I GYA G +V LM +++V+Y S++ GY + G M
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 211 ALHFFEKMAEKNVVS----WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLC 262
A H FE + EK +V+ + +++ G+ +G + A ++ + + N +++
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 263 GFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDG 316
G+ + G++ EA ++F M P + ++N ++ Y + +DEA+KL ++ K+
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHH--TYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 317 V----SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASK 368
V +++ ++ GY R+G + ++ M + + A+ + L+ L + G +EA K
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 369 MFNQLSTR----DTICWNSMIAGFCQSGRMDEA------LDLFRQMPKKNSVSWNTMISG 418
++ + R DTI N MI+G C+ +++EA +++FR P ++ + G
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ--TYQALSHG 550
Query: 419 YAQAGQMDSAENIFQAMEERNIVS----WNSLITGFLQNSLYFDALKSLVLMGR-EGKKP 473
Y + G + A + + ME + I +N+LI+G + + + + LV+ R G P
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR-HLNKVADLVIELRARGLTP 609
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
+T+ +++ G ++ + + + + +++ A +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 534 TAIECVDLISWNSLISGYA-----LNGYAIEAFKAFKQMLSEE-------VVPDQVTFIG 581
I + ++ L+ GY L A K K S E +VP+ + +
Sbjct: 670 QKI-----VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNV 724
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
++ AG LF ++ P Y+ L+ G + +AF + M +K
Sbjct: 725 AIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 642 A---NAGLWGSLL-GACRVHKNLEIGEFAAMRLSE--LEPHNASNYITLSNMHAEAGRWE 695
N + +L+ G C++ N++ + +L + + P NA Y TL + ++G
Sbjct: 785 GIIPNIVTYNALIKGLCKL-GNVDRAQRLLHKLPQKGITP-NAITYNTLIDGLVKSGNVA 842
Query: 696 EVERLRVLMRDK 707
E RL+ M +K
Sbjct: 843 EAMRLKEKMIEK 854
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 144/669 (21%), Positives = 282/669 (42%), Gaps = 117/669 (17%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLF 90
+V N I +G VE RV + +N+VTY S+I + K G + +A +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 91 DKMSQRNLVS----WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
+ + ++ LV+ + ++ GY + +A ++ D M E
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE-------------------- 359
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGY 202
+ + + NS+I GY K GQ +AE++F+ M D +YN+++ GY
Sbjct: 360 --------IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 203 TQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGD----LSSARQLFEKIPNPNA 254
+ G + AL ++M +K VV ++N+++ G+ G LS + + ++ N +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEA------ 304
+S T+L + G EA +L++++ + + ++ N MI+ + +++EA
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 305 VKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQT 360
V +F P ++ + +GY +VG L EA V M K I L+SG +
Sbjct: 532 VNIFRCKPAVQ--TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 361 GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
+++ + + +L R + ++I G+C G +D+A +M +K ++ N I
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK-GITLNVNI 648
Query: 417 -----SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+ + ++D A + Q IV ++ L+ G+ + +A + L
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQ-----KIVDFDLLLPGYQSLKEFLEASATTCL------ 697
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
++ + K + + V N IA K G++E A +
Sbjct: 698 -----------------KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK 740
Query: 532 VFTAIECVDLI-----SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+F+ + D ++ LI G A+ G +AF +M + ++P+ VT+ ++
Sbjct: 741 LFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN---------VVRG 637
G ++ L + + I P A Y+ L+D L + G + EA +VRG
Sbjct: 801 CKLGNVDRAQRLLHKLPQK-GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Query: 638 MDVKANAGL 646
D + + +
Sbjct: 860 SDKQGDVDI 868
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 198/466 (42%), Gaps = 88/466 (18%)
Query: 48 KLGKVEEAVRVFSNTIHKNLV----TYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
+ G V+EA+++ K +V TYN ++ +++ G D L+ M +R + +
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE-- 153
S +T++ EA KL++ + R D + +MI+ + K+ +A+E+L+
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 154 -LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVS----YNSMLAG---YTQN 205
+ K + ++ GY K G +A V M K + YN++++G Y
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 206 GKMG-LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA-RQLFEKIP-----NPNAVSWV 258
K+ L + + V ++ +++G+ N G + A FE I N N S +
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 259 T------------------------MLCGFARHGKITEA------------RRLFDSMPC 282
+L G+ + EA + +S P
Sbjct: 653 ANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPK 712
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWSTIINGYIRVGKLD 333
K N + +N IA + ++++A KLF L D +++ +I+G G ++
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 334 EAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMI 385
+A + ++M K +I AL+ GL + G VD A ++ ++L T + I +N++I
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
G +SG + EA+ L +M +K ++ G + G +D + +
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKG------LVRGSDKQGDVDIPKEV 872
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 255/577 (44%), Gaps = 77/577 (13%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN----SMVEEASKLFDVM 124
++++ SV G + +A Q F KM + + G LH ++ + F M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 125 ----PERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGYAKK 174
F++ +MI C ++G +E AR L E LVPD + +NS+I G+ K
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD---TVTYNSMIDGFGKV 310
Query: 175 GQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSW 226
G+ D E++ ++ D+++YN+++ + + GK+ + L F+ +M + NVVS+
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
+ +V F G + A + + + PN ++ +++ + G +++A RL + M
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-L 429
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM 342
+ V WN V+++ +I+G ++ EA E++ +M
Sbjct: 430 QVGVEWNV--------------------------VTYTALIDGLCDAERMKEAEELFGKM 463
Query: 343 PC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM 394
++A+ AL+ G ++ +D A ++ N+L R D + + + I G C ++
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 395 DEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSL 446
+ A + +M K NS+ + T++ Y ++G ++ M+E +I V++ L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 447 ITGFLQNSLYFDALKSLVLMGRE-GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
I G +N L A+ + + G + + + F + L E +++ G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAF 561
+ D +L+ K G V A + + + DL+++ SL+ G + +A
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
++M+ E + PD+V I +L G ++ ++L
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 216/489 (44%), Gaps = 77/489 (15%)
Query: 35 HVFNKNQQ---IIH-LGKLGKVEEAVRVFSNTI----HKNLVTYNSMISVFAKNGKISDA 86
VF K + ++H KLGK ++ R F + I + TYN MI K G + A
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281
Query: 87 RQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALMITC 138
R LF++M R L V++N+MI G+ +++ F D+ E D ++ +I C
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 139 YTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
+ + GKL P LE F K L P ++VSY+++
Sbjct: 342 FCKFGKL----------PIGLE----------------FYREMKGNGLKP--NVVSYSTL 373
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP-- 252
+ + + G M A+ F+ M +V ++ ++ G+LS A +L ++
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 253 --NAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVK 306
N V++ ++ G ++ EA LF M N+ S+NA+I + + +D A++
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 307 LFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLI 358
L +L + D + + T I G + K++ A+ V N+M I A T LM
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 359 QTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNS 409
++G E + +++ D + + +I G C++ + +A+D F ++ + N+
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYFDALKSLVL 465
+ MI G + Q+++A +F+ M ++ +V ++ SL+ G + +AL
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 466 MGREGKKPD 474
M G K D
Sbjct: 674 MAEIGMKLD 682
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 192/445 (43%), Gaps = 32/445 (7%)
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM- 280
++ + S ++ G L A Q F K+ P S +L FA+ GK + +R F M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLD 333
V ++N MI ++ ++ A LF ++ + D V+++++I+G+ +VG+LD
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 334 EAREVYNQMP---CK-DIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMI 385
+ + +M C+ D+ AL++ + G++ + + ++ + + +++++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 386 AGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSA----ENIFQAMEE 437
FC+ G M +A+ + M + N ++ ++I + G + A + Q E
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
N+V++ +LI G +A + M G P+ +++ +L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI-EC---VDLISWNSLISGYAL 553
+ G DL + I ++E+A+ V + EC + + + +L+ Y
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
+G E +M ++ VTF ++ L ++ +D F + DF ++ A
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGM 638
++ ++D L + ++E A + M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQM 639
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 138/588 (23%), Positives = 261/588 (44%), Gaps = 85/588 (14%)
Query: 41 QQIIHLGKLGK-VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
Q + L +GK +E R+ + I+ ++ YN +I K +++DA QLFD+M R
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 97 -NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
+L+++NT+I GY E++ K+ + M + D+ +L+
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERM-KADHIEPSLIT------------------- 286
Query: 156 PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLA 211
+N+++ G K G DAE V M V D +++ + GY+ N K A
Sbjct: 287 --------FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCG 263
L +E + N + +++++ G + A ++ K PN V + TM+ G
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 264 FARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVS- 318
+ R G + AR ++M + + +++N +I + + +++ A K K+ K GVS
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSP 457
Query: 319 ----WSTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMF 370
++ +I GY R + D+ ++ +M ++ + L++ L + ++ EA +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 371 NQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQA 422
+ R +N +I G C G++++A ++M KK N V++NT+I G +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 423 GQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVL---MGREGKKPDQ 475
G++ AE++ + + ++ ++NSLI+G+ + + + L M R G KP
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA----EQ 531
T+ E LK DL V N ++ YA G +E A +Q
Sbjct: 635 KTYHLLISLCTKEGIELTERLFGEMSLKP----DLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
+ +D ++NSLI G G E +M + E+ P+ T+
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/571 (22%), Positives = 252/571 (44%), Gaps = 76/571 (13%)
Query: 164 WNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+N +I G K + +DAE++F+ M + L++YN+++ GY + G + E+M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 220 ----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKIT 271
E +++++N ++ G +G + A + +++ + P+A ++ + G++ + K
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 272 EARRLF----DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK------LPHKDGVSWST 321
A ++ DS N + + ++ A ++ +I++A ++ + +P++ V ++T
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE--VIYNT 394
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
+I+GY R G L AR + M Q D + +
Sbjct: 395 MIDGYCRKGDLVGARM---------------------------KIEAMEKQGMKPDHLAY 427
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKN---SV-SWNTMISGYAQAGQMDSAENIFQAMEE 437
N +I FC+ G M+ A +M K SV ++N +I GY + + D +I + ME+
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 438 R----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
N+VS+ +LI + S +A M G P + +
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLIS 549
+ + +LK G +L N LI + G++ AE + I D+ ++NSLIS
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
GY G +++M + P T+ ++S C+ +G++L + + + +++
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT-----KEGIELTERLFGEMSLK 662
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL----WGSL-LGACRVHKNLEIGE 664
P Y+ ++ G +E+AFN+ + M ++ + GL + SL LG +V K E+
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQM-IEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 665 FA-AMRLSELEPHNASNYITLSNMHAEAGRW 694
M E+EP A Y + H E +
Sbjct: 722 LIDEMNAREMEPE-ADTYNIIVKGHCEVKDY 751
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 39/230 (16%)
Query: 50 GKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSW 101
GK+E+A R + K NLVTYN++I + GK+S+A L ++S++ L ++
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKAREL---LE 153
N++I+GY V+ L++ M +R ++ L+I+ T++G +E L +
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS 660
Query: 154 LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK-------DLVSYNSMLAGYTQNG 206
L PD L +N V+ YA G D EK FNL D +YNS++ G + G
Sbjct: 661 LKPDLL---VYNGVLHCYAVHG---DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 207 KMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSA----RQLFEK 248
K+ ++M E ++N++V G D SA R++ EK
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFK 565
+F+ N LI K R+ AEQ+F + LI++N+LI GY G ++FK +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M ++ + P +TF +L AG+ ++ K M +D P A +S L D
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSN 332
Query: 626 GRLEEAFNVVR-GMD--VKANAGLWGSLLGA-CRVHK 658
+ E A V +D VK NA LL A C+ K
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 220/459 (47%), Gaps = 77/459 (16%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEAS 118
I ++T+N+M+ K G + +++ +M +RN+ V++N +I G+ N +EEA
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 119 KL--------FDVMPERDNFSWALMITCYTRKGKLEKA----RELLE--LVPDKLESACW 164
+ F V P +S+ +I Y ++G + A E+L + P ++ +
Sbjct: 294 RFHGDMRRSGFAVTP----YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP---TTSTY 346
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AE 220
N I G+ DA ++ + M D+VSYN+++ GY + GK A F+ +
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRL 276
++V++N ++ G SG+L A++L E++ P+ +++ T++ GF ++G ++ A +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAR 336
+D M K + DG +++T G +R+G D+A
Sbjct: 467 YDEMLRKGI---------------------------KPDGYAYTTRAVGELRLGDSDKAF 499
Query: 337 EVYNQM-----PCKDIAAETALMSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAG 387
++ +M D+ + GL + G + +A K+F D + + ++I G
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 388 FCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----N 439
+ ++G+ A +L+ +M +K + +++ +I G+A+AG+++ A M++R N
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+++ N+L+ G + +A + L M EG P++ ++
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 216/442 (48%), Gaps = 54/442 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLV---- 99
K G +E +++ +N+ VTYN +I+ F+KNGK+ +AR+ M +
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKARELLE 153
S+N +I GY + ++A + D M P ++ + C G+++ ARELL
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC--DFGRIDDARELLS 367
Query: 154 --LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVKD----LVSYNSMLAGYTQNGK 207
PD + +N+++ GY K G+F +A +F+ + D +V+YN+++ G ++G
Sbjct: 368 SMAAPDVVS---YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 208 MGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVT 259
+ A E+M + +V+++ +V GFV +G+LS A ++++++ P+ ++ T
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 260 MLCGFARHGKITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEAV----KLFIK 310
G R G +A RL + M ++ +N I + + +A+ K+F
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 311 LPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEA 366
D V+++T+I GY+ G+ AR +Y++M K + L+ G + GR+++A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 367 SKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISG 418
+ ++ R + + N+++ G C++G +DEA +M ++ N S+ +IS
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 419 YAQAGQMDSAENIFQAMEERNI 440
+ + +++ M ++ I
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEI 686
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 240/543 (44%), Gaps = 95/543 (17%)
Query: 90 FDKMSQRNLV----SWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCY 139
F+KM ++ + + N ++ + M+ +AS +++ +MP F+ ++ +C+
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN-TMLDSCF 249
Query: 140 TRKGKLEKAREL-LELVPDKLE--SACWNSVIAGYAKKGQFSDAEKV--------FNLMP 188
+ G LE+ ++ LE+ +E +N +I G++K G+ +A + F + P
Sbjct: 250 -KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP 308
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQ 244
S+N ++ GY + G A ++M + ++N+ + + G + AR+
Sbjct: 309 Y----SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQ 300
L + P+ VS+ T++ G+ + GK EA LFD + ++V++N +I +
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 301 IDEAVKL----FIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIA----AETA 352
++ A +L +L D ++++T++ G+++ G L A EVY++M K I A T
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 353 LMSGLIQTGRVDEASKMFNQL-----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
G ++ G D+A ++ ++ D +N I G C+ G + +A++ R++ +
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 407 ---KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDA 459
+ V++ T+I GY + GQ A N++ M + +++++ LI G + A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
+ M + G +P+ T NAL+
Sbjct: 605 FQYSTEMKKRGVRPNVMT-----------------------------------HNALLYG 629
Query: 520 YAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
K G ++ A + +E + S+ LIS E K +K+ML +E+ PD
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Query: 576 QVT 578
T
Sbjct: 690 GYT 692
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 194/453 (42%), Gaps = 28/453 (6%)
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKLDEA 335
MP V+++N M+ + + ++ K+++++ ++ V+++ +ING+ + GK++EA
Sbjct: 235 MP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 336 REVYNQMPCKDIAAE----TALMSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAG 387
R + M A L+ G + G D+A +M N T +N I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSW 443
C GR+D+A +L M + VS+NT++ GY + G+ A +F + +IV++
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N+LI G ++ A + M + PD T+ + ++++ +L+
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 504 SGYINDLFVSNALIAMYAKCGRVESA-----EQVFTAIECVDLISWNSLISGYALNGYAI 558
G D + + G + A E V T DL +N I G G +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
+A + +++ +VPD VT+ ++ G +L+ M+ + P Y L
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVL 591
Query: 619 VDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLL-GACRVHKNLEIGEFAAMRLSELE 674
+ + GRLE+AF M V+ N +LL G C+ E + E
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
P N +Y L + + + +WEEV +L M DK
Sbjct: 652 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 170/368 (46%), Gaps = 46/368 (12%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----Q 95
N I L G++++A + S+ ++V+YN+++ + K GK +A LFD +
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKAREL 151
++V++NT+I G + +E A +L + M + D ++ ++ + + G L A E+
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 152 LE------LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP--------VKDLVSYNS 197
+ + PD + + G + G D++K F L DL YN
Sbjct: 467 YDEMLRKGIKPD---GYAYTTRAVGELRLG---DSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 198 MLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-- 251
+ G + G + A+ F K+ + V++ ++ G++ +G AR L++++
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 252 --PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAV 305
P+ +++ ++ G A+ G++ +A + M + NV++ NA++ + IDEA
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 306 KLFIKLPHKDGV-----SWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
+ K+ ++G+ S++ +I+ K +E ++Y +M K+I + L +
Sbjct: 641 RYLCKM-EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 699
Query: 361 GRVDEASK 368
D S+
Sbjct: 700 LEKDHESR 707
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 230/460 (50%), Gaps = 55/460 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
++ +Y+++I+ AK GK+ DA +LFD+MS+R ++ +N +I G+L + A +L+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 122 DVMPERDNF-----SWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAK 173
D + E + + +MI+ ++ G+++ ++ E + + + ++S+I G
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---NVVSW 226
G AE VFN + + D+V+YN+ML G+ + GK+ +L + M K N+VS+
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY 362
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N+++ G + +G + A ++ +P + ++ + G +G + +A + +
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWST-----IINGYIRVGKLD 333
+V ++ ++I + +++EA L +K K GV ++ +I G IR +L
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNL-VKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 334 EAREVYNQM---PCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
EA +M C+ + + L+ GL + G+ EAS ++ D ++ ++
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER--- 438
G C+ ++D AL+L+ Q + + + N +I G G++D A + ME R
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 439 -NIVSWNSLITGFLQNSLYFDALKSLVLMG---REGKKPD 474
N+V++N+L+ GF + D+ ++ V+ G + G +PD
Sbjct: 602 ANLVTYNTLMEGFFKVG---DSNRATVIWGYMYKMGLQPD 638
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 230/517 (44%), Gaps = 46/517 (8%)
Query: 166 SVIAGYAKKGQFSDAEKVFNLM-------PVKDLVSYNSMLAGYTQNG---KMGLALHFF 215
SVI Y K A VF M P + SYN++L + + K+ +F
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPA--IRSYNTLLNAFVEAKQWVKVESLFAYF 140
Query: 216 EKMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKI 270
E N+ ++N+++ + AR + + P+ S+ T++ A+ GK+
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 271 TEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGV-----SWST 321
+A LFD M +V +N +I + ++ A++L+ +L V + +
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 322 IINGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR- 376
+I+G + G++D+ +++ +M KD+ ++L+ GL G VD+A +FN+L R
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 377 ---DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS---VSWNTMISGYAQAGQMDSAEN 430
D + +N+M+ GFC+ G++ E+L+L+R M KNS VS+N +I G + G++D A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATM 380
Query: 431 IFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
I++ M + + ++ I G N AL + + G D +
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI---EC-VDLI 542
+ + L + + K G + V NALI + R+ A + C ++
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
S+N LI G G EA K+ML PD T+ +L + L+L+
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
++ +E ++ L+ L +G+L++A V+ M+
Sbjct: 561 LQS-GLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 228/469 (48%), Gaps = 57/469 (12%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFD 91
VF+ + I L K GK+++A+ +F + ++ YN +I F K A +L+D
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 92 KMSQ-----RNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRK 142
++ + N+ + N MI+G V++ K+++ M E+D ++++ +I
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 143 GKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVK---DLVSYN 196
G ++KA + + ++ ++ +N+++ G+ + G+ ++ +++ +M K ++VSYN
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP 252
++ G +NGK+ A + M K + ++ + + G +G ++ A + +++ +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 253 ----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEA 304
+ ++ +++ + ++ EA L M V NA+I +D ++ EA
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 305 VKLFIKLPHKDG-----VSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAAETAL 353
F++ K+G VS++ +I G + GK EA +M P D+ + L
Sbjct: 484 -SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP--DLKTYSIL 540
Query: 354 MSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
+ GL + ++D A ++++Q D + N +I G C G++D+A+ + M +N
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 410 ----VSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGF 450
V++NT++ G+ + G + A I+ M + +I+S+N+++ G
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 61/368 (16%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKN---LVTYNSMISVFAKNGKISDARQLFDK 92
V N + + GK++E++ ++ HKN +V+YN +I +NGKI +A ++
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 93 MSQRNLVSWNTMIAGYLHNSMVE-EASKLFDVMPE-------RDNFSWALMITCYTRKGK 144
M + + T ++H V +K VM E D +++A +I C +K +
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 145 LEKARELLELVPD---KLESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNS 197
LE+A L++ + +L S N++I G + + +A M +VSYN
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 198 MLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSW 257
++ G + GK G A F ++M E W P+ ++
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLEN---GW------------------------KPDLKTY 537
Query: 258 VTMLCGFARHGKITEARRL----FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPH 313
+LCG R KI A L S +V+ N +I ++D+A+ + + H
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 314 KDG----VSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRV 363
++ V+++T++ G+ +VG + A ++ M P DI + +M GL V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP--DIISYNTIMKGLCMCRGV 655
Query: 364 DEASKMFN 371
A + F+
Sbjct: 656 SYAMEFFD 663
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/585 (22%), Positives = 265/585 (45%), Gaps = 57/585 (9%)
Query: 87 RQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRK 142
R++ + + N VS + ++ Y+ A + +M +R + ++ +++ R
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 143 GKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DL 192
+ KA LL L+PD +N+VI G+ + + A ++ N M L
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFS---YNTVIRGFCEGKELEKALELANEMKGSGCSWSL 212
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
V++ ++ + + GKM A+ F ++M E ++V + ++ GF + G+L + LF++
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 249 I----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQ 300
+ +P A+++ T++ GF + G++ EA +F+ M + NV ++ +I +
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 301 IDEAVKLFIKLPHKD----GVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETA 352
EA++L + KD V+++ IIN + G + +A E+ M + D
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 353 LMSGLIQTGRVDEASKMF------NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
L+ GL G +DEASK+ + + D I +N++I G C+ R+ +ALD++ + +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 407 K----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYFD 458
K + V+ N +++ +AG ++ A +++ + + IV ++ ++I GF + +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A L M +P + +L E + + D+ N +I
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 519 MYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
K G ++SAE + + DL +++ LI+ + GY EA F +M+ P
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
D +L C G ++ +L K +V+ + L + +C V
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIV--LDKELTCTV 675
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 209/451 (46%), Gaps = 70/451 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
+LVT+ +I F K GK+ +A +M + +LV + ++I G+ ++ LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFSDAE 181
D + ER + A+ +N++I G+ K GQ +A
Sbjct: 271 DEVLERGDSPCAIT----------------------------YNTLIRGFCKLGQLKEAS 302
Query: 182 KVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGF 233
++F M + ++ +Y ++ G GK AL M EK N V++N++++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 234 VNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLF------DSMPCK 283
G ++ A ++ E + P+ +++ +L G G + EA +L S
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVY 339
+V+S+NA+I ++ ++ +A+ ++ L K D V+ + ++N ++ G +++A E++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 340 NQMPCKDIA----AETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQS 391
Q+ I TA++ G +TG ++ A + ++ + +N +++ C+
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 392 GRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSW 443
G +D+A LF +M + N+ VS+N MI G +AG + SAE++ M ++ ++
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+ LI FL+ +A+ M G +PD
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 211/492 (42%), Gaps = 58/492 (11%)
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSG 232
FS K+ + VS + +L Y Q K G A M ++ NV + N+++ G
Sbjct: 92 FSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKG 151
Query: 233 FVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
+ + A L ++ P+ S+ T++ GF ++ +A L + M SW
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC-SW 210
Query: 289 NAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPC---- 344
+ V+W +I+ + + GK+DEA +M
Sbjct: 211 SL--------------------------VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTIC---WNSMIAGFCQSGRMDEALDL 400
D+ T+L+ G G +D +F+++ R D+ C +N++I GFC+ G++ EA ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 401 FRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFLQ 452
F M ++ N ++ +I G G+ A + M EE N V++N +I +
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-SGYIN-DL 510
+ L DA++ + LM + +PD T+ ++L +LK S Y + D+
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 511 FVSNALIAMYAKCGRVESAEQVFT----AIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
NALI K R+ A ++ + D ++ N L++ G +A + +KQ
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+ ++V + T+ M+ G+ N L C + ++P Y+CL+ L + G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL-CKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 627 RLEEAFNVVRGM 638
L++A+ + M
Sbjct: 544 SLDQAWRLFEEM 555
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 207/420 (49%), Gaps = 52/420 (12%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDV 123
+TYN++I F K G++ +A ++F+ M +R N+ ++ +I G +EA +L ++
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 124 MPERDN----FSWALMITCYTRKGKLEKARELLELV------PDKLESACWNSVIAGYAK 173
M E+D ++ ++I + G + A E++EL+ PD + +N ++ G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT---YNILLGGLCA 399
Query: 174 KGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NV 223
KG +A K+ LM D++SYN+++ G + ++ AL ++ + EK +
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDS 279
V+ N++++ + +GD++ A +L+++I + N+ ++ M+ GF + G + A+ L
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 280 MPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPH----KDGVSWSTIINGYIRVGK 331
M +V +N ++++ ++ +D+A +LF ++ D VS++ +I+G ++ G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 332 LDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNS 383
+ A + M D+ + L++ ++ G +DEA F+++ D +S
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 384 MIAGFCQSGRMDEALDLFRQMPKKNSV-----SWNTMISGYAQAGQMDSAENIFQAMEER 438
++ G D+ +L +++ K+ V + M + MD A+ + + +++
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 226/536 (42%), Gaps = 86/536 (16%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAV 255
N+++A ++ LA F+ KM E + F+N LS + + ++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDT---------FINFVSLSGLLECYVQMRKT--- 123
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK- 314
GFA +R F NV + N ++ ++L+ +AV L ++
Sbjct: 124 -------GFAFGVLALMLKRGF----AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 315 ---DGVSWSTIINGYIRVGKLDEAREVYNQMP---CK-DIAAETALMSGLIQTGRVDEAS 367
D S++T+I G+ +L++A E+ N+M C + L+ + G++DEA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 368 KMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGY 419
++ D + + S+I GFC G +D LF ++ ++ ++++NT+I G+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 420 AQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
+ GQ+ A IF+ M ER N+ ++ LI G +AL+ L LM + ++P+
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-- 533
T+ ++ E + K D N L+ G ++ A ++
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 534 ----TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
++ D+IS+N+LI G +A + ++ + D+VT +L++ A
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
G N+ ++L+K + D I ++ Y+ ++D + G L NV +G+ K
Sbjct: 473 GDVNKAMELWK-QISDSKIVRNSDTYTAMIDGFCKTGML----NVAKGLLCK-------- 519
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG------RWEEVER 699
MR+SEL+P LS++ E +EE++R
Sbjct: 520 ------------------MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 168/731 (22%), Positives = 307/731 (41%), Gaps = 131/731 (17%)
Query: 5 YSWDDTRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVF----S 60
Y D R N K + +K+KL IG N + L + G V+E +V+
Sbjct: 161 YVLDLCRKMN-KDERFELKYKLIIGCY--------NTLLNSLARFGLVDEMKQVYMEMLE 211
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEE 116
+ + N+ TYN M++ + K G + +A Q K+ + L ++ ++I GY ++
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 117 ASKLFDVMP----ERDNFSWALMI--TCYTRK---------------------------- 142
A K+F+ MP R+ ++ +I C R+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 143 --GKLEKARELLELVPDKLESA------CWNSVIAGYAKKGQFSDAEKVF------NLMP 188
E+ E L LV + E+ + +I + +F A ++ LMP
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSG---DLSS 241
++++YN+++ GY + G + A+ E M + N ++N ++ G+ S +
Sbjct: 392 --NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV 449
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQ 297
++ E+ P+ V++ +++ G R G A RL M + +V ++ +MI + +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 298 DLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET-- 351
+++EA LF L K + V ++ +I+GY + GK+DEA + +M K+ +
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 352 --ALMSGLIQTGRVDEAS----KMFNQLSTRDTICWNS-MIAGFCQSGRMDEALDLFRQM 404
AL+ GL G++ EA+ KM ++ + T+ ++ +I + G D A F+QM
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 405 ----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGF---LQN 453
K ++ ++ T I Y + G++ AE++ M E ++ +++SLI G+ Q
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ FD LK M G +P Q TF L +++L+ Y
Sbjct: 689 NFAFDVLKR---MRDTGCEPSQHTFL----------------SLIKHLLEMKYGKQKGSE 729
Query: 514 NALIAMYAKC---GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
L AM VE E++ + S+ LI G G A K F M
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 571 E-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG--RMGR 627
E + P ++ F +LS C N+ + M+ + L + SC V + G + G
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI---CVGHLPQLESCKVLICGLYKKGE 846
Query: 628 LEEAFNVVRGM 638
E +V + +
Sbjct: 847 KERGTSVFQNL 857
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 157/727 (21%), Positives = 287/727 (39%), Gaps = 175/727 (24%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLF 90
+++ N+ + KLG VEEA + S + L TY S+I + + + A ++F
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 91 DKMS----QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF---------------- 130
++M +RN V++ +I G ++EA LF M + + F
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 131 -----------------------SWALMITCYTRKGKLEKARELLE------LVPDKLES 161
++ ++I + K EKARELL L+P+ +
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT- 395
Query: 162 ACWNSVIAGYAKKGQFSDAEKVFNLMPVKDLV----SYNSMLAGYTQNG---KMGLALHF 214
+N++I GY K+G DA V LM + L +YN ++ GY ++ MG+
Sbjct: 396 --YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF---------------------------- 246
E+ +VV++N ++ G SG+ SA +L
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 247 -----------EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
+K NPN V + ++ G+ + GK+ EA + + M KN
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC---------- 563
Query: 296 AQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAA 349
LP + ++++ +I+G GKL EA + +M P ++
Sbjct: 564 ---------------LP--NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP--TVST 604
Query: 350 ETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+T L+ L++ G D A F Q+ + D + + I +C+ GR+ +A D+ +M
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM- 663
Query: 406 KKNSVS-----WNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQ---- 452
++N VS ++++I GY GQ + A ++ + M E + ++ SLI L+
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 453 -------------NSLYFDALKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
N + FD + L+ M P+ ++ +V ++
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 499 EYILKS-GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYAL 553
+++ ++ G V NAL++ K + A +V + CV L S LI G
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G F+ +L D++ + ++ GL +LF M E + ++
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM-EKNGCKFSSQ 902
Query: 614 HYSCLVD 620
YS L++
Sbjct: 903 TYSLLIE 909
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 170/364 (46%), Gaps = 26/364 (7%)
Query: 319 WSTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
++T++N R G +DE ++VY +M C +I +++G + G V+EA++ +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 375 T----RDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMD 426
D + S+I G+CQ +D A +F +MP ++N V++ +I G A ++D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 427 SAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
A ++F M++ + ++ LI + +AL + M G KP+ T+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+ +L +L+ G + ++ NALI Y K G +E A V +E L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 543 ----SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
++N LI GY + +A +ML +V+PD VT+ ++ +G + L
Sbjct: 426 PNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLL-GAC 654
M D + P Y+ ++D L + R+EEA F+ + V N ++ +L+ G C
Sbjct: 485 LSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 655 RVHK 658
+ K
Sbjct: 544 KAGK 547
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/587 (21%), Positives = 258/587 (43%), Gaps = 84/587 (14%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNL 98
++ + K EA V + ++ + + I+ F K GK+ +A +LF KM + N+
Sbjct: 236 LVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNV 295
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLEL 154
V++NT+I G +EA + M ER ++++++ TR ++ A +L+
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 155 VPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
+ K +N++I + + G + A ++ +LM K L +YN+++ GY +NG+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE-----------KIPNPNAVS 256
A ++M + +N+ F + L + +F+ + +P
Sbjct: 416 ADNAERLLKEMLS---IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKLP 312
T++ G +HGK ++A L+ K V + NA++ + ++DEA ++ ++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 313 HK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVD 364
+ D VS++T+I+G KLDEA ++M + + + + L+ GL +V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 365 EASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA + ++ D ++ MI G C++ R +E + F +M K N+V +N +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y ++G++ A + + M+ + I P+ +
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGI-------------------------------SPNSA 681
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ + L E + G ++F ALI Y K G++ E + +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 537 ECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
++ I++ +I GYA +G EA + +M + +VPD +T+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/606 (20%), Positives = 269/606 (44%), Gaps = 61/606 (10%)
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPE---RDNFSWALMITCYTRKGKLEKARELLELV 155
+ N ++ + + ++ + FDV+ + D + + I + + GK+E+A +L
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF--- 283
Query: 156 PDKLESA-------CWNSVIAGYAKKGQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQ 204
K+E A +N+VI G G++ +A EK+ L++Y+ ++ G T+
Sbjct: 284 -SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 205 NGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQ----LFEKIPNPNAVS 256
++G A ++M +K NV+ +N ++ F+ +G L+ A + + K + + +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 257 WVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVK----LF 308
+ T++ G+ ++G+ A RL M N S+ ++I L D A++ +
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 309 IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVD 364
++ G +T+I+G + GK +A E++ Q K +T AL+ GL + G++D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 365 EASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA ++ ++ R D + +N++I+G C ++DEA +M K+ ++ +++ +I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 417 SGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
G +++ A + + ++ +++ +I G + + + M + +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ + + +L E + G + +LI + RVE A+ +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 533 FTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
F + ++ + +LI GY G ++ ++M S+ V P+++T+ M+ +
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL-- 646
G + L M E I P + Y + + G + EAF +G D + A +
Sbjct: 763 DGNVTEASRLLNEMREK-GIVPDSITYKEFIYGYLKQGGVLEAF---KGSDEENYAAIIE 818
Query: 647 -WGSLL 651
W L+
Sbjct: 819 GWNKLI 824
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 154/318 (48%), Gaps = 42/318 (13%)
Query: 43 IIH-LGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
++H L + GK++EA R+ + + + V+YN++IS K+ +A D+M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 98 L----VSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEK 147
L +++ +I G + + VEEA + +D ++P D +++++MI + + E+
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEE 628
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
+E + + K + +N +I Y + G+ S A ++ M K + +Y S++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 201 GYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIPNP 252
G + ++ A FE+M E NV + ++ G+ G + R++ K +P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLF 308
N +++ M+ G+AR G +TEA RL + M K +V ++ I Y + + EA K
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK-- 806
Query: 309 IKLPHKDGVSWSTIINGY 326
D +++ II G+
Sbjct: 807 ----GSDEENYAAIIEGW 820
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/587 (21%), Positives = 258/587 (43%), Gaps = 84/587 (14%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNL 98
++ + K EA V + ++ + + I+ F K GK+ +A +LF KM + N+
Sbjct: 236 LVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNV 295
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLEL 154
V++NT+I G +EA + M ER ++++++ TR ++ A +L+
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 155 VPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
+ K +N++I + + G + A ++ +LM K L +YN+++ GY +NG+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE-----------KIPNPNAVS 256
A ++M + +N+ F + L + +F+ + +P
Sbjct: 416 ADNAERLLKEMLS---IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKLP 312
T++ G +HGK ++A L+ K V + NA++ + ++DEA ++ ++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 313 HK----DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVD 364
+ D VS++T+I+G KLDEA ++M + + + + L+ GL +V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 365 EASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA + ++ D ++ MI G C++ R +E + F +M K N+V +N +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y ++G++ A + + M+ + I P+ +
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGI-------------------------------SPNSA 681
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ + L E + G ++F ALI Y K G++ E + +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 537 ECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
++ I++ +I GYA +G EA + +M + +VPD +T+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/606 (20%), Positives = 269/606 (44%), Gaps = 61/606 (10%)
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPE---RDNFSWALMITCYTRKGKLEKARELLELV 155
+ N ++ + + ++ + FDV+ + D + + I + + GK+E+A +L
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF--- 283
Query: 156 PDKLESA-------CWNSVIAGYAKKGQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQ 204
K+E A +N+VI G G++ +A EK+ L++Y+ ++ G T+
Sbjct: 284 -SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 205 NGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQ----LFEKIPNPNAVS 256
++G A ++M +K NV+ +N ++ F+ +G L+ A + + K + + +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 257 WVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVK----LF 308
+ T++ G+ ++G+ A RL M N S+ ++I L D A++ +
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 309 IKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVD 364
++ G +T+I+G + GK +A E++ Q K +T AL+ GL + G++D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 365 EASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA ++ ++ R D + +N++I+G C ++DEA +M K+ ++ +++ +I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 417 SGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
G +++ A + + ++ +++ +I G + + + M + +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ + + +L E + G + +LI + RVE A+ +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 533 FTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
F + ++ + +LI GY G ++ ++M S+ V P+++T+ M+ +
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL-- 646
G + L M E I P + Y + + G + EAF +G D + A +
Sbjct: 763 DGNVTEASRLLNEMREK-GIVPDSITYKEFIYGYLKQGGVLEAF---KGSDEENYAAIIE 818
Query: 647 -WGSLL 651
W L+
Sbjct: 819 GWNKLI 824
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 154/318 (48%), Gaps = 42/318 (13%)
Query: 43 IIH-LGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
++H L + GK++EA R+ + + + V+YN++IS K+ +A D+M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 98 L----VSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEK 147
L +++ +I G + + VEEA + +D ++P D +++++MI + + E+
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEE 628
Query: 148 ARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
+E + + K + +N +I Y + G+ S A ++ M K + +Y S++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 201 GYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIPNP 252
G + ++ A FE+M E NV + ++ G+ G + R++ K +P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLF 308
N +++ M+ G+AR G +TEA RL + M K +V ++ I Y + + EA K
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK-- 806
Query: 309 IKLPHKDGVSWSTIINGY 326
D +++ II G+
Sbjct: 807 ----GSDEENYAAIIEGW 820
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 134/625 (21%), Positives = 271/625 (43%), Gaps = 134/625 (21%)
Query: 11 RGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIH-----K 65
R EN K+ ++ H L H + ++ G + +AV ++ +
Sbjct: 126 RNENVKLTHEALSHVL--------HAYAES---------GSLSKAVEIYDYVVELYDSVP 168
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+++ NS++S+ K+ ++ DAR+++D+M R
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRG---------------------------D 201
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLESACWNSVIAGYAKKGQFSD 179
DN+S +++ +GK+E R+L+E +P+ + +N++I GY K G +
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIV---FYNTIIGGYCKLGDIEN 258
Query: 180 AEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK--NVVSW---NLMV 230
A VF + +K L ++ +M+ G+ + G + ++ E+ V W N++
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 231 SGFVNSGDLSSARQLFEKIPN---PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV- 286
+ + + + A + I N P+ ++ ++ + GK A D K ++
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
Query: 287 ---SWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTIINGYIRVGKLDEAREVY 339
S+ +I AY + + D A KL +++ + D V++ +I+G + G +D+A +
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 340 NQMPCKDIAAETA----LMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
++ + ++ + A LMSGL +TGR A +F+++ R D + ++I GF +S
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 392 GRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SW 443
G DEA +F + K + V N MI G+ ++G +D A M E ++V ++
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
+++I G+++ A+K M + KP+ T+
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY------------------------- 593
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIE 559
+LI + G + AE+ F ++ DL +++ +LI A +E
Sbjct: 594 ----------TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 560 -AFKAFKQMLSEEVVPDQVTFIGML 583
A ++ M++ + VP++VTF +L
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 223/530 (42%), Gaps = 64/530 (12%)
Query: 158 KLESACWNSVIAGYAKKGQFSDAEKVFNLM-----PVKDLVSYNSMLAGYTQNGKMGLAL 212
KL + V+ YA+ G S A ++++ + V D+++ NS+L+ ++ ++G A
Sbjct: 131 KLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDAR 190
Query: 213 HFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGF 264
+++M ++ + S ++V G N G + R+L E K PN V + T++ G+
Sbjct: 191 KVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGY 250
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIIN 324
+ G I A +F + K + L+ ++ T+IN
Sbjct: 251 CKLGDIENAYLVFKELKLK----------GFMPTLE-----------------TFGTMIN 283
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTG-----RVDEASKM---FNQLSTR 376
G+ + G + + +++ + + ++ +I +VD A +
Sbjct: 284 GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP 343
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIF 432
D +N +I C+ G+ + A+ + KK N++S+ +I Y ++ + D A +
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 433 QAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
M ER +IV++ LI G + + DA+ V + G PD + +
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT-AIEC---VDLISW 544
L +L + D +V LI + + G + A +VF+ ++E VD++
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
N++I G+ +G EA +M E +VPD+ T+ ++ + +F+ M E
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM-E 582
Query: 605 DFAIEPLAEHYSCLVD---LLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+P Y+ L++ G EE F ++ D+ N + +L+
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 215/505 (42%), Gaps = 73/505 (14%)
Query: 139 YTRKGKLEKARELLELVPDKLES-----ACWNSVIAGYAKKGQFSDAEKVFNLMPVK--- 190
Y G L KA E+ + V + +S AC NS+++ K + DA KV++ M +
Sbjct: 144 YAESGSLSKAVEIYDYVVELYDSVPDVIAC-NSLLSLLVKSRRLGDARKVYDEMCDRGDS 202
Query: 191 -DLVSYNSMLAGYTQNGKMGLALHFFE----KMAEKNVVSWNLMVSGFVNSGDLSSARQL 245
D S ++ G GK+ + E K N+V +N ++ G+ GD+ +A +
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 246 FEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK--NVVSW---NAMIAAYA 296
F+++ P ++ TM+ GF + G + RL + + V W N + A Y
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 297 QDLQID--EAVKLFIKLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
++D E++ I K D +++ +IN + GK + A ++ K +
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 354 MSGLIQ----TGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+ LIQ + D ASK+ Q++ R D + + +I G SG MD+A+++ ++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 406 KK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS----WNSLITGFLQNSLYF 457
+ ++ +N ++SG + G+ A+ +F M +RNI+ + +LI GF+++ +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
+A K L +G K D +H + G+ + AL
Sbjct: 503 EARKVFSLSVEKGVKVDV---------------------VHHNAMIKGFCRSGMLDEALA 541
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
M R+ V D +++++I GY A K F+ M + P+ V
Sbjct: 542 CM----NRMNEEHLV------PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 578 TFIGMLSACSHAGLANQGLDLFKCM 602
T+ +++ G + FK M
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEM 616
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 141/647 (21%), Positives = 286/647 (44%), Gaps = 58/647 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L + G +EA + S + + V+YN++I F K G A+ L D++S+
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 96 RNLVSWNTMIAGYLHNSMVEEASK-----LFDVMPERDNFSWALMITCYTRK----GKLE 146
NL++ +++ Y + +EEA + FD P+ FS + C K G L
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYRDMVMSGFD--PDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 147 KARELLELVPDKLESACWNSVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGY 202
+ E + + P+ + + +++ K + A +++ M V+ DLV Y ++ G
Sbjct: 283 REMEEMSVYPNHV---TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 203 TQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSAR----QLFEKIPNPNA 254
+ G + A F+ + E NVV++ +V G +GDLSSA Q+ EK PN
Sbjct: 340 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV 399
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVS--------WNAMIAAYAQDLQIDEAVK 306
V++ +M+ G+ + G + EA L M +NVV + + A +++ I+ + +
Sbjct: 400 VTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 459
Query: 307 LFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGR 362
+ + ++ ++N R+G++ E + + M K + + T+L+ + G
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Query: 363 VDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM--DEALDLFRQMPKKNSV-SWNTM 415
+ A ++ R D + +N +I+G + G++ D A R+ + + ++N M
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIM 579
Query: 416 ISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
++ + G + ++ M+ + +++S N ++ +N +A+ L M
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
P+ +T+ + HE +L G V N LIA K G + A
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 532 VFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
V +E D +++NSL+ GY + + +A + M+ + P+ T+ ++ S
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
AGL + +D + ++ + P Y+ L+ ++G ++ + +
Sbjct: 760 DAGLIKE-VDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/594 (21%), Positives = 266/594 (44%), Gaps = 68/594 (11%)
Query: 101 WNTMIA-----GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
WN++I G +H+ + SK+ D F+ ++I + + G+L A LL
Sbjct: 96 WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNR 155
Query: 156 PDKLESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLA 211
+++ +N+VI+G + G +A + + M + D VSYN+++ G+ + G A
Sbjct: 156 VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA 215
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA-RQLFEKIPNPNAVSWVTMLCGFARHGKI 270
++++E N+++ +++S + N + A R + +P+ V++ +++ + GK+
Sbjct: 216 KALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVG 330
E L M +V + + V+++T+++ +
Sbjct: 276 LEGGLLLREMEEMSV---------------------------YPNHVTYTTLVDSLFKAN 308
Query: 331 KLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWN 382
A +Y+QM + D+ T LM GL + G + EA K F L + + +
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+++ G C++G + A + QM +K N V++++MI+GY + G ++ A ++ + ME++
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 439 NIV----SWNSLITGFL---QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
N+V ++ ++I G + + + K + L+G E +
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE---ENNYILDALVNHLKRIGRI 485
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSL 547
+ L + ++ G D +LI ++ K G E+A ++ D++S+N L
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFA 607
ISG G + A A+K M + + PD TF M+++ G + L L+ M +
Sbjct: 546 ISGMLKFG-KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM-KSCG 603
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRG---MDVKANAGLWGSLLGACRVHK 658
I+P + +V +L G++EEA +++ M++ N + L HK
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 136/634 (21%), Positives = 273/634 (43%), Gaps = 98/634 (15%)
Query: 49 LGKVEEAVR-VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNT 103
L +EEA R + + ++VT++S+I+ K GK+ + L +M + N V++ T
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLEL----- 154
++ ++ A L+ M R D + +++ + G L +A + ++
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359
Query: 155 -VPDKLESACWNSVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMG 209
VP+ + + +++ G K G S AE + M + ++V+Y+SM+ GY + G +
Sbjct: 360 QVPNVV---TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 210 LALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTML 261
A+ KM ++NVV ++ ++ G +G A +L +++ N ++
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 262 CGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKLPHK--- 314
R G+I E + L M K V +++ ++I + + + A+ ++ +
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 315 -DGVSWSTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKM 369
D VS++ +I+G ++ GK+ A Y M K DIA +M+ + G + K+
Sbjct: 537 WDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 370 FNQLST----RDTICWNSMIAGFCQSGRMDEALDLFRQM------P-------------- 405
++++ + + N ++ C++G+M+EA+ + QM P
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 406 -------------------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVS 442
K + +NT+I+ + G A + ME R + V+
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
+NSL+ G+ S AL + +M G P+ +T+ + ++ +
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI----SWNSLISGYALNGYAI 558
G D F NALI+ AK G ++ + ++ + L+ ++N LIS +A G +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSA----CSH 588
+A + K+M V P+ T+ M+S C+H
Sbjct: 836 QARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 869
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 191/416 (45%), Gaps = 46/416 (11%)
Query: 315 DGVSWSTIINGYIRVGKL-DEAREVYNQM-PC---KDIAAETALMSGLIQTGRVDEA-SK 368
D W+++I+ + G + D+ +Y++M C D+ A L+ + GR+ A S
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL 151
Query: 369 MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQ 424
+ N++ + DT+ +N++I+G C+ G DEA +M K ++VS+NT+I G+ + G
Sbjct: 152 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
A+ + + E N+++ L++ + +A + +V+ G + PD TF
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFD---PDVVTFSSIINR 268
Query: 485 XXXXXXXQVGNQL----------HEYILKSGYINDLFVSNAL---IAMYAKCGRVESAEQ 531
G L ++ + ++ LF +N +A+Y ++
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY--------SQM 320
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
V I VDL+ + L+ G G EA K FK +L + VP+ VT+ ++ AG
Sbjct: 321 VVRGIP-VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWG 648
+ + M+E I P YS +++ + G LEEA +++R M+ V N +G
Sbjct: 380 LSSAEFIITQMLEKSVI-PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYG 438
Query: 649 SLL-GACRVHK-NLEIGEFAAMRLSELEPHNASNYI--TLSNMHAEAGRWEEVERL 700
+++ G + K + I MRL +E + NYI L N GR +EV+ L
Sbjct: 439 TVIDGLFKAGKEEMAIELSKEMRLIGVEEN---NYILDALVNHLKRIGRIKEVKGL 491
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 209/448 (46%), Gaps = 87/448 (19%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEAS 118
I NL TYN +I+ F + ++S A L KM + ++V+ N+++ G+ H + + +A
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLESACWNSVIAGYAKKGQFS 178
L D M E + PD + + ++I G + S
Sbjct: 169 ALVDQMVE-------------------------MGYKPD---TVTFTTLIHGLFLHNKAS 200
Query: 179 DAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMV 230
+A + + M + DLV+Y +++ G + G LAL+ KM E NVV ++ ++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
A LF ++ N PN +++ +++ +G+ ++A RL M + +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI- 319
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKLPHKDGVSWSTIINGYIRVGKLDEAREVYNQMPCK- 345
+ + V++S +I+ +++ GKL +A ++Y +M +
Sbjct: 320 --------------------------NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 346 ---DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEAL 398
+I ++L++G R+ EA +M + +D + +N++I GFC++ R+D+ +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 399 DLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGF 450
+LFR+M ++ N+V++ T+I G+ QA D+A+ +F+ M NI+++N L+ G
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTF 478
+N A+ + R +PD T+
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 215/483 (44%), Gaps = 78/483 (16%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAV 305
P P+ + + +L A+ K + M N+ ++N +I + + ++ A+
Sbjct: 74 PFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLAL 133
Query: 306 KL---FIKLPHK-DGVSWSTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMS 355
L +KL ++ D V+ ++++NG+ ++ +A + +QM P D T L+
Sbjct: 134 ALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP--DTVTFTTLIH 191
Query: 356 GLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KK 407
GL + EA + +++ R D + + +++ G C+ G D AL+L +M +
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSL 463
N V ++T+I + D A N+F ME + N+++++SLI+ + DA + L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M P+ TF +ALI + K
Sbjct: 312 SDMIERKINPNLVTF-----------------------------------SALIDAFVKK 336
Query: 524 GRVESAEQVFTAI--ECVD--LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
G++ AE+++ + +D + +++SLI+G+ + EA + + M+ ++ +P+ VT+
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM- 638
+++ A ++G++LF+ M + + Y+ L+ + + A V + M
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 639 --DVKANAGLWGSLL-GAC---RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
V N + LL G C ++ K + + E+ ++ S +EP + I + M +AG
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY--LQRSTMEPDIYTYNIMIEGM-CKAG 512
Query: 693 RWE 695
+W+
Sbjct: 513 KWK 515
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 117/226 (51%), Gaps = 23/226 (10%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+V + I L G+ +A R+ S+ I + NLVT++++I F K GK+ A +L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRK 142
++M +R N+ +++++I G+ + EA ++ ++M +D ++ +I + +
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 143 GKLEKARELLELVPDK---LESACWNSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSY 195
+++K EL + + + + ++I G+ + +A+ VF M ++++Y
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 196 NSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSG 237
N +L G +NGK+ A+ FE + E ++ ++N+M+ G +G
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 224/446 (50%), Gaps = 52/446 (11%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNG-KISDAR 87
G V+ + I G+ G EEA+ VF++ + NLVTYN++I K G +
Sbjct: 265 GNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA 324
Query: 88 QLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCY 139
+ FD+M Q + +++N+++A + E A LFD M E+D FS+ ++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 140 TRKGKLEKARELLELVPDKL---ESACWNSVIAGYAKKGQFSDAEKVFNLMP----VKDL 192
+ G+++ A E+L +P K +++VI G+AK G+F +A +F M D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
VSYN++L+ YT+ G+ AL +MA +K+VV++N ++ G+ G +++F +
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 249 IPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQ 300
+ PN +++ T++ G+++ G EA +F +VV ++A+I A ++
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 301 IDEAVKLFIKLPHKDGVS-----WSTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+ AV L ++ K+G+S +++II+ + R +D + + N + ++ +S
Sbjct: 565 VGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSATMDRSADYSN---GGSLPFSSSALS 620
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA--LDLFRQMP----KKNS 409
L +T + ++F QL+T N+ C+ G + + L++FR+M K N
Sbjct: 621 ALTET-EGNRVIQLFGQLTTES----NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNV 675
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAM 435
V+++ +++ ++ + A + + +
Sbjct: 676 VTFSAILNACSRCNSFEDASMLLEEL 701
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 194/396 (48%), Gaps = 63/396 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++MIS + GK++ A+++F+ T AG N++ +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFE-----------TAFAGGYGNTV----------------Y 269
Query: 131 SWALMITCYTRKGKLEKARELLELVPD---KLESACWNSVIAGYAKKG-QFSDAEKVFNL 186
+++ +I+ Y R G E+A + + + + +N+VI K G +F K F+
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 187 MP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGD 238
M D +++NS+LA ++ G A + F++M E++V S+N ++ G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 239 LSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNA 290
+ A ++ ++P PN VS+ T++ GFA+ G+ EA LF M + VS+N
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 291 MIAAYAQDLQIDEAVKLFIKLP----HKDGVSWSTIINGYIRVGKLDEAREVYNQMP--- 343
+++ Y + + +EA+ + ++ KD V+++ ++ GY + GK DE ++V+ +M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 344 -CKDIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEAL 398
++ + L+ G + G EA ++F + + D + ++++I C++G + A+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 399 DLFRQMPKK----NSVSWNTMISGYAQAGQMDSAEN 430
L +M K+ N V++N++I + ++ MD + +
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 222/471 (47%), Gaps = 69/471 (14%)
Query: 165 NSVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
+++I+ + G+ + A+++F + +++++++ Y ++G A+ F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 221 ----KNVVSWNLMVSGFVNSG-DLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
N+V++N ++ G + + F+++ P+ +++ ++L +R G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKLPHK----DGVSWSTII 323
AR LFD M + +V S+N ++ A + Q+D A ++ ++P K + VS+ST+I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST---- 375
+G+ + G+ DEA ++ +M IA + L+S + GR +EA + ++++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
+D + +N+++ G+ + G+ DE +F +M ++ N ++++T+I GY++ G A I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 432 FQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ + ++V +++LI +N L A+ + M +EG P+ T+
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 488 XXXXQVGNQLHEYILKSGYIND---LFVSNALIAMYAK--------CGRVESAEQVFTAI 536
+ Y N F S+AL A+ G++ + T
Sbjct: 597 SATMD---------RSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTK 647
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
+C + + S I +E F+ Q+ E+ P+ VTF +L+ACS
Sbjct: 648 DCEEGMQELSCI---------LEVFRKMHQL---EIKPNVVTFSAILNACS 686
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 210/466 (45%), Gaps = 55/466 (11%)
Query: 260 MLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKLP--- 312
M+ R+GK+T A+R+F++ V +++A+I+AY + +EA+ +F +
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 313 -HKDGVSWSTIINGYIRVG-KLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEA 366
+ V+++ +I+ + G + + + +++M + + + L+ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 367 SKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISG 418
+F++++ R D +N+++ C+ G+MD A ++ QMP K N VS++T+I G
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 419 YAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+A+AG+ D A N+F M I VS+N+L++ + + +AL L M G K D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
T+ ++ + + + +L + LI Y+K G + A ++F
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 535 AIECV----DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+ D++ +++LI NG A +M E + P+ VT+ ++ A +
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 591 LANQGLDLFKCMVEDF---AIEPLAE-HYSCLVDLLGRM--------------GRLE--- 629
++ D F A+ L E + ++ L G++ G E
Sbjct: 599 TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC 658
Query: 630 --EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL 673
E F + +++K N + ++L AC + E A+M L EL
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED---ASMLLEEL 701