Miyakogusa Predicted Gene

Lj0g3v0094929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0094929.1 Non Chatacterized Hit- tr|F0ZLB7|F0ZLB7_DICPU
Putative uncharacterized protein (Fragment)
OS=Dictyos,33.89,1e-18,PHOSPHATIDYLINOSITOL GLYCAN, CLASS
C,Phosphatidylinositol N-acetylglucosaminyltransferase;
seg,NULL;,CUFF.5272.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34980.1 | Symbols: SETH1 | phosphatidylinositolglycan syntha...   232   1e-61

>AT2G34980.1 | Symbols: SETH1 | phosphatidylinositolglycan synthase
           family protein | chr2:14748967-14749878 FORWARD
           LENGTH=303
          Length = 303

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/196 (68%), Positives = 151/196 (77%), Gaps = 3/196 (1%)

Query: 1   MDHRLAGGNSSPPRPRWRKVAYGGMQPGYDDNYTDESFLEGMVMNASVVKRDMVKVMLDS 60
           M+  LAG   S P P+WRKVAYGGMQ GYDDNYTDESFLE MVMNA+VV+RD++KVM DS
Sbjct: 1   MESNLAG--DSIPGPKWRKVAYGGMQIGYDDNYTDESFLEEMVMNANVVRRDLLKVMKDS 58

Query: 61  VSISEYLCIVALVVLVWARTLTSTLDENXXXXXXXXXXXXGFLILLFTQE-MLSLGLLLH 119
           VSIS+YLCIVALVVLVW  TL S+LDEN            GFLILL T+E MLSL LLL 
Sbjct: 59  VSISQYLCIVALVVLVWVHTLESSLDENSLLLLDLSLLASGFLILLLTEEKMLSLSLLLR 118

Query: 120 YILNISFFITGLYVLAPIYQTLTRSISSDSIWAVTXXXXXXXXXXHDYSESTVKAPGVKK 179
           Y++NISFF TGLY+LAPIYQTLTRSISSDSIWAVT          HDYS ST++APG  K
Sbjct: 119 YLVNISFFTTGLYILAPIYQTLTRSISSDSIWAVTVSLLLLHLFLHDYSGSTIRAPGALK 178

Query: 180 NPALTNCISVNASVVA 195
            P LT+CISVNAS+VA
Sbjct: 179 TPNLTSCISVNASIVA 194