Miyakogusa Predicted Gene
- Lj0g3v0091199.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0091199.2 tr|Q852R1|Q852R1_LOTJA Serine
palmitoyltransferase OS=Lotus japonicus GN=LjLCB2 PE=2
SV=1,99.15,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; no description,P,CUFF.5727.2
(237 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23670.2 | Symbols: LCB2 | long chain base2 | chr5:7981889-79... 422 e-118
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981889-79... 422 e-118
AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferas... 412 e-116
AT3G48790.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent tr... 147 8e-36
AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain... 62 3e-10
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain... 62 3e-10
>AT5G23670.2 | Symbols: LCB2 | long chain base2 |
chr5:7981889-7985037 FORWARD LENGTH=489
Length = 489
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/237 (83%), Positives = 213/237 (89%)
Query: 1 MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
MI IPYLTA++TYFSYGLLFAFGQ RDFFR+ DW ++NLQGYAPICLG EDFYIRRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
RIQDCF RPI+SAPDAWFDVVERYSNDNNKTLKRT K SRCLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
TPRVI+SLKK+S STCS+RVD GTT +H ELEECV FV KPAA+VFGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180
Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHR 237
L+GKG LIISDSLNH+SIVNGARGSGATIRVFQHN PSHLE VLREQIAEGQPRTHR
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHR 237
>AT5G23670.1 | Symbols: LCB2 | long chain base2 |
chr5:7981889-7985037 FORWARD LENGTH=489
Length = 489
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/237 (83%), Positives = 213/237 (89%)
Query: 1 MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
MI IPYLTA++TYFSYGLLFAFGQ RDFFR+ DW ++NLQGYAPICLG EDFYIRRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
RIQDCF RPI+SAPDAWFDVVERYSNDNNKTLKRT K SRCLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
TPRVI+SLKK+S STCS+RVD GTT +H ELEECV FV KPAA+VFGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180
Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHR 237
L+GKG LIISDSLNH+SIVNGARGSGATIRVFQHN PSHLE VLREQIAEGQPRTHR
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHR 237
>AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferase 1
| chr3:18089346-18092276 FORWARD LENGTH=489
Length = 489
Score = 412 bits (1059), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/237 (80%), Positives = 211/237 (89%)
Query: 1 MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
MI IPYLTA++TYFSYGLLFAFGQ RD+ R IFDW +NNLQGYAPICL EDFYIRRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFDWWRTNNLQGYAPICLAHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
RIQDCFGRPI+SAPDAW DVVER S+DNNKTLKRT K SRCLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
TPRVI+SLKK+S STCS+RVD GTT +H ELE+CVA +V +PAA++FGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEDCVAKYVGQPAAVIFGMGYATNSAIIPV 180
Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHR 237
L+GKG LIISDSLNH SIVNGARGSGATIRVFQHN P HLE+VL+EQIAEGQPRTHR
Sbjct: 181 LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPGHLEKVLKEQIAEGQPRTHR 237
>AT3G48790.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein |
chr3:18093404-18095181 FORWARD LENGTH=350
Length = 350
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 79/95 (83%), Gaps = 7/95 (7%)
Query: 143 GTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGA 202
GTT +H ELEECVA FV KPAA+VFGMGY+TNSAI+ VL+GKG LIISDSLNH SI+NGA
Sbjct: 7 GTTAVHGELEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIISDSLNHTSIINGA 66
Query: 203 RGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHR 237
RGSGATIRVFQHN +L+E I EGQPRTHR
Sbjct: 67 RGSGATIRVFQHN-------ILKEHIIEGQPRTHR 94
>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
base1 | chr4:17218598-17221124 FORWARD LENGTH=482
Length = 482
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 102 CLNLGSYNYLGFAASD---EYCTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASF 158
+N S NYLG + E CT +L+KY +C R GT D+H + E ++ F
Sbjct: 111 VVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCETRISKF 166
Query: 159 VRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215
+ P ++++ G T + +P KG +I++D H I NG + S +TI F+HN
Sbjct: 167 LGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYFKHN 223
>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
base1 | chr4:17218598-17221124 FORWARD LENGTH=482
Length = 482
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 102 CLNLGSYNYLGFAASD---EYCTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASF 158
+N S NYLG + E CT +L+KY +C R GT D+H + E ++ F
Sbjct: 111 VVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCETRISKF 166
Query: 159 VRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215
+ P ++++ G T + +P KG +I++D H I NG + S +TI F+HN
Sbjct: 167 LGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYFKHN 223