Miyakogusa Predicted Gene
- Lj0g3v0088659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0088659.1 Non Chatacterized Hit- tr|D8U117|D8U117_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,43.69,6e-17,T-COMPLEX 11-RELATED,NULL; TESTIS-SPECIFIC PROTEIN
PBS13 (T-COMPLEX 11 ),T-complex 11;
Tcp11,T-compl,NODE_14568_length_2376_cov_188.041245.path3.1
(554 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22930.1 | Symbols: | T-complex protein 11 | chr1:8117521-81... 530 e-150
AT1G22930.2 | Symbols: | T-complex protein 11 | chr1:8118049-81... 528 e-150
AT4G09150.1 | Symbols: | T-complex protein 11 | chr4:5828753-58... 244 1e-64
AT4G09150.2 | Symbols: | T-complex protein 11 | chr4:5828753-58... 244 1e-64
>AT1G22930.1 | Symbols: | T-complex protein 11 |
chr1:8117521-8121854 FORWARD LENGTH=1131
Length = 1131
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 284/561 (50%), Positives = 381/561 (67%), Gaps = 32/561 (5%)
Query: 2 LGLNEKSVKSMPFDQLALLIESASTLQTVKTLLDRLENRLKLSTTVAPRNHMSSLHNIDH 61
L +NE S+PF+QLA+L+ES +TL+TVK+LLDRLE RL+ S V + S L NIDH
Sbjct: 312 LKINE----SLPFEQLAMLLESLNTLKTVKSLLDRLEIRLEASKNVTTVSQPSILDNIDH 367
Query: 62 LLKRAATPNKKATPRSSLRSRGVRKIDSVKRSNNSLAGLSRYPVRIVLCAYMILGHPDAV 121
LLKR ATP +KATP S+LRSR +K+ SV+ + +SRYPVR+VL A+MILGHPDAV
Sbjct: 368 LLKRVATPRRKATP-STLRSRKGKKVSSVRNVAGTSVKMSRYPVRVVLSAFMILGHPDAV 426
Query: 122 FSGTGEREISLAKSAKEFVQMFELLIKVILEGPIQSSDEESLSTVMRRCTFRSQLSAFDK 181
F+G G++E +L +AK FV+ +LLI VI EGP+Q S ES + T RSQL FDK
Sbjct: 427 FNGQGDQEAALNNAAKGFVRELKLLINVIQEGPVQVSGGES-----KHRTLRSQLDLFDK 481
Query: 182 AWCSYLNCFVVWKVKDAQSLEEDLVRAACQLEASMIQTCKLTPEGVGSQLSHDMKAILHQ 241
AWCS+LN FV+WKVKDA+ LE+DLVRAACQLE SMIQ CKLTPEGV + L+HD KAI Q
Sbjct: 482 AWCSFLNSFVIWKVKDARLLEDDLVRAACQLELSMIQKCKLTPEGVDTMLTHDKKAIQMQ 541
Query: 242 VTEDQKLLREKVLHLSGNAGIERMECALSETRSRYLSVQDNDSPM-----RFTTQSVSPT 296
VT+DQ+LL EKV HLSG AG+ERME AL ETR++Y +++ SPM F + S + +
Sbjct: 542 VTQDQELLTEKVRHLSGVAGVERMESALLETRTKYFQAKEDGSPMANQLAHFFSPSPASS 601
Query: 297 PISNVAXXXXXXXXXXXXHKTSRVVRSLFKETNTSPIEXXXXXXXXXXXXQLGSSSEKLA 356
P+ +V+ ++RV RSL K+ +T P + ++++
Sbjct: 602 PVQSVSSSSSRSKDSIGVEGSNRVNRSLLKD-DTPPSSGPSRVS--------NGTVDEVS 652
Query: 357 AENEFLVNEFVHEHHRSFADGLDVSDHIQNSIEGNI---IKQTMEKAFWDGIMESVEQDQ 413
+NE +VNEF+H+ + +F G V D E N+ IK+TME+AFWD +MES++ ++
Sbjct: 653 NQNELMVNEFLHDGNLNFPGGSTVKDE-----EDNLKRRIKETMERAFWDNVMESMKLEK 707
Query: 414 PNYDQIIQLMGEVRDEICEMAPKSWKEDIVAAIDLEILSQVLRSGNLDVDCLGKILRFSL 473
P+Y I LM EV DE+C+M P SWK +I IDL+ILSQ+L SG LD+D LGK+L F+L
Sbjct: 708 PDYSCISNLMKEVSDELCQMVPDSWKVEITETIDLDILSQLLNSGTLDIDYLGKMLEFAL 767
Query: 474 GCLQKLSSPANEEIMKATHETLFSELSEICQSRDESNKSCVVALVKGLKFVLEQIQILKK 533
L+KLS+PAN+ ++TH L EL +C++ DES VA+VKG++F+LEQIQ LK+
Sbjct: 768 ATLRKLSAPANDRENESTHRDLLKELHRLCEAEDESGNFRAVAIVKGIRFILEQIQELKR 827
Query: 534 EISKARIRLMEPLIKGPAGLD 554
EI RI +M+P ++GPAG D
Sbjct: 828 EIGIGRIAIMKPFLQGPAGFD 848
>AT1G22930.2 | Symbols: | T-complex protein 11 |
chr1:8118049-8121854 FORWARD LENGTH=1020
Length = 1020
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 284/561 (50%), Positives = 381/561 (67%), Gaps = 32/561 (5%)
Query: 2 LGLNEKSVKSMPFDQLALLIESASTLQTVKTLLDRLENRLKLSTTVAPRNHMSSLHNIDH 61
L +NE S+PF+QLA+L+ES +TL+TVK+LLDRLE RL+ S V + S L NIDH
Sbjct: 201 LKINE----SLPFEQLAMLLESLNTLKTVKSLLDRLEIRLEASKNVTTVSQPSILDNIDH 256
Query: 62 LLKRAATPNKKATPRSSLRSRGVRKIDSVKRSNNSLAGLSRYPVRIVLCAYMILGHPDAV 121
LLKR ATP +KATP S+LRSR +K+ SV+ + +SRYPVR+VL A+MILGHPDAV
Sbjct: 257 LLKRVATPRRKATP-STLRSRKGKKVSSVRNVAGTSVKMSRYPVRVVLSAFMILGHPDAV 315
Query: 122 FSGTGEREISLAKSAKEFVQMFELLIKVILEGPIQSSDEESLSTVMRRCTFRSQLSAFDK 181
F+G G++E +L +AK FV+ +LLI VI EGP+Q S ES + T RSQL FDK
Sbjct: 316 FNGQGDQEAALNNAAKGFVRELKLLINVIQEGPVQVSGGES-----KHRTLRSQLDLFDK 370
Query: 182 AWCSYLNCFVVWKVKDAQSLEEDLVRAACQLEASMIQTCKLTPEGVGSQLSHDMKAILHQ 241
AWCS+LN FV+WKVKDA+ LE+DLVRAACQLE SMIQ CKLTPEGV + L+HD KAI Q
Sbjct: 371 AWCSFLNSFVIWKVKDARLLEDDLVRAACQLELSMIQKCKLTPEGVDTMLTHDKKAIQMQ 430
Query: 242 VTEDQKLLREKVLHLSGNAGIERMECALSETRSRYLSVQDNDSPM-----RFTTQSVSPT 296
VT+DQ+LL EKV HLSG AG+ERME AL ETR++Y +++ SPM F + S + +
Sbjct: 431 VTQDQELLTEKVRHLSGVAGVERMESALLETRTKYFQAKEDGSPMANQLAHFFSPSPASS 490
Query: 297 PISNVAXXXXXXXXXXXXHKTSRVVRSLFKETNTSPIEXXXXXXXXXXXXQLGSSSEKLA 356
P+ +V+ ++RV RSL K+ +T P + ++++
Sbjct: 491 PVQSVSSSSSRSKDSIGVEGSNRVNRSLLKD-DTPPSSGPSRVS--------NGTVDEVS 541
Query: 357 AENEFLVNEFVHEHHRSFADGLDVSDHIQNSIEGNI---IKQTMEKAFWDGIMESVEQDQ 413
+NE +VNEF+H+ + +F G V D E N+ IK+TME+AFWD +MES++ ++
Sbjct: 542 NQNELMVNEFLHDGNLNFPGGSTVKDE-----EDNLKRRIKETMERAFWDNVMESMKLEK 596
Query: 414 PNYDQIIQLMGEVRDEICEMAPKSWKEDIVAAIDLEILSQVLRSGNLDVDCLGKILRFSL 473
P+Y I LM EV DE+C+M P SWK +I IDL+ILSQ+L SG LD+D LGK+L F+L
Sbjct: 597 PDYSCISNLMKEVSDELCQMVPDSWKVEITETIDLDILSQLLNSGTLDIDYLGKMLEFAL 656
Query: 474 GCLQKLSSPANEEIMKATHETLFSELSEICQSRDESNKSCVVALVKGLKFVLEQIQILKK 533
L+KLS+PAN+ ++TH L EL +C++ DES VA+VKG++F+LEQIQ LK+
Sbjct: 657 ATLRKLSAPANDRENESTHRDLLKELHRLCEAEDESGNFRAVAIVKGIRFILEQIQELKR 716
Query: 534 EISKARIRLMEPLIKGPAGLD 554
EI RI +M+P ++GPAG D
Sbjct: 717 EIGIGRIAIMKPFLQGPAGFD 737
>AT4G09150.1 | Symbols: | T-complex protein 11 |
chr4:5828753-5833475 FORWARD LENGTH=1097
Length = 1097
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 157/200 (78%), Gaps = 1/200 (0%)
Query: 355 LAAENEFLVNEFVHEHHRSFADGLDVSDHIQNSIEGNIIKQTMEKAFWDGIMESVEQDQP 414
LA+ENE +VNE VH++ SFAD LD + ++++ + K+TMEKAFWDG+MES++Q QP
Sbjct: 602 LASENEVIVNEIVHDNSSSFADSLDPNTGDTSNLQVRV-KETMEKAFWDGVMESMKQSQP 660
Query: 415 NYDQIIQLMGEVRDEICEMAPKSWKEDIVAAIDLEILSQVLRSGNLDVDCLGKILRFSLG 474
++ +I+LM EVRDE+CE++PK W+++IV ID ++LSQ+L SGN+D+ LG IL FSLG
Sbjct: 661 DFSWVIKLMKEVRDELCEISPKDWRQEIVQTIDTDVLSQLLASGNVDMGYLGNILEFSLG 720
Query: 475 CLQKLSSPANEEIMKATHETLFSELSEICQSRDESNKSCVVALVKGLKFVLEQIQILKKE 534
L KLS+PANEE ++ TH L +EL EI + SN S V +VKGL+FVL+QIQILKKE
Sbjct: 721 ILLKLSAPANEEEIRVTHHKLMTELGEIVPTDGHSNSSYAVLMVKGLRFVLQQIQILKKE 780
Query: 535 ISKARIRLMEPLIKGPAGLD 554
ISK+R++L+EPL+KGPAGL+
Sbjct: 781 ISKSRLKLLEPLLKGPAGLE 800
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 138/207 (66%), Gaps = 10/207 (4%)
Query: 2 LGLNEKSVKSMPFDQLALLIESASTLQTVKTLLDRLENRLKLSTTVAPRNHMSSLHNIDH 61
LG+NEKS++S+PF+Q A+ + S S +QTVK LLDRLE RL LS S++ NI+H
Sbjct: 311 LGINEKSIESVPFEQFAIQMNSVSVIQTVKALLDRLEIRLTLSKA-------SNVENINH 363
Query: 62 LLKRAATPNKKATPRSSLRSRGVRKIDSVKRSNNSLAGLSRYPVRIVLCAYMILGHPDAV 121
LLK P ++ S + S+G + + K L ++RYP RI LCAYMI HP A+
Sbjct: 364 LLKHIFPPVRRGKSPSPM-SKGEQNSPNSKMGYQKLKKIARYPARIFLCAYMIKQHPGAI 422
Query: 122 FSGTGEREISLAKSAKEFVQMFELLIKVILEGPIQSSDEESLSTVMRRCT-FRSQLSAFD 180
F G GE EI+L +SA ++ FELL+KVILEGP +S+ ++S V +R FRSQL AFD
Sbjct: 423 FRGRGEHEIALVESATCLIREFELLVKVILEGP-ESTLPGNVSFVAQRPKKFRSQLEAFD 481
Query: 181 KAWCSYLNCFVVWKVKDAQSLEEDLVR 207
KAWCSYL FVVWK+ DA+ LE+DL R
Sbjct: 482 KAWCSYLEGFVVWKINDAKLLEKDLAR 508
>AT4G09150.2 | Symbols: | T-complex protein 11 |
chr4:5828753-5833475 FORWARD LENGTH=1098
Length = 1098
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 157/200 (78%), Gaps = 1/200 (0%)
Query: 355 LAAENEFLVNEFVHEHHRSFADGLDVSDHIQNSIEGNIIKQTMEKAFWDGIMESVEQDQP 414
LA+ENE +VNE VH++ SFAD LD + ++++ + K+TMEKAFWDG+MES++Q QP
Sbjct: 603 LASENEVIVNEIVHDNSSSFADSLDPNTGDTSNLQVRV-KETMEKAFWDGVMESMKQSQP 661
Query: 415 NYDQIIQLMGEVRDEICEMAPKSWKEDIVAAIDLEILSQVLRSGNLDVDCLGKILRFSLG 474
++ +I+LM EVRDE+CE++PK W+++IV ID ++LSQ+L SGN+D+ LG IL FSLG
Sbjct: 662 DFSWVIKLMKEVRDELCEISPKDWRQEIVQTIDTDVLSQLLASGNVDMGYLGNILEFSLG 721
Query: 475 CLQKLSSPANEEIMKATHETLFSELSEICQSRDESNKSCVVALVKGLKFVLEQIQILKKE 534
L KLS+PANEE ++ TH L +EL EI + SN S V +VKGL+FVL+QIQILKKE
Sbjct: 722 ILLKLSAPANEEEIRVTHHKLMTELGEIVPTDGHSNSSYAVLMVKGLRFVLQQIQILKKE 781
Query: 535 ISKARIRLMEPLIKGPAGLD 554
ISK+R++L+EPL+KGPAGL+
Sbjct: 782 ISKSRLKLLEPLLKGPAGLE 801
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 138/207 (66%), Gaps = 10/207 (4%)
Query: 2 LGLNEKSVKSMPFDQLALLIESASTLQTVKTLLDRLENRLKLSTTVAPRNHMSSLHNIDH 61
LG+NEKS++S+PF+Q A+ + S S +QTVK LLDRLE RL LS S++ NI+H
Sbjct: 311 LGINEKSIESVPFEQFAIQMNSVSVIQTVKALLDRLEIRLTLSKA-------SNVENINH 363
Query: 62 LLKRAATPNKKATPRSSLRSRGVRKIDSVKRSNNSLAGLSRYPVRIVLCAYMILGHPDAV 121
LLK P ++ S + S+G + + K L ++RYP RI LCAYMI HP A+
Sbjct: 364 LLKHIFPPVRRGKSPSPM-SKGEQNSPNSKMGYQKLKKIARYPARIFLCAYMIKQHPGAI 422
Query: 122 FSGTGEREISLAKSAKEFVQMFELLIKVILEGPIQSSDEESLSTVMRRCT-FRSQLSAFD 180
F G GE EI+L +SA ++ FELL+KVILEGP +S+ ++S V +R FRSQL AFD
Sbjct: 423 FRGRGEHEIALVESATCLIREFELLVKVILEGP-ESTLPGNVSFVAQRPKKFRSQLEAFD 481
Query: 181 KAWCSYLNCFVVWKVKDAQSLEEDLVR 207
KAWCSYL FVVWK+ DA+ LE+DL R
Sbjct: 482 KAWCSYLEGFVVWKINDAKLLEKDLAR 508