Miyakogusa Predicted Gene
- Lj0g3v0072269.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0072269.2 Non Chatacterized Hit- tr|K3Z829|K3Z829_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022021,63.51,1e-17,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; OS02G0126500 PROTEIN,NULL; FAMILY NOT
,CUFF.3568.2
(146 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-51
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 64 3e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 64 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 63 8e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 63 9e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-10
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 60 5e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 8e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 8e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 1e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 3e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 57 3e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 57 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 57 4e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 57 5e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 7e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 56 9e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 55 1e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 2e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 55 2e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 5e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 5e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 53 6e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-08
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 53 9e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 52 1e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 3e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 50 4e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-07
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 6e-07
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 9e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 48 2e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 3e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 3e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 3e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 4e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 47 5e-06
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 5e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 5e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 47 5e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 6e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 47 6e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 6e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 7e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 46 7e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 8e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 195 bits (496), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 111/140 (79%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M LDGV+P D FHS VVGTM+G+R+ DAF+F +MK MG+ PDV LYNFLISTCGK KN
Sbjct: 67 MKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKCKN 126
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+AI++ +EMK +VKPN +T++CLL+ACA G+LD V AIVRDMTAAG+GLN+FCYAG
Sbjct: 127 GKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAG 186
Query: 121 LIVAHKNKTPVTDDFAAKVV 140
LI AH NK P D+ + K++
Sbjct: 187 LITAHLNKQPRPDNLSTKIL 206
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG+ P+ T+++L+ RGS Q+A +MK G D YN L+ GKS
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A+++L EM P++ TY L+ A A DG LD + M G + F Y
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 121 LI 122
L+
Sbjct: 390 LL 391
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G ++ T+++L+ + R ++A LN+M + G P + YN LIS +
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A+++ +M KP+V TY LL G+++ +I +M AG N +
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 121 LIVAHKNKTPVTD 133
I + N+ T+
Sbjct: 425 FIKMYGNRGKFTE 437
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P R+TF++L+ R + A +M G+ PD++ YN +++ + +Q+
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
++L EM+ KPN TY LLHA A + ++++ ++
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+L+G P+ T++SL+ R + +A NQM G PDV Y L+S ++
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+ I EEM+ KPN+ T+ + G+ + I ++ GL + +
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 121 LIV 123
L+
Sbjct: 460 LLA 462
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ G+KP+ ++++++ R +RM+DA ++M+ G+VPDV YN I +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
++AI ++ M +PN TY ++ R D V D+
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G KP+ T+ +L+ G R +++ A +M+ G P++ +N I G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ ++I +E+ + P++ T+ LL +G V+ + ++M AG + +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 121 LIVAH 125
LI A+
Sbjct: 495 LISAY 499
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 1 MMLDGVKPNRDTFHSL--VVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 58
M DG KP T++ + V G M G+ + +MK G+ PD YN LI+ C +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKM-GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 59 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+A Q+ EEMK + TY LL R ++ +M G + Y
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 119 AGLIVAH 125
LI A+
Sbjct: 353 NSLISAY 359
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T+++L+ + + +MK G VP+ +N LIS + + +QA
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ + M V P++ TY +L A A G ++ ++ +M N+ Y L+ A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 125 HKN 127
+ N
Sbjct: 569 YAN 571
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P+ T++SL+ R + + L ++ G+ PD+ YN +I ++ A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+I EM+ + P+V TY + + AAD + +VR M G N+ Y ++
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 5 GVKPNRDTFHSLVVGTMRGSR--MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
G KPN TF++ + M G+R + +++ + GL PD+ +N L++ G++
Sbjct: 414 GCKPNICTFNAFI--KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +EMK P T+ L+ A + G ++ + R M AG+ + Y ++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 123 VA 124
A
Sbjct: 532 AA 533
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P+ TF SL+ G RG R+ DA Y +QM MG P+V +YN +I KSK D A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ +L M+ + P+V TY L+ + GR +V MT + + F + LI A
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 125 HKNKTPVTD 133
+ V++
Sbjct: 266 CVKEGRVSE 274
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G KPN +++++ G + ++ +A LN+M+ G+ PDV YN LIS S A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+++ M E+ P+V T+ L+ AC +GR+ +M L + Y+ LI
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG+ P+ T++SL+ G R DA ++ M + PDV +N LI C K
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A + EEM + P++ TY L++ RLD + M + G + Y+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 121 LI 122
LI
Sbjct: 332 LI 333
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T+ L+ G + +++ +M G+V + Y LI ++
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A +I M F V PN+ TY LLH +G++++ I+ DM G+ + Y
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 121 LIVAHKNKTPVTDDF 135
+I V D +
Sbjct: 437 IIRGMCKAGEVADAW 451
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + P+ T+ L+ G SR+ +A M G PDV Y+ LI+ KSK
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +++ EM V N TY L+ G+L+ I R M G+ N Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 121 LI 122
L+
Sbjct: 402 LL 403
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 69/124 (55%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ TF SL+ G G+RM++A +NQM MG+ PDV +Y +I + K+ +
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+ + ++M+ ++P+V Y L++ GR ++++R MT + + +
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 121 LIVA 124
LI A
Sbjct: 253 LIDA 256
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++P+ + SLV G R +DA L M + PDV +N LI K A
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ EM M + PN+ TY L++ +G +D + M G + Y LI
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP+ + +++ + + A +QM+ G+ PDV +Y L++ S A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+L M ++KP+V T+ L+ A +G+ + +M + N F Y LI
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G P+ + SL+ G + ++ DA +M GL + Y LI G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
+ A ++ M V PN+RTY LLH +G++ + I DM
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ N T+ +L+ G + + A + M G+ P++ YN L+ +
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 61 SDQAIQILEEMKFME---VKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
+A+ I E+M+ E V PN+ TY LLH +G+L++ + DM
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ T+ L+ G +++++A F + K G++PDV Y+ +I C K++
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+++ + +EM V+PN Y L+ A GRL + DM G+ N Y
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LI 122
LI
Sbjct: 686 LI 687
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ PN T+ SL+ G SR+++A +M++ GL P+V Y LI GK
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +L EM V PN TY ++ A DG + + ++ +M G+ + Y
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LIVAHKNKTPVTDDF 135
I + + V + F
Sbjct: 791 FIYGYLKQGGVLEAF 805
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G+ P+ T+ ++ G + R ++ F ++M + P+ +YN LI +S
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A+++ E+MK + PN TY L+ + R++ + +M GL N F Y LI
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G++P T+ LV G R R+ DA++ L +M G P+V +YN LI + ++ +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++AI+I + M + TY L+ +G+ D ++++M + G +N+ +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 LI 122
+I
Sbjct: 441 VI 442
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM V+PN ++ L+ R R+ A MK G+ P+ Y LI
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A + EEM+ ++PNV Y L+ G++ +V ++R+M + + NK Y
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 LIVAHKNKTPVTD 133
+I + VT+
Sbjct: 756 MIGGYARDGNVTE 768
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV PN TF++++ G R +AF F +M G+ P + Y+ L+ ++K A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+L+EM PNV Y L+ + G L++ I M + GL L Y LI
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 125 H 125
+
Sbjct: 410 Y 410
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV P+ F + + +G ++++A ++M+ G+ P+V +N +I G D+A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
E+M ++P + TY L+ R+ ++++MT G N Y LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ T+ L+ G +++++A F + K G++PDV Y+ +I C K++
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+++ + +EM V+PN Y L+ A GRL + DM G+ N Y
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LI 122
LI
Sbjct: 686 LI 687
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ PN T+ SL+ G SR+++A +M++ GL P+V Y LI GK
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +L EM V PN TY ++ A DG + + ++ +M G+ + Y
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LIVAHKNKTPVTDDF 135
I + + V + F
Sbjct: 791 FIYGYLKQGGVLEAF 805
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G+ P+ T+ ++ G + R ++ F ++M + P+ +YN LI +S
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A+++ E+MK + PN TY L+ + R++ + +M GL N F Y LI
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G++P T+ LV G R R+ DA++ L +M G P+V +YN LI + ++ +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++AI+I + M + TY L+ +G+ D ++++M + G +N+ +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 LI 122
+I
Sbjct: 441 VI 442
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM V+PN ++ L+ R R+ A MK G+ P+ Y LI
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A + EEM+ ++PNV Y L+ G++ +V ++R+M + + NK Y
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 LIVAHKNKTPVTD 133
+I + VT+
Sbjct: 756 MIGGYARDGNVTE 768
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV PN TF++++ G R +AF F +M G+ P + Y+ L+ ++K A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+L+EM PNV Y L+ + G L++ I M + GL L Y LI
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 125 H 125
+
Sbjct: 410 Y 410
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV P+ F + + +G ++++A ++M+ G+ P+V +N +I G D+A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
E+M ++P + TY L+ R+ ++++MT G N Y LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G++P+ TF L+ G + M+DAF N M G P+V Y LI K +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A ++L EM + ++PN+ TY +++ G ++ +V + AAGL + Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 LIVAH 125
L+ A+
Sbjct: 532 LMDAY 536
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G PN T+ +L+ G + + A L++M +GL P++ YN +++ KS N
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG-------- 112
++A++++ E + + + TY L+ A G +D+ I+++M GL
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 113 -LNKFCYAGLI 122
+N FC G++
Sbjct: 567 LMNGFCLHGML 577
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++PN T++S+V G + +++A + + + GL D Y L+ KS D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+IL+EM ++P + T+ L++ G L+ ++ M A G+ N + L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ P+ T+ +++ G + M +A ++M GL PD + LI+ K+ + A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ M PNV TY L+ +G LD N ++ +M GL N F Y ++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G++P+ TF L+ G + M+DAF N M G P+V Y LI K +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A ++L EM + ++PN+ TY +++ G ++ +V + AAGL + Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 LIVAH 125
L+ A+
Sbjct: 532 LMDAY 536
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G PN T+ +L+ G + + A L++M +GL P++ YN +++ KS N
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG-------- 112
++A++++ E + + + TY L+ A G +D+ I+++M GL
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 113 -LNKFCYAGLI 122
+N FC G++
Sbjct: 567 LMNGFCLHGML 577
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++PN T++S+V G + +++A + + + GL D Y L+ KS D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+IL+EM ++P + T+ L++ G L+ ++ M A G+ N + L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ P+ T+ +++ G + M +A ++M GL PD + LI+ K+ + A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ M PNV TY L+ +G LD N ++ +M GL N F Y ++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ GVKPN T ++L+ G ++G R+ DA++ N+M+ + PD T YN L+ +
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A Q+ +EM +P++ TY L+ GRL + +++ + A G+ ++ +
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF-- 548
Query: 121 LIVAHK 126
LI+A K
Sbjct: 549 LILAKK 554
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 66/127 (51%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N ++ L+ G R + +A + QMK G+ PD+ Y IS C K+ + ++A Q +
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 128
EEM+ + VKPN++TY L+ A ++ + +M A G+ +K Y L+ + ++
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
Query: 129 TPVTDDF 135
+ + +
Sbjct: 848 ASIAEAY 854
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +GVK N T+ ++ G ++ +AF M G+ PDV LYN +IS N
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+AIQ ++EM+ + +P RT++ ++H A G + R + M G + G
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 121 LI 122
LI
Sbjct: 630 LI 631
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T+ +L+ + RMQ A +M + + +YN LI + + +A ++++M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
K VKP++ TY + AC+ G ++R + +M A G+ N Y LI
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 35/151 (23%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
+P TF ++ G + M+ + + M+ G VP V +N LI+ + + ++A++
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 67 ILEEMKFMEVKPNVRTYI-----------------------------------CLLHACA 91
IL+EM V N TY LL AC
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 92 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
GR+ A+ ++M+A + N F Y LI
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM DG++P + T+ SL+ R ++ ++A ++ G+ PD+ + N L+ N
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A +L+EM M + P+ TY CL+ +G+ + ++ +M G+ + Y
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 121 LIVAHKNK 128
LI + K
Sbjct: 543 LISGYSKK 550
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 5 GVKPNRDTFHSLVVG-TMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSD 62
G+KP T+++LV G ++RG R++ A +++MK G PD+ YN ++S C N
Sbjct: 255 GIKPTIVTYNTLVQGFSLRG-RIEGARLIISEMKSKGFQPDMQTYNPILSWMC----NEG 309
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+A ++L EMK + + P+ +Y L+ C+ +G L+ A +M G+ + Y LI
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G +P+ T++ ++ R + L +MK +GLVPD YN LI C + +
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A +EM + P TY L+H + +++ ++R++ G+ L+ Y
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 121 LI 122
LI
Sbjct: 403 LI 404
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
+ P+ T++ L+ G + ++A + +MK G+ PD YN LIS K ++ A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ +EM + P + TY LL + + + ++R+M + G+ N + +I A
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Query: 125 HKN 127
N
Sbjct: 617 MSN 619
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ +++ L+ G ++ AF + ++M G+VP YN LI + A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI-- 122
++ E++ + + TY L++ G + A+ +M G+ +F Y LI
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 123 VAHKNKTPVTDDFAAKVVA 141
+ KNKT D+ KVV
Sbjct: 442 LCRKNKTREADELFEKVVG 460
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+K N TF+ ++ + +++ A FL M++ G+ P + YN L+ + A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
I+ EMK +P+++TY +L +G R + ++R+M GL + Y LI
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 126 KNKTPVTDDFAAK 138
N + FA +
Sbjct: 338 SNNGDLEMAFAYR 350
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
VKPN +TF + +R + A+ L +K L P+ ++YN +++ + K + A+
Sbjct: 459 VKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSAL 518
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
++L+EMK +VKP+ T+ L++ C + + + ++M AG+ +NK Y L+ A+
Sbjct: 519 KVLKEMKEADVKPDSVTFSYLINYCGEEATIAKY---YKEMKQAGVEVNKHVYMSLVKAY 575
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +PN + +L+ ++ SR DA L +MK G+ PD+ YN LI K+K
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A L EM +KPN TY + + V++M G+ NK G
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 121 LIVAHKNKTPVTDDFAA 137
LI + K V + +A
Sbjct: 563 LINEYCKKGKVIEACSA 579
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ ++ L+ G + MQ A ++M GL P+V +YN L+ +S ++A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L+EM + PN TY ++ G L + +M GL + F Y L+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ + T+ L+ G + ++ DA +M+ G+ PDV Y LI+ K N
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A I +EM + PNV Y LL G +++ ++ +M+ GL N Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 LI 122
+I
Sbjct: 703 II 704
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P + SL+ G R ++ + L +MK +V Y ++ S +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A I++EM +PNV Y L+ + R ++++M G+ + FCY
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 121 LIVA 124
LI+
Sbjct: 493 LIIG 496
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T+ ++V G + A+ + +M G P+V +Y LI T ++ A+++L+EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
K + P++ Y L+ + R+D + + +M GL N F Y I +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P + T+ L+ G + R++DA L +M +G+ D Y+ LI K +N
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+D A ++ EM + Y C + + +G +++ A+ M A+GL YA
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 121 LIVAH 125
LI +
Sbjct: 388 LIEGY 392
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +G+KPN T+ + + G + S A ++ +M+ G++P+ L LI+ K
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A M + + +TY L++ + ++D I R+M G+ + F Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 121 LI 122
LI
Sbjct: 633 LI 634
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + G+ PN T+ +++ G + + +AF ++MK+ GLVPD +Y L+ C + +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 61 SDQAIQIL 68
++AI I
Sbjct: 748 VERAITIF 755
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +P+R T SLV G R +R+ DA +++M +G PD+ YN +I + K+K
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A +E++ ++PNV TY L++ R ++ DM + N Y+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 LIVA 124
L+ A
Sbjct: 266 LLDA 269
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++PN T+ +LV G SR DA L+ M + P+V Y+ L+ K+ +A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ EEM M + P++ TY L++ R+D N + M + G + Y LI
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
++++L+ G + R++D +M GLV + YN LI ++ + D+A + +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
F + P++ TY LL +G L++ I DM + L+ Y +I
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS-TCGKSKNSDQ 63
G KP+ +++++ + R+ DAF F +++ G+ P+V Y L++ C S+ SD
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A ++L +M ++ PNV TY LL A +G++ + +M + + Y+ LI
Sbjct: 245 A-RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 54/107 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ N T+++L+ G + + A F +QM G+ PD+ YN L+ + ++A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+ I E+M+ E+ ++ TY ++ G+++ ++ ++ GL
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQ 63
G++P+ F +L+ G +M DA+ +N M+ G P+V Y LI C K D+
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDE 325
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 123
A+++ EM+ + ++ TY L+ G +D+ +++ DM G+ ++ Y ++V
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 124 AHKNK 128
AH+ K
Sbjct: 386 AHEKK 390
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 2 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 61
M + PN F SL+ G R ++ +A L QMK GL PD+ ++ L+S +
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHA-CAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A ++ +M+ +PNV Y L+ A C + R+D + +M G + Y
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 121 LI 122
LI
Sbjct: 348 LI 349
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV P++ T+ ++V + + ++ + +MK G PD+ +YN +I K
Sbjct: 368 MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE 427
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+A+++ EM+ + P V T++ +++ + G L ++M + G+
Sbjct: 428 VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 62/124 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P+ + +L+ G +M DA+ L M+ G P+ Y LI K ++A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+++ EM+ E + +V TY L+ G++D+ ++ DM GL ++ Y ++VA
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 125 HKNK 128
H+ K
Sbjct: 402 HEKK 405
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 55/111 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P+ T+ ++V + ++ + +M+ + PD+ +YN +I K
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+A+++ EM+ + P V T++ +++ A+ G L + ++M GL
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G P+ T+++L+ G +M+DA L MK GL PDV Y+ ++S +S + D+
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 123
A+++ EM +KP+ TY L+ R + +M GL ++F Y LI
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 124 AH 125
A+
Sbjct: 529 AY 530
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L G++PN +++ ++ G R RM++ + L +M G D YN LI K N
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
QA+ + EM + P+V TY L+H+ G ++R + M GL N+ Y
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 121 LI 122
L+
Sbjct: 386 LV 387
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P+ T+ SL+ + M A FL+QM++ GL P+ Y L+ +
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A ++L EM P+V TY L++ G+++ A++ DM GL + Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 121 LI 122
++
Sbjct: 456 VL 457
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + G+ PN T+ +LV G + M +A+ L +M G P V YN LI+ +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ AI +LE+MK + P+V +Y +L +D + R+M G+ + Y+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 121 LI 122
LI
Sbjct: 491 LI 492
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ V PN T++ L+ G + A ++M+ G +P+V YN LI K +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D ++L M ++PN+ +Y +++ +GR+ V+ ++ +M G L++ Y
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 LI 122
LI
Sbjct: 316 LI 317
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G + T+++L+ G + A +M GL P V Y LI + K+ N ++A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ L++M+ + PN RTY L+ + G ++ ++R+M G + Y LI
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 125 H 125
H
Sbjct: 425 H 425
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ P+ ++ +++ G R + +A +M G+ PD Y+ LI + +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A + EEM + + P+ TY L++A +G L++ + +M G+ + Y+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 121 LI 122
LI
Sbjct: 561 LI 562
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ T+ SL+ G R ++A +M +GL PD Y LI+ +
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 95
++A+Q+ EM V P+V TY L++ R
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ GV+ N T+ +L+ G RM++A +M G++P++ YN LI K+KN
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A+++L E+K +KP++ Y + + +++ ++ +M G+ N Y
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 121 LIVAH-KNKTP 130
L+ A+ K+ P
Sbjct: 548 LMDAYFKSGNP 558
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ P+ T++S++ G + R+ D F +MK M PDV YN LI+ K
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ EMK +KPNV +Y L+ A +G + + DM GL N++ Y
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 LIVAHKNKTPVTDDF 135
LI A+ ++D F
Sbjct: 408 LIDANCKIGNLSDAF 422
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P T++ ++ + ++ A +MK GLVPD YN +I GK D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ EEMK M +P+V TY L++ G+L R+M GL N Y+ L+ A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G+KPN ++ +LV + MQ A F M+ +GLVP+ Y LI K N
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A ++ EM + V+ NV TY L+ R+ + M AG+ N Y LI
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ PN T+ SL+ + + DAF N+M +G+ +V Y LI ++ +A
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ +M V PN+ +Y L+H +DR ++ ++ G+ + Y I
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 125 HKNKTPVTDDFAAKVV 140
+ + AAKVV
Sbjct: 517 LCSLEKIE---AAKVV 529
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P+ T+ +L+ G R R+ +A +M P V Y LI+ SKN D+A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ LEEMK ++PNV TY L+ DGR + + M A G N Y LI
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSK 59
MM G +PN T+ +L+ G + ++Q+A L++M + GL PD LY +IS C SK
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 60 NSDQAIQILEEMKFMEVKPNVRTY 83
+A L+EM + PN T+
Sbjct: 348 FR-EAANFLDEMILGGITPNRLTW 370
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P T+ SL+ G + +A +L +MK G+ P+V Y+ L+ K S QA+++
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
E M +PN+ TY L+ + ++ ++ M GL + Y +I
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +GV+P+ T+ LV R+ + ++ ++K GL PDV YN +I+ GKS
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 61 SDQAIQILEEMKFME-VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
++A+ + EMK + P++ TY L+ G ++ I ++ AGL N F +
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 120 GLIVAH 125
LI +
Sbjct: 1072 ALIRGY 1077
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ PN T+++L+ G +R R+ DA M+ +G+ P Y I GKS +S A
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
++ E+MK + PN+ L++ A GR I + GL
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+L+G +P+ T+ SL+VG + + L +M+ +GL P+V + I G++
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A +IL+ M P+V TY L+ A +LD + M ++ Y
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 121 LI 122
L+
Sbjct: 334 LL 335
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIM-GLVPDVTLYNFLISTCGKSKNSDQ 63
G+ P+ ++ ++ G + R+++A N+MK G+ PD+ YN LI G + ++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
A +I E++ ++PNV T+ L+ + G+ + A+ + M G N Y L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P T+ L+ G + R+ +A M G P+ +YN LI+ GK+ +D A +
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY----AGLIV 123
+ M V+P+++TY L+ GR+D +++ +GL + CY GL
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 124 AHK 126
+H+
Sbjct: 1009 SHR 1011
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KPN TF + R ++ +A+ L +M G PDV Y LI ++ D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
++ E+MK KP+ TYI LL + + LD V +M G
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV+P T++ L+ G + ++ A Q+K G +PDV YNFL+ GKS D+
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLD 97
++ +EM E + N T+ ++ G +D
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T++ ++ + + +A L++M G PDV + N LI+T K+ D+A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
++ MK M++KP V TY LL +G++ + M G N + L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N +++ L+ ++ +A +M + G P + Y+ L+ GK ++ D + +L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+EM+ + +KPNV T+ + G+++ I++ M G G + Y LI A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM +G +P+ +SL+ + R+ +A+ +MK M L P V YN L++ GK+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 61 SDQAIQILEEMKFMEVKPNVRTY 83
+AI++ E M PN T+
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITF 611
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +GV+P R T++ ++ G R++ A F MK G+ PD +N +I+ + K
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A ++ EMK ++ P+V +Y ++ A R+D I +M ++G+ N Y+
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 121 LI 122
L+
Sbjct: 366 LL 367
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ P+ TF++++ G R +M +A +MK + P V Y +I
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTA 108
D ++I EEM+ ++PN TY LL G++ I+++M A
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +GV+P+R TF+SL+ RG + A ++M + DV YN L+ K
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A +IL +M + PNV +Y ++ A GR D + +M G+ L++ Y
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 LI 122
L+
Sbjct: 450 LL 451
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ +R ++++L+ + R ++A L +M +G+ DV YN L+ GK D+
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ EMK V PN+ TY L+ + G I R+ +AGL + Y+ LI A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
++++L+ +G +M AF L QM + ++P+V Y+ +I K+ D+A+ + EM
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+++ + + +Y LL GR + I+R+M + G+ + Y L+
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + V PN T+ +L+ G +G ++A + K GL DV LY+ LI K+
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
A+ +++EM + PNV TY ++ A +DR
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS-DQAIQILEEM 71
F +L+ R ++A N MK GL P++ YN +I CGK Q + +EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ V+P+ T+ LL C+ G + + +MT + + F Y L+ A
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 5 GVKPNRDTFHSLVVGTMRGS-RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
G++PN T+++++ +G + F ++M+ G+ PD +N L++ C + +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A + +EM ++ +V +Y LL A G++D I+ M + N Y+ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ +G PN T+ +LV R DA +MK GL V LYN L+S C ++
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 61 SDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
D+A +I ++MK E P+ T+ L+ A GR+ A + M AG F
Sbjct: 401 VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Query: 120 GLIVAHKNKTPVTD 133
+I + V D
Sbjct: 461 SVIQCYGKAKQVDD 474
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 45/102 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GVKPN ++ L+ R R A + G P+ + Y L+ G+++ D A
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
+ I EMK + V Y LL CA + +D I +DM
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 35 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 94
+MK +G+ P++ +YN LI + G++K QA I +++ PN TY L+ A
Sbjct: 305 EMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 95 RLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
D AI R+M GL L Y L+
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLL 392
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G++P+ T SLV G + ++DA Y QM+ MG+ DV + LI T K++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A+++L+ MK + PNV TY L+ GRL + +M + + N ++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 121 LIVAHKNKTPVT 132
LI A+ + ++
Sbjct: 124 LIDAYAKRGKLS 135
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 29 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 88
A L +MK G+ P+V Y+ LI+ KS A + L EM ++ PNV T+ L+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 89 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A A G+L +V+++ + M + N F Y+ LI
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ PN T+ SL+ G + R+ DA L++M + P+V ++ LI K +
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 137
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
+ + M M + PNV TY L++ R+D ++ M + G N Y+ L
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P+ F SL+ + ++ A ++MK G P+ LY +I + KS + A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ + ++M+ P TY CLL A G++D I MT AGL Y L+
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTL 497
Query: 125 HKNKTPVTDDFAAKVV 140
NK V D A K++
Sbjct: 498 LANKRLV--DVAGKIL 511
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++P+ F SLV + R+ + +M+ G P T++ LI + K+ D A+
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 403
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
++ +EMK +PN Y ++ + A G+L+ + +DM AG Y+ L+ H
Sbjct: 404 RLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMH 463
Query: 126 KNKTPVTDDFAAKV 139
V D A K+
Sbjct: 464 AGSGQV--DSAMKI 475
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 2 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 61
+LDG T+ ++ + R+ AF QMK L P ++++ L+ + GK+
Sbjct: 310 LLDG-----STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
D ++++ EM+ +P+ ++ L+ + A G+LD + +M +G N Y +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 122 IVAH 125
I +H
Sbjct: 425 IESH 428
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ TF SL+ G +R++DA +Q+ MG P+V Y LI K+++
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+++ +M +PNV TY L+ GR ++RDM + N +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 121 LIVA 124
LI A
Sbjct: 264 LIDA 267
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 55/135 (40%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G PN + +L+ G + R++D +M G+V + Y LI
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A ++ +M P++RTY LL +G++++ I M + +N Y
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 121 LIVAHKNKTPVTDDF 135
+I V D F
Sbjct: 439 IIQGMCKLGKVEDAF 453
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G KPN T+ +L+ + + A NQM G P+V YN L++ + A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+L +M ++PNV T+ L+ A G+L + M + + F Y LI
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G +PN T+++LV G R DA + L M + P+V + LI K
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A ++ M M V P+V TY L++ G LD + M G N+ Y
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 121 LI 122
LI
Sbjct: 334 LI 335
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +GV+P++ T+++L+ G + R+++A +L M G PD Y L++ +
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
S A+ +LEEM+ PN TY LLH +D+ + M ++G+ L YA
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 121 LI 122
L+
Sbjct: 411 LV 412
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQA 64
VKP+ +F L+ +++A Y ++++ G PD LYN ++ C SK S +A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS-EA 284
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + ++MK V+P+ TY L+ + GR++ ++ M AG + Y L+
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV PN T+ +++ + + +A MK G VP+ YN ++S GK
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
S++ I++L +MK PN T+ +L C G VN + R+M + G ++ +
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 121 LIVAH 125
LI A+
Sbjct: 497 LISAY 501
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T++ LV +R ++A + M G++P+ Y +I GK+ D+A+++ M
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 128
K PN TY +L R + + ++ DM + G N+ + ++ NK
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
VKPNR T++ ++ G M AF FL +M G+VPD Y LI + + +A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI--- 122
++ + + N Y LLH +G+L+ ++ ++M G+ L+ CY LI
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 123 VAHKNK 128
+ HK++
Sbjct: 658 LKHKDR 663
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ TF +L+ G R ++DA N+M + P+ YN +I + + +A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ L+EM + P+ +Y L+H G+ V + LN+ CY GL+
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ SLV G + ++++A + ++ G+ P++ +YN LI + K + +A +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
+ M + ++PN TY L+ G+LD + + +M GL L+ + Y LI H
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 2 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 61
+L G+ N T++ L+ G R R+++A + +M G+ PD Y +I+ + +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+AI++ M ++P+ Y L+H C G + + + +M GL
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++P T+ SL+ G ++ A ++M G+ P + + L+S ++ A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ EM VKPN TY ++ +G + + +++MT G+ + + Y LI
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++PN T+ L+ R ++ A FL +M GL V YN LI+ K + A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ EM +++P V TY L+ + G++++ + +MT G+ + + + L+
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 63/115 (54%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G+ PNR T+++LV G + +++AF + MK ++PD+ YN LI+ + +
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 115
+ +++++ MK ++++P+V TY L+ C G ++ M G+ N+
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ TF+S+++G + R++ AF F N+ PD N L++ K +++A
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI-- 122
+ + E + + TY ++ A D +L ++ +M GL ++F Y I
Sbjct: 611 LNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 123 VAHKNKTPVTDDFAAK 138
+ K TD+ K
Sbjct: 670 LMEDGKLSETDELLKK 685
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T+ ++ S+M+ AF +MK GLV DV Y ++ + K+
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+QA + EM+ + PNV TY L+HA ++ N + M + G N Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 121 LIVAH 125
LI H
Sbjct: 594 LIDGH 598
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + PN + ++ G + + +A+ + M+ G P+V Y +I G
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
+ +++LE M V PN TY L+ C +G LD + ++ +M
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T+ +LV G +R + +F L MK+ G +P+V Y +I+ + ++A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L M+ V PN TY ++ +G+LDR VR M G LN Y+ L+
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
KPN TF+ L+ G R + A + L +M GL PD+ YN LI + + + A +
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+L M +++P+ T+ +++A G+ D +A + M G+ L++ LI
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN ++ L+ G R+++AF +QM G P Y LI D+A +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
+EM KPNV TY L+ DG+++ N + R M
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%)
Query: 22 RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVR 81
+G ++++ L ++ +GLVP V Y L+ +S + + +ILE MK PNV
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 82 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 127
Y +++ GR++ ++ M +G+ N Y ++ + N
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +P+ T+ +V G + AF LN+M+ L P V +YN +I K K+
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + +EM+ ++PNV TY L+ GR + ++ DM + + F ++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 121 LIVA 124
LI A
Sbjct: 332 LIDA 335
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DGV PN T+++L+ G + +++ A ++ + P + YN +I K+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ + + VKP+V Y ++ G + +A+ ++M G N CY
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 121 LIVAH 125
LI A
Sbjct: 577 LIRAR 581
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ T+++L+ G + R+++ +M GLV + YN LI ++ + D A +I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
+EM V PN+ TY LL +G+L++
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++P T++ ++ G + +++D + + + G+ PDV YN +IS + + ++A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 112
+ +EMK PN Y L+ A DG + ++++M + G
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQA 64
++P +++++ G + M DA +M+ G+ P+V Y+ LIS C + SD A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD-A 310
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L +M ++ P+V T+ L+ A +G+L + +M + + Y+ LI
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G N T+++LV G + + F+ ++ GL P+ Y+FL+ K + +D+A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+++L+E+ +PN+ +Y LL +GR D A+ R++ A G N Y
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G KPN L+ + +R++ A + M G++PD + Y +L++ K N A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+Q++E+M+ N TY L+ G L++ V + GL N F Y+ L+ A
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
+++ G +PN +++ L+ G + R DA ++ G +V YN L+
Sbjct: 237 IIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR 296
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMT 107
++A +L EM + P+V TY L+++ A GR ++ ++++M+
Sbjct: 297 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS 343
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +PN T+ +V G + + AF LN+M+ + DV ++N +I + K ++
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + +EM+ ++PNV TY L+ + GR + ++ DM + N +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 LIVA 124
LI A
Sbjct: 261 LIDA 264
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ DT+++L+ G + R++D +M GLV D Y LI + D A ++
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++M V P++ TY LL +G+L++ + M + + L+ + Y +I
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
+ L GVKPN T+++++ G +Q+A+ L +MK G +PD YN LI + +
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
+ +++ EM+ + T I L+ DGRLD+
Sbjct: 516 KAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDK 552
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T SL+ G G R+ DA ++QM MG PD + LI
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAA 109
+ +A+ +++ M +PN+ TY +++ G +D ++ M AA
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 71
F++++ + + DA +M+ G+ P+V Y+ LIS C + SD A Q+L +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD-ASQLLSDM 246
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ PN+ T+ L+ A +G+ + DM + + F Y LI
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS----TCGKSKNSDQ 63
P+ + L+ + + + A + ++MK G PD ++YN LI+ T K+K ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 64 AIQILEEMKFME-VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
L++MK +E +PNV TY LL A A G++D+VNA+ +D+ + + + + + G++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 123 VAH 125
A+
Sbjct: 251 DAY 253
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 17 VVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS----TCGKSKNSDQAIQILEEMK 72
V+G +RM A + ++MK G PD ++YN LI+ T K+K ++ L++MK
Sbjct: 142 VMGKKGQTRM--AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMK 199
Query: 73 FME-VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
+E +PNV TY LL A A G++D+VNA+ +D+ + + + + + G++ A+
Sbjct: 200 GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G KPN ++ LV G + ++ +A+ LN+M GL P+ +N LIS K +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++I EM KP+V T+ L+ + ++RDM + G+ N Y LI A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQM-KIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
KP F++L+ G + R+ DA L+ M G+VPDV YN LI K A+
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++L +M+ KPNV +Y L+ G++D ++ +M+A GL N + LI A
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L G P+ +TF+ +++G + R+ +A +N+M I G PD Y +L++ K
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM-TAAGLGLNKFCYA 119
D A + + KP + + L+H GRLD A++ DM T+ G+ + Y
Sbjct: 338 VDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 120 GLIVAH 125
LI +
Sbjct: 394 SLIYGY 399
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG+KPN F+ L+ + R+ +A +M G PDV +N LIS +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A+ +L +M V N TY L++A G + +V +M G L++ Y
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 LI 122
LI
Sbjct: 570 LI 571
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T++SL+ G + + A L+ M+ G P+V Y L+ K D+A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+L EM +KPN + CL+ A + R+ I R+M G + + + LI
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+L G P+ TF+SL+ G R R++D +++ G+ PD +N L+S K
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
A +L+E PN RT+ LL + LDR
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G KP+ TF+SL+ G ++ A + L M G+V + YN LI+ + +A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG---------LGLNK 115
+++ EM F + TY L+ G +D+ ++ M G + +N
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 116 FCYAGLI 122
C +G++
Sbjct: 609 LCRSGMV 615
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DGV PN T++ ++ + R +DAF ++M+ G+ ++ YN LI +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A +++++MK + PN+ TY L+ G+L + ++ RD+ + GL + Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LIVAHKNKTPVTDDFAAKVV 140
L+ K + AAK+V
Sbjct: 379 LVSGFCRKGDTSG--AAKMV 396
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T++ LV G R A + +M+ G+ P Y LI T +S N ++A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
IQ+ M+ + + P+V TY L+H G+++ + + + M N+ Y +I+
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 125 H 125
+
Sbjct: 488 Y 488
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ N T+ L+ G + + F +M+ G+ P++ YN +++ K + A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
Q+ +EM+ V N+ TY L+ + +L+ N +V M + G+ N Y LI
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG+ PN T+++L+ G ++ A +K GL P + YN L+S + +
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++++EM+ +KP+ TY L+ A +++ + M GL + Y+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 121 LI 122
LI
Sbjct: 449 LI 450
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G PN + +L+ G + ++ A +M +GLV + Y LI+ K+ Q
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ E+M+ V PN+ TY C+++ DGR + +M G+ N Y LI
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ V PN T+ S++ G ++ +++A L +M+ +VP+ Y +I K+
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ AI++ +EM+ + V+ N L++ GR+ V +V+DM + G+ L++ Y
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 121 LI 122
LI
Sbjct: 510 LI 511
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G+ PN T+++++ G +++ +L++MK G+ PD YN LIS K N
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ I EM + P TY L+ A G++ + ++++M G+ N Y
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 121 LI 122
+I
Sbjct: 859 MI 860
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G++P+ TF+ ++ + + ++MK G+ P + N ++ ++
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++AI IL +M ME+ PN+ TY L + R D + + + G+ L++ Y
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 121 LI 122
LI
Sbjct: 684 LI 685
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 5 GVKPNRDTFHSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
G+KP+ + + +VVG + +M++A + LNQM +M + P++T Y + T K K +D
Sbjct: 603 GIKPSLMSCN-IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADA 661
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+ E + +K + + Y L+ G + ++ DM A G
Sbjct: 662 IFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ-MKIMGLVPDVTLYNFLISTCGKSK 59
M+ G+ P+ ++++L+ + R +AF L++ + + GLVP + YN L+ KS
Sbjct: 109 MLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
++D AI++ + +K VKP + TY L++ R+ V+ ++R++ +G N Y
Sbjct: 169 HTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 120 GLI 122
++
Sbjct: 228 TML 230
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 MMLDGVK----PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 56
+++DG++ P+ T+++L+ G R + +A+ +M+ G+ PDVT YN LIS
Sbjct: 35 LLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAA 94
Query: 57 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIV-RDMTAAGL 111
K+ ++ +Q+ +EM + P++ +Y L+ GR I+ D+ AGL
Sbjct: 95 KNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL 150
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L GV P+ +T++ L+ G R F L +M+ G +P+V Y LI+ K
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A + +M+ V P VR Y L+ C + G+++ ++M G+ LN Y
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 121 LI 122
LI
Sbjct: 570 LI 571
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G++ N T+++L+ G ++ +A L ++ GL PDV YN LIS G + N
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 94
+ I + EEMK +KP ++TY L+ C +G
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+KP+ ++ L+ M++A +N+MK+ G+ P V YN LI G+
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+ IL+EM+ PNV +Y L++ +L + RDM G+ Y
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 121 LIVAHKNKTPVTDDF 135
LI +K + D F
Sbjct: 535 LIDGCCSKGKIEDAF 549
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP+ T++SL+ G +Q +MK G+ P + Y+ LIS C K +
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-----EG 648
Query: 65 IQILEEM-KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 123
I++ E + M +KP++ Y +LH A G +++ + + M +GL+K Y LI+
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 124 AH 125
Sbjct: 709 GQ 710
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 62/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M D ++P+ TF++L+ G + ++DA L +MK +G VPD ++ L ++
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ A+ + E VK N T LL+A +G++++ I+ A GL N+ Y
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 121 LI 122
+I
Sbjct: 395 MI 396
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M D + P+ ++ L+ G +G RM DA ++M L+P + YN LI K+ N
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+++ ++ E MK ++P++ T+ LL G ++ ++++M G + F ++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 121 L 121
L
Sbjct: 325 L 325
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 59/122 (48%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G PN ++ +L+ +GS++ +A M+ G+ P V +YN LI C +
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 123
A + +EM ++ N+ TY L+ + G+L ++ +++ GL + F Y LI
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 124 AH 125
+
Sbjct: 608 GY 609
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
+++ G KP+ TF ++ R ++DAF +M G+ P+ YN LI +C + +
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD 545
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+D+++++ +MK + P++ Y + + ++ + +++ M GL + F Y+
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 121 LIVA 124
LI A
Sbjct: 606 LIKA 609
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 5 GVKPNRDTFHSLVVG-TMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
G+ PN TF++ + G ++RG ++ L ++ + G PDV ++ +I+ ++K
Sbjct: 455 GISPNLVTFNTFLSGYSVRGD-VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A +EM ++PN TY L+ +C + G DR + M GL + + Y I
Sbjct: 514 AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GVKP + + LV + R + +L QM + GL+ V YN +I K++ + A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
L EM+ + PN+ T+ L + G + +V+ ++ + G
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGF 491
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP+ +++++ ++ + + A+ QM+ G PD YN LI K D+A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLD 97
I+++++M+ +PNV TY L+ GR+D
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVD 267
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG KP+R T++ L+ G + + +A + QM+ G P+V Y LI +
Sbjct: 206 MRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 61 SDQAIQILEEMKFMEVKPN---VRTYICLLHAC 90
D+A++ LE M+ ++ PN +RT++ + C
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRC 298
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ GV+PN T+++L+ G + +++A +K G VP +YN LI K
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
D + EEM+ + P+V TY CL+ +G ++ + +T+ GL
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ TFH L+ G R + A L +M MGL P YN ++ K N A +
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 68 LEEM-KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+M K ++ NV +Y LL + G+L+ N ++ +M GL N+ Y
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMR---GSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 57
M + G PN ++++L+ G + +M A L +M + P++T +N LI K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 58 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 117
N ++++ +EM +VKPNV +Y L++ G++ ++ M +AG+ N
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 118 YAGLI 122
Y LI
Sbjct: 369 YNALI 373
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 2 MLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MLD VKPN +++SL+ G G ++ +A ++M G+ P++ YN LI+ K+
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+A+ + +K P R Y L+ A G++D A+ +M G+
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T SL+ G +G+R Q+A ++ M G VP+V +YN +I+ K+++
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+++ M+ ++ + TY L+ + GR ++RDM + N +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 121 LI 122
LI
Sbjct: 260 LI 261
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ V PN T++SL+ G + DA Y + M G PDV YN LI+ KSK
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 112
+ +++ EM + + + TY L+H G+L+ + M G+
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T+++L+ G + R++D +M GLV D YN LI ++
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ M V P++ TY LL +G++++ +V D+ + + ++ Y
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 121 LI 122
+I
Sbjct: 435 II 436
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGT-MRGSRMQDAFYFLNQM-KIMGLVPDVTLYNFLISTCGKS 58
M+ G PN T SLV G +RG+ DA NQM + GL P+V YN L+
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTF-DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 59 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
N +A+ + M+ + PN+RTY L++ A G LD I M +G N Y
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 119 AGLIVA 124
++ A
Sbjct: 426 TNMVEA 431
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G PN T+ SL+ G + + A Y N+M G P+V +Y ++ + +A
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
++E M P+V T+ + GRLD + R M
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
DG+ TF LV G + R+++ L +M+ PDV Y +I T N D
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++++ +EM+ E+KP+V Y L+ DGR++R + +M + +++ Y LI
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLI 375
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +GV P+ T++SL+ G + S+ +D M G P++ +N L+ + + +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAA 109
D+A+ +LEEMK V P+ T+ L+ +G LD + R M A
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ G KP+ T+++L+ G + S+ Q+A +L +M GL PD YN LI+ K
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A +I+ + F P+ TY L+ +G +R A+ + G+ N Y
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 121 LIVAHKNK 128
LI N+
Sbjct: 397 LIKGLSNQ 404
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +G++P+ T+++L+ G +G +Q A + G VPD Y LI
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+++A+ + E +KPNV Y L+ + G + + +M+ GL
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M VKPN + F S++ R + A+ L +K L P+ +++N +++ + KN
Sbjct: 434 MCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKN 493
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A+ ++++MK VKP+ T+ L++ C + D + +M AG+ K Y
Sbjct: 494 VSSALMVVKQMKEAGVKPDSITFGYLINNCTQE---DAITKYYEEMKQAGVQATKRIYMS 550
Query: 121 LIVAH 125
LI A+
Sbjct: 551 LIDAY 555
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++PN F+ ++ G R + A + QMK G+ PD + +LI+ C + D
Sbjct: 474 LEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQE---DAIT 530
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
+ EEMK V+ R Y+ L+ A AA G+ ++ ++ D + N+
Sbjct: 531 KYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVLVDPDVPAINQNEL 581
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P T++S++ G + R+ DA L+ M PDV ++ LI+ K+K
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D ++I EM + N TY L+H G LD ++ M ++G+ N +
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291
Query: 121 LIVAHKNKTPVTDDFA 136
++ + +K + FA
Sbjct: 292 MLASLCSKKELRKAFA 307
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + VKPN T ++V G +M++A F +MK +G+ P++ ++N LI +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
D ++++ M+ VKP+V T+ L++A ++ G + R I DM G+
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ +G KP+ T+ +LV R +++++ GL PD L+N +I+ +S N
Sbjct: 345 LIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 404
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIV 103
DQA++I E+MK KP T+ L+ G+L+ + ++
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G KPN + L+ G + ++DA L++M G PDV Y+ +++ K+
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A+ +F + N Y L+ GR+D + +M+ G + +CY
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 121 LIVAHKNKTPVTDDFA 136
LI A V + A
Sbjct: 473 LIDAFTKHRKVDEAIA 488
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 15 SLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKF 73
SLV+G + + ++ + + M G P+V +Y LI KS + + AI++L M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 74 MEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
KP+V TY +++ +GR++ GL +N Y+ LI
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 1 MMLDGVKPNRDTFHSLV----VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 56
M+ +G+KPN ++++L+ V M G+ A L +K G++PDV Y L+++ G
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGT----ALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 57 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
+S+ +A ++ M+ KPNV TY L+ A ++G L I R M G+ N
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 117 CYAGLIVA-HKNKTPVTDD 134
L+ A ++K V D
Sbjct: 462 SVCTLLAACSRSKKKVNVD 480
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +GV P+ T + ++ G + A + MK + PD T +N +I K
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 61 SDQAIQILEEM--KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
S QA+ + M K E +P+V T+ ++H + G ++ A+ M A GL N Y
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 119 AGLIVAH 125
L+ A+
Sbjct: 359 NALMGAY 365
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +G++P+R T+++L+ + R A M+ G +P T YN +I++ G +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D ++L +MK + PNV T+ L+ GR + + +M + GL + Y
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 121 LIVAHKNK 128
LI A+ +
Sbjct: 590 LINAYAQR 597
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P T++ ++ R D L +MK G++P+V + L+ GKS + A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
I+ LEEMK + +KP+ Y L++A A G ++ R MT+ GL + LI A
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ PN T +LV + R DA L +MK +GL P T+YN LI+ +
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
S+QA+ M +KP++ L++A D R A+++ M G+ + Y
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 121 LIVA 124
L+ A
Sbjct: 660 LMKA 663
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 59/114 (51%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP +++L+ G ++ ++DA +++M+ G+ PD Y+ LI + + A
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+L+EM+ +V+PN + LL G + ++++M + G+ ++ Y
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
V+PN F L+ G Q F L +MK +G+ PD YN +I T GK D A+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGR 95
+ M ++P+ T+ L+ GR
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 64/124 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T+++++ + +++DA LNQ+ G P + YN +I K+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +AI++L+EM+ ++KP+ TY L+ + +G++D + G+ N +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 121 LIVA 124
+++
Sbjct: 525 IMLG 528
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ T+ L+ T R S + A L++M+ G PDV YN L++ K D+AI+
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG---------LNKFCY 118
L +M +PNV T+ +L + + GR ++ DM G +N C
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 119 AGLI 122
GL+
Sbjct: 357 KGLL 360
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+KP+ T+ SLV G R ++ +A F ++ + MG+ P+ +N ++ KS+ +D+AI
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
L M KPN +Y L+ A +G ++ ++ GL
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +PN +++ L+ G + +M A +L +M G PD+ YN +++ K + A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++IL ++ P + TY ++ A G+ + ++ +M A L + Y+ L+
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 125 HKNKTPVTDDFAAKVVAIYFF 145
+ V + AI FF
Sbjct: 494 LSREGKVDE-------AIKFF 507
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
V P+ T+++++ +++ A L++M PDV Y LI + A+
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 114
++L+EM+ P+V TY L++ +GRLD + DM ++G N
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ TF+ L+ R + A L +M G P+ YN L+ K K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
D+AI+ LE M P++ TY +L A DG+++ I+ +++ G
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGS-RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
M G +PN T H++++ +M + R DA L M G P V +N LI+ +
Sbjct: 300 MPSSGCQPNVIT-HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
+AI ILE+M +PN +Y LLH + ++DR + M + G CY
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------CYP 412
Query: 120 GLIVAHKNKTPVTDD 134
++ + T + D
Sbjct: 413 DIVTYNTMLTALCKD 427
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSKNSDQ 63
G P+ T++ LV G + R+ +A FLN M G P+V +N ++ S C + D
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD- 327
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A ++L +M P+V T+ L++ G L R I+ M G N Y L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P T+++++ G + + A L++M+ L PD Y+ L+ + D+A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
I+ E + M ++PN T+ ++ + DR + M G N+ Y LI
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ TF SLV G +R +A ++Q+ +G P+V +YN +I + +
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+ +L+ MK M ++P+V TY L+ G I+ DM G+ + ++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 121 LI 122
LI
Sbjct: 260 LI 261
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++P+ T++SL+ + L+ M MG+ PDV ++ LI GK +A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ EM V PN+ TY L++ G LD ++ + + G N Y LI
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 125 HKNKTPVTD 133
+ V D
Sbjct: 334 YCKAKRVDD 342
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +PN +++++ ++ A L MK MG+ PDV YN LI+ S +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+IL +M M + P+V T+ L+ +G+L +M + N Y LI
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ V P+ T++SL+ G R A+ L+ M GLVPD Y +I + KSK
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A + + ++ V PNV Y L+ G++D + ++ M + N +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 121 LI 122
LI
Sbjct: 573 LI 574
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSK 59
M L G + N + L+ G R+ +A +MK P V Y LI S CG +
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
S +A+ +++EM+ +KPN+ TY L+ + + + ++ ++ M GL N Y
Sbjct: 339 KS-EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 120 GLIVAHKNKTPVTD 133
LI + + + D
Sbjct: 398 ALINGYCKRGMIED 411
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P++ T+ S++ + R+++A + ++ G+ P+V +Y LI K+ D+A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+LE+M PN T+ L+H ADG+L + M GL
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T+ SL++G + + AF N+M + G + Y LI ++ D+A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +MK E P VRTY L+ + R +V++M G+ N Y LI
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN TF++L+ G ++++A +M +GL P V+ LI K + D A
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
++M KP+ TY + +GRL ++ M G+ + F Y+ LI +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ PN T+++L+ G + ++DA + M+ L P+ YN LI KS N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-N 442
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A+ +L +M +V P+V TY L+ G D ++ M GL +++ Y
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 121 LI 122
+I
Sbjct: 503 MI 504
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KPN T+ L+ + + A L QM GL+P+V YN LI+ K + A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 65 IQILEEMKFMEVKPNVRTY 83
+ ++E M+ ++ PN RTY
Sbjct: 413 VDVVELMESRKLSPNTRTY 431
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ PN T++ L+ G + S + A LN+M ++PDV YN LI +S N D A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L M + P+ TY ++ + R++ + + G+ N Y LI
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 1 MMLDGVKPNRDTFHSLV----VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 56
M+ +G+KPN ++++L+ V M G+ A L +K G++PDV Y L+++ G
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGT----ALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 57 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
+S+ +A ++ M+ KPNV TY L+ A ++G L I R M G+ N
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 117 CYAGLIVA-HKNKTPVTDD 134
L+ A ++K V D
Sbjct: 330 SVCTLLAACSRSKKKVNVD 348
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +GV P+ T + ++ G + A + MK + PD T +N +I K
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 61 SDQAIQILEEM--KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
S QA+ + M K E +P+V T+ ++H + G ++ A+ M A GL N Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 119 AGLIVAH 125
L+ A+
Sbjct: 227 NALMGAY 233
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
V+P R ++ + + +++A + M GL+PD+ Y +I T + +A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 66 QILEEMKFMEVKPNVRTYICLL-----------HACAADGRLDRVNA--IVRDMTAAGLG 112
+ E+MK +KP+V TY LL C+ G + + A ++R+ +AAG+G
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIG 706
Query: 113 LNKFCYAGLI 122
L+ CY LI
Sbjct: 707 LDVVCYTVLI 716
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 25 RMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEMKFMEVKPNVRTY 83
R+++AF L +MK G+VPDV Y LI C + K D A+ +++EM + P++ TY
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD-ALDLIDEMIGNGMSPDLITY 461
Query: 84 ICLLHACAADGRLDRVNAIVRDMTAAGLG----LNKFCYAGLIVAHKNKTPVTDDF 135
L+ A +G + V I M A G N GL A K K +DF
Sbjct: 462 NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE--AEDF 515
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +PN T+ +V G + A LN+M+ + DV ++N +I + K ++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + +EM+ ++PNV TY L+ + GR + ++ DM + N +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 LIVA 124
LI A
Sbjct: 336 LIDA 339
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ T+++L+ G + R++D +M GLV D Y LI + D A ++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 127
++M V P++ TY LL +G+L++ + M + + L+ + Y +I
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 128 KTPVTDDF 135
V D +
Sbjct: 518 AGKVDDGW 525
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T SL+ G G R+ DA ++QM MG PD + LI
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAA 109
+ +A+ +++ M +PN+ TY +++ G D ++ M AA
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 71
F++++ + + DA +M+ G+ P+V Y+ LIS C + SD A Q+L +M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD-ASQLLSDM 321
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ PN+ T+ L+ A +G+ + DM + + F Y L+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ T+++++ G + + AF + +++ G PDV YN L+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ +++ +M + PNV TY L+ DG+++ +++ M GL + + Y
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 LIVA 124
LI A
Sbjct: 374 LIAA 377
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ P+ ++ L+ R R+ A FL M G +PD+ YN +++T K+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+DQA++I ++ + PN +Y + A + G R ++ +M + G+ ++ Y
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 LI 122
+I
Sbjct: 479 MI 480
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSKNSDQAI 65
+P+ +++L+ G + +R+ DA L++M+ PD YN +I S C + K D A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK-LDLAL 213
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L ++ +P V TY L+ A +G +D ++ +M + GL + F Y +I
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G PN +++++ A + + +M G+ PD YN +IS + D+A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 65 IQILEEMKFMEVKPNVRTY-ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L +M+ E P+V TY I LL C A D +N ++ M G N+ Y LI
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN-VLESMVGNGCRPNETTYTVLI 550
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 52/124 (41%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + PN T+ L+ R ++++A L MK GL PD Y+ LI+ +
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D AI+ LE M P++ Y +L +G+ D+ I + G N Y
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 121 LIVA 124
+ A
Sbjct: 444 MFSA 447
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ D +P T+ L+ TM + +A +++M GL PD+ YN +I K
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A +++ ++ +P+V +Y LL A G+ + ++ M + N Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 121 LIVA 124
LI
Sbjct: 339 LITT 342
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM +G+ P+ T++S++ R + +AF L M+ P V YN ++ K+
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 94
+ AI +LE M +PN TY L+ G
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + GV N T+++L+ G + R++DA ++QM + G PD YN L++ + +
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A I++ M +P++ TY L+ GR++ + ++R + G+ L Y
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 121 LIVAHKNKTPVTD 133
+I K T+
Sbjct: 616 VIQGLFRKRKTTE 628
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
DG P++ TF++LV G + ++ A ++ M G PDV YN +IS K +
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
A+++L++M + PN TY L+ + +++ + R +T+ G+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ PN T+++L+ + +++++A + G++PDV +N LI ++N
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A+++ EEM+ +P+ TY L+ + + G+LD +++ M +G + Y
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 121 LI 122
LI
Sbjct: 476 LI 477
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L G + T+++L+ G + ++ ++A ++M++ G+ + YN LI KS+
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A Q++++M KP+ TY LL G + + IV+ MT+ G + Y
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 121 LI 122
LI
Sbjct: 581 LI 582
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G +P+ T++ L+ ++ +A L QM++ G V YN LI K+
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A +I +EM+ V N TY L+ R++ ++ M G +K+ Y
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 LIV 123
L+
Sbjct: 546 LLT 548
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSKNSDQ 63
G+ P+ TF+SL+ G + A +M+ G PD YN LI S C K K D+
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDE 453
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A+ +L++M+ +V TY L+ + I +M G+ N Y LI
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG P+ T++ L+ +G++ A LN MK +G+ P V Y LI ++ N
Sbjct: 280 MARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ L+EM +P+V Y ++ G LD+ + R+MT G N F Y
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 121 LI 122
+I
Sbjct: 400 MI 401
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG P+ T++ L+ R +M ++M G PD YN L+ GK
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A+ L MK + + P+V Y L+ + G L+ + +M AG + CY
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 121 LIVAH 125
+I +
Sbjct: 365 MITGY 369
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ + +L+ G R ++ YFL++M G PDV Y +I+ S D+A
Sbjct: 319 GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ EM PNV TY ++ G ++++M + G N Y+ L+
Sbjct: 379 KEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P+ TF++L+ G ++ +A +++M G PDV YN +++ +S ++ A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +L +M+ VK +V TY ++ + DG +D ++ ++M G+ + Y L+
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSKNSDQA 64
VK + T+ +++ R + A +M+ G+ V YN L+ C K +D A
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +L++M E+ PNV T+ LL +G+L N + ++M G+ N Y L+
Sbjct: 284 L-LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+K + T++SLV G + + D L M +VP+V +N L+ K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIV 103
+A ++ +EM + PN+ TY L+ RL N ++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G+ PN T++SL+ G + +R+++A ++ M G PD+ +N LI+ K+
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTA 108
D +++ EM V N TY L+ G+L+ + ++M +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
LD VK + ++ G + + +AF N+M+I G D+ YN LI + D
Sbjct: 261 LDAVK-----YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L +M ++ PNV T+ L+ + +G+L + ++++M G+ N Y LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ TF+ L+ G + +R+ D +M + G++ + YN L+ +S
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ +EM V+P++ +Y LL +G L++ I + + + L+ Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 121 LIVAHKNKTPVTDDF 135
+I N + V D +
Sbjct: 514 IIHGMCNASKVDDAW 528
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ PN TF L+ ++ ++++A L +M G+ P+ YN LI K ++AI
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
Q+++ M P++ T+ L++ R+D + R+M+ G+ N Y L+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP D HSL R ++DA L M G P ++N ++ C K+ + D+A
Sbjct: 371 GIKPFSDVIHSLC----RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L+ M+ +KP+V TY ++ A G +D I+ + L+ Y LI
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ G P+ T L+ R + DA MK GL DV YN L+ GK+
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ ++++EM+ + P+V TY L+H+ G +D N I+ ++ G + +
Sbjct: 494 LNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD 553
Query: 121 LI 122
+I
Sbjct: 554 VI 555
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
++ G P+ T L+ R + DA MK GL DV YN L+ GK+
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ ++++EM+ + P+V TY L+H+ G +D N I+ ++ G + +
Sbjct: 494 LNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD 553
Query: 121 LI 122
+I
Sbjct: 554 VI 555
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T SL+ G +G+R+ DA +++M+ MG PDV +YN +I K
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+++ + M+ V+ + TY L+ GR ++RDM + N +
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 121 LI 122
+I
Sbjct: 250 VI 251
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DGV+ + T++SLV G R DA + M + +VP+V + +I K
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A+++ EEM V P+V TY L++ GR+D ++ M G + Y
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 121 LI 122
LI
Sbjct: 320 LI 321
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T+++L+ G + R+ + +M GLV D YN +I ++
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A +I M+ +PN+RTY LL+ + R+++ + +M + + L+ Y
Sbjct: 365 PDAAQEIFSR---MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN- 420
Query: 121 LIVAH 125
IV H
Sbjct: 421 -IVIH 424
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +PN +++L+ G + + A LN+M+ GL DV YN L++ S
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A ++L +M + P+V T+ L+ G LD + ++M + + N Y
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LI 122
+I
Sbjct: 287 II 288
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ TF SL+ G +R+ DAF + M G P+V +YN LI K+
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+++L EM+ + +V TY LL GR ++RDM + + +
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 121 LI 122
LI
Sbjct: 252 LI 253
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ V PN T++S++ G R+ DA + M G P+V YN LIS K +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 96
D+ +++ + M ++ TY L+H G+L
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV PN ++ L+ G + M +A L++M+ + L PDV Y LI+ +A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ ++MK + P+ TY L+H + +++ + +MTA+G+ N ++ LI
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 125 HKN 127
+ N
Sbjct: 454 YCN 456
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV+PN TF +L+ G ++ A +M I G+VPDV Y LI K N
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 97
+A+++ +M + PN T+ CL+ +GRL
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ S++ G +R R + M GLVPDV +Y L C K + ++
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
L+EM + +KPNV Y + D +++ + M G+ N + Y+ +I
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV PN T+ +++ G + ++ A+ ++ + L+P+V ++ L+ K++ A
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ M V PN+ Y CL+H G + ++ +M + L + F Y LI
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN F +LV G + + A M G+ P++ +YN LI KS N +A+ +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
L EM+ + + P+V TY L++ + ++ N + + M + + Y LI
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ PN+ T+ +L+ ++ A L M G PDV Y I C ++K A
Sbjct: 554 GLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLA 613
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVN---AIVRDMTAAGLGLNKFCYAGL 121
+ EEM+ ++KPN TY LL A + G L V AI +DM AG N L
Sbjct: 614 FSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKEL 673
Query: 122 I 122
I
Sbjct: 674 I 674
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 29 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 88
A + MK +G+ P+ ++ LIS C + +QA + EEM +PN + + LLH
Sbjct: 393 ALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLH 452
Query: 89 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
AC + DR + + + G +N+ YA IV+
Sbjct: 453 ACVEACQYDRAFRLFQ--SWKGSSVNESLYADDIVS 486
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 27 QDAFYFLNQMKIMGLVP-DVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 85
QD + +M+ GL+ D Y +I +K A+++ ++MK + V PN T+
Sbjct: 355 QDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSS 414
Query: 86 LLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
L+ ACA G +++ N + +M A+G N C+ L+ A
Sbjct: 415 LISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 24 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 83
S + D F +MK G PD+ YN LI++ G+ D+AI I EE++ + KP++ +Y
Sbjct: 459 SHIHDLF---EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISY 515
Query: 84 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
L++ +G +D + ++M GL + Y+ L+
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
KP+ +++SL+ + + +A +M+ GL PDV Y+ L+ GK++ + A
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL----I 122
+ EEM +PN+ TY LL +GR + M GL + Y L
Sbjct: 569 LFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQS 628
Query: 123 VAH-----KNKTPVT 132
V+H + K P+T
Sbjct: 629 VSHGKSRIRRKNPIT 643
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 10 RDTF-HSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
RD + +++++ TM R + +A N+M GL +V YN L+ K K D+AIQ+
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVR 104
M +PN TY LL+ A+G+L R++ +V
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG P+ T++ L+ R + +A +++ PD+ YN LI+ GK+ +
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A +EM+ + P+V TY L+ R++ ++ +M G N Y
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 121 LI 122
L+
Sbjct: 588 LL 589
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + PN +++S V G R + DA ++ MK G+ PDV YN LI+ N
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
++ ++ EMK + P+ TY L+ G LDR
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 50/105 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G+ P+ T+++L+ + +++ N+MK GL PD Y LI K +
Sbjct: 289 MKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGD 348
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRD 105
D+A+++ EE ++ Y ++ G++D +V++
Sbjct: 349 LDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G PN TF+ L+ G + +R+ D +M + G+V D YN LI +
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ +EM +V PN+ TY LL +G ++ I + + + L+ Y
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 LIVAHKNKTPVTDDF 135
+I N + V D +
Sbjct: 514 IIHGMCNASKVDDAW 528
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
LD VK + ++ G + + +AF N+M++ G+ ++ YN LI + D
Sbjct: 261 LDAVK-----YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L +M ++ PNV T+ L+ + +G+L + ++M G+ + Y LI
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ PN TF L+ ++ ++++A +M G+ PD Y LI K + D+A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
Q+++ M PN+RT+ L++ R+D + R M+ G+ + Y LI
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +PN TF +L+ G R+ +A +++M MG PD+ N L++ S +A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ ++++M +PN TY +L+ G+ ++R M + L+ Y+ +I
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV+P F +L+ G R +++ YF+++ +G PDV Y +I+ ++A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ +EM PNV TY ++ G+ A++++M + G N Y+ L+
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 125 HKNKTPVTD 133
KN V +
Sbjct: 442 LKNAGKVLE 450
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG P+ T++ L+ G++ A LN M+ +G+ P V + LI ++
Sbjct: 283 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ ++E + P+V Y ++ + G L++ + ++MT G N F Y
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 121 LI 122
+I
Sbjct: 403 MI 404
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G KP+ ++ +++ + ++ DA ++M G+ PDVT YN LI K K+
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 61 SDQAIQILEE-MKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
A+++ + ++ V PNV+T+ ++ + GR+D I M + + Y+
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 120 GLI 122
LI
Sbjct: 295 SLI 297
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV+ N ++L+ G +R SR+ +A +FL +M G P V YN LI K+
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+A ++EM KP+++TY LL D ++D + +GL
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV PN T++ L+ + + + A FL+ M G PDV Y+ +I+ K+ D A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 65 IQILEEMKFMEVKPNVRTYICLL 87
+++ +EM V P+V Y L+
Sbjct: 204 LELFDEMSERGVAPDVTCYNILI 226
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 71
++ ++ G +GS++ +A+ + I G+ PDV YN +IS CGKS SD + + +M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LFHKM 598
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
K +P+ TY L+ C G +D+ ++ +M + G + F
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P TF++L+ G R+ +A +N+M GL DV Y +++ K ++ A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +L +M+ +KP+V Y ++ DG + +M G+ N F Y +I
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T+ ++V G + + A L++M+ + PDV +Y+ +I K + A + EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ PNV TY C++ + GR ++RDM + + + LI A
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
+ GV+P+ T++ ++ G S + DA ++MK G PD + YN LI C K+ D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 63 QAIQILEEMK 72
++I+++ EM+
Sbjct: 625 KSIELISEMR 634
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 71
++ ++ G +GS++ +A+ + I G+ PDV YN +IS CGKS SD + + +M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LFHKM 598
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
K +P+ TY L+ C G +D+ ++ +M + G + F
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
+ GV+P+ T++ ++ G S + DA ++MK G PD + YN LI C K+ D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
++I+++ EM+ + T I ++ DGRLD+
Sbjct: 625 KSIELISEMRSNGFSGDAFT-IKMVADLITDGRLDK 659
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P TF++L+ G R+ +A +N+M GL DV Y +++ K ++ A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +L +M+ +KP+V Y ++ DG + +M G+ N F Y +I
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T+ ++V G + + A L++M+ + PDV +Y+ +I K + A + EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ PNV TY C++ + GR ++RDM + + + LI A
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + P T++S++ G + R+ DA L+ M G PDV ++ LI+ K+K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D ++I EM + N TY L+H G LD ++ +M + G+ + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 121 LIVAHKNKTPVTDDFA 136
++ +K + FA
Sbjct: 121 MLAGLCSKKELRKAFA 136
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T+ LV + R++ L +M G +PD+T YN L+ KS + +A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +M+ PN TY LL+ GR D V + +M ++ + Y LI
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK- 59
M GV + ++ +L+ R R + + L++MK + P + YN +I+ C +
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
+ + + + EM+ ++P++ TY LL ACA G D + R M G+ + Y+
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 120 GLI 122
L+
Sbjct: 287 HLV 289
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G PN +T+ L+ + R D +MK PD YN LI G+
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ + + +M ++P++ TY ++ AC G + I++ MTA + + Y G
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 121 LIVA 124
+I A
Sbjct: 463 VIEA 466
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G P+ +++ L+ + +++A +QM+ G P+ Y+ L++ G+S
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D Q+ EMK P+ TY L+ G V + DM + + Y G
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 121 LIVA 124
+I A
Sbjct: 428 IIFA 431
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 60/126 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + ++P+ +T+ ++ +G +DA L M +VP Y +I G++
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A+ M + P++ T+ LL++ A G + AI+ + +G+ N+ +
Sbjct: 473 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNA 532
Query: 121 LIVAHK 126
I A+K
Sbjct: 533 QIEAYK 538
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++P+ T+++L++ R R ++ + + QM+ +GL P + Y LIS GK K +QA
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
Q+ EE+ +K + Y ++ G + +++ M AG+
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 58/118 (49%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++P+ T+++L+ R S + A M+ PD+ YN +IS G+ + +A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ E++ P+ TY LL+A A + ++V + + M G G ++ Y +I
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
L G P+ T++SL+ R + QM+ MG D YN +I GK D
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419
Query: 63 QAIQILEEMKFMEVK-PNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
A+Q+ ++MK + + P+ TY L+ + R A++ +M G+ Y+ L
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 122 IVAH 125
I +
Sbjct: 480 ICGY 483
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + P T++S++ G + R+ DA L+ M G PDV ++ LI+ K+K
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D ++I EM + N TY L+H G LD ++ +M + G+ + +
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 121 LIVAHKNKTPVTDDFA 136
++ +K + FA
Sbjct: 226 MLAGLCSKKELRKAFA 241
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 2 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 61
+ D +KP+ TF+ L+ G + + DA ++ MK+ PDV Y + K +
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
+ ++LEEM+ PNV TY ++H+ ++ + M G + Y+ L
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 122 I 122
I
Sbjct: 385 I 385
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV+ N TF +L+ G R ++ AF ++ + PD ++N LIS CG+S
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 61 SDQAIQILEEMK--FMEVKPNVRTYICLLHACAADGRLDRVNAI 102
D+A +L EMK + P+ + L+ AC G+++R +
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEV 631
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 64/121 (52%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++PN ++++++ +A + M+ + +V YN +I GK+ ++A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
+++EM+ ++PN TY ++ G+LDR + + + ++G+ +++ Y +IVA+
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 126 K 126
+
Sbjct: 481 E 481
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 65/121 (53%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
+M + KPN T +V G R R++D F+ +MK M + ++ ++N LI+ + +
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D ++L MK VK +V TY +++A ++ G +++ + ++M AG+ + Y+
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 121 L 121
L
Sbjct: 371 L 371
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS---TCGKSKNS 61
G K + F++++ M+DA L +MK +GL P + YN LI GK + S
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
+ + ++ E ++V PN+RT+ L+ A +++ +V+ M G+ + Y +
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 122 IVAHKNK 128
+ K
Sbjct: 230 ATCYVQK 236
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ T+ +++ G + + + A ++M L P V Y LI K+ +QA
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
Q EMK V+PNV T+ LL+ G +D + M G+ NK+ Y LI
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV P+ TF++L+ G + S + +AF M++ PDV YN +I ++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 65 IQILEEM--KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY---- 118
+L M K +V PNV +Y L+ +D + DM + GL N Y
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 119 AGLIVAHK 126
GL AH+
Sbjct: 324 KGLSEAHR 331
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T++ L+ R ++ AF + M+ GL P+V N ++ KS+ D+A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
EEM + P+ T+ L+ GR+D + M + N Y LI
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
+M G+ PN T++SL+ ++ + +A MK + P+ Y LI+ K +
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A +EM+ +KP+ +Y ++ A G + A+ A G + CY
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 121 LIVAHKNKTPVTDDFA 136
+I N D F+
Sbjct: 803 MIEGLSNGNRAMDAFS 818
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 2 MLDGVKPNRD-----TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 56
M + ++ NR ++++++G + +A+ L + + G +P V YN +++
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354
Query: 57 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
K D+A+++ EEMK + PN+ TY L+ G+LD + M AGL
Sbjct: 355 KMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ ++ L+ G ++ + + MK G V D YN +I K ++A Q+
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
LEEMK +P V TY ++ A RLD + + + + LN Y+ LI
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P F +L+ G + R+ A L++MK L D+ LYN I + GK D A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
+ E++ +KP+ TY ++ RLD
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 72
++ ++ G + ++ A+ L +MK G P V Y +I K D+A + EE K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 73 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ NV Y L+ GR+D I+ ++ GL N + + L+ A
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 57/111 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + G P+ +T +V+G ++ +++++ + + M+ P + Y LI +
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
SD + + ++M+ + +P V + L+ A +GR+D +++ +M ++ L
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
+PN TF L+ G + ++AF L +M+ + PD +N LIS K ++ I
Sbjct: 234 RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGID 293
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH- 125
+LE MK +PN TY +L+ R ++ M + G+ + Y +++
Sbjct: 294 LLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 126 KNKTPVTDDFAAKVVAIYFFI 146
+ K+ V D+ + + + F+
Sbjct: 354 ETKSVVEMDWVLRQMVNHGFV 374
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+++L+ G + R++D +M GLV + Y +I ++ + D A +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++M V ++ TY LLH + G+LD I + + + + LN F Y +I
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +P+ T+ ++V G + + A LN+M+ + +V ++N +I + K ++
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+ + EM+ ++PNV TY L++ GR + ++ +M + N +
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 LIVA 124
LI A
Sbjct: 334 LIDA 337
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + PN TF++L+ + ++ +A +M + PD YN LI+
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A Q+ + M + PN++TY L++ R++ + R+M+ GL N Y
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 121 LI 122
+I
Sbjct: 439 II 440
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 14 HSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS-DQAIQILEEMK 72
+S++ ++ ++ +QMK GL PDV YN L++ C K KN +AI+++ E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 73 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 128
++ + Y +L CA++GR + ++ M G N + Y+ L+ ++ K
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWK 285
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMR-GSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
M DG+KP+ T+++L+ G ++ + A + ++ G+ D +Y +++ C +
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
S++A +++MK PN+ Y LL++ + G + + ++ +M + GL NK
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 120 GLI 122
L+
Sbjct: 312 TLL 314
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
DG++P+ +++L+ R A + M+ MG PD YN ++ G++
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
A + EEMK + + P +++++ LL A + + + AIV++M+ G+ + F
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 13 FHSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
+++ + G M R ++A +MK P YN +I+ GK+ S + ++ EM
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
+ + KPN+ TY L++A A +G ++ I + GL + + Y L+ ++
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 366
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
DG++P+ +++L+ R A + M+ MG PD YN ++ G++
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
A + EEMK + + P +++++ LL A + + + AIV++M+ G+ + F
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 13 FHSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
+++ + G M R ++A +MK P YN +I+ GK+ S + ++ EM
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
+ + KPN+ TY L++A A +G ++ I + GL + + Y L+ ++
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 344
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +P+ T+ ++V G + A LN+M+ + +V +Y+ +I + K ++
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + EM+ V+PNV TY L+ GR + ++ DM + N ++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 LIVAHKNK 128
LI A K
Sbjct: 329 LIDAFVKK 336
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T +SL+ G G+R+ DA ++QM MG PD + LI
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A+ +++ M +P++ TY +++ G D ++ M AA + N Y+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 121 LI 122
+I
Sbjct: 259 VI 260
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + PN T+ SL+ G R+ +A L M +P+V YN LI+ K+K
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
D+ +++ EM + N TY L+H D + + M + G+ N Y
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+++L+ G + R+ +M GLV + Y LI ++++ D A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
++M + V PN+ TY LL +G+L +
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFY--FLNQMKIMGLVPDVTLYNFLISTCGKSKN-S 61
G+KP+ T++ L+ R RMQ L +M+ +GL P+V Y LIS G++K S
Sbjct: 409 GLKPSAATYNILMDAYAR--RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
D A MK + +KP+ +Y L+HA + G ++ A +M G+ + Y +
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 122 IVAHK 126
+ A +
Sbjct: 527 LDAFR 531
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GVK ++D F LV ++A +M+ G+ + +YN L+ KS +
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++ + EM+ +KP+ TY L+ A A + D V ++R+M GL N Y
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 121 LIVAHKNKTPVTDDFAA 137
LI A+ +T D AA
Sbjct: 455 LISAY-GRTKKMSDMAA 470
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
+ + G +P+ T+ L+ G + RM DA +M+ G VPD +YN L+ K++
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
+A Q+ E+M V+ + TY L+ +GR + + D+ G
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ T++SL+ + +DA +++K+ G PD + Y LI C KS D A++I
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
EM++ P+ Y CLL ++ + M G+ + + Y LI
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T++ ++ G + R A L+++ G D+ +YN LI+ GK+ D+A Q+ + M
Sbjct: 667 TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM 726
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
K + P+V +Y ++ + G+L ++ M AG
Sbjct: 727 KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 2 MLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+D G KPN F SL+ G + ++ AF L +M G P+V + LI K
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 61 SDQAIQI-LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
+++A ++ L+ ++ KPNV TY ++ + +L+R + M GL N Y
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 120 GLIVAH 125
LI H
Sbjct: 398 TLINGH 403
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + GV P+ ++ +V+G R ++Q+A +L M G +PD +++ ++
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++AI +M + KPN+ + L+ G + + ++ +M G N + +
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 121 LI 122
LI
Sbjct: 328 LI 329
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 57/115 (49%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+ +L+ G ++ R DA L+ M+ G + +Y+ LIS K +++A+ +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+M KPN+ Y L+ +G+ + I+ M A+G N + Y+ L+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ T+ +L+ G + R+ +A L++M+ G P +YN LI K + + ++
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 127
++ M PN TY L+H G+LD+ +++ M ++ N Y LI
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 128 KTPVTD 133
+ TD
Sbjct: 340 QRRATD 345
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G N+ + L+ G + + ++A +M G P++ +Y+ L+ + ++A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+IL M PN TY L+ G + + ++M G NKFCY+ LI
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P++ F ++ R R +A F + +K PDV +Y L+ ++ +A
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEA 274
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++ +EMK ++PNV TY ++ A G++ R + + DM +G N + L+
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 125 H 125
H
Sbjct: 335 H 335
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 2 MLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MLD G PN TF++L+ ++ R + NQMK +G PD YNFLI + +N
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 61 SDQAIQILEEMKFMEVKPNVRTY 83
+ A+++L M + + N T+
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTF 398
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 11 DTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEE 70
+TF L+ +R +A + N+M+ G VPD ++ +IS + + + +A +
Sbjct: 187 ETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 71 MKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+K +P+V Y L+ G + + ++M AG+ N + Y+ +I A
Sbjct: 247 LK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
+++TF + R ++++A ++M+ G + + +N ++ T KS+N A ++
Sbjct: 161 SKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF 220
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
++MK +P++++Y LL + L RV+ + R+M G + Y +I AH
Sbjct: 221 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH 277
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
T+++LV RM+DA+ +++M++ G+ P+ Y+ ++ + + S +A ++ +
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT- 397
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA--HKNK 128
M +P V TY ++ RLD I +M G+ ++ LI A H+NK
Sbjct: 398 --MSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
KP+ F SL+ G ++ DA F + K G + YN L+ S+ + A +
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 67 ILEEMKFMEVKPNVRTYICLLH 88
++EM+ V PN RTY +LH
Sbjct: 359 TVDEMRLKGVGPNARTYDIILH 380
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G N +TF+ ++ + S++ +A +M G+ P+V +N +I K+ + A
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 65 IQILEEMKFME---VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
+Q+L +M M V PN TY +++ GRLD I DM +G+ N+ Y L
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
Query: 122 IVAH 125
+ A+
Sbjct: 333 VDAY 336
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMG---LVPDVTLYNFLISTCGK 57
M+ GV PN +F+ ++ G + M+ A L +M +M + P+ YN +I+ K
Sbjct: 244 MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK 303
Query: 58 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 117
+ D A +I +M V N RTY L+ A G D + +MT+ GL +N
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI 363
Query: 118 YAGLI 122
Y ++
Sbjct: 364 YNSIV 368
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 14 HSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 72
+SL++ + + R+++++ L +MK GL PDV+LYN LI C K++ A ++ +EM
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 73 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
K N+ TY L+ + +G + + M G+ ++ Y LI
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLI 509
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ + ++ G +R + DA + MK G P+V Y +I K +
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ AI+ ++M ++P+ Y CL+ +LD V ++++M G + Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 121 LI 122
LI
Sbjct: 444 LI 445
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+ L+ G R + +A N M GL PD+ +N ++ +S+ AI++
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
MK PNVR+Y ++ ++ DM +GL + Y LI
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRM-QDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
M+ G+ P T+H+ MR R ++ F L +M+ MG P V Y LI + +
Sbjct: 399 MLEKGLFPTIRTYHAF----MRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 115
+ D + + +EMK V P++ +YI ++H +G+++ ++M G+ N+
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G++PN TF++L+ G R ++Q+A +MK + + P+ YN LI+ + +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A + E+M ++ ++ TY L+ + + V+++ L N ++
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 121 LIVAH 125
LI+
Sbjct: 419 LIMGQ 423
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
++++L+ G + A N M GL P+V +N LI ++ +A ++ EM
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
K + V PN TY L++ + G + DM G+ + Y LI
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G++PN TF++L+ G R ++Q+A +MK + + P+ YN LI+ + +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A + E+M ++ ++ TY L+ + + V+++ L N ++
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 121 LIVAH 125
LI+
Sbjct: 419 LIMGQ 423
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
++++L+ G + A N M GL P+V +N LI ++ +A ++ EM
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
K + V PN TY L++ + G + DM G+ + Y LI
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +PN T+ +V G + + AF LN+M+ + +V +Y+ +I + K ++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + EM+ V+PNV TY L+ R + ++ DM + N +
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 LIVA 124
LI A
Sbjct: 336 LIDA 339
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T SL+ G G R+ DA ++QM MG PD + LI
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A+ +++ M +PN+ TY +++ G +D ++ M AA + N Y+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 121 LI 122
+I
Sbjct: 266 VI 267
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+++L+ G + R+ + +M GLV + Y LI ++++ D A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
++M V PN+ TY LL +G+L++
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ PN TF++L+ ++ ++ +A ++M + PD+ Y+ LI+ D+A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ E M + PNV TY L++ R+D + R+M+ GL N Y LI
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + P+ T+ SL+ G R+ +A + M P+V YN LI+ K+K
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+ +++ EM + N TY L+H D + + M + G+ N Y
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 121 LI 122
L+
Sbjct: 476 LL 477
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV N T + +V + +M+ FL+Q++ G+ PD+ YN LIS ++A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+++ M P V TY +++ G+ +R + +M +GL + Y L++
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 125 HKNKTPVTD 133
K V +
Sbjct: 350 ACKKGDVVE 358
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +KP +S++ G R D FL +M G VPD YN LI + +N
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 61 SDQAIQILEEMKFME--VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+A ++++M+ + + P+V TY +LH ++ ++R M G+ ++ Y
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 119 AGLIVAHKNKTPVTDDF 135
+I ++ +T+ F
Sbjct: 696 TCMINGFVSQDNLTEAF 712
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV P+ T+++L+ M++AF +N M G P V YN +I+ K ++A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ EM + P+ TY LL G + + DM + + + C++ ++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIM--GLVPDVTLYNFLISTCGKS 58
M+ +G P+ ++++L+ G +R M AF + +M+ GLVPDV YN ++ +
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 59 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+A +L +M V P+ TY C+++ + L I +M G
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G PN TF L+ + M+ A F +M+++GL P V + +I K +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A+++ +E F NV +L G+ D ++ M + G+G N Y
Sbjct: 425 HEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 121 LIVAH 125
+++ H
Sbjct: 484 VMLGH 488
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG++ + T+ +L+ G ++ + A +M+ +GLVPD +Y +++ K
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
+ +++ EEMK V PNV Y ++ +G LD + +M G+
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%)
Query: 12 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 71
+++S++ G + M A +M G+ P+V Y L++ K+ DQA+++ +EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 127
K VK ++ Y L+ ++ +A+ ++ GL ++ Y LI +N
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ GV + T L+ ++R + +A L++ G PD LY+ + C K+ +
Sbjct: 224 MVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLD 283
Query: 61 SDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
A +L EMK ++ P+ TY ++ A G +D + +M + G+ +N
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Query: 120 GLIVAH 125
LI H
Sbjct: 344 SLITGH 349
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
+P T+ L+V + + A ++M GL P V LY L++ +S D A
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 67 ILEEMK-FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
IL++MK F + +P+V TY LL AC + D V+++ ++M
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEM 221
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLV-PDVTLYNFLISTCGKSK 59
M+ +G++P + + +L+ R + + DAF L++MK PDV Y+ L+ C +
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
D + +EM + PN T +L GR D++ ++ DM
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%)
Query: 35 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 94
QMK G++PD + N +I K D+AI++ +EM +PN TY L+ G
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 95 RLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
R+ + ++M G+ N CY LI +
Sbjct: 273 RVGQGLGFYKEMQVKGMVPNGSCYMVLICS 302
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L G +PN T+ LV G R+ F +M++ G+VP+ + Y LI + +
Sbjct: 249 MALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERR 308
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 95
D+A++++ +M + P++ TY +L GR
Sbjct: 309 LDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV+PN ++ + +R +R++ A FL +M+++G+VP+V YN +I
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAA-GLGLNKFCYA 119
++AI++LE+M P+ +Y ++ + R+ V +++ M GL ++ Y
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 120 GLI 122
LI
Sbjct: 388 TLI 390
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ + F ++V R +++DA L M+ G+ P++ + N I ++
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
++A++ LE M+ + + PNV TY C++ R++ ++ DM + G +K Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSY 350
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G PN + +L+ G + ++Q+A +++K GL D Y L++ ++
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+D+A+++L EMK + + TY +L +++GR + ++ + G+ LNK Y
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M++ G +P+ T+ +V G + + A L +M+ + P V +YN +I KN
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A+ + EM ++PNV TY L+ GR + ++ DM + N ++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 121 LIVA 124
LI A
Sbjct: 332 LIDA 335
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T +SL+ G G+R+ DA + QM MG PD +N LI +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A+ +++ M +P++ TY +++ G +D ++++ M + Y
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 121 LIVAHKNKTPVTD 133
+I A N V D
Sbjct: 262 IIDALCNYKNVND 274
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DGV P+ T+ L+ G +++ A ++ + PD+ YN +I K+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ + + VKPNV TY ++ G + +A+ R+M G + Y
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 121 LIVAH 125
LI AH
Sbjct: 577 LIRAH 581
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G +P+ TF++L+ G R +R +A +++M + G PD+ Y +++ K + D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +L++M+ +++P V Y ++ A ++ + +M G+ N Y LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ PN TF +L+ ++ ++ +A ++M + PD+ Y+ LI+ D+A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ E M + PNV TY L+ R+D + R+M+ GL N Y LI
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G PN TF SL+ G + +RM A ++MK M L D+ Y LI K +
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
A + E+ + + PNV Y L+ G++D + + M G+ + F Y
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 121 LI 122
+I
Sbjct: 736 MI 737
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 65/137 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG+ + T+ +++ G ++ + A +++ +G+VPD L+ L++ K
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A ++LEEMK +V PNV Y ++ +G L+ + +M G+ + +
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840
Query: 121 LIVAHKNKTPVTDDFAA 137
L+ K P ++
Sbjct: 841 LVSGRVEKPPAASKISS 857
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ + ++ G +R + DA + MK G P+V Y +I K +
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ AI+ ++M ++P+ Y CL+ +LD V ++++M G + Y
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 121 LI 122
LI
Sbjct: 443 LI 444
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+KP+ + ++ G +R + DA + MK G P+V Y +I K +
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ AI+ ++M ++P+ Y CL+ +LD V ++++M G + Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 121 LI 122
LI
Sbjct: 444 LI 445
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ P+ T+ +++ + ++++ + G PD ++ L G++ +
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D +L+EMK M+VKPNV Y LL A G+ ++ +M AGL N+
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 121 LI 122
L+
Sbjct: 367 LV 368
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ PN T +LV + +DA +MK D LYN L++ C
Sbjct: 352 MLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGL 411
Query: 61 SDQAIQILEEMK-FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 114
++A ++ +MK ++ +P+ +Y +L+ + G+ ++ + +M AG+ +N
Sbjct: 412 EEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G +P+ T+++LV R R+++AFY M +VPD+ Y LI K
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 116
+A Q M +KP+ +Y L++A +G + + ++ +M + ++F
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ PN TF+ L S ++ FL +M+ G PD+ YN L+S+ + +A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ + M V P++ TY L+ DGR+ + M G+ + Y LI A
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 125 H 125
+
Sbjct: 351 Y 351
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G KPN TF LV G + LN M+ G++P+ +YN ++S+ + +D +
Sbjct: 177 GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMT-------------AAGL 111
+++E+M+ + P++ T+ + A +G++ + I DM L
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 112 GLNKFCYAGLI 122
L FC GL+
Sbjct: 297 MLKGFCKVGLL 307
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ P+ +++ L+ G + + DA + MK G+ PD Y L+ D A
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 114
+L+EM PN T LLH+ GR+ ++R M G GL+
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG KPN T++ L+ R + +++A NQM+ G PD Y LI K+
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + + M+ + P+ TY +++ G L + + +M G N +
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 121 LIVAH 125
+I H
Sbjct: 505 MIALH 509
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G K + T+ ++V R + + L++M G P+ YN LI + G++ +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +M+ +P+ TY L+ A G LD + + M AGL + F Y+ +I
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P+ T++SL+ G + + + +A + M G PD+ Y+ LI++ K+K
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D +++ E+ + PN TY L+ G+L+ + ++M + G+ + Y
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 121 LI 122
L+
Sbjct: 461 LL 462
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +P+ T+ L+ + R+ D ++ GL+P+ YN L+ +S
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ +EM V P+V TY LL +G L++ I M + + L Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 121 LIVAHKNKTPVTDDFA 136
+I N + V D ++
Sbjct: 496 IIHGMCNASKVDDAWS 511
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ TF +L+ ++ ++ +A N+M G+ PD YN LI K +A Q+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+ M +P++ TY L+++ R+D + R++++ GL N Y L++
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ DT+ +V + + AF ++ M+ +GL P V +Y+ +I + GK +A +
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+M ++P+ Y+ +++ A +GR+D N +V ++ L + F Y LI
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GV+P + + L+ R + ++ A F + +VPD+ Y +I+T + QA
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNA-----IVRDMTAAGLGLNKFCY 118
+ E+MK +VKP+V TY LL+ +D LD ++ D+ + +N++C+
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLN---SDPELDMKREMEAFDVIPDVVYYTIMINRYCH 710
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N DT+ +++ G + + A L +M++ L P V YN L+S+ K + DQA ++
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
EEM+ P+V ++ ++ G + +++ M+ AGL + F Y+ LI
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M + + P+ ++++++ G G ++ A N+MK G + + LI K+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
D+A+ L+EMKFM ++ ++ Y L+ G LDR A+ ++ G
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 2 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 61
++DG KPN ++++V G ++ M A F +M PDV +N LI+ +S
Sbjct: 186 LIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKF 244
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
D A+ + EMK +PNV ++ L+ + G+++ + +M G
Sbjct: 245 DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G +P+ T+ ++V G + + A L +M+ + DV +YN +I K K+
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A+ + EM ++P+V TY L+ GR + ++ DM + N ++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 LIVA 124
LI A
Sbjct: 334 LIDA 337
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 71
+++++ G + M DA +M G+ PDV Y+ LIS C + SD A ++L +M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-ASRLLSDM 319
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ PNV T+ L+ A +G+L + +M + + F Y+ LI
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++P+ T++ ++ G + +++D + + + G+ P+V YN +IS + + ++A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 112
+L++MK PN TY L+ A DG + ++++M + G
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+ +L+ G + R+++ +M GLV + Y LI ++++ D A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 127
++M + V PN+ TY LL +G+L + + + + + + + Y +I
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 128 KTPVTDDF 135
V D +
Sbjct: 516 AGKVEDGW 523
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N +++ +V + + A L +M+ GL + YN +IS C KS+ S A+ +
Sbjct: 389 NEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVY 448
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVR 104
E M + KPN TY+ L+ +C D V I++
Sbjct: 449 EHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILK 484
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDA-FYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
M G KP+ ++ L+ R R+++A F +M +G+ + + YN +I+
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 60 NSDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGRLDRVNAIVRDM-TAAGLGLNKFC 117
D+AI++L+EM+ + P+V TY LL +C G + V ++++M T L L++
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 118 YAGLI 122
Y LI
Sbjct: 440 YTFLI 444
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 36/156 (23%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI------------- 52
+ PN TF+ + G + +R+++A + + +MK G P V Y +I
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 53 ----------------------STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 90
S+ K ++A+++ MK KP+ Y CL+H
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 91 AADGRLDRVNAIVR-DMTAAGLGLNKFCYAGLIVAH 125
A GRL+ + R +M G+ +N Y +I +
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDA-FYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
M G KP+ ++ L+ R R+++A F +M +G+ + + YN +I+
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 60 NSDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGRLDRVNAIVRDM-TAAGLGLNKFC 117
D+AI++L+EM+ + P+V TY LL +C G + V ++++M T L L++
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 118 YAGLI 122
Y LI
Sbjct: 440 YTFLI 444
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 36/156 (23%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI------------- 52
+ PN TF+ + G + +R+++A + + +MK G P V Y +I
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 53 ----------------------STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 90
S+ K ++A+++ MK KP+ Y CL+H
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 91 AADGRLDRVNAIVR-DMTAAGLGLNKFCYAGLIVAH 125
A GRL+ + R +M G+ +N Y +I +
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N +TF ++ R ++ +A Y N M+ L P++ +N L+S KSKN +A ++
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 110
E M+ P+ +TY LL + L + + R+M AG
Sbjct: 227 ENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS---TCGKSKNS 61
G K + F++++ M+DA L +MK +GL P + YN LI GK + S
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
+ + ++ E ++V PN+RT+ L+ A +++ +V+ M G+ + Y +
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 122 IVAHKNK 128
+ K
Sbjct: 230 ATCYVQK 236
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 58/104 (55%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ +GV+PN T+ +++ G + ++++AF N++ +G+ D LY LI + N
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVR 104
++A +L +M+ ++P++ TY +++ GR+ + + +
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK 406
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 72
+ + + G +G + DA +M G+ DV Y+ LI K N ++A+ +L +M
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 73 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
V+PN+ TY ++ G+L+ + + + G+ +++F Y LI
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+KPN +F ++ G + + L MK G+ V+ YN I + K K
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
S +A +L+ M +KPN TY L+H + + + + M G + CY
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 121 LI 122
LI
Sbjct: 333 LI 334
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G PN +++L+ G + +M+ A +++ +GL PD T Y +I G++ N ++A
Sbjct: 344 GFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
+E+K KPN L++ A G D + DMT G+G G+I+
Sbjct: 404 KHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMT--GIGCQYSSILGIILQ 461
Query: 125 HKNKTPVTD 133
K D
Sbjct: 462 AYEKVGKID 470
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 1 MMLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
MML+ GV+PN T L+ + +++A + + M+ G+V + + Y+ +I+ + +
Sbjct: 235 MMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLR 293
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
D+A ++++ MK V+ + ++ +L+A + G+++ +I+ M AAG N Y
Sbjct: 294 LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 120 GLIVAH 125
LI +
Sbjct: 354 TLITGY 359
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DG + + +++L+ + +M+ L +MK PD YN +I+ G+
Sbjct: 759 MQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGW 818
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+ +L+E+K + P++ +Y L+ A G ++ +V++M + +K Y
Sbjct: 819 IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTN 878
Query: 121 LIVA 124
L+ A
Sbjct: 879 LVTA 882
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM GV P++ T+++LV +L +M+ G V D Y +IS+ K
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ +EM ++P+V Y L++A A G + + + V M AG+ N Y
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 121 LI 122
LI
Sbjct: 651 LI 652
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYN-FLISTC--GKSKNSDQAIQILE 69
FH ++ + +R+++A+ + M+ + DVT YN FL S C G + + ++ +E
Sbjct: 163 FHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKME 222
Query: 70 EMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
E + + P+ RTY L+ GR++ AI+R M GL + +A +I
Sbjct: 223 EEEEGVMSPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVI 275
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ GV N ++ LV + + A L++M+ G+ PD+ YN LIS K
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 106
+A+ + + M+ V PN+ TY +H + +GR+ + R++
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV PN T++S + G R RM++A ++K VT Y LI + +
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVT-YTTLIDGYCRMND 322
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTA 108
D+A+++ E M+ P V TY +L DGR+ N ++ +M+
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 72
F L++ + + D+ Q++ GL P + L+++ K + +D +I ++M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 73 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKT 129
+ V N+ Y L+HAC+ G ++ ++ +M G+ + F Y LI + K+
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G P T+++++ + R + A L+ MK G+ DV YN LI +S
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +L +M+ + PN TY L++ + +G++ + ++ +M + GL N +
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 121 LIVAH 125
LI H
Sbjct: 379 LIDGH 383
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ + P+ TF+ L+ + + Y + +M+ G P + YN ++ K
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
AI++L+ MK V +V TY L+H R+ + ++RDM + N+ Y
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 121 LIVAHKNKTPV 131
LI N+ V
Sbjct: 344 LINGFSNEGKV 354
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+L+G + TF+ LV + ++ +A F+ M G++P+ ++ LI+ G S
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A + +EM + P TY LL G L ++ + A ++ Y
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 121 LIVA 124
L+ A
Sbjct: 659 LLTA 662
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T++ L+ G + +R+ A MK G VP+ YN I +
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333
Query: 61 SDQAIQILEEMKFM-EVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+ AI+++ MK + P TY L+HA R +V +M AGL ++ Y
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGL--VPDVTLYNFLIST---------C 55
KP+ +++++ R + A + L+QM++ G PD Y LIS+ C
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 56 GKS--KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGL 113
K+ + +A ++ EM F P+V TY CL+ C R+ R + DM G
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 114 NKFCYAGLI 122
N+ Y I
Sbjct: 317 NQVTYNSFI 325
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 25 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 84
RM +A +M G VPDV YN LI C K+ +A+++ E+MK PN TY
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 85 CLLHACAADGRLDRVNAIVRDMTAAGLGL 113
+ + ++ ++R M G G+
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
+ PN+D++ ++ + + D+ ++MK GL P + +YN L+ + D+A+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 125
++++++ +KP+ TY ++ G+LD ++ M +
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMIS----------------- 392
Query: 126 KNKTPVTDDFAAKVVAIYF 144
+N +P D F A + A+ F
Sbjct: 393 ENLSPTVDTFHAFLEAVNF 411
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P+ T+ S + G R + AF +M G + Y LI ++K D+A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +L +MK PNVRTY L+ A G+ + + M+ +G+ + Y LI
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSK 59
M +G N ++ L+ G ++ +A L +MK P+V Y LI + CG +
Sbjct: 216 MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQ 275
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
S +A+ + ++M +KP+ Y L+ + + LD + ++ M GL N Y
Sbjct: 276 KS-EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYN 334
Query: 120 GLI 122
LI
Sbjct: 335 ALI 337
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N +++S++ + + DA L++M+I GL PD+ +N L+S S AI +L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAI 102
+ M+ +KP+ + LL A A G L AI
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M +G+KP+ T++SL G + + A + +MK G+ P+V + + S C K+ N
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLL 87
A+++ +M+ V PN T LL
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
KP T+ +L G + +++AF M+ G+ P + +YN LIS K ++ ++
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 114
++ E++ + P V TY L+ G +D+ A +M G+ LN
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAF-YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
PN ++ + G + +++DA F + + +PD Y LI C + + ++A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ +EM + PN+ TY L+ G +DR ++ + G+ N Y LI
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P+ T+ L+ G + AF ++M + G++P++ YN LI K N D+A ++
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
L ++ + PN TY L+ G + + M GL
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G PN TF+ L+ G + + + D +M + G+V D YN LI +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ +EM V+P++ +Y LL +G ++ I + + + L+ Y
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 121 LIVAHKNKTPVTDDF 135
+I N + V D +
Sbjct: 498 IIHGMCNASKVDDAW 512
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
LD VK + ++ G + + +AF N+M+I G D+ +Y LI + D
Sbjct: 245 LDAVK-----YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++L +M ++ P+V + L+ +G+L + ++M G+ + Y LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP+ T++SL+ + ++ A+ +++M+ PDV Y +I G D+A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
++L+EMK P+V Y + RL + +V +M GL N Y
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 36 MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 95
MK GL PDV YN LI K + ++A +++++M+ E P+V TY ++ G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 96 LDRVNAIVRDMTAAG 110
D+ ++++M G
Sbjct: 297 PDKAREVLKEMKEYG 311
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
++P +F++L+ G + + + F +QM+ PDV Y+ LI+ K D A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG---------LNK 115
+ +EM + PN + L+H + +G +D + + M + GL +N
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 116 FCYAGLIVAHKN 127
FC G +VA +N
Sbjct: 390 FCKNGDLVAARN 401
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G++ +R F +LV G + R+ DA L +M G+ PD Y ++ K ++
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 123
++L+EM+ P+V TY LL+ G++ + ++ M G+ + Y L+
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Query: 124 AH 125
H
Sbjct: 564 GH 565
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G P T+ L+ G + R+ +A+ F M GL PDV N L++ GK ++
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 65 IQILEEMKFMEVKPNVRTYICLLHAC-AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ EM P V +Y ++ A + + V++ M A + ++F Y+ LI
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 65/137 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G P+ +++L+ G ++ + +A L +M+ G D+ +N +++ ++
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+AI++ E +K +KP+ TY LL A G + ++R+M G + Y+
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 121 LIVAHKNKTPVTDDFAA 137
++ A N DD ++
Sbjct: 625 ILDAVGNVDHEKDDVSS 641
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M D V P+ T+ L+ G + +R++ A L +M G P Y LI+ GK+K
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A ++ +E+K + R Y ++ G+L + +M G G + + Y
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 121 LI 122
L+
Sbjct: 520 LM 521
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMG-LVPDVTLYNFLISTCGKSKNSDQAI 65
KP T++S+++ M+ + + +M G PD Y+ LIS+ K +D AI
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
++ +EMK ++P + Y LL G++++ + +M AG + Y LI
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DGV P+ T+ L+ G + +++ A ++ + PD+ YN +I K+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ + + VKPNV Y ++ G + +A+ R+M G N Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 121 LIVAH 125
LI A
Sbjct: 576 LIRAR 580
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G +P+ T SL+ G G R+ +A ++QM +M P+ +N LI
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A+ +++ M +P++ TY +++ G +D ++++ M + + Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 121 LIVAHKNKTPVTD 133
+I A N V D
Sbjct: 261 IIDALCNYKNVND 273
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T+++L+ G + R+++ +M GLV + YN LI ++ + D A +I
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
++M V P++ TY LL G+L++
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M DGV N+ T+ L+ +++ +M DA ++M+ G+ DV +Y LIS + N
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+A + +E+ + P+ TY L+ G + ++ +M + G+ + + +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 121 LIVAHKNKTPVTD 133
LI + K V +
Sbjct: 405 LIDGYCRKGMVDE 417
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M GV+PN T++ ++ + ++++A M+ G+ PD Y LI + N
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A+++ EM + N TY ++ + G+ D + +M G ++ Y
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 121 LI 122
LI
Sbjct: 615 LI 616
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK-IMGLVPDVTLYNFLISTCGKSK 59
M+ +G+KP D + SL+ + + AF L MK + PDV + LIS C K
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
D I+ EM ++ V + TY ++ G + + +++ DM G L C
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 120 GLIVA 124
I+
Sbjct: 290 NSIIG 294
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 1 MMLDGVK-PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
M+ DG P+ T +S++ G M+ + ++ ++MG+ PD+T +N LI + GK+
Sbjct: 276 MIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAG 335
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 119
+ +++ M+ TY ++ GR+++++ + R M G+ N Y
Sbjct: 336 MYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYC 395
Query: 120 GLIVAH 125
L+ A+
Sbjct: 396 SLVNAY 401
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+ PN T + LV + + ++ A+ L+++ MGLVP++ Y ++ + + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 124
++LEEM P+ TY L+ GR ++ DM + N+ Y +I A
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQA 64
VKP+ +F L+ +++A Y ++++ G PD LYN ++ C SK S +A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS-EA 284
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + ++MK V+P+ TY L+ + GR++ ++ M AG + Y L+
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 16 LVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFME 75
++ G + R+ +A NQMK GL PD+ Y+ +I K D A+ + +EM
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 76 VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+ PN RT+ LL G L +++ + ++G L+ Y
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ------------MKIMGLVPDVTLY 48
M +G+ P T+ + G RG + ++ + L + M+ G+ PD Y
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 49 NFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTA 108
N +I + K+ A LE MK + + TY L+ + G + + ++ + +
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 109 AGLGLNKFCYAGLIVAH 125
+ L+KF Y LI AH
Sbjct: 684 QNVSLSKFAYTTLIKAH 700
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI---STCGKSKNS 61
G+ P+ TF+SL+ G + + +A L+ +K+ GL P V Y L+ + CG +K+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAI------------VRDMTAA 109
D ++ EMK + P TY + + + N + +RDM +
Sbjct: 558 D---ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 110 GLGLNKFCYAGLI 122
G+ ++ Y +I
Sbjct: 615 GIPPDQITYNTII 627
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 16 LVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFME 75
++ G + R+ +A NQMK GL PD+ Y+ +I K D A+ + +EM
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 76 VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
+ PN RT+ LL G L +++ + ++G L+ Y
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ------------MKIMGLVPDVTLY 48
M +G+ P T+ + G RG + ++ + L + M+ G+ PD Y
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 49 NFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTA 108
N +I + K+ A LE MK + + TY L+ + G + + ++ + +
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 109 AGLGLNKFCYAGLIVAH 125
+ L+KF Y LI AH
Sbjct: 684 QNVSLSKFAYTTLIKAH 700
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI---STCGKSKNS 61
G+ P+ TF+SL+ G + + +A L+ +K+ GL P V Y L+ + CG +K+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAI------------VRDMTAA 109
D ++ EMK + P TY + + + N + +RDM +
Sbjct: 558 D---ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 110 GLGLNKFCYAGLI 122
G+ ++ Y +I
Sbjct: 615 GIPPDQITYNTII 627
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M++ G +P+ T+ +++ G + A LN+M+ + DV +YN +I K K+
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D A + +M+ +KP+V TY L+ GR + ++ DM + + +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 121 LIVA 124
LI A
Sbjct: 326 LIDA 329
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 71
+++++ G + M DAF N+M+ G+ PDV YN LIS C + SD A ++L +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD-ASRLLSDM 311
Query: 72 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ P++ + L+ A +G+L + +M + K C+ ++
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS-----KHCFPDVV 357
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G P+ T +SL+ G G+R+ +A ++QM MG PD + L+ +
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 97
+ +A+ ++E M +P++ TY +++ G D
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 34 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 93
+QM+ + PDV Y LI G+++ ++A+ + EEM V+P + Y LL A A
Sbjct: 303 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 94 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKT 129
G +++ + + M + + + Y ++ A+ N +
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNAS 398
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 34 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 93
+QM+ + PDV Y LI G+++ ++A+ + EEM V+P + Y LL A A
Sbjct: 310 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 94 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKT 129
G +++ + + M + + + Y ++ A+ N +
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNAS 405
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%)
Query: 4 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 63
+G P+ +H L+ + R +A N+M GL P V YN +I K D+
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 64 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + M E P+V TY L+H A GR +M N+ + LI
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALI 726
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 6 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 65
++ N T+ L+ G ++ SR+ AF +M+ MG+ D+ LY+ LI K K+ + A+
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 66 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIV 103
+ E+K + P+ LL + + + L R+ ++
Sbjct: 339 SLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI 376
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 52/91 (57%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L+GV PN T++ +++ +R ++ +A QM+ G++P++ + +++ ++
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACA 91
S++AI L +M+ ++PN + L ACA
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACA 557
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%)
Query: 3 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 62
+ G K + T+ +++ R+Q + + MK G++ D Y LI S + D
Sbjct: 115 IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVD 174
Query: 63 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
A+++ EEM+ +P V +Y + ADGR++ + ++M + + N Y L+
Sbjct: 175 GAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLM 234
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G PN T+ SL+ G + + +AF L++++ GL PD+ L N +I T +
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
++A ++ ++ ++ P+ T+ +L + G+ D V I G+G + G
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH-----GIGTDFDLVTG 387
Query: 121 LIVAHKNKTPVTDDFAAKVVAI 142
++++ + +A KV++I
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSI 409
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 13 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 72
F++++ G S+ +A + MK++G+ PDV +N LIS +N ++ +ILE M
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 73 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
KP+V ++ ++ + + ++ + M GL
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGL 284
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G P+ ++L+ G + RM +AF L + G V + Y+ LI +++
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
QA ++ M +KP++ Y L+ + G+++ ++ M + G+ + +CY
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 121 LIVA 124
+I A
Sbjct: 379 VIKA 382
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG +PN T++ L+ R + + +A NQM+ G PD Y LI K+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
D A+ + + M+ + P+ TY +++ G L + + +M G N Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G K + T+ ++V R + L++M G P+ YN LI + G++ ++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +M+ KP+ TY L+ A G LD + + M A GL + F Y+ +I
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG +PN T++ L+ R + + +A NQM+ G PD Y LI K+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
D A+ + + M+ + P+ TY +++ G L + + +M G N Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G K + T+ ++V R + L++M G P+ YN LI + G++ ++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +M+ KP+ TY L+ A G LD + + M A GL + F Y+ +I
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ DG +PN T++ L+ R + + +A NQM+ G PD Y LI K+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 118
D A+ + + M+ + P+ TY +++ G L + + +M G N Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G K + T+ ++V R + L++M G P+ YN LI + G++ ++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+ + +M+ KP+ TY L+ A G LD + + M A GL + F Y+ +I
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ T+ ++ G ++ +A+ FL++M G PD+ YN + +++
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 61 SDQAIQILEEMKFMEVKPNVRTY 83
+D+A+++ M P+V+TY
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTY 449
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
P TF ++V + + ++ F + +M G +PDV+ Y +I ++ D+A +
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDR 98
L+EM P++ TY C L + + D
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDE 429
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 4/130 (3%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M G+ N T+ SL+ +R A L+QM +GL PD Y ++ KS N
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN----KF 116
D+A + +M E+ P+ +Y L+ GR+ + DM + KF
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 117 CYAGLIVAHK 126
GLI K
Sbjct: 471 IIGGLIRGKK 480
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 60/125 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M D V+P+ + ++ G + A +++ ++GL PDV YN I+ K +
Sbjct: 277 MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND 336
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ A++++ M + +PNV TY L+ A G L R + ++M G+ N +
Sbjct: 337 IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Query: 121 LIVAH 125
+I A+
Sbjct: 397 MISAY 401
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 4 DGVKPNRDTFHSLV----VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 59
G PN T H L+ + RGS Q +N+MK++G PD N+L+S+
Sbjct: 129 SGCLPNPQT-HLLLSDAWLERRRGS--QSVADIINEMKLIGYSPDTGTCNYLVSSLCAVD 185
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHA-CAADGRLDRVNAIVRDMTAAGLGLNK 115
D+AI+++EEM P+V +Y ++++ C A D V + ++ AG+ K
Sbjct: 186 KLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRK 242
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 27 QDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICL 86
++A + M+ + L PD + +++ C + ++I EMK +VKPNV+ + CL
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCL 416
Query: 87 LHACAADGRLDRVNAIVRDM 106
+H G+L +V++M
Sbjct: 417 IHLLGRSGKLKEAYRLVKEM 436
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+ ++ L+ G R R+ D+ + +K G VPD +YN +I +++
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
D++++ M E +PN+ TY L+ ++ I +M + G+
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G++P+ T+ SL+ R DA L+ M + P+V +N LI K +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAI---------VRDMTAAGLGLNK 115
++ +EM + PN+ TY L++ RLD I + D+ +N
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 116 FCYAGLIV 123
FC A +V
Sbjct: 390 FCKAKKVV 397
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
MM G P+ T +SL+ G G+R+ +A ++QM MG PD + L+ +
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
+ +A+ ++E M +P++ TY +++ G D ++ M + + Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 121 LI 122
+I
Sbjct: 246 VI 247
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T++ L+ G R +++ A +++MK + P+V N ++ + + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+M+ VK NV TY+ L+HAC + +++ M AG + Y LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLV-PDVTLYNFLISTCGKSK 59
M DG+ P T+ +++ + +A M + V P+ +YN LI+ K
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICL 86
N QA+ + EEMK V+PNV TY L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T++ L+ G R +++ A +++MK + P+V N ++ + + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+M+ VK NV TY+ L+HAC + +++ M AG + Y LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLV-PDVTLYNFLISTCGKSK 59
M DG+ P T+ +++ + +A M + V P+ +YN LI+ K
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICL 86
N QA+ + EEMK V+PNV TY L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
KP+ +F+SL G + + + F ++ M + P+V Y+ I T KS A++
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
MK + PNV T+ CL+ G L+ ++ ++M + LN Y LI
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 8 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 67
PN T++ L+ G R +++ A +++MK + P+V N ++ + + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
+M+ VK NV TY+ L+HAC + +++ M AG + Y LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLV-PDVTLYNFLISTCGKSK 59
M DG+ P T+ +++ + +A M + V P+ +YN LI+ K
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICL 86
N QA+ + EEMK V+PNV TY L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 35/157 (22%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIM--------------------- 39
M+ G+ PN T+++++ G R +++ A+ F +MK
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 40 --------------GLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 85
G++P V YN +I K N + A+ + EEM +PNV TY
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 86 LLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
L+ G R +++ M G N Y +I
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMG---LVPDVTLYNFLISTCGKSKNS 61
G +P+ +T+ L+ + +R+ + +++MK G L+ Y FL CG +
Sbjct: 352 GCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER-L 410
Query: 62 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 114
+ A+ + + MK KP ++TY L+ A+ +L R N + ++ G+ ++
Sbjct: 411 EHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVS 463
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ ++PN TF L+ G +A + M+ G P + Y L+S GK
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
D+A +L EMK +KP+V Y L++ + R+ ++ +M G N Y
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 121 LI 122
+I
Sbjct: 367 MI 368
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 9 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 68
N TF+ +V G G + ++A QM PD +N L++ ++ +A ++
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 69 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 121
EM+ VKP+ TY L+ C +G++D A + M + L N Y L
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
GVK + ++++ G R + +A +N+M LVPD Y+ +I K ++ A
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 122
I+I M+ + KPNV TY L++ G ++M L N Y LI
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 7 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 66
KP+ T++ L+ + + + A FL++ GL+P+ Y LI KSK D A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 67 ILEEMKFMEVKPNVRTYICLLHACAADGRLD 97
+L +M KP++ TY L+H G +D
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G P+R ++ +L+ R +++++A+ L +MK+ G PD+ YN +I +
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 112
+ A ++L++M PN +Y L+ G D + +M + G
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M L G P+ T+++++ + A F G P + Y L+ +
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
S +AI++LE+M P++ TY L++ G L+ V ++++ + + GL LN Y
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 121 LI 122
L+
Sbjct: 320 LL 321
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 46.6 bits (109), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
G+KP R +++++V + S A M G P V Y L+S K K D+A
Sbjct: 453 GLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEA 512
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 111
++ M + ++PN+ Y + + + ++ ++++M + G+
Sbjct: 513 FRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK-IMGLVPDVTLYNFLISTCGKSK 59
M G KPN T ++ ++D +Y+ MK + G+ P Y +I GK+
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 60 NSDQAIQILEEMKFMEVKPNVRTYICLLHAC 90
D A+++L E ME +P+ T+ LL AC
Sbjct: 410 KLDDAVKLLNE---MECEPDAVTWRTLLGAC 437
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%)
Query: 5 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 64
V N T+++++ G + R N+M G+ PD+ Y +I + G+S N ++
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 65 IQILEEMKFMEVKPNVRTYICLLHACAADG 94
+++ +EMK +++P+V Y L+ G
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALIDCLKKSG 332
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 5 GVKPNRDTFHSLV-------VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 57
G+ P+ F+SL+ V + +A + +M+ + P YN L+S G+
Sbjct: 238 GITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGR 297
Query: 58 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 117
++ ++ QILE+MK P+ +Y ++ GR + N IV +M G +
Sbjct: 298 TRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKF 357
Query: 118 YAGLI 122
Y LI
Sbjct: 358 YYDLI 362
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P TF+ LV G + M A +M G PDV + LI +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
Q ++ EEM + PN TY L++A + RL + ++ + + + F Y
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY-- 420
Query: 121 LIVAHKNKTPVTDDF--AAKV 139
PV D F A KV
Sbjct: 421 --------NPVIDGFCKAGKV 433
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 1 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 60
M+ G+ P TF+ LV G + M A +M G PDV + LI +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 120
Q ++ EEM + PN TY L++A + RL + ++ + + + F Y
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY-- 420
Query: 121 LIVAHKNKTPVTDDF--AAKV 139
PV D F A KV
Sbjct: 421 --------NPVIDGFCKAGKV 433