Miyakogusa Predicted Gene

Lj0g3v0020549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020549.1 tr|Q0INP5|Q0INP5_ORYSJ Os12g0416500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os12g04165,55.06,4e-19,SUBFAMILY NOT NAMED,NULL; GCN5-RELATED,NULL;
GCN5L1,GCN5-like 1,NODE_60627_length_875_cov_17.096001.path1.1
         (135 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30330.1 | Symbols: BLOS1 | GCN5L1 family protein | chr2:1292...   156   4e-39

>AT2G30330.1 | Symbols: BLOS1 | GCN5L1 family protein |
           chr2:12929045-12929688 REVERSE LENGTH=152
          Length = 152

 Score =  156 bits (394), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 93/114 (81%)

Query: 22  LLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVNGGVQDSFVNQKRIEHEIRALA 81
           L+  +   SL L   TE+++K+A+R A R +DLLV+AVNGGV++ FVN+KRIE EIR LA
Sbjct: 37  LIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLA 96

Query: 82  VTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEYDCKSITTAIQNIHQE 135
           +T+ +F KQTDQWLA TH++N+A+KEIGDFENWMK ME+DCK IT AI+NIH++
Sbjct: 97  ITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150