Miyakogusa Predicted Gene
- Lj6g3v2193500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2193500.1 Non Chatacterized Hit- tr|F6H6F9|F6H6F9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.71,1e-18,seg,NULL; DNAJ_2,Heat shock protein DnaJ, N-terminal;
Chaperone J-domain,Heat shock protein DnaJ, N-,CUFF.60873.1
(1489 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73621 weakly similar to UniRef100_A7QVW0 Cluster: Chr... 874 0.0
gnl|LJGI|FS349575 similar to UniRef100_A7QVW0 Cluster: Chromosom... 795 0.0
gnl|LJGI|TC79588 weakly similar to UniRef100_A7QVW0 Cluster: Chr... 190 2e-47
gnl|LJGI|BP029517 similar to UniRef100_A7QVW0 Cluster: Chromosom... 170 2e-41
>gnl|LJGI|TC73621 weakly similar to UniRef100_A7QVW0 Cluster: Chromosome undetermined
scaffold_193, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_193,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 788
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 atggagggtggttacggcggcaaccgggcggaagcggagcggtggctctacaccgcgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atggagggtggttacggcggcaaccgggcggaagcggagcggtggctctacaccgcgaac 92
Query: 61 aagctcctcagcgcgcgtgacctacacggcgcccgctccttcgcgatccgggctcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aagctcctcagcgcgcgtgacctacacggcgcccgctccttcgcgatccgggctcaggaa 152
Query: 121 tccgacccgaggttcgaggccacggagctcctcctcgccgtcatcgacaccctcctcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tccgacccgaggttcgaggccacggagctcctcctcgccgtcatcgacaccctcctcgcc 212
Query: 181 ggcgaagctcggatcaaggacctcgtcgactgctacgccatcctccaagtcgtccgctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ggcgaagctcggatcaaggacctcgtcgactgctacgccatcctccaagtcgtccgctac 272
Query: 241 actgacaacattgagttcatcgccgcccagtaccgccgtctcgccagcctccttgaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 actgacaacattgagttcatcgccgcccagtaccgccgtctcgccagcctccttgaccct 332
Query: 301 caccacaacccattcgccttcgccgcgcatgctttctcccttgtccaagacgcatgggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caccacaacccattcgccttcgccgcgcatgctttctcccttgtccaagacgcatgggct 392
Query: 361 ctcctattcaacccgactaagaaagcattctacgataaccagctccgattcatcactgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctcctattcaacccgactaagaaagcattctacgataaccagctccgattcatcactgaa 452
Query: 421 ccaccgcaacctcatcatgct 441
|||||||||||||||||||||
Sbjct: 453 ccaccgcaacctcatcatgct 473
Score = 571 bits (288), Expect = e-162
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 469 tctattcatctacaccccgttcagaaccatgtaaaccctagctccgatgatgttccggtg 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctattcatctacaccccgttcagaaccatgtaaaccctagctccgatgatgttccggtg 560
Query: 529 gtggttgctgatgctgtggaagaagacaacaggccgagtcaggacaatgtaactgagccg 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggttgctgatgctgtggaagaagacaacaggccgagtcaggacaatgtaactgagccg 620
Query: 589 actcagccgagtgagaacgatgggaggactttctggacggcgtgtccttactgttatgct 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actcagccgagtgagaacgatgggaggactttctggacggcgtgtccttactgttatgct 680
Query: 649 atgtttgagtacccttcggtgtatgaggagtgtactcttcggtgccagagttgtcggagg 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgtttgagtacccttcggtgtatgaggagtgtactcttcggtgccagagttgtcggagg 740
Query: 709 ggttttcatggggtggcggtacggtctctgccgccgggtttgactgag 756
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggttttcatggggtggcggtacggtctctgccgccgggtttgactgag 788
>gnl|LJGI|FS349575 similar to UniRef100_A7QVW0 Cluster: Chromosome undetermined
scaffold_193, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_193, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 576
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Minus
Query: 1089 tggtgttaaaagcaatgggaaggctaggaaggggaatcataatgatagtggggctggtga 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tggtgttaaaagcaatgggaaggctaggaaggggaatcataatgatagtggggctggtga 517
Query: 1149 tgccaatgccaatgccagtgtgggtaatggtgaggtttctggtggtgcctctgcgctgcc 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgccaatgccaatgccagtgtgggtaatggtgaggtttctggtggtgcctctgcgctgcc 457
Query: 1209 gcctgcggttcccaattctgtgaggccggagtctagcaagagaggcgctttgggtggttc 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gcctgcggttcccaattctgtgaggccggagtctagcaagagaggcgctttgggtggttc 397
Query: 1269 gaggaggaggggtgctgggaacttgggcaagttggatttgaatgtggagtttagcaatga 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaggaggaggggtgctgggaacttgggcaagttggatttgaatgtggagtttagcaatga 337
Query: 1329 ggtggaagagcctgcccatggagtcagggaagggaatgggactggacatgcagaggataa 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggtggaagagcctgcccatggagtcagggaagggaatgggactggacatgcagaggataa 277
Query: 1389 tattgaggggattggattttttgaggggcttgatgagttcatccttagtagcttgcccat 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tattgaggggattggattttttgaggggcttgatgagttcatccttagtagcttgcccat 217
Query: 1449 tctcaatgttgttgcagatgataaggttaagggtcattagt 1489
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tctcaatgttgttgcagatgataaggttaagggtcattagt 176
>gnl|LJGI|TC79588 weakly similar to UniRef100_A7QVW0 Cluster: Chromosome undetermined
scaffold_193, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_193,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 656
Score = 190 bits (96), Expect = 2e-47
Identities = 248/298 (83%), Gaps = 3/298 (1%)
Strand = Plus / Plus
Query: 31 gaagcggagcggtggctctacaccgcgaacaagctcctcagcgcgcgtgacctacacggc 90
||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 243 gaagcagaacggtggctctacaccgccaacaagctcctcagcgcacgtgacctgcacggg 302
Query: 91 gcccgctccttcgcgatccgggctcaggaatccgacccgaggttcgaggccacggagctc 150
|| ||||||||||||||||| || | ||||||||||||| ||| || ||| | |||||
Sbjct: 303 gcacgctccttcgcgatccgcgcccgtgaatccgacccgacgtttgacgcctcagagctt 362
Query: 151 ctcctcgccgtcatcgacaccctcctcgccggcgaagctcggatcaagg---acctcgtc 207
|| ||| ||||||||||||| |||||||||||||| | |||||||| | ||| | |
Sbjct: 363 cttctcaccgtcatcgacactctcctcgccggcgagtcacggatcaacgaccaccaccgc 422
Query: 208 gactgctacgccatcctccaagtcgtccgctacactgacaacattgagttcatcgccgcc 267
||||| |||| ||||||||| || |||||||||| |||||| || ||||||||||
Sbjct: 423 gactggtacgggatcctccaaatcctccgctacaccaccaacatcgaccacatcgccgcc 482
Query: 268 cagtaccgccgtctcgccagcctccttgaccctcaccacaacccattcgccttcgccg 325
||||||||||||||||| |||||| |||||||| | ||||| |||||||||||||
Sbjct: 483 cagtaccgccgtctcgcactcctcctcgaccctcatcggaaccccttcgccttcgccg 540
>gnl|LJGI|BP029517 similar to UniRef100_A7QVW0 Cluster: Chromosome undetermined
scaffold_193, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_193, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 446
Score = 170 bits (86), Expect = 2e-41
Identities = 216/259 (83%), Gaps = 9/259 (3%)
Strand = Plus / Minus
Query: 1236 ggagtctagcaagagaggcgctttgggtggttcgaggaggaggggtgctgggaacttggg 1295
||||||||| |||| || || |||||| |||| |||||||||||||| |||||||||||
Sbjct: 404 ggagtctagtaagaaagctgcattgggtagttccaggaggaggggtgcagggaacttggg 345
Query: 1296 caagttggatttgaatgtggagtttagcaatgaggtggaagagcctgcccatggagt--- 1352
||||| ||||||||||||||||| |||||||| ||||||||| ||| ||||||
Sbjct: 344 gaagttagatttgaatgtggagttcagcaatgatccagaagagccttcccgtggagtgcg 285
Query: 1353 ---cagggaagggaatgggactggacatgcagaggataatattgaggggattggattttt 1409
| |||||||||||| ||||| |||| |||||||||||||| ||||| || |||||
Sbjct: 284 tgaccgggaagggaatgcaactggcaatgctgaggataatattgaagggatcgggttttt 225
Query: 1410 tgaggggcttgatgagttcatccttagtagcttgcccattctcaatgttgttgcagatga 1469
|||||| || ||||||||| |||| |||||| || ||||| |||||||| ||||||||
Sbjct: 224 tgagggtctagatgagttc---cttaatagcttacctattctgaatgttgtagcagatga 168
Query: 1470 taaggttaagggtcattag 1488
|||||||||| ||||||||
Sbjct: 167 taaggttaagagtcattag 149