Miyakogusa Predicted Gene

Lj6g3v1887980.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1887980.1 tr|G7JX91|G7JX91_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_5g057710 PE=4
SV=1,36.89,0.000002,seg,NULL; F_box_assoc_1: F-box protein interaction
domain,F-box associated interaction domain,CUFF.60104.1
         (787 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP071391                                                     389   e-107
gnl|LJGI|DC595381 weakly similar to UniRef100_Q2HS67 Cluster: Cy...   153   2e-36
gnl|LJGI|GO011373 similar to UniRef100_A5GKE2 Cluster: Permease ...    62   6e-09
gnl|LJGI|BP079620 similar to UniRef100_A7Q9Q0 Cluster: Chromosom...    60   2e-08
gnl|LJGI|AV777665 similar to UniRef100_Q2HWB4 Cluster: Cyclin-li...    54   1e-06

>gnl|LJGI|BP071391 
          Length = 416

 Score =  389 bits (196), Expect = e-107
 Identities = 199/200 (99%)
 Strand = Plus / Minus

                                                                       
Query: 588 taatccgttgtgtaccagcgtgctttattatgtatatgaggatgatgaagtggtcgtcat 647
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 416 taatccgttgtgtaccagcgtgctttattatgtatacgaggatgatgaagtggtcgtcat 357

                                                                       
Query: 648 gtccaagacaggtgcgattgtttataattacataaatggcacttctaggagtcctgatac 707
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtccaagacaggtgcgattgtttataattacataaatggcacttctaggagtcctgatac 297

                                                                       
Query: 708 tgaatacagcacaaaaatttcggaggggatggtcccataccgctacattgagagtttgat 767
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgaatacagcacaaaaatttcggaggggatggtcccataccgctacattgagagtttgat 237

                               
Query: 768 atcaccctgtctttcataat 787
           ||||||||||||||||||||
Sbjct: 236 atcaccctgtctttcataat 217


>gnl|LJGI|DC595381 weakly similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box;
           F-box protein interaction domain; n=1; Medicago
           truncatula|Rep: Cyclin-like F-box; F-box protein
           interaction domain - Medicago truncatula (Barrel medic),
           partial (9%)
          Length = 408

 Score =  153 bits (77), Expect = 2e-36
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcgcctcgaccaacctctcaacaatccataccaagactccgtcgttgttgcctcttgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atgcgcctcgaccaacctctcaacaatccataccaagactccgtcgttgttgcctcttgc 391

                            
Query: 61  gacggcatgctctgtat 77
           |||||||||||||||||
Sbjct: 392 gacggcatgctctgtat 408


>gnl|LJGI|GO011373 similar to UniRef100_A5GKE2 Cluster: Permease of the
           drug/metabolite transporter (DMT) superfamily; n=1;
           Synechococcus sp. WH 7803|Rep: Permease of the
           drug/metabolite transporter (DMT) superfamily -
           Synechococcus sp. (strain WH7803), partial (7%)
          Length = 738

 Score = 61.9 bits (31), Expect = 6e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 517 gatgtttgggttatgaatgaatatggaaataaagagtcttggaccaa 563
           ||||||||| ||||||| || ||||||||||||||||| ||||||||
Sbjct: 427 gatgtttggcttatgaaggagtatggaaataaagagtcctggaccaa 473


>gnl|LJGI|BP079620 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_67, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 355

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 517 gatgtttgggttatgaatgaatatggaaataaagagtcttggaccaagttgttc 570
           ||||||||||||||||| || ||||||||||| ||||| ||||| || ||||||
Sbjct: 351 gatgtttgggttatgaaggagtatggaaataatgagtcatggactaaattgttc 298


>gnl|LJGI|AV777665 similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box; F-box
           protein interaction domain; n=1; Medicago
           truncatula|Rep: Cyclin-like F-box; F-box protein
           interaction domain - Medicago truncatula (Barrel medic),
           partial (7%)
          Length = 396

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 523 tgggttatgaatgaatatggaaataaagagtcttggaccaagttgttcagagttc 577
           ||||||||||| ||||||||||||  |||||||||||| ||  |||||| |||||
Sbjct: 175 tgggttatgaaagaatatggaaatcgagagtcttggactaaactgttcaaagttc 229