Miyakogusa Predicted Gene
- Lj6g3v1752990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1752990.1 Non Chatacterized Hit- tr|G7IP95|G7IP95_MEDTR
RNA-binding protein, putative OS=Medicago truncatula
G,79.63,0,seg,NULL; RRM_1,RNA recognition motif domain; no
description,Nucleotide-binding, alpha-beta plait;
R,NODE_13005_length_1565_cov_297.072845.path2.1
(1431 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58641 similar to UniRef100_A7R1X0 Cluster: Chromosome... 2827 0.0
gnl|LJGI|FS339207 similar to UniRef100_A7R1X0 Cluster: Chromosom... 904 0.0
gnl|LJGI|TC64666 similar to UniRef100_A7R1X0 Cluster: Chromosome... 70 4e-11
gnl|LJGI|TC62255 similar to UniRef100_A7R1X0 Cluster: Chromosome... 70 4e-11
>gnl|LJGI|TC58641 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined
scaffold_383, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_383, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(58%)
Length = 2146
Score = 2827 bits (1426), Expect = 0.0
Identities = 1429/1430 (99%)
Strand = Plus / Plus
Query: 1 atggaaatggaccctggcaagcttttcattggtgggatttcctgggacacaaatgaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggaaatggaccctggcaagcttttcattggtgggatttcctgggacacaaatgaagaa 186
Query: 61 cgactcagacagtatttccagaactttggagatgtggttgaagctgtgataatgaaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgactcagacagtatttccagaactttggagatgtggttgaagctgtgataatgaaggat 246
Query: 121 cgcaccacggggcgtgcccgtggttttggatttgttgtttttgccgatccttctgttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cgcaccacggggcgtgcccgtggttttggatttgttgtttttgccgatccttctgttgct 306
Query: 181 gagcgagttgttatggaaaagcatgtcattgatggtagaactgtggaagcaaaaaaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gagcgagttgttatggaaaagcatgtcattgatggtagaactgtggaagcaaaaaaggct 366
Query: 241 gtccctagagatgatcagaatgttctgagcagaagcaacagcagcagtcatgggtcgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtccctagagatgatcagaatgttctgagcagaagcaacagcagcagtcatgggtcgcca 426
Query: 301 gttccttctcctgtccgcacaaagaagatatttgttggaggtctaccatccacaattact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gttccttctcctgtccgcacaaagaagatatttgttggaggtctaccatccacaattact 486
Query: 361 gagagtgattttaagaactactttgatcagtttggaacaattacagatgttgtcgtgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gagagtgattttaagaactactttgatcagtttggaacaattacagatgttgtcgtgatg 546
Query: 421 tatgaccataacacacaaaggcctagaggttttggattcataacctttgattctgaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tatgaccataacacacaaaggcctagaggttttggattcataacctttgattctgaggaa 606
Query: 481 ggagttgagaaagttctgtacaaaacttttcatgaactgaatggtaaaatggttgaggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggagttgagaaagttctgtacaaaacttttcatgaactgaatggtaaaatggttgaggtt 666
Query: 541 aagagagctgttcccaaggaattatctccaagtccaagtagaggccagttaggtggatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aagagagctgttcccaaggaattatctccaagtccaagtagaggccagttaggtggatat 726
Query: 601 agttatgctatgagtagagttggtagctttgctaatggtttcactcagggatataatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agttatgctatgagtagagttggtagctttgctaatggtttcactcagggatataatcca 786
Query: 661 ggcatggttggaggccatggacttagaatagatggtcggttgagtccggttactgttggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ggcatggttggaggccatggacttagaatagatggtcggttgagtccggttactgttggt 846
Query: 721 cgtagcggatatcctcttttgagtcctaattatgggtcagaactcaactttgagctacca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cgtagcggatatcctcttttgagtcctaattatgggtcagaactcaactttgagctacca 906
Query: 781 ttgagccaaaatgaaagtgcaaactttacatctaacttcgtcataggacgggcgctgaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ttgagccaaaatgaaagtgcaaactttacatctaacttcgtcataggacgggcgctgaac 966
Query: 841 tcttcatacaatggaagtccgagcaggtacaataatgccatggggtatgctggttcaagc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 tcttcatacaatggaagtccgagcaggtacaataatgccatggggtatgctggttcaagc 1026
Query: 901 attggcaacaatgcaaccataagttcaagttcaataaatcaaaatttgtgggggaatggg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 attggcaacaatgcaaccataagttcaagttcaataaatcaaaatttgtgggggaatggg 1086
Query: 961 aatctttatggtgctactaaccctgcaacctctaatgcttttgttggttatggaagtgaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 aatctttatggtgctactaaccctgcaacctctaatgcttttgttggttatggaagtgaa 1146
Query: 1021 aattcaagcatgggttctcttggtggtattggatcactttggagttcctcccttggtaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 aattcaagcatgggttctcttggtggtattggatcactttggagttcctcccttggtaat 1206
Query: 1081 aatcaagctggaactattggctctggatatggtaagggaagtcttagttataggtccgga 1140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1207 aatcaagctggaactattggctctggatatggtaagggaagtcttagttataggtccgca 1266
Query: 1141 gatgtgattttagggtcaaaaacagtagattatggaagaagcagtgaaagcactgttgca 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 gatgtgattttagggtcaaaaacagtagattatggaagaagcagtgaaagcactgttgca 1326
Query: 1201 tcagctccattgtatactttatcaaatggaaattatgatgaggcattcaaagatacttat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 tcagctccattgtatactttatcaaatggaaattatgatgaggcattcaaagatacttat 1386
Query: 1261 gaagctgggccattttatcgtgaccagacttggaggtcatcagcttcagaactagacgat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 gaagctgggccattttatcgtgaccagacttggaggtcatcagcttcagaactagacgat 1446
Query: 1321 tctggcagtcttggtttgggttttgaaaatgctgtttcagatttaatgagcaaaggctcg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 tctggcagtcttggtttgggttttgaaaatgctgtttcagatttaatgagcaaaggctcg 1506
Query: 1381 ggaggtcacatcggcgcttatgctgttgctagtagacaatcaaatagagg 1430
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 ggaggtcacatcggcgcttatgctgttgctagtagacaatcaaatagagg 1556
>gnl|LJGI|FS339207 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined
scaffold_383, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_383,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (33%)
Length = 622
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 atggaaatggaccctggcaagcttttcattggtgggatttcctgggacacaaatgaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atggaaatggaccctggcaagcttttcattggtgggatttcctgggacacaaatgaagaa 226
Query: 61 cgactcagacagtatttccagaactttggagatgtggttgaagctgtgataatgaaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cgactcagacagtatttccagaactttggagatgtggttgaagctgtgataatgaaggat 286
Query: 121 cgcaccacggggcgtgcccgtggttttggatttgttgtttttgccgatccttctgttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cgcaccacggggcgtgcccgtggttttggatttgttgtttttgccgatccttctgttgct 346
Query: 181 gagcgagttgttatggaaaagcatgtcattgatggtagaactgtggaagcaaaaaaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gagcgagttgttatggaaaagcatgtcattgatggtagaactgtggaagcaaaaaaggct 406
Query: 241 gtccctagagatgatcagaatgttctgagcagaagcaacagcagcagtcatgggtcgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtccctagagatgatcagaatgttctgagcagaagcaacagcagcagtcatgggtcgcca 466
Query: 301 gttccttctcctgtccgcacaaagaagatatttgttggaggtctaccatccacaattact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gttccttctcctgtccgcacaaagaagatatttgttggaggtctaccatccacaattact 526
Query: 361 gagagtgattttaagaactactttgatcagtttggaacaattacagatgttgtcgtgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gagagtgattttaagaactactttgatcagtttggaacaattacagatgttgtcgtgatg 586
Query: 421 tatgaccataacacacaaaggcctagaggttttgga 456
||||||||||||||||||||||||||||||||||||
Sbjct: 587 tatgaccataacacacaaaggcctagaggttttgga 622
>gnl|LJGI|TC64666 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined
scaffold_383, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_383,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 753
Score = 69.9 bits (35), Expect = 4e-11
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 118 gatcgcaccacggggcgtgcccgtggttttggatttgttgtttttgccgatccttctgtt 177
|||||| |||| || ||||| || || || || |||||||| ||||| |||||| |||||
Sbjct: 554 gatcgcgccacaggccgtgctcgaggcttcggttttgttgtctttgctgatcctgctgtt 613
Query: 178 gctgagcgagttgttatggaaaagcatgtcattgatggtagaactgtggaagcaaaaaag 237
|||||| |||| || |||| ||||| | |||||||| ||||||| ||||| || |||
Sbjct: 614 gctgagagagtcattgtggataagcacataattgatggccgaactgttgaagccaagaag 673
Query: 238 gctgtccctagagatgatcagaa 260
||||| ||| | |||||||||||
Sbjct: 674 gctgttcctcgggatgatcagaa 696
>gnl|LJGI|TC62255 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined
scaffold_383, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_383,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 791
Score = 69.9 bits (35), Expect = 4e-11
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 118 gatcgcaccacggggcgtgcccgtggttttggatttgttgtttttgccgatccttctgtt 177
||||||||||| || ||||| || || || || |||||||||||||| |||||| |||||
Sbjct: 547 gatcgcaccacaggccgtgctcgaggcttcggttttgttgtttttgctgatcctgctgtt 606
Query: 178 gctgagcgagttgttatggaaaagcatgtcattgatggtagaactgtggaagcaaaaaag 237
|| || ||||| || |||| ||||| | |||||||| |||| || ||||| || |||
Sbjct: 607 gcagaacgagtcattgtggataagcacataattgatggccgaacggttgaagccaagaag 666
Query: 238 gctgtccctagagatgatcagaa 260
||||| ||| | |||||||||||
Sbjct: 667 gctgttcctcgggatgatcagaa 689