Miyakogusa Predicted Gene
- Lj6g3v1705050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1705050.1 tr|G7ISN0|G7ISN0_MEDTR Galacturonosyltransferase
OS=Medicago truncatula GN=MTR_2g027740 PE=4 SV=1,84.21,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; no description,NULL;
coiled-coil,NULL; Nu,CUFF.59805.1
(1992 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO009824 homologue to UniRef100_A2Q5F4 Cluster: Glycosy... 1340 0.0
gnl|LJGI|TC76093 similar to UniRef100_A2Q5F4 Cluster: Glycosyl t... 1068 0.0
gnl|LJGI|BU494183 homologue to UniRef100_A7R1A2 Cluster: Chromos... 597 e-169
gnl|LJGI|FS329148 UniRef100_UPI000069F8A1 Cluster: Collagen alph... 78 2e-13
gnl|LJGI|FS329890 UniRef100_UPI000069F8A1 Cluster: Collagen alph... 78 2e-13
>gnl|LJGI|GO009824 homologue to UniRef100_A2Q5F4 Cluster: Glycosyl transferase, family
8; n=1; Medicago truncatula|Rep: Glycosyl transferase,
family 8 - Medicago truncatula (Barrel medic), partial
(30%)
Length = 695
Score = 1340 bits (676), Expect = 0.0
Identities = 693/696 (99%), Gaps = 2/696 (0%)
Strand = Plus / Plus
Query: 535 aagctggagaaacaacaagcaacagtaacttctagcaaaacaaacaggaaattacctgta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagctggagaaacaacaagcaacagtaacttctagcaaaacaaacaggaaattacctgta 61
Query: 595 tcatctggaacttataagcagaaagaccaagtgccctcagatgctcagttgcagcaacta 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcatctggaacttataagcagaaagaccaagtgccctcagatgctcagttgcagcaacta 121
Query: 655 aaagatcagctcatccaagcaaaggtctttctttcccttcccgtcgtaaaaagcaacccc 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaagatcagctcatccaagcaaaggtctttctttcccttcccgtcgtaaaaagcaacccc 181
Query: 715 catctcactcgggagcttcgtttacgggtaaaagaagtttcacgaacacttggggatgca 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catctcactcgggagcttcgtttacgggtaaaagaagtttcacgaacacttggggatgca 241
Query: 775 agcaaagattctgatttacctaggaatgcaaatgaaaaaatgaaggcaatggaggaaaca 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agcaaagattctgatttacctaggaatgcaaatgaaaaaatgaaggcaatggaggaaaca 301
Query: 835 ctgatgaaaggaaagcaaattcaagatgattgtgctactgttgtgaagaagcttcgggct 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctgatgaaaggaaagcaaattcaagatgattgtgctactgttgtgaagaagcttcgggct 361
Query: 895 atgatccattcaacagaggagcaggttcatgtactcaagaagcagacgttgttcttaaca 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgatccattcaacagaggagcaggttcatgtactcaagaagcagacgttgttcttaaca 421
Query: 955 caattgacagcaaaaacgctgcccaaaggtcttcattgtcttcctttgcgccttacaact 1014
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 422 caattgacagcaaaaacgctgcccaaaggtcttcattgtcttcctttgtgccttacaact 481
Query: 1015 gagtattataaattgaattcatctcagcaacagtttcccaatcaagagaagttagaagat 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gagtattataaattgaattcatctcagcaacagtttcccaatcaagagaagttagaagat 541
Query: 1075 ccacaactatatcattatgctatattttcagacaacacattggcaaccgctgttgttgtg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccacaactatatcattatgctatattttcagacaacacattggcaaccgctgttgttgtg 601
Query: 1135 aactcaactgttttcaatgctaaggatgcatcaaatcatgtttttcacatcgttactgat 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aactcaactgttttcaatgctaaggatgcatcaaatcatgtttttcacatcgttactgat 661
Query: 1195 aggctcaattatgcggctatgaggatgtggtttttg 1230
| |||| |||||||||||||||||||||||||||||
Sbjct: 662 a-gctc-attatgcggctatgaggatgtggtttttg 695
>gnl|LJGI|TC76093 similar to UniRef100_A2Q5F4 Cluster: Glycosyl transferase, family 8;
n=1; Medicago truncatula|Rep: Glycosyl transferase,
family 8 - Medicago truncatula (Barrel medic), partial
(27%)
Length = 977
Score = 1068 bits (539), Expect = 0.0
Identities = 545/547 (99%)
Strand = Plus / Plus
Query: 1446 gatctttccaaagctcaataaagtgctgttcttggatgatgatatagttgtgcagaagga 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatctttccaaagctcaataaagtgctgttcttggatgatgatatagttgtgcagaagga 60
Query: 1506 tttgactggtctttggtcagtggatttgaaaggcaacgtaaatggtgctgtagaaacttg 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgactggtctttggtcagtggatttgaaaggcaacgtaaatggtgctgtagaaacttg 120
Query: 1566 tggagcaagtttccaccgatttgatcgctatctaaacttctcaaatcctcttattgcaaa 1625
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 tggagcaagtttccaccgatttgatcgctatctaaacttcccaaatcctcttattgcaaa 180
Query: 1626 gaactttgacccacgtgcttgtgggtgggcatatggtatgaatgtatttgatttagtgga 1685
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaactttgacccacgtgcctgtgggtgggcatatggtatgaatgtatttgatttagtgga 240
Query: 1686 atggaagaggcaaaacatcacacaggtgtaccacaactggcagaatctgaatcatgatag 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggaagaggcaaaacatcacacaggtgtaccacaactggcagaatctgaatcatgatag 300
Query: 1746 acaactgtggaagttaggtacactgccaccaggtctgataacattctggaaacgcacttt 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaactgtggaagttaggtacactgccaccaggtctgataacattctggaaacgcacttt 360
Query: 1806 cccactgaaccgttcatggcatgtcttgggtcttggctacaacaccaatgtcaaccaaaa 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccactgaaccgttcatggcatgtcttgggtcttggctacaacaccaatgtcaaccaaaa 420
Query: 1866 agatattgagcggtctgctgttatacactacaacgggaacctgaagccgtggcttgagat 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatattgagcggtctgctgttatacactacaacgggaacctgaagccgtggcttgagat 480
Query: 1926 aagtattcccaagtttcgaagttactgggtcaagtatgttaactatgatcacgcctatat 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagtattcccaagtttcgaagttactgggtcaagtatgttaactatgatcacgcctatat 540
Query: 1986 gcgagaa 1992
|||||||
Sbjct: 541 gcgagaa 547
>gnl|LJGI|BU494183 homologue to UniRef100_A7R1A2 Cluster: Chromosome undetermined
scaffold_342, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_342, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 446
Score = 597 bits (301), Expect = e-169
Identities = 411/445 (92%), Gaps = 2/445 (0%)
Strand = Plus / Plus
Query: 1455 aaagctcaataaa-gtgctgttcttggatgatgatatagttgtgcagaaggatttgactg 1513
||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 aaagctcaacaaacgtgctgttcttggatgatgatatagttgtgcagaaggatctgactg 60
Query: 1514 gtctttggtcagtggatttgaaaggcaacgtaaatggtgctgtagaaacttgtggagcaa 1573
||||||||||| ||||| || ||||| |||||||||||||||||||||||||||| ||
Sbjct: 61 gtctttggtcaactgatttaaagggcaatgtaaatggtgctgtagaaacttgtggagaaa 120
Query: 1574 gtttccaccgatttgatcgctatctaaacttctcaaatcctcttattgcaaagaactttg 1633
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 121 gtttccaccgttttgatcgctatctcaacttctcaaatccacttattgcaaagaattttg 180
Query: 1634 acccacgtgcttgtgggtgggcatatggtatgaatgtatttgatttagtggaatggaaga 1693
|||| | ||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 181 acccccctgcatgtggatgggcatatggtatgaatgtttttgatttagttgaatggaaga 240
Query: 1694 ggcaaaacatcacacaggtgtaccacaactggcagaatctgaatcatgatagacaactgt 1753
|||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 241 ggcaaaacatcacagaggtgtaccacaactggcagaaactgaatcatgatagacaattgt 300
Query: 1754 ggaagttaggtacactgccaccaggtctgataacattctggaaacgcactttcccactga 1813
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct: 301 ggaagttaggaacactgccgcctggtcttataacattctggaaacgcactttcccactga 360
Query: 1814 accgttcatggcatgtcttgggtcttggctacaacaccaatgtcaaccaaaaagatattg 1873
|||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 361 accggtattggcatgtcttgggtcttggctacaaccccaatgtcaacc-aaaagatattg 419
Query: 1874 agcggtctgctgttatacactacaa 1898
| ||| |||||||||||||||||||
Sbjct: 420 aacgggctgctgttatacactacaa 444
>gnl|LJGI|FS329148 UniRef100_UPI000069F8A1 Cluster: Collagen alpha-1(XII) chain
precursor.; n=1; Xenopus tropicalis|Rep: Collagen
alpha-1(XII), partial (0%)
Length = 813
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 195 aactgccattaaggaacctattggggttgtgtataagtcagaggactcaacgattccaga 254
|||||| ||| ||||| ||| |||||||||||||||||||| ||||||||| |||||| |
Sbjct: 203 aactgcaattgaggaatctagtggggttgtgtataagtcagtggactcaactattccaaa 262
Query: 255 gaaaattccta 265
|||| ||||||
Sbjct: 263 gaaatttccta 273
>gnl|LJGI|FS329890 UniRef100_UPI000069F8A1 Cluster: Collagen alpha-1(XII) chain
precursor.; n=1; Xenopus tropicalis|Rep: Collagen
alpha-1(XII), partial (0%)
Length = 789
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 195 aactgccattaaggaacctattggggttgtgtataagtcagaggactcaacgattccaga 254
|||||| ||| ||||| ||| |||||||||||||||||||| ||||||||| |||||| |
Sbjct: 253 aactgcaattgaggaatctagtggggttgtgtataagtcagtggactcaactattccaaa 312
Query: 255 gaaaattccta 265
|||| ||||||
Sbjct: 313 gaaatttccta 323