Miyakogusa Predicted Gene

Lj6g3v1629870.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1629870.1 Non Chatacterized Hit- tr|B9FG33|B9FG33_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.31,0.000000000000004,RNASE_3_1,Ribonuclease III domain; no
description,Ribonuclease III domain; Ribonuclease III
family,R,NODE_67609_length_564_cov_73.893616.path1.1
         (501 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63764 similar to UniRef100_A7PV34 Cluster: Chromosome...   272   2e-72

>gnl|LJGI|TC63764 similar to UniRef100_A7PV34 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 768

 Score =  272 bits (137), Expect = 2e-72
 Identities = 140/141 (99%)
 Strand = Plus / Plus

                                                                       
Query: 360 tggaatgtcacccgggcagttgactgacatgagggcagcatctgtaaataacgactgtta 419
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggaatgtcacccgggcagttaactgacatgagggcagcatctgtaaataacgactgtta 60

                                                                       
Query: 420 tgcatggtcagccattaaggctggcttgcataaacacatactccatgtgtcacaggatct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgcatggtcagccattaaggctggcttgcataaacacatactccatgtgtcacaggatct 120

                                
Query: 480 acataagcatatcacggaggc 500
           |||||||||||||||||||||
Sbjct: 121 acataagcatatcacggaggc 141