Miyakogusa Predicted Gene

Lj6g3v1371870.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1371870.1 Non Chatacterized Hit- tr|I1J4N4|I1J4N4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25180
PE,29.35,0.0000000000001,Ankyrin repeat,Ankyrin repeat-containing
domain; ANK_REPEAT,Ankyrin repeat; ANK_REP_REGION,Ankyrin
r,CUFF.59396.1
         (1752 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS342368 weakly similar to UniRef100_A7P2Q6 Cluster: Ch...  1312   0.0  
gnl|LJGI|TC75011 weakly similar to UniRef100_A7QIB2 Cluster: Chr...    74   3e-12

>gnl|LJGI|FS342368 weakly similar to UniRef100_A7P2Q6 Cluster: Chromosome chr1
           scaffold_5, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (29%)
          Length = 730

 Score = 1312 bits (662), Expect = 0.0
 Identities = 662/662 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatacagtggtaaatggcaactcagcaacatctccacaagcacatgtggttcatatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  atggatacagtggtaaatggcaactcagcaacatctccacaagcacatgtggttcatatt 128

                                                                       
Query: 61  gcttctgctcaaattgatagcccttcacgtgacctaatacaagatccaaggaaatacttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcttctgctcaaattgatagcccttcacgtgacctaatacaagatccaaggaaatacttt 188

                                                                       
Query: 121 gaccaatgtgtacctctttataagctagcactgagaggtgattggaatgcagccaaaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaccaatgtgtacctctttataagctagcactgagaggtgattggaatgcagccaaaact 248

                                                                       
Query: 181 atgataaatgaagacagtttgttgctcaatgctgctataacaagggatcgggggacacta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atgataaatgaagacagtttgttgctcaatgctgctataacaagggatcgggggacacta 308

                                                                       
Query: 241 cttcatgttgtagcaggaacaaaacatgttcactttgtcaatgaactggttaaaatgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cttcatgttgtagcaggaacaaaacatgttcactttgtcaatgaactggttaaaatgctt 368

                                                                       
Query: 301 agagaacaggacctggaactgcaaaactccaatggaaacacagcactatgttttgctgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agagaacaggacctggaactgcaaaactccaatggaaacacagcactatgttttgctgct 428

                                                                       
Query: 361 gcatctggaaatttgcaaattgctaccatgatgatcaagaaaagggaatccctaccaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcatctggaaatttgcaaattgctaccatgatgatcaagaaaagggaatccctaccaaaa 488

                                                                       
Query: 421 atcaggggtggaagtggaatgacacctctttacatggctgccttaaatggaagaagtgac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atcaggggtggaagtggaatgacacctctttacatggctgccttaaatggaagaagtgac 548

                                                                       
Query: 481 atggcaaggtacctttatcccaagactagtgacatattagaagaagaggagcagaatgca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atggcaaggtacctttatcccaagactagtgacatattagaagaagaggagcagaatgca 608

                                                                       
Query: 541 ttgttcttcctcactatcaagcatgatatgtatgatttatgtttgcagatgctacaaaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ttgttcttcctcactatcaagcatgatatgtatgatttatgtttgcagatgctacaaaaa 668

                                                                       
Query: 601 cagccaatgctggcatttatccgggatgagaacaatcaaacaggtttgcatgtcttggct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cagccaatgctggcatttatccgggatgagaacaatcaaacaggtttgcatgtcttggct 728

             
Query: 661 cg 662
           ||
Sbjct: 729 cg 730


>gnl|LJGI|TC75011 weakly similar to UniRef100_A7QIB2 Cluster: Chromosome undetermined
            scaffold_102, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_102, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (39%)
          Length = 1000

 Score = 73.8 bits (37), Expect = 3e-12
 Identities = 112/137 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1375 aaaccaacattcctgttatttgcactatcaaatgcaactgcattgatatcatcttcagcc 1434
            |||||| ||||||| || |||||| ||||| |||| || |||||||| ||||||||| ||
Sbjct: 574  aaaccatcattcctcttgtttgcattatcagatgccacggcattgatctcatcttcaacc 633

                                                                        
Query: 1435 tccatactaattttcttgtctgtgctcatctcaagttatgcagaggatgaccatttcaag 1494
            || || ||||||||| ||||  | ||||||||  | || |||||||||||   | |||||
Sbjct: 634  tcaatcctaattttcctgtccatcctcatctcgcgatacgcagaggatgattttctcaag 693

                             
Query: 1495 tcactgcccttcaagtt 1511
            || |||||||| |||||
Sbjct: 694  tcgctgcccttgaagtt 710