Miyakogusa Predicted Gene
- Lj6g3v1078570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1078570.1 CUFF.58995.1
(531 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67984 similar to UniRef100_Q9ZQ38 Cluster: Expressed ... 1011 0.0
gnl|LJGI|GO032992 similar to UniRef100_Q9ZQ38 Cluster: Expressed... 944 0.0
gnl|LJGI|TC73751 similar to UniRef100_Q9ZQ38 Cluster: Expressed ... 289 9e-78
>gnl|LJGI|TC67984 similar to UniRef100_Q9ZQ38 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (88%)
Length = 929
Score = 1011 bits (510), Expect = 0.0
Identities = 524/531 (98%)
Strand = Plus / Plus
Query: 1 atgtcacggggtggtcgatctgattcaggaatctggttacgctggtgtctggttctgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atgtcacggggtggtcgatctgattcaggaatctggttacgctggtgtctggttctgttc 225
Query: 61 gcggtcgtgtcggcgttgggtgtttgtggacctgctctctactggagattcaagaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gcggtcgtgtcggcgttgggtgtttgtggacctgctctctactggagattcaagaaggga 285
Query: 121 atcgccattcgcgcttccaattcttgccctccatgcctctgtgactgtcctcctccactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atcgccattcgcgcttccaattcttgccctccatgcctctgtgactgtcctcctccactt 345
Query: 181 tctctcttccaagtcgctcctgggctggtcaatctctctgtctcagattgtgggggcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tctctcttccaagtcgctcctgggctggtcaatctctctgtctcagattgtgggggcaat 405
Query: 241 gatccggatctaaaggaggagatggagaagcagttcgtggacctcctcacagaggagctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gatccggatctaaaggaggagatggagaagcagttcgtggacctcctcacagaggagctc 465
Query: 301 aagttgcaagagtctgttgccgaagctcacagtcggcacatgaacataactttcgccgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aagttgcaagagtctgttgccgaagctcacagtcggcacatgaacataactttcgccgaa 525
Query: 361 gcaaaaagagtaggagctcagtaccagagagaagcagacaaatgcattgctgcaactgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gcaaaaagagtaggagctcagtaccagagagaagcagacaaatgcattgctgcaactgaa 585
Query: 421 acatgtgagcaggcgagagaacaagctcaggccaagttcatcaaggagnnnnnnntgact 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 586 acatgtgagcaggcgagagaacaagctcaggccaagttcatcaaggagaaaaaaatgact 645
Query: 481 ttggtgtgggagcgacgagcacgtcaaatgggctgggaaggagaataactg 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttggtgtgggagcgacgagcacgtcaaatgggctgggaaggagaataactg 696
>gnl|LJGI|GO032992 similar to UniRef100_Q9ZQ38 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (70%)
Length = 663
Score = 944 bits (476), Expect = 0.0
Identities = 501/510 (98%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 1 atgtcacggggtggtcgatctgattcaggaatctggttacgctggtgtctggttctgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atgtcacggggtggtcgatctgattcaggaatctggttacgctggtgtctggttctgttc 214
Query: 61 gcggtcgtgtcggcgttgggtgtttgtggacctgctctctactggagattcaagaaggga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 215 gcggtcgtgtcggcgttgggtgtttgtggacctgctctccactggagattcaagaaggga 274
Query: 121 atcgccattcgcgcttccaattcttgccctccatgcctctgtgactgtcctcctccactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atcgccattcgcgcttccaattcttgccctccatgcctctgtgactgtcctcctccactt 334
Query: 181 tctctcttccaagtcgctcctgggctggtcaatctctctgtctcagattgtgggggcaat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 335 tctctcttccaagtcgctcctgggctggtcagtctctctgtctcagattgtgggggcaat 394
Query: 241 gatccggatctaaaggaggagatggagaagcagttcgtggacctcctcacagaggagctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gatccggatctaaaggaggagatggagaagcagttcgtggacctcctcacagaggagctc 454
Query: 301 aagttgcaagagtctgttgccgaagctcacagtcggcacatgaacataactttcgccgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagttgcaagagtctgttgccgaagctcacagtcggcacatgaacataactttcgccgaa 514
Query: 361 gcaaaaagagtaggagctcagtaccagagagaagcagacaaatgcattgctgcaactgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gcaaaaagagtaggagctcagtaccagagagaagcagacaaatgcattgctgcaactgaa 574
Query: 421 acatgtgagcaggcgagagaacaagctcaggccaagttcatcaaggagnnnnnnntgact 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 575 acatgtgagcaggcgagagaacaagctcaggccaagttcatcaaggag-aaaaaatgact 633
Query: 481 ttggtgtgggagcgacgagcacgtcaaatg 510
||||||||||||||||||||||||||||||
Sbjct: 634 ttggtgtgggagcgacgagcacgtcaaatg 663
>gnl|LJGI|TC73751 similar to UniRef100_Q9ZQ38 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (54%)
Length = 665
Score = 289 bits (146), Expect = 9e-78
Identities = 149/150 (99%)
Strand = Plus / Plus
Query: 221 tctcagattgtgggggcaatgatccggatctaaaggaggagatggagaagcagttcgtgg 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tctcagattgtgggggcaatgatccggatctaaaggaggagatggagaagcagttcgtgg 229
Query: 281 acctcctcacagaggagctcaagttgcaagagtctgttgccgaagctcacagtcggcaca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 acctcctcacagaggagctcaagttgcaagagtctgttgccgaagctcacagtcggcaca 289
Query: 341 tgaacataactttcgccgaagcaaaaagag 370
||||||||||||||||||| ||||||||||
Sbjct: 290 tgaacataactttcgccgaggcaaaaagag 319
Score = 196 bits (99), Expect = 1e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 atgtcacggggtggtcgatctgattcaggaatctggttacgctggtgtctggttctgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atgtcacggggtggtcgatctgattcaggaatctggttacgctggtgtctggttctgttc 134
Query: 61 gcggtcgtgtcggcgttgggtgtttgtggacctgctctc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcggtcgtgtcggcgttgggtgtttgtggacctgctctc 173
Score = 149 bits (75), Expect = 2e-35
Identities = 89/96 (92%)
Strand = Plus / Plus
Query: 436 agagaacaagctcaggccaagttcatcaaggagnnnnnnntgactttggtgtgggagcga 495
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 316 agagaacaagctcaggccaagttcatcaaggagaaaaaaatgactttggtgtgggagcga 375
Query: 496 cgagcacgtcaaatgggctgggaaggagaataactg 531
||||||||||||||||||||||||||||||||||||
Sbjct: 376 cgagcacgtcaaatgggctgggaaggagaataactg 411