Miyakogusa Predicted Gene
- Lj6g3v0624140.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0624140.2 Non Chatacterized Hit- tr|G3WK84|G3WK84_SARHA
Uncharacterized protein OS=Sarcophilus harrisii
GN=UCP,32.09,2e-18,MITOCHONDRIAL CARRIER PROTEIN,NULL; FAMILY NOT
NAMED,NULL; SOLCAR,Mitochondrial substrate/solute car,CUFF.58092.2
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67475 similar to UniRef100_A7NYM3 Cluster: Chromosome... 1057 0.0
gnl|LJGI|AV773791 similar to UniRef100_O24391 Cluster: Mitochond... 224 7e-58
gnl|LJGI|TC57739 similar to UniRef100_A7PNZ5 Cluster: Chromosome... 133 2e-30
gnl|LJGI|TC71475 similar to UniRef100_O24391 Cluster: Mitochondr... 92 7e-18
gnl|LJGI|AV778641 UniRef100_Q9DEG0 Cluster: Complement regulator... 56 4e-07
>gnl|LJGI|TC67475 similar to UniRef100_A7NYM3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 742
Score = 1057 bits (533), Expect = 0.0
Identities = 573/592 (96%)
Strand = Plus / Plus
Query: 1 atgtcagatcccaaccgcatctccttcgctcaatccttcttctgcagcgccttcgccgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atgtcagatcccaaccgcatctccttcgctcaatccttcttctgcagcgccttcgccgct 210
Query: 61 tgcttcgccgagttttgcaccattcctctggacacagccaaggtgaggcttcagctccag 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgcttcgccgagctttgcaccattcctctggacacagccaaggtgaggcttcagctccag 270
Query: 121 aagaagacatcatcaggtgcagtnnnnnnnnnnnnnnnnngagtgggttcacccaaatac 180
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 271 aagaagacatcatcaggtgcagttgatgatgatgatgatggagtgggttcacccaaatac 330
Query: 181 agaggcttgctaggaacgattaagaccattgctcgagaagaaggggtttcagctttgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agaggcttgctaggaacgattaagaccattgctcgagaagaaggggtttcagctttgtgg 390
Query: 241 aaaggcattgttcctggtctgcatcgacagtgtttgtatgggggcttgaggattggacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaaggcattgttcctggtctgcatcgacagtgtttgtatgggggcttgaggattggacta 450
Query: 301 tatgatcctgtcaaaacttttcttgttgggtctgcatttgctggagagactcctttgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tatgatcctgtcaaaacttttcttgttgggtctgcatttgctggagagactcctttgtat 510
Query: 361 cacatgattcttgctgctttgattactggtgcgttggcaatcacgattgctaatccaact 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 511 cacatgattcttgctgctttgattactggtgcgctggcaatcacgattgctaatccaact 570
Query: 421 gacctagtcaaaattaggcttcaatctgaaggccaattaccatatggggtacctaagcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gacctagtcaaaattaggcttcaatctgaaggccaattaccatatggggtacctaagcgt 630
Query: 481 tactctggtgctatggatgcgtattcaactatattgagacaagaagggttaggggccttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tactctggtgctatggatgcgtattcaactatattgagacaagaagggttaggggccttt 690
Query: 541 tggactgggcttggccccaatgttgctcggaatgcaattataaatgcggctg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tggactgggcttggccccaatgttgctcggaatgcaattataaatgcggctg 742
>gnl|LJGI|AV773791 similar to UniRef100_O24391 Cluster: Mitochondrial uncoupling
protein; n=1; Solanum tuberosum|Rep: Mitochondrial
uncoupling protein - Solanum tuberosum (Potato), partial
(12%)
Length = 499
Score = 224 bits (113), Expect = 7e-58
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 785 agactttggttaatgagggatttctagccttctataaaggcttccttcctaattttggtc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agactttggttaatgagggatttctagccttctataaaggcttccttcctaattttggtc 440
Query: 845 gacttggagtctggaatgcagtcatgtttcttacacttgaacaagccaaggga 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gacttggagtctggaatgcagtcatgtttcttacacttgaacaagccaaggga 387
>gnl|LJGI|TC57739 similar to UniRef100_A7PNZ5 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1383
Score = 133 bits (67), Expect = 2e-30
Identities = 220/271 (81%)
Strand = Plus / Plus
Query: 497 atgcgtattcaactatattgagacaagaagggttaggggccttttggactgggcttggcc 556
|||| |||||||| || ||||||| ||||| | ||||| |||||||||| |||||||
Sbjct: 577 atgcttattcaacaattgtgagacaggaaggagttggggcactttggactggtcttggcc 636
Query: 557 ccaatgttgctcggaatgcaattataaatgcggctgagctagctagttatgatcaagtga 616
||||| | || | |||| || || ||||| ||||| ||||| || |||||||||||||
Sbjct: 637 ccaatatagcaagaaatggtatcatcaatgctgctgaactagccagctatgatcaagtga 696
Query: 617 agcagacaattttgaaaattccaggattcatggacaatgtctttactcacctcctagctg 676
| |||||||||||||||||||||||||||| |||||||| | ||||| ||||| |||
Sbjct: 697 aacagacaattttgaaaattccaggattcaccgacaatgttgtaactcatctcctttctg 756
Query: 677 gcttaggtgcgggtctttttgctgtctttattggttctccagttgatgtggtgaaatcca 736
| | || || || |||||||||||| ||| || || |||||||||||||| || || |
Sbjct: 757 gtctgggggcagggttttttgctgtctgtatcggctccccagttgatgtggttaagtcta 816
Query: 737 ggatgatgggggattcaacctacaaaagcac 767
| |||||||| ||||| || |||||||||||
Sbjct: 817 gaatgatgggagattctacttacaaaagcac 847
>gnl|LJGI|TC71475 similar to UniRef100_O24391 Cluster: Mitochondrial uncoupling
protein; n=1; Solanum tuberosum|Rep: Mitochondrial
uncoupling protein - Solanum tuberosum (Potato), partial
(98%)
Length = 1203
Score = 91.7 bits (46), Expect = 7e-18
Identities = 184/230 (80%)
Strand = Plus / Plus
Query: 539 tttggactgggcttggccccaatgttgctcggaatgcaattataaatgcggctgagctag 598
||||||||||| | ||||||||| | || | ||||| || || ||||| ||||| ||||
Sbjct: 583 tttggactgggataggccccaatatcgcaagaaatgctatcatcaatgctgctgaactag 642
Query: 599 ctagttatgatcaagtgaagcagacaattttgaaaattccaggattcatggacaatgtct 658
| || |||||||||||||| ||||| ||||||||||||||||| |||| || ||| ||
Sbjct: 643 ccagctatgatcaagtgaaacagactattttgaaaattccagggttcactgataatatcg 702
Query: 659 ttactcacctcctagctggcttaggtgcgggtctttttgctgtctttattggttctccag 718
| || || || || ||||| | || || ||| ||||||| |||| |||||| || ||||
Sbjct: 703 taacacatctacttgctggtcttggggcaggtttttttgcagtctgtattggctccccag 762
Query: 719 ttgatgtggtgaaatccaggatgatgggggattcaacctacaaaagcaca 768
| |||||||| || || || |||||||| ||||| | ||||||||||||
Sbjct: 763 tggatgtggttaagtcaagaatgatgggagattctagttacaaaagcaca 812
>gnl|LJGI|AV778641 UniRef100_Q9DEG0 Cluster: Complement regulatory membrane protein;
n=1; Gallus gallus|Rep: Complement regulatory, partial
(2%)
Length = 541
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 659 ttactcacctcctagctggcttaggtgc 686
||||||||||||||||||||||||||||
Sbjct: 538 ttactcacctcctagctggcttaggtgc 511