Miyakogusa Predicted Gene

Lj6g3v0433920.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0433920.1 tr|D7MH52|D7MH52_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658867
PE,43.44,6e-19, ,CUFF.57825.1
         (453 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65283 similar to UniRef100_A7P3Q6 Cluster: Chromosome...   898   0.0  

>gnl|LJGI|TC65283 similar to UniRef100_A7P3Q6 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 895

 Score =  898 bits (453), Expect = 0.0
 Identities = 453/453 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgaagaaatgtgtttttgagaagatggtactgcagaagaacaggggaagcgtttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgacgaagaaatgtgtttttgagaagatggtactgcagaagaacaggggaagcgtttac 350

                                                                       
Query: 61  agtgacgatcagaaagcgaagaccaacaggttcttgatcaccatcaacatcctaggcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agtgacgatcagaaagcgaagaccaacaggttcttgatcaccatcaacatcctaggcagt 410

                                                                       
Query: 121 gcagggcccataaggttcgtggtgaatgaggaaaagcttgtttctggagttattgacact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gcagggcccataaggttcgtggtgaatgaggaaaagcttgtttctggagttattgacact 470

                                                                       
Query: 181 gctctgaaatcctatgcccgtgaagggaggcttcctgttctggggtttgatgccagcaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gctctgaaatcctatgcccgtgaagggaggcttcctgttctggggtttgatgccagcaat 530

                                                                       
Query: 241 ttccttctttaccgtgccaatgctggatttgatgctttgaatccattggaacccatcgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttccttctttaccgtgccaatgctggatttgatgctttgaatccattggaacccatcgga 590

                                                                       
Query: 301 tcttatggggagaggaattttgtgctgtgcaaaaaaccggtgtaccacccatcgaagaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcttatggggagaggaattttgtgctgtgcaaaaaaccggtgtaccacccatcgaagaca 650

                                                                       
Query: 361 gaaccacaatcagagttgttgtctcaaaagagcagtggtggatggaaagcatggttaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaaccacaatcagagttgttgtctcaaaagagcagtggtggatggaaagcatggttaaac 710

                                            
Query: 421 aaatcatttggtttgaagatcttatcccattaa 453
           |||||||||||||||||||||||||||||||||
Sbjct: 711 aaatcatttggtttgaagatcttatcccattaa 743