Miyakogusa Predicted Gene
- Lj6g3v0145990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0145990.1 tr|C1E6Q7|C1E6Q7_MICSR Anaphase promoting complex
protein OS=Micromonas sp. (strain RCC299 /
NOUM17),25.44,0.0001,WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain; WD_REPEATS_1,WD40 repeat, ,CUFF.57537.1
(822 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome... 404 e-112
gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome... 230 1e-59
gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosom... 72 6e-12
>gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 787
Score = 404 bits (204), Expect = e-112
Identities = 216/220 (98%)
Strand = Plus / Plus
Query: 45 ggatgccaaacttttcgcagcaggatttatgcactctaagcttcaactctgggatgctga 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggatgccaaacttttcgcagcaggatttatgcactctaagcttcaactctgggatgctga 627
Query: 105 gacttctaagccaataagagtgctagaaggtcatcgtcaaaggattggaaccattgcatg 164
||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||
Sbjct: 628 gacttctaagccaataagagtcctagaaagtcatggtcaaaggattggaaccattgcatg 687
Query: 165 gagtggcgatactttaacttctggaagccatgacaaatctataatcaaccatgatgttag 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gagtggcgatactttaacttctggaagccatgacaaatctataatcaaccatgatgttag 747
Query: 225 agcaagaagaaatgttatttcatgggtaaaagcacacgga 264
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 748 agcaagaagaaatgttatttcacgggtaaaagcacacgga 787
Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atgcaccaaatattagaaatgactactattcaaaca 36
||||||||||||||||||||||||||||||||||||
Sbjct: 393 atgcaccaaatattagaaatgactactattcaaaca 428
>gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 629
Score = 230 bits (116), Expect = 1e-59
Identities = 122/124 (98%)
Strand = Plus / Plus
Query: 699 gagcccagatgggttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcccagatgggttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 60
Query: 759 tatttttgggccacctgctactgatacatcaaatatctcatatctggataaccttttgtc 818
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 61 tatttttgggccacctgctactgatacatcaaagatctcacatctggataaccttttgtc 120
Query: 819 cctg 822
||||
Sbjct: 121 cctg 124
>gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 825
Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atgcaccaaatattagaaatgactactattcaaaca 36
||||||||||||||||||||||||||||||||||||
Sbjct: 638 atgcaccaaatattagaaatgactactattcaaaca 673