Miyakogusa Predicted Gene

Lj5g3v2237610.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2237610.2 tr|B1A9T6|B1A9T6_9FABA Oleate desaturase
OS=Caragana korshinskii GN=FAD2-1A PE=2 SV=1,85,0,FA_desaturase,Fatty
acid desaturase, type 1; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.56975.2
         (1140 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73281 similar to UniRef100_A4ZYU3 Cluster: Oleate des...   107   2e-22

>gnl|LJGI|TC73281 similar to UniRef100_A4ZYU3 Cluster: Oleate desaturase; n=1; Caragana
            korshinskii var. intermedia|Rep: Oleate desaturase -
            Caragana korshinskii var. intermedia, complete
          Length = 1631

 Score =  107 bits (54), Expect = 2e-22
 Identities = 225/282 (79%)
 Strand = Plus / Plus

                                                                        
Query: 790  atcacttatttgcagcacacacacagtgctttacctcactatgattcatctgaatgggac 849
            ||||| || ||||||||||| |||  ||| || || ||||||||||| || || ||||||
Sbjct: 881  atcacatacttgcagcacactcaccctgcattgccgcactatgattcctccgagtgggac 940

                                                                        
Query: 850  tggttaaggggtgctctggcaactgtggacagagattatgggattctcaacaaggtcttt 909
            ||||| || || ||| ||||||| |||||||| |||||||| || || ||||||||||| 
Sbjct: 941  tggttcagaggagctttggcaacagtggacagggattatggcatcctgaacaaggtcttc 1000

                                                                        
Query: 910  catcatataactgatacgcatgttgcacaccatctgttttcaacaatgccacattaccat 969
            ||| | || || || || ||| | ||||| ||  |||| || |||||||||||||| |||
Sbjct: 1001 cataacattacagacactcatatagcacatcacttgttctccacaatgccacattatcat 1060

                                                                        
Query: 970  gcaatggaagcaaccaatgcaatgaagcatgtgttgggtgagtactatagatttgatgac 1029
            |||||||| || || || ||||| ||||   |  |||| ||||| ||| | ||||||   
Sbjct: 1061 gcaatggaggctacaaaggcaataaagccaattctgggagagtattatcggtttgattca 1120

                                                      
Query: 1030 accccattttacaaggcactgtggagagaagcaagagagtgt 1071
            || ||||||||||||||| | |||||||| |||| |||||||
Sbjct: 1121 actccattttacaaggcaatatggagagaggcaacagagtgt 1162



 Score = 65.9 bits (33), Expect = 5e-10
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 260 tccaaggatgcatcctcactggggtgtgggtgattgctcatgagtgtggtcaccatgcat 319
           ||||||| ||||||||||| || || ||||| ||||| ||||||||||| ||||||||||
Sbjct: 351 tccaaggttgcatcctcaccggagtttgggtcattgcacatgagtgtggccaccatgcat 410

            
Query: 320 t 320
           |
Sbjct: 411 t 411