Miyakogusa Predicted Gene
- Lj5g3v2030810.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2030810.2 tr|B9DH81|B9DH81_ARATH AT5G51780 protein
OS=Arabidopsis thaliana GN=AT5G51780 PE=2
SV=1,37.43,3e-19,HLH,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding domain,Helix-loop-helix domain; no de,CUFF.56477.2
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594424 weakly similar to UniRef100_A7QGX2 Cluster: Ch... 1009 0.0
gnl|LJGI|GO025906 similar to UniRef100_A5D3M5 Cluster: Predicted... 757 0.0
gnl|LJGI|TC70129 weakly similar to UniRef100_A7QGX2 Cluster: Chr... 56 2e-07
>gnl|LJGI|DC594424 weakly similar to UniRef100_A7QGX2 Cluster: Chromosome chr16
scaffold_94, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_94, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 592
Score = 1009 bits (509), Expect = 0.0
Identities = 509/509 (100%)
Strand = Plus / Plus
Query: 1 atggcggaagataagattcaacgtatcatatcttcaacttctgacaacgatgaaaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 atggcggaagataagattcaacgtatcatatcttcaacttctgacaacgatgaaaagaag 88
Query: 61 atcaatcgtagggaagttgaaagacaaaggaggacccaaatgtcggttctatgtgcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atcaatcgtagggaagttgaaagacaaaggaggacccaaatgtcggttctatgtgcttct 148
Query: 121 ctccgctcttcactccctcttgagctcatcaagggaaagcgttctgtatcagatctcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ctccgctcttcactccctcttgagctcatcaagggaaagcgttctgtatcagatctcata 208
Query: 181 ggggaggctgtaaatcatgtccaatttctgaagcaaaagatcaatgcacttcaaattaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggggaggctgtaaatcatgtccaatttctgaagcaaaagatcaatgcacttcaaattaag 268
Query: 241 agagatgaactcaaagagatgatggtaaatttaagttttgttaaaactgaaactgttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agagatgaactcaaagagatgatggtaaatttaagttttgttaaaactgaaactgttgga 328
Query: 301 gcagatcattcaagtgcactagggaagtgtgtcagcatcaatctcattccaggcggtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcagatcattcaagtgcactagggaagtgtgtcagcatcaatctcattccaggcggtgtg 388
Query: 361 gaagttgcagtgtacggtagtggttttgaagaaaacagtacacgtttatcagttttgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaagttgcagtgtacggtagtggttttgaagaaaacagtacacgtttatcagttttgatg 448
Query: 421 caaatattgcttcaagaaggatgtgatgttgttagctgtgtttcttccttagtaaatggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caaatattgcttcaagaaggatgtgatgttgttagctgtgtttcttccttagtaaatggg 508
Query: 481 agaatctttcatactatcaagtctgaggt 509
|||||||||||||||||||||||||||||
Sbjct: 509 agaatctttcatactatcaagtctgaggt 537
>gnl|LJGI|GO025906 similar to UniRef100_A5D3M5 Cluster: Predicted GTPase; n=1;
Pelotomaculum thermopropionicum SI|Rep: Predicted GTPase
-, partial (3%)
Length = 685
Score = 757 bits (382), Expect = 0.0
Identities = 385/386 (99%)
Strand = Plus / Plus
Query: 194 atcatgtccaatttctgaagcaaaagatcaatgcacttcaaattaagagagatgaactca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atcatgtccaatttctgaagcaaaagatcaatgcacttcaaattaagagagatgaactca 61
Query: 254 aagagatgatggtaaatttaagttttgttaaaactgaaactgttggagcagatcattcaa 313
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 62 aagagatgatggtaaatttaagttttgttaaaactgaaactgttggagcggatcattcaa 121
Query: 314 gtgcactagggaagtgtgtcagcatcaatctcattccaggcggtgtggaagttgcagtgt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgcactagggaagtgtgtcagcatcaatctcattccaggcggtgtggaagttgcagtgt 181
Query: 374 acggtagtggttttgaagaaaacagtacacgtttatcagttttgatgcaaatattgcttc 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acggtagtggttttgaagaaaacagtacacgtttatcagttttgatgcaaatattgcttc 241
Query: 434 aagaaggatgtgatgttgttagctgtgtttcttccttagtaaatgggagaatctttcata 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagaaggatgtgatgttgttagctgtgtttcttccttagtaaatgggagaatctttcata 301
Query: 494 ctatcaagtctgaggtgaaggacctgacatgccttgatcttgctaggcttcaacacagat 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctatcaagtctgaggtgaaggacctgacatgccttgatcttgctaggcttcaacacagat 361
Query: 554 tggatcaagcaatcttgtcaaggtaa 579
||||||||||||||||||||||||||
Sbjct: 362 tggatcaagcaatcttgtcaaggtaa 387
>gnl|LJGI|TC70129 weakly similar to UniRef100_A7QGX2 Cluster: Chromosome chr16
scaffold_94, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_94, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 1234
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 133 ctccctcttgagctcatcaagggaaagcgttc 164
|||||||||||| |||||||||||||||||||
Sbjct: 377 ctccctcttgagttcatcaagggaaagcgttc 408