Miyakogusa Predicted Gene

Lj5g3v1888370.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1888370.1 Non Chatacterized Hit- tr|A3IZC0|A3IZC0_9CHRO
Putative uncharacterized protein OS=Cyanothece sp.
CCY,54.88,4e-19,YGGT,Uncharacterised protein family Ycf19,CUFF.56099.1
         (648 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80932 homologue to UniRef100_A7PNE2 Cluster: Chromoso...  1285   0.0  

>gnl|LJGI|TC80932 homologue to UniRef100_A7PNE2 Cluster: Chromosome chr1 scaffold_22,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_22, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 729

 Score = 1285 bits (648), Expect = 0.0
 Identities = 648/648 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacaatggccacgcaatcttatcttgtgaatctgaactccttccatgcgggaaccaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   atgacaatggccacgcaatcttatcttgtgaatctgaactccttccatgcgggaaccaga 62

                                                                       
Query: 61  ggatggaaaccttcgcctaccaagtttggctttggtgtctggagaagctcaaagtatcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ggatggaaaccttcgcctaccaagtttggctttggtgtctggagaagctcaaagtatcct 122

                                                                       
Query: 121 gctaaaacaaatctccatagaagttctccagtcatgcattgttgctcatgttacacacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gctaaaacaaatctccatagaagttctccagtcatgcattgttgctcatgttacacacaa 182

                                                                       
Query: 181 gttggagcttctgcagacataacaacattctcaatattggatgctgttgctacacaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gttggagcttctgcagacataacaacattctcaatattggatgctgttgctacacaaaat 242

                                                                       
Query: 241 tctctttattcagatgtagacttgaatactctcaagcttagtgtaccagaaactttacac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tctctttattcagatgtagacttgaatactctcaagcttagtgtaccagaaactttacac 302

                                                                       
Query: 301 gccgcctccacagatttcatgtcagggttggttcttgctgatattgatccagctactgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gccgcctccacagatttcatgtcagggttggttcttgctgatattgatccagctactgca 362

                                                                       
Query: 361 aaactagctattgggtttctaggtcccttcctctcagtgtttggttttctctttatcata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aaactagctattgggtttctaggtcccttcctctcagtgtttggttttctctttatcata 422

                                                                       
Query: 421 agaatcgtcatgtcctggtacccgaaactccctgtgggaaagtttccatatgtaatagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agaatcgtcatgtcctggtacccgaaactccctgtgggaaagtttccatatgtaatagct 482

                                                                       
Query: 481 tatgctcccactgagcctcttctcattcctacccggaaagtgattcctcctcttgctggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tatgctcccactgagcctcttctcattcctacccggaaagtgattcctcctcttgctggt 542

                                                                       
Query: 541 gtggatgttactcctgtggtgtggtttggattgctcagttttcttaacgaaatattagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gtggatgttactcctgtggtgtggtttggattgctcagttttcttaacgaaatattagtt 602

                                                           
Query: 601 ggtcctcaaggactactagttctcctttcccaaaaagtcaattagcta 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ggtcctcaaggactactagttctcctttcccaaaaagtcaattagcta 650