Miyakogusa Predicted Gene

Lj5g3v1867760.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1867760.1 tr|Q9SH36|Q9SH36_ARATH At1g63520 OS=Arabidopsis
thaliana GN=At1g63520 PE=2 SV=1,26.6,3e-18,DUF3527,Protein of unknown
function DUF3527; FAMILY NOT NAMED,NULL;
seg,NULL,NODE_32283_length_3386_cov_34.411991.path2.1
         (2571 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70445 weakly similar to UniRef100_Q981E2 Cluster: Rib...   513   e-144

>gnl|LJGI|TC70445 weakly similar to UniRef100_Q981E2 Cluster: Ribokinase; n=1;
            Sulfolobus solfataricus|Rep: Ribokinase - Sulfolobus
            solfataricus, partial (7%)
          Length = 558

 Score =  513 bits (259), Expect = e-144
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2313 accctttcagcatggaatatattcaatagcatatgatccatcactcacacttttgcaagc 2372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    accctttcagcatggaatatattcaatagcatatgatccatcactcacacttttgcaagc 60

                                                                        
Query: 2373 attctccatcagcatagcattactggacagtaagatgccacatgggctttctggatcaag 2432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   attctccatcagcatagcattactggacagtaagatgccacatgggctttctggatcaag 120

                                                                        
Query: 2433 aagctccattgaagggaaaattccaagagagacactagtggcgcaaaccgaggaactaga 2492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aagctccattgaagggaaaattccaagagagacactagtggcgcaaaccgaggaactaga 180

                                                                        
Query: 2493 ggcttttgggaaattggaggacattcctgcaagttttgtttcttatccaccggtctctcc 2552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ggcttttgggaaattggaggacattcctgcaagttttgtttcttatccaccggtctctcc 240

                               
Query: 2553 tgttggtagggtctaatat 2571
            |||||||||||||||||||
Sbjct: 241  tgttggtagggtctaatat 259