Miyakogusa Predicted Gene
- Lj5g3v1864520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1864520.1 Non Chatacterized Hit- tr|I1NHA4|I1NHA4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.14308
PE,89.62,0,UNCHARACTERIZED,NULL; SNARE_assoc,SNARE associated Golgi
protein,CUFF.56080.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341295 similar to UniRef100_Q8L586 Cluster: Uncharact... 581 e-165
gnl|LJGI|TC75010 homologue to UniRef100_A7Q7F5 Cluster: Chromoso... 484 e-136
gnl|LJGI|TC75048 similar to UniRef100_A7Q7F5 Cluster: Chromosome... 375 e-103
gnl|LJGI|TC72162 similar to UniRef100_A7PC67 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|FS341295 similar to UniRef100_Q8L586 Cluster: Uncharacterized membrane
protein At4g09580; n=1; Arabidopsis thaliana|Rep:
Uncharacterized membrane protein At4g09580 - Arabidopsis
thaliana (Mouse-ear cress), partial (57%)
Length = 734
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 145 acttttatgattcctggaacaatcttcatgtctttgttggctggtgctctttttggagtt 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acttttatgattcctggaacaatcttcatgtctttgttggctggtgctctttttggagtt 501
Query: 205 gttcgagggataatgttggttgttttcaatgccactgctggagcctcttcatgcttctta 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gttcgagggataatgttggttgttttcaatgccactgctggagcctcttcatgcttctta 561
Query: 265 ttgtccaagttgattggaaggcctttagtttcttggttgtggccggaaaggttaaggttt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgtccaagttgattggaaggcctttagtttcttggttgtggccggaaaggttaaggttt 621
Query: 325 ttccaagcagagatcgcaaagcgtagggataagctgctgaattacatgctttttctgcgg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttccaagcagagatcgcaaagcgtagggataagctgctgaattacatgctttttctgcgg 681
Query: 385 gtgaccccaacattgccaaatcttttcatcaatttggcatctccaattgttga 437
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtgaccccaacattgccaaatcttttcatcaatttggcatctccaattgttga 734
Score = 131 bits (66), Expect = 6e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 atgcccgccaccgcttccgcccacctcaaattgccccgtaccctctccgatcttcgcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgcccgccaccgcttccgcccacctcaaattgccccgtaccctctccgatcttcgcata 436
Query: 61 ctcaaa 66
||||||
Sbjct: 437 ctcaaa 442
>gnl|LJGI|TC75010 homologue to UniRef100_A7Q7F5 Cluster: Chromosome chr18
scaffold_59, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_59, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 659
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 399 gccaaatcttttcatcaatttggcatctccaattgttgacgtaccatttcatatcttctt 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaaatcttttcatcaatttggcatctccaattgttgacgtaccatttcatatcttctt 60
Query: 459 tttggcaacattggtcggtcttattccagcttcgtatattactgtccgagctggccttgc 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttggcaacattggtcggtcttattccagcttcgtatattactgtccgagctggccttgc 120
Query: 519 tcttggggatctaaagtcagttaaggatctatatgattttaagacattatcagtactttt 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcttggggatctaaagtcagttaaggatctatatgattttaagacattatcagtactttt 180
Query: 579 cctcattggctgtgtggccatagttccaacacttttgaagaggaagcgagtttatgaatg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctcattggctgtgtggccatagttccaacacttttgaagaggaagcgagtttatgaatg 240
Query: 639 aagt 642
||||
Sbjct: 241 aagt 244
>gnl|LJGI|TC75048 similar to UniRef100_A7Q7F5 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 617
Score = 375 bits (189), Expect = e-103
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 1 atgcccgccaccgcttccgcccacctcaaattgccccgtaccctctccgatcttcgcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atgcccgccaccgcttccgcccacctcaaattgccccgtaccctctccgatcttcgcata 488
Query: 61 ctcaaagaacatctttcagcatatgctaataatcatcctgcacagttcattcttggttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctcaaagaacatctttcagcatatgctaataatcatcctgcacagttcattcttggttac 548
Query: 121 tgctctatctacatctttatgcagacttttatgattcctggaacaatcttcatgtctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgctctatctacatctttatgcagacttttatgattcctggaacaatcttcatgtctttg 608
Query: 181 ttggctggt 189
|||||||||
Sbjct: 609 ttggctggt 617
>gnl|LJGI|TC72162 similar to UniRef100_A7PC67 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1333
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 221 tggttgttttcaatgccactgctggagcctcttcatgcttctt 263
||||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 487 tggttgtattcaatgcaaccgctggagcttcttcatgcttctt 529