Miyakogusa Predicted Gene
- Lj5g3v1696670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1696670.1 Non Chatacterized Hit- tr|C5YXQ2|C5YXQ2_SORBI
Putative uncharacterized protein Sb09g019910
OS=Sorghu,46,3e-19,seg,NULL; zf-CW,Zinc finger, CW-type; FAMILY NOT
NAMED,NULL; ZF_CW,Zinc finger, CW-type,CUFF.55710.1
(303 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57518 similar to UniRef100_O49655 Cluster: Predicted ... 601 e-171
gnl|LJGI|TC60860 weakly similar to UniRef100_A7PU35 Cluster: Chr... 295 8e-80
gnl|LJGI|BW598267 101 2e-21
>gnl|LJGI|TC57518 similar to UniRef100_O49655 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein -
Arabidopsis thaliana (Mouse-ear cress), partial (19%)
Length = 869
Score = 601 bits (303), Expect = e-171
Identities = 303/303 (100%)
Strand = Plus / Plus
Query: 1 atggcgaccggtcaagaaatcaccaaatctccacccacttcctcttccaagagatcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atggcgaccggtcaagaaatcaccaaatctccacccacttcctcttccaagagatcagtg 107
Query: 61 ttgagtcagggttccattgatgtatatgctgcacaatgcatcaagtgcttgaaatggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ttgagtcagggttccattgatgtatatgctgcacaatgcatcaagtgcttgaaatggagg 167
Query: 121 gtgattgatacccagcaggagtttgaagagatcagacataaggtcagtcaggaacctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gtgattgatacccagcaggagtttgaagagatcagacataaggtcagtcaggaacctttt 227
Query: 181 gattgtagcagaaaggctaattgttcctgtgatgatcctgctgatattgaatatgactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gattgtagcagaaaggctaattgttcctgtgatgatcctgctgatattgaatatgactcc 287
Query: 241 tctcggacatgggttattgacaagcctaacctcccaaagacaccagaagggttcaagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tctcggacatgggttattgacaagcctaacctcccaaagacaccagaagggttcaagaga 347
Query: 301 agc 303
|||
Sbjct: 348 agc 350
>gnl|LJGI|TC60860 weakly similar to UniRef100_A7PU35 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (52%)
Length = 807
Score = 295 bits (149), Expect = 8e-80
Identities = 233/261 (89%)
Strand = Plus / Plus
Query: 43 tcttccaagagatcagtgttgagtcagggttccattgatgtatatgctgcacaatgcatc 102
|||||||||||||||||||| |||||||||||| ||||| |||||||| | || |||||
Sbjct: 131 tcttccaagagatcagtgttaagtcagggttccgttgatatatatgctacgcagtgcatt 190
Query: 103 aagtgcttgaaatggagggtgattgatacccagcaggagtttgaagagatcagacataag 162
||||||||||| ||||||||| ||||||| ||| |||||||||||||| | ||||| ||
Sbjct: 191 aagtgcttgaagtggagggtggttgatacgcaggaggagtttgaagagtttagacaaaaa 250
Query: 163 gtcagtcaggaaccttttgattgtagcagaaaggctaattgttcctgtgatgatcctgct 222
| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gccaatgaggaaccttttgattgtagcagaaaggctaattgttcctgtgatgatcctgct 310
Query: 223 gatattgaatatgactcctctcggacatgggttattgacaagcctaacctcccaaagaca 282
|| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 311 gacattgaatatgactcctctcggacatgggttattgacaaacctaatgttccaaagacg 370
Query: 283 ccagaagggttcaagagaagc 303
||| |||| || | |||||||
Sbjct: 371 ccacaaggttttaggagaagc 391
>gnl|LJGI|BW598267
Length = 486
Score = 101 bits (51), Expect = 2e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1 atggcgaccggtcaagaaatcaccaaatctccacccacttcctcttccaag 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 atggcgaccggtcaagaaatcaccaaatctccacccacttcctcttccaag 79