Miyakogusa Predicted Gene

Lj5g3v0977290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0977290.1 Non Chatacterized Hit- tr|C0JP24|C0JP24_LOTJA
Putative basic helix-loop-helix protein BHLH6
OS=Lotus,48.65,5.9,seg,NULL,CUFF.54462.1
         (283 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69637 similar to UniRef100_A0CRQ4 Cluster: Chromosome...   153   7e-37

>gnl|LJGI|TC69637 similar to UniRef100_A0CRQ4 Cluster: Chromosome undetermined
           scaffold_25, whole genome shotgun sequence; n=1;
           Paramecium tetraurelia|Rep: Chromosome undetermined
           scaffold_25, whole genome shotgun sequence - Paramecium
           tetraurelia, partial (3%)
          Length = 729

 Score =  153 bits (77), Expect = 7e-37
 Identities = 176/209 (84%)
 Strand = Plus / Plus

                                                                       
Query: 61  aaaagttcgcagaggggaaggccaaagggcagcaaaaataaacctattgctttaccagat 120
           ||||| || ||||||||| |||| ||||| ||||||||||||||||| || || ||   |
Sbjct: 2   aaaagctcacagaggggacggcctaagggtagcaaaaataaacctatagcgttgccgatt 61

                                                                       
Query: 121 gattatctcgagccagtgacaggggaagatggggtgacaacacgcgcgcagcgagcttgg 180
           |||| | | || ||||| ||||| || ||||| || ||||||||||||||||||||||||
Sbjct: 62  gattttttagaaccagttacaggtgaggatggcgtcacaacacgcgcgcagcgagcttgg 121

                                                                       
Query: 181 ttgcttggaaagaagttaggattaaaacctcgaggttctgaagcattgatgttgagagga 240
           ||||||||  || || ||||||||||||| || ||||| |||||| | ||||||||||| 
Sbjct: 122 ttgcttggtcaggagctaggattaaaaccgcgcggttcagaagcactaatgttgagaggt 181

                                        
Query: 241 ttggaagctcaaattcgtgaaaaccaccc 269
           |||||||| ||||| |||||||| |||||
Sbjct: 182 ttggaagcccaaatccgtgaaaatcaccc 210