Miyakogusa Predicted Gene
- Lj5g3v0841020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0841020.1 tr|B7FI20|B7FI20_MEDTR Syntaxin-121 OS=Medicago
truncatula GN=MTR_1g056550 PE=2
SV=1,86.32,0,SYNTAXIN,Syntaxin/epimorphin, conserved site;
SNARE,Target SNARE coiled-coil domain; Syntaxin,Syntax,CUFF.54030.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67951 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-r... 1808 0.0
gnl|LJGI|TC73271 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-r... 961 0.0
gnl|LJGI|BW597145 similar to UniRef100_A7QQV5 Cluster: Chromosom... 460 e-129
gnl|LJGI|TC64604 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-r... 454 e-127
gnl|LJGI|TC72668 similar to UniRef100_A7QQV5 Cluster: Chromosome... 80 3e-14
gnl|LJGI|TC59242 similar to UniRef100_Q9SVC2 Cluster: Syntaxin-1... 66 4e-10
>gnl|LJGI|TC67951 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-related protein
Nt-syr1; n=1; Nicotiana tabacum|Rep: Syntaxin-related
protein Nt-syr1 - Nicotiana tabacum (Common tobacco),
partial (91%)
Length = 1481
Score = 1808 bits (912), Expect = 0.0
Identities = 912/912 (100%)
Strand = Plus / Plus
Query: 1 atgaacgacttgttttccagcttccggaacacggaccaagtctcaccggatagccacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgaacgacttgttttccagcttccggaacacggaccaagtctcaccggatagccacaac 211
Query: 61 catgtgatcgagatggcagctgcagccgcatctgatggcggtgtgaacctggacaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 catgtgatcgagatggcagctgcagccgcatctgatggcggtgtgaacctggacaaattc 271
Query: 121 ttcgaggaagtcgaaggagtcaaggatgagctgaaggagctggagcgtctctacgagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttcgaggaagtcgaaggagtcaaggatgagctgaaggagctggagcgtctctacgagaat 331
Query: 181 ctcagatcgtcccacgagaagagcaagacccttcacagcgcgaaggctgtgaaggatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctcagatcgtcccacgagaagagcaagacccttcacagcgcgaaggctgtgaaggatctt 391
Query: 241 cgcgcgcggatggatgctgacgtggcgctcgctcttaagaaagcgaagctcattaagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cgcgcgcggatggatgctgacgtggcgctcgctcttaagaaagcgaagctcattaagctg 451
Query: 301 cggctcgaggcgcttgaccggtccaacgaggccagccgaagcttgcctggagctggaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cggctcgaggcgcttgaccggtccaacgaggccagccgaagcttgcctggagctggaccg 511
Query: 361 ggttcatcctcggaccggactaggacttcagttgtaagtgggttgaggaagaagctgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggttcatcctcggaccggactaggacttcagttgtaagtgggttgaggaagaagctgaag 571
Query: 421 gactccatggacagcttcaatagcctcagacaacagatttcttctgagtacagggacacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gactccatggacagcttcaatagcctcagacaacagatttcttctgagtacagggacacc 631
Query: 481 gtgcaacgtagatactacaccgttaccggagagaatcctgatgagaaaaccattgatctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtgcaacgtagatactacaccgttaccggagagaatcctgatgagaaaaccattgatctc 691
Query: 541 ctcatctccactggtgaaagtgaaacattcttgcagaaagccatccaacaacaaggtaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctcatctccactggtgaaagtgaaacattcttgcagaaagccatccaacaacaaggtaga 751
Query: 601 gccaccattatggacacaatccaagagattcaagagaggcatgactcggtgaaagagata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gccaccattatggacacaatccaagagattcaagagaggcatgactcggtgaaagagata 811
Query: 661 gagaggcacctcaacgagctgcaccaagttttcatggacatggcagtgctagtccaatcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gagaggcacctcaacgagctgcaccaagttttcatggacatggcagtgctagtccaatcc 871
Query: 721 cagggtgagcaactagacgacatcgagagccacgtggcgcgagctaactcgtatgtgagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 cagggtgagcaactagacgacatcgagagccacgtggcgcgagctaactcgtatgtgagg 931
Query: 781 ggcggggtccagcagttgactattgctaggaagcaccagaagaatacccgaaaatggacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ggcggggtccagcagttgactattgctaggaagcaccagaagaatacccgaaaatggacc 991
Query: 841 tgcattgcgattatattgttgctgattatcatcttgattatagtcctgcctattgtcctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 tgcattgcgattatattgttgctgattatcatcttgattatagtcctgcctattgtcctt 1051
Query: 901 aaaaattgatca 912
||||||||||||
Sbjct: 1052 aaaaattgatca 1063
>gnl|LJGI|TC73271 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-related protein
Nt-syr1; n=1; Nicotiana tabacum|Rep: Syntaxin-related
protein Nt-syr1 - Nicotiana tabacum (Common tobacco),
partial (46%)
Length = 743
Score = 961 bits (485), Expect = 0.0
Identities = 488/489 (99%)
Strand = Plus / Plus
Query: 1 atgaacgacttgttttccagcttccggaacacggaccaagtctcaccggatagccacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atgaacgacttgttttccagcttccggaacacggaccaagtctcaccggatagccacaac 314
Query: 61 catgtgatcgagatggcagctgcagccgcatctgatggcggtgtgaacctggacaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 catgtgatcgagatggcagctgcagccgcatctgatggcggtgtgaacctggacaaattc 374
Query: 121 ttcgaggaagtcgaaggagtcaaggatgagctgaaggagctggagcgtctctacgagaat 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttcgaagaagtcgaaggagtcaaggatgagctgaaggagctggagcgtctctacgagaat 434
Query: 181 ctcagatcgtcccacgagaagagcaagacccttcacagcgcgaaggctgtgaaggatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ctcagatcgtcccacgagaagagcaagacccttcacagcgcgaaggctgtgaaggatctt 494
Query: 241 cgcgcgcggatggatgctgacgtggcgctcgctcttaagaaagcgaagctcattaagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cgcgcgcggatggatgctgacgtggcgctcgctcttaagaaagcgaagctcattaagctg 554
Query: 301 cggctcgaggcgcttgaccggtccaacgaggccagccgaagcttgcctggagctggaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cggctcgaggcgcttgaccggtccaacgaggccagccgaagcttgcctggagctggaccg 614
Query: 361 ggttcatcctcggaccggactaggacttcagttgtaagtgggttgaggaagaagctgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ggttcatcctcggaccggactaggacttcagttgtaagtgggttgaggaagaagctgaag 674
Query: 421 gactccatggacagcttcaatagcctcagacaacagatttcttctgagtacagggacacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gactccatggacagcttcaatagcctcagacaacagatttcttctgagtacagggacacc 734
Query: 481 gtgcaacgt 489
|||||||||
Sbjct: 735 gtgcaacgt 743
>gnl|LJGI|BW597145 similar to UniRef100_A7QQV5 Cluster: Chromosome undetermined
scaffold_145, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_145,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 488
Score = 460 bits (232), Expect = e-129
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 553 ggtgaaagtgaaacattcttgcagaaagccatccaacaacaaggtagagccaccattatg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggtgaaagtgaaacattcttgcagaaagccatccaacaacaaggtagagccaccattatg 316
Query: 613 gacacaatccaagagattcaagagaggcatgactcggtgaaagagatagagaggcacctc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gacacaatccaagagattcaagagaggcatgactcggtgaaagagatagagaggcacctc 376
Query: 673 aacgagctgcaccaagttttcatggacatggcagtgctagtccaatcccagggtgagcaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aacgagctgcaccaagttttcatggacatggcagtgctagtccaatcccagggtgagcaa 436
Query: 733 ctagacgacatcgagagccacgtggcgcgagctaactcgtatgtgaggggcg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctagacgacatcgagagccacgtggcgcgagctaactcgtatgtgaggggcg 488
>gnl|LJGI|TC64604 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-related protein
Nt-syr1; n=1; Nicotiana tabacum|Rep: Syntaxin-related
protein Nt-syr1 - Nicotiana tabacum (Common tobacco),
partial (23%)
Length = 668
Score = 454 bits (229), Expect = e-127
Identities = 229/229 (100%)
Strand = Plus / Plus
Query: 684 ccaagttttcatggacatggcagtgctagtccaatcccagggtgagcaactagacgacat 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 ccaagttttcatggacatggcagtgctagtccaatcccagggtgagcaactagacgacat 115
Query: 744 cgagagccacgtggcgcgagctaactcgtatgtgaggggcggggtccagcagttgactat 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cgagagccacgtggcgcgagctaactcgtatgtgaggggcggggtccagcagttgactat 175
Query: 804 tgctaggaagcaccagaagaatacccgaaaatggacctgcattgcgattatattgttgct 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tgctaggaagcaccagaagaatacccgaaaatggacctgcattgcgattatattgttgct 235
Query: 864 gattatcatcttgattatagtcctgcctattgtccttaaaaattgatca 912
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gattatcatcttgattatagtcctgcctattgtccttaaaaattgatca 284
>gnl|LJGI|TC72668 similar to UniRef100_A7QQV5 Cluster: Chromosome undetermined
scaffold_145, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_145,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (79%)
Length = 922
Score = 79.8 bits (40), Expect = 3e-14
Identities = 214/272 (78%)
Strand = Plus / Plus
Query: 460 tcttctgagtacagggacaccgtgcaacgtagatactacaccgttaccggagagaatcct 519
||||| ||||| ||||| ||||| ||||| | |||| |||||| ||||| |||||||||
Sbjct: 596 tcttcggagtatagggataccgttcaacgccgttacttcaccgtcaccggcgagaatcct 655
Query: 520 gatgagaaaaccattgatctcctcatctccactggtgaaagtgaaacattcttgcagaaa 579
||||| ||||| |||||| | | ||||| || ||||| || || || || | |||||
Sbjct: 656 gatgaaaaaacgcttgatcgcttgatctctaccggtgagagcgagacctttcttcagaag 715
Query: 580 gccatccaacaacaaggtagagccaccattatggacacaatccaagagattcaagagagg 639
|| || ||| ||||||| || | | ||| ||||||| ||| | |||||||||||||||
Sbjct: 716 gctattcaagaacaaggaaggggtagaattctggacaccatcaatgagattcaagagagg 775
Query: 640 catgactcggtgaaagagatagagaggcacctcaacgagctgcaccaagttttcatggac 699
||||| | || ||||||||||||| | | |||| ||||||||||||| ||| | |||
Sbjct: 776 catgatgctgtcaaagagatagagaagaatctcatgcagctgcaccaagtgttccttgac 835
Query: 700 atggcagtgctagtccaatcccagggtgagca 731
||| ||||||| || |||| || ||||||||
Sbjct: 836 atgacagtgctggtgcaatatcaaggtgagca 867
>gnl|LJGI|TC59242 similar to UniRef100_Q9SVC2 Cluster: Syntaxin-122; n=1; Arabidopsis
thaliana|Rep: Syntaxin-122 - Arabidopsis thaliana
(Mouse-ear cress), partial (37%)
Length = 1245
Score = 65.9 bits (33), Expect = 4e-10
Identities = 99/121 (81%)
Strand = Plus / Plus
Query: 611 tggacacaatccaagagattcaagagaggcatgactcggtgaaagagatagagaggcacc 670
||||||| ||| | |||||||||||||||||||| | || ||||||||||||| | | |
Sbjct: 417 tggacaccatcaatgagattcaagagaggcatgatgctgtcaaagagatagagaagaatc 476
Query: 671 tcaacgagctgcaccaagttttcatggacatggcagtgctagtccaatcccagggtgagc 730
||| ||||||||||||| ||| | |||||| ||||||| || |||| || |||||||
Sbjct: 477 tcatgcagctgcaccaagtgttccttgacatgacagtgctggtgcaatatcaaggtgagc 536
Query: 731 a 731
|
Sbjct: 537 a 537