Miyakogusa Predicted Gene

Lj5g3v0670560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0670560.1 tr|H6TDB5|H6TDB5_9SOLN Disease resistance protein
RGH1 OS=Solanum leptophyes x Solanum sparsipilum
P,33.52,6e-19,NB-ARC,NB-ARC; OS06G0287700 PROTEIN (FRAGMENT),NULL;
LEUCINE-RICH REPEAT-CONTAINING PROTEIN,NULL; se,gene.g59711.t1.1
         (726 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70750 similar to UniRef100_Q2R0S9 Cluster: NB-ARC dom...    66   3e-10

>gnl|LJGI|TC70750 similar to UniRef100_Q2R0S9 Cluster: NB-ARC domain containing
           protein, expressed; n=1; Oryza sativa Japonica
           Group|Rep: NB-ARC domain containing protein, expressed -
           Oryza sativa subsp. japonica (Rice), partial (10%)
          Length = 773

 Score = 65.9 bits (33), Expect = 3e-10
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 109 agaagaatcgtggaggagaaagatgttatggggtttgaccatgattttgaggttatcatc 168
           |||||||  |||||||||||||||||| ||||||||| |||||| | ||||||| |||||
Sbjct: 576 agaagaaaagtggaggagaaagatgttgtggggtttgtccatgactctgaggttgtcatc 635

            
Query: 169 a 169
           |
Sbjct: 636 a 636