Miyakogusa Predicted Gene
- Lj5g3v0586640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0586640.1 Non Chatacterized Hit- tr|I1MWG8|I1MWG8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.13,0,DUF1644,Protein of unknown function DUF1644; no
description,Zinc finger, RING/FYVE/PHD-type; FAMILY ,CUFF.53309.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81375 similar to UniRef100_A7P4Z1 Cluster: Chromosome... 841 0.0
gnl|LJGI|TC77102 470 e-132
gnl|LJGI|TC61376 214 7e-55
gnl|LJGI|TC66599 homologue to UniRef100_A7P4Z1 Cluster: Chromoso... 86 4e-16
>gnl|LJGI|TC81375 similar to UniRef100_A7P4Z1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 817
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 489 gaattttcagcaatcctccgagatcatagatgttttaagcactattcattcagaaatccc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaattttcagcaatcctccgagatcatagatgttttaagcactattcattcagaaatccc 60
Query: 549 acggggaatggttttaggagattatgtgattgaatatggggatgatgatgctagggatga 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acggggaatggttttaggagattatgtgattgaatatggggatgatgatgctagggatga 120
Query: 609 gtttgatgactttcctggagatgagggcaactggtggacctcttgtattttgtatcaggt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttgatgactttcctggagatgagggcaactggtggacctcttgtattttgtatcaggt 180
Query: 669 cttcgacaacttcagaagttctagaaacagaagaagggcaagaaatggtgatacaagaag 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcgacaacttcagaagttctagaaacagaagaagggcaagaaatggtgatacaagaag 240
Query: 729 aggcaatcgtcgtttgagttatgatacttcaaattctgatgaaggttctgtagcgtctgt 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggcaatcgtcgtttgagttatgatacttcaaattctgatgaaggttctgtagcgtctgt 300
Query: 789 ggagaatgcggattatagggtagatgagactgacgatgattttgttagcacaagtagctc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagaatgcggattatagggtagatgagactgacgatgattttgttagcacaagtagctc 360
Query: 849 ttcaaggggtagcagtggttatcgcagataccggagacgccagtcccgcttttatgacaa 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaaggggtagcagtggttatcgcagataccggagacgccagtcccgcttttatgacaa 420
Query: 909 ttag 912
||||
Sbjct: 421 ttag 424
>gnl|LJGI|TC77102
Length = 559
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 atgaatagtccaactagtgtaaacattatggaggatattcaattggagatcaattgggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgaatagtccaactagtgtaaacattatggaggatattcaattggagatcaattgggac 382
Query: 61 gatgttgcttgtcccatatgcttggattttcctcataacagtgtgcttcttcagtgttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gatgttgcttgtcccatatgcttggattttcctcataacagtgtgcttcttcagtgttca 442
Query: 121 tcttgtgataagggttgccgtgcttttgtttgtgacacaaatcaattgcactcaaattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcttgtgataagggttgccgtgcttttgtttgtgacacaaatcaattgcactcaaattgt 502
Query: 181 ttggatcgttttaaaagtgcaagtggtatgccatcatcttcggtgtctaatgcaact 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttggatcgttttaaaagtgcaagtggtatgccatcatcttcggtgtctaatgcaact 559
>gnl|LJGI|TC61376
Length = 877
Score = 214 bits (108), Expect = 7e-55
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 283 ctgacttgccctttatgtagaggtgaggtttctgggtgggttgttgtggataaagttcgc 342
|||||||| || || ||||||||||| ||| ||||||| |||||| ||||||| |||
Sbjct: 570 ctgacttgtccgttgtgtagaggtgatgttagtgggtggactgttgttgataaagctcgt 629
Query: 343 aagtatcttgatgagaagaagcgttgttgcgatgaagtgcgatgtacgttcatgggaagt 402
| | |||||||||||||||| ||| |||| ||||| | ||||||| ||||| | ||||||
Sbjct: 630 atgcatcttgatgagaagaatcgtcgttgtgatgaggagcgatgtgcgttcgtaggaagt 689
Query: 403 tacttggagctgcaaaatcatgctcaacttgaacaccctaatgcacgtccatcaaaaatt 462
|||| ||||||||| | ||||| || | | ||||| |||| | ||| || ||||||
Sbjct: 690 tactcagagctgcaagaacatgcggaagtgaaccacccgcatgctcatccgtcgaaaatt 749
Query: 463 gatcctgccaggcagcttgattgggagaattttcagcaatcctccgagatcatagatgtt 522
||||||||| | |||||||||||||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 750 gatcctgcccgacagcttgattgggaaaatttccagcagtcctctgagatcattgatgtt 809
Query: 523 ttaagcactattcattcagaaatcccacggggaatggttttaggagattatgtgattgaa 582
|| ||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||
Sbjct: 810 ttgagcactattcattcagagatcccacgaggggtggttttaggagactatgtgattgaa 869
Query: 583 tatgggga 590
||||||||
Sbjct: 870 tatgggga 877
Score = 105 bits (53), Expect = 5e-22
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 76 atatgcttggattttcctcataacagtgtgcttcttcagtgttcatcttgtgataagggt 135
||||||||||| ||||| ||||| |||||||| ||||||||||| |||| |||||||||
Sbjct: 378 atatgcttggaatttccccataatagtgtgctccttcagtgttcgtcttatgataagggg 437
Query: 136 tgccgtgcttttgtttgtgacacaaatcaattgcactcaaattgtttggatcgttttaaa 195
|| ||| | || || |||||||| |||||||||||||| || || || ||||||||||||
Sbjct: 438 tgtcgtccgttcgtgtgtgacactaatcaattgcactcgaactgctttgatcgttttaaa 497
Query: 196 a 196
|
Sbjct: 498 a 498
>gnl|LJGI|TC66599 homologue to UniRef100_A7P4Z1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 783
Score = 85.7 bits (43), Expect = 4e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 678 cttcagaagttctagaaacagaagaagggcaagaaatggtgatacaagaagaggcaatcg 737
|||||||||||||||||| |||||||| ||||| | ||||||||| || || |||||
Sbjct: 46 cttcagaagttctagaaatcgaagaaggacaagagctcatgatacaagtaggggaaatcg 105
Query: 738 tcgtttgagttatgatacttcaaattctgatgaaggttctgtagcgtctgt 788
||||| ||| ||||| | |||| ||||||||||||||||||||| |||||
Sbjct: 106 ccgtttaagtcatgatgcatcaatttctgatgaaggttctgtagcatctgt 156