Miyakogusa Predicted Gene
- Lj5g3v0108280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0108280.1 CUFF.52549.1
(1098 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64304 similar to UniRef100_A7NTA3 Cluster: Chromosome... 2177 0.0
gnl|LJGI|TC59479 similar to UniRef100_A7NTA3 Cluster: Chromosome... 607 e-173
gnl|LJGI|TC82368 similar to UniRef100_A7NTA3 Cluster: Chromosome... 194 8e-49
gnl|LJGI|TC77771 similar to UniRef100_A7NTA3 Cluster: Chromosome... 172 3e-42
>gnl|LJGI|TC64304 similar to UniRef100_A7NTA3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1505
Score = 2177 bits (1098), Expect = 0.0
Identities = 1098/1098 (100%)
Strand = Plus / Plus
Query: 1 atgggagcagaacccctgtccaccaccaccacagaccaccaagtggtaccattggttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atgggagcagaacccctgtccaccaccaccacagaccaccaagtggtaccattggttctc 271
Query: 61 gggcttgcaccttcagccctcgtcgatcacgtcgctcgcgtcggtggggccttcctcgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gggcttgcaccttcagccctcgtcgatcacgtcgctcgcgtcggtggggccttcctcgag 331
Query: 121 caaattcctggtgaacaaggtggctccattcctgttgcgcttgaagagcttgaacatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caaattcctggtgaacaaggtggctccattcctgttgcgcttgaagagcttgaacatata 391
Query: 181 ctgagggaggtcaaagctcatgttctctcatgccctgatgagacttctaccgtcaagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctgagggaggtcaaagctcatgttctctcatgccctgatgagacttctaccgtcaagacc 451
Query: 241 atggctggaggcagtgttacgaatacaattagagggctgagtggtggatttgggatttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atggctggaggcagtgttacgaatacaattagagggctgagtggtggatttgggatttca 511
Query: 301 agtggagtcattggggcgtgtggggatgatgagcaggggcagctatttgtccataacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agtggagtcattggggcgtgtggggatgatgagcaggggcagctatttgtccataacatg 571
Query: 361 gtcttcaatggagtggaactctcaaggctcaggaagaagaaaggacacacagcacagtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtcttcaatggagtggaactctcaaggctcaggaagaagaaaggacacacagcacagtgt 631
Query: 421 gtgtgcttggttgatgccttgggaaaccgtaccatgcgaccctgtctctcaagtgctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtgtgcttggttgatgccttgggaaaccgtaccatgcgaccctgtctctcaagtgctgtc 691
Query: 481 aaagttcaggcagaagaattgacctcagaggatttcaagggctctaagtggttggtgttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aaagttcaggcagaagaattgacctcagaggatttcaagggctctaagtggttggtgttg 751
Query: 541 agattttcagcatttaatttggaagttactcaaaaagccattcttttagccaaacaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 agattttcagcatttaatttggaagttactcaaaaagccattcttttagccaaacaggaa 811
Query: 601 ggtcttcttgtttccttggatttggccagttttgagatggttaggaattttaaacaacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ggtcttcttgtttccttggatttggccagttttgagatggttaggaattttaaacaacca 871
Query: 661 ctgctgaagctacttgagtctggaaacatagatctttgctttgccaatgaagatgaggca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ctgctgaagctacttgagtctggaaacatagatctttgctttgccaatgaagatgaggca 931
Query: 721 actgagcttctaaggggagaacagaatgctgatcctgtagctgctgtagaatatctagcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 actgagcttctaaggggagaacagaatgctgatcctgtagctgctgtagaatatctagcc 991
Query: 781 aaatactgcaaatgggctgtagtaacattaggttctaatggatgcattgctaaacatgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 aaatactgcaaatgggctgtagtaacattaggttctaatggatgcattgctaaacatgga 1051
Query: 841 aacgaggttgtacaagtccctgccataggagaatcaaaggcaagtgatgctacaggagct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 aacgaggttgtacaagtccctgccataggagaatcaaaggcaagtgatgctacaggagct 1111
Query: 901 ggggatctttttgcaagtggattcttgtatggggtgattaaaggtctgtcacttgaagaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 ggggatctttttgcaagtggattcttgtatggggtgattaaaggtctgtcacttgaagaa 1171
Query: 961 tgctgcaaagtaggctcatgcagtggtggggctgtgattcgctctcttggtggtgaagtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 tgctgcaaagtaggctcatgcagtggtggggctgtgattcgctctcttggtggtgaagtg 1231
Query: 1021 acattagagaatcggcagtggatgtacaagcacatgcagttaaagggtcttctcacgcct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 acattagagaatcggcagtggatgtacaagcacatgcagttaaagggtcttctcacgcct 1291
Query: 1081 gatacatccaaatgagta 1098
||||||||||||||||||
Sbjct: 1292 gatacatccaaatgagta 1309
>gnl|LJGI|TC59479 similar to UniRef100_A7NTA3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1310
Score = 607 bits (306), Expect = e-173
Identities = 708/842 (84%)
Strand = Plus / Plus
Query: 242 tggctggaggcagtgttacgaatacaattagagggctgagtggtggatttgggatttcaa 301
||||||| || |||||| | ||||| ||| |||| ||||| |||| ||||| ||||| |
Sbjct: 302 tggctggtggtagtgttgccaatacgattcgaggactgagcagtggttttggaatttcca 361
Query: 302 gtggagtcattggggcgtgtggggatgatgagcaggggcagctatttgtccataacatgg 361
||||| | |||||||| ||||| ||||||||||| || | | ||||| ||||||||
Sbjct: 362 gtggaattattggggcttgtggtgatgatgagcaaggttacttgtttgttgataacatgt 421
Query: 362 tcttcaatggagtggaactctcaaggctcaggaagaagaaaggacacacagcacagtgtg 421
|| ||||| || || ||||| || | | ||||||||||||||||| ||||||||||
Sbjct: 422 cctccaatgctgttgacctctccagaattcgtaagaagaaaggacacactgcacagtgtg 481
Query: 422 tgtgcttggttgatgccttgggaaaccgtaccatgcgaccctgtctctcaagtgctgtca 481
| ||||||||||||||||| || |||||||| ||||| ||||||||||||| ||||||||
Sbjct: 482 tttgcttggttgatgcctttggtaaccgtactatgcggccctgtctctcaaatgctgtca 541
Query: 482 aagttcaggcagaagaattgacctcagaggatttcaagggctctaagtggttggtgttga 541
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 542 aagttcaggcagaagaattgaagaaagaggatttcaagggctccaagtggttggtgttga 601
Query: 542 gattttcagcatttaatttggaagttactcaaaaagccattcttttagccaaacaggaag 601
||| | | | ||||||||||||| |||| ||| |||||||||||||| |||||||
Sbjct: 602 gatacgcgatactgaatttggaagttattcaagcagctattcttttagccaagcaggaag 661
Query: 602 gtcttcttgtttccttggatttggccagttttgagatggttaggaattttaaacaaccac 661
| |||||||||||||||||| ||||||| ||||||||||| ||||| ||||||| |||||
Sbjct: 662 ggcttcttgtttccttggatctggccagctttgagatggtcaggaactttaaactaccac 721
Query: 662 tgctgaagctacttgagtctggaaacatagatctttgctttgccaatgaagatgaggcaa 721
| ||||| |||| || ||||| |||||||| || ||||||||||| || |||||||||
Sbjct: 722 tcatgaagttactggaatctgggaacatagacctctgctttgccaacgaggatgaggcag 781
Query: 722 ctgagcttctaaggggagaacagaatgctgatcctgtagctgctgtagaatatctagcca 781
|||| ||| ||||||| ||||||||||||||||| ||||||| ||||| | ||| ||||
Sbjct: 782 ctgaacttataaggggcgaacagaatgctgatccaatagctgcagtagagtttcttgcca 841
Query: 782 aatactgcaaatgggctgtagtaacattaggttctaatggatgcattgctaaacatggaa 841
||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||||| |
Sbjct: 842 aatactgtcaatgggctgtggtaacattaggctctgatggatgcattgctaaacatggga 901
Query: 842 acgaggttgtacaagtccctgccataggagaatcaaaggcaagtgatgctacaggagctg 901
| ||| | | | || || |||||||| ||| |||| |||| ||||||||| ||||| |
Sbjct: 902 aggagatgatccgggttccggccataggcgaagcaaaagcaactgatgctaccggagcag 961
Query: 902 gggatctttttgcaagtggattcttgtatggggtgattaaaggtctgtcacttgaagaat 961
|||| |||||||||||||||||||||||||| || | || ||| ||||||| |||||||
Sbjct: 962 gggacctttttgcaagtggattcttgtatggattggtcaagggtttgtcactagaagaat 1021
Query: 962 gctgcaaagtaggctcatgcagtggtggggctgtgattcgctctcttggtggtgaagtga 1021
|||||||| ||||| ||||||||||||| |||| | || |||||||| ||||| ||||
Sbjct: 1022 gctgcaaaataggcacatgcagtggtggatctgttgtccgatctcttggcggtgaggtga 1081
Query: 1022 cattagagaatcggcagtggatgtacaagcacatgcagttaaagggtcttctcacgcctg 1081
|| |||||||| |||| |||||||||||||| |||||| |||||||||||| | ||||||
Sbjct: 1082 cagtagagaataggcaatggatgtacaagcagatgcagctaaagggtcttcccccgcctg 1141
Query: 1082 at 1083
||
Sbjct: 1142 at 1143
>gnl|LJGI|TC82368 similar to UniRef100_A7NTA3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 436
Score = 194 bits (98), Expect = 8e-49
Identities = 191/222 (86%)
Strand = Plus / Minus
Query: 862 gccataggagaatcaaaggcaagtgatgctacaggagctggggatctttttgcaagtgga 921
|||||||| ||| |||| |||| ||||||||| ||||| ||||| |||||||||||||||
Sbjct: 361 gccataggcgaagcaaaagcaactgatgctaccggagcaggggacctttttgcaagtgga 302
Query: 922 ttcttgtatggggtgattaaaggtctgtcacttgaagaatgctgcaaagtaggctcatgc 981
||||||||||| || | || ||| ||||||| ||||||||||||||| ||||| |||||
Sbjct: 301 ttcttgtatggattggtcaagggtttgtcactagaagaatgctgcaaaataggcacatgc 242
Query: 982 agtggtggggctgtgattcgctctcttggtggtgaagtgacattagagaatcggcagtgg 1041
|||||||| |||| | || |||||||| ||||| |||||| |||||||| |||| |||
Sbjct: 241 agtggtggatctgttgtccgatctcttggcggtgaggtgacagtagagaataggcaatgg 182
Query: 1042 atgtacaagcacatgcagttaaagggtcttctcacgcctgat 1083
||||||||||| |||||| |||||||||||| | ||||||||
Sbjct: 181 atgtacaagcaaatgcagctaaagggtcttcccccgcctgat 140
>gnl|LJGI|TC77771 similar to UniRef100_A7NTA3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 832
Score = 172 bits (87), Expect = 3e-42
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 394 aagaagaaaggacacacagcacagtgtgtgtgcttggttgatgccttgggaaaccgtacc 453
||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 467 aagaagaaaggacacactgcacagtgtgtttgcttggttgatgcctttggtaaccgtact 526
Query: 454 atgcgaccctgtctctcaagtgctgtcaaagttcaggcagaagaattgacctcagaggat 513
||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 527 atgcggccctgtctctcaaatgctgtcaaagttcaggcagaagaattgaagaaagaggat 586
Query: 514 ttcaagggctc 524
|||||||||||
Sbjct: 587 ttcaagggctc 597
Score = 119 bits (60), Expect = 4e-26
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 556 aatttggaagttactcaaaaagccattcttttagccaaacaggaaggtcttcttgtttcc 615
||||||||||||| |||| ||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 701 aatttggaagttattcaagcagctattcttttagccaagcaggaagggcttcttgtttcc 760
Query: 616 ttggatttggccagttttgagatggttaggaattttaaacaaccactgctgaagctactt 675
|||||| ||||||| ||||||||||| ||||| ||| ||| |||||| ||||| ||||
Sbjct: 761 ttggatctggccagctttgagatggtcaggaacttttaactaccactcatgaagttactg 820
Query: 676 gagtctgg 683
|| |||||
Sbjct: 821 gaatctgg 828