Miyakogusa Predicted Gene
- Lj5g3v0091590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0091590.1 Non Chatacterized Hit- tr|D8RPH8|D8RPH8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.67,0.000000000003,seg,NULL,gene.g58321.t1.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78322 weakly similar to UniRef100_A7QWV1 Cluster: Chr... 680 0.0
gnl|LJGI|TC79127 similar to UniRef100_A6F347 Cluster: GGDEF doma... 317 4e-86
gnl|LJGI|BP031248 weakly similar to UniRef100_A7QWV1 Cluster: Ch... 161 6e-39
>gnl|LJGI|TC78322 weakly similar to UniRef100_A7QWV1 Cluster: Chromosome chr13
scaffold_210, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_210, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 478
Score = 680 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Plus
Query: 233 agaatgtgtatggtttgagcagagttgtggcggttctgggtctggttcagcttggtcttg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatgtgtatggtttgagcagagttgtggcggttctgggtctggttcagcttggtcttg 60
Query: 293 gagcttggatcacctacgtgacgagatcttccccgatcactgaggtttcggtgcagagtt 352
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gagcttggatcacctacgtgacgagatcttccccgatccctgaggtttcggtgcagagtt 120
Query: 353 ttgtggcgtttgcgttgccgttttctctggcgtttatgcttcgccagtgtttgaagccga 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtggcgtttgcgttgccgttttctctggcgtttatgcttcgccagtgtttgaagccga 180
Query: 413 tgcatttcttgaagaagatggaggagcaaggtaggttgcagattctgacgctgactatgc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcatttcttgaagaagatggaggagcaaggtaggttgcagattctgacgctgactatgc 240
Query: 473 aagttgcgaagcagttgaatgctttctttgtgagggttcgtggggtttcgtttctttgca 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagttgcgaagcagttgaatgctttctttgtgagggttcgtggggtttcgtttctttgca 300
Query: 533 ttgttggtatgtctgctgggttggtttttgctgtgttttcaagatga 579
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgttggtatgtctgctgggttggtttttgctgtgttttcaagatga 347
>gnl|LJGI|TC79127 similar to UniRef100_A6F347 Cluster: GGDEF domain-like protein;
n=1; Marinobacter algicola DG893|Rep: GGDEF domain-like
protein - Marinobacter algicola DG893, partial (3%)
Length = 477
Score = 317 bits (160), Expect = 4e-86
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 1 atgaacccttttgttccagtagcaaaacccaggtttttctcaaccccaaatccatcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgaacccttttgttccagtagcaaaacccaggtttttctcaaccccaaatccatcatca 377
Query: 61 tcatcagactcatcttcagaatctgagaatacccagaagccaaatcaaaccgaaaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcatcagactcatcttcagaatctgagaatacccagaagccaaatcaaaccgaaaatcca 437
Query: 121 tacccgagtcaaaacccgcatttcaagcaccaggagatcg 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tacccgagtcaaaacccgcatttcaagcaccaggagatcg 477
>gnl|LJGI|BP031248 weakly similar to UniRef100_A7QWV1 Cluster: Chromosome chr13
scaffold_210, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_210, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 305
Score = 161 bits (81), Expect = 6e-39
Identities = 90/93 (96%)
Strand = Plus / Minus
Query: 487 ttgaatgctttctttgtgagggttcgtggggtttcgtttctttgcattgttggtatgtct 546
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 305 ttgaatgctttctttgtgagggttcgtgggttttcgtttcttcgcattgttggtatgtct 246
Query: 547 gctgggttggtttttgctgtgttttcaagatga 579
||||||||||||||| |||||||||||||||||
Sbjct: 245 gctgggttggttttttctgtgttttcaagatga 213