Miyakogusa Predicted Gene
- Lj5g3v0069820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0069820.1 Non Chatacterized Hit- tr|I1MXS7|I1MXS7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65,0,seg,NULL;
myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF ,Myb domain, plants;
Myb_DNA-binding,SAN,CUFF.52470.1
(1011 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV769271 345 3e-94
gnl|LJGI|AV408515 similar to UniRef100_A0AKJ5 Cluster: TetR prot... 145 6e-34
gnl|LJGI|TC80735 similar to UniRef100_A7PZ25 Cluster: Chromosome... 84 2e-15
>gnl|LJGI|AV769271
Length = 439
Score = 345 bits (174), Expect = 3e-94
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 838 aatgagcataattatgctggcatgtcaaattgcatgaaggagggtttggattctatccct 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aatgagcataattatgctggcatgtcaaattgcatgaaggagggtttggattctatccct 380
Query: 898 ttgtcacgttcagagactatgattgacttagaattcacccttggaaggcccacttggcaa 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttgtcacgttcagagactatgattgacttagaattcacccttggaaggcccacttggcaa 320
Query: 958 acagagcatgccgaaccatcaagaagagagttaactcttctcaagtgttaaata 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 acagagcatgccgaaccatcaagaagagagttaactcttctcaagtgttaaata 266
>gnl|LJGI|AV408515 similar to UniRef100_A0AKJ5 Cluster: TetR protein; n=1; Listeria
welshimeri serovar 6b str. SLCC5334|Rep: TetR protein -
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM
20650 /SLCC5334), partial (9%)
Length = 432
Score = 145 bits (73), Expect = 6e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 atgtctatctctaattcacaccacccagtaatgcaaaccttgttctcaccattttcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgtctatctctaattcacaccacccagtaatgcaaaccttgttctcaccattttcagaa 419
Query: 61 ccagacctctctt 73
|||||||||||||
Sbjct: 420 ccagacctctctt 432
>gnl|LJGI|TC80735 similar to UniRef100_A7PZ25 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 854
Score = 83.8 bits (42), Expect = 2e-15
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 460 tttgttcatgctgttcagctacttggtggtcatgaaagagcaacaccaaagtctgtgttg 519
||||||||||||||| |||| ||||| || |||||||| || || |||||||| || ||
Sbjct: 89 tttgttcatgctgttgagcttcttgggggccatgaaagggctactccaaagtcagttctg 148
Query: 520 gagctaatgaatgtgaaggatctaacccttgcacacgtcaagagtcacttgcagatgtat 579
||| | ||| |||| || ||||||| ||||| || |||||||| |||||||||||||||
Sbjct: 149 gagttgatggatgttaaagatctaaaacttgctcatgtcaagagccacttgcagatgtat 208
Query: 580 ag 581
||
Sbjct: 209 ag 210