Miyakogusa Predicted Gene
- Lj4g3v3114100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3114100.1 Non Chatacterized Hit- tr|I1KQG4|I1KQG4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.52,0,seg,NULL;
matE: MATE efflux family protein,Multi antimicrobial extrusion
protein; MatE,Multi antimic,CUFF.52378.1
(1191 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom... 716 0.0
gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome... 281 5e-75
gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosom... 236 3e-61
gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosom... 186 2e-46
gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome... 182 3e-45
>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 528
Score = 716 bits (361), Expect = 0.0
Identities = 361/361 (100%)
Strand = Plus / Plus
Query: 1 atggccagtgccttggataccttttgtgggcagtcatatggagcaaagcagcacagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atggccagtgccttggataccttttgtgggcagtcatatggagcaaagcagcacagaatg 227
Query: 61 ttaggcatacacatgcaaagggccatgctcactcttgtgattgtcagcatacccttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ttaggcatacacatgcaaagggccatgctcactcttgtgattgtcagcatacccttagca 287
Query: 121 atcatttgggcaaacacaaggtccattctggttttctttggccaagatcctgaaatatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atcatttgggcaaacacaaggtccattctggttttctttggccaagatcctgaaatatct 347
Query: 181 gcagaagcagggaaatatgctcagttaatggttccaagcctttttgcctatggtcttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gcagaagcagggaaatatgctcagttaatggttccaagcctttttgcctatggtcttctt 407
Query: 241 caatgtctaaacagattcttacaaacacaaaatattgtattgccaactatgttcagctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 caatgtctaaacagattcttacaaacacaaaatattgtattgccaactatgttcagctct 467
Query: 301 ggagttactactttgctacatcttgttgtgtgttggattttggtattcaaatgcggttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ggagttactactttgctacatcttgttgtgtgttggattttggtattcaaatgcggttta 527
Query: 361 g 361
|
Sbjct: 528 g 528
>gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 895
Score = 281 bits (142), Expect = 5e-75
Identities = 271/314 (86%)
Strand = Plus / Plus
Query: 826 tatagtaatgaagcagaagtggtcgaatatgtagcaatcatgttgccaattcttgcagta 885
||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| |
Sbjct: 4 tatagtaatgaagaagaagtggtcaaatatgtagcaactatgttgccaattcttgcagca 63
Query: 886 tccaacttcttggatggatttcagtgtgtactttcaggcacagttagaggatgtggtcgg 945
|||||||| |||||||| | || | ||| |||||||||| | ||||||||| ||| ||
Sbjct: 64 tccaactttctggatggaatccaatctgttctttcaggcaatgctagaggatgcggttgg 123
Query: 946 cagaaaattggtgcattcatcaatttaggctcttattatctagttgggattccatcagct 1005
||||||||||||||||| | ||| | || || || ||| ||||||| |||||| |||||
Sbjct: 124 cagaaaattggtgcatttgtgaatctggggtcgtactatatagttggaattccagcagct 183
Query: 1006 atcctgctagcttttgtattgaatattggagggaaggggctctggctggggatcatttgt 1065
||| || |||||||||||||| ||||||||||||||||||| |||||||| ||||| |||
Sbjct: 184 atcgtgttagcttttgtattggatattggagggaaggggctgtggctgggaatcatatgt 243
Query: 1066 gcactcattgttcaagtattatctctattgatcatcaccttacgtactgattgggagcaa 1125
|||||||||||||||||||| || ||| |||| || || |||| |||||||||||| ||
Sbjct: 244 gcactcattgttcaagtattttccctaatgattattactatacgaactgattgggagaaa 303
Query: 1126 gaggcaaagaaggc 1139
||||||||||||||
Sbjct: 304 gaggcaaagaaggc 317
>gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 782
Score = 236 bits (119), Expect = 3e-61
Identities = 279/331 (84%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 809 atatttgggcctacgcctatagtaatgaagcagaagtggtcgaatatgtagcaatcatgt 868
||||||||| || || ||||||||||||| |||||||||| ||||||| |||| |||
Sbjct: 126 atatttggggttatgcttatagtaatgaagaagaagtggtcaaatatgttgcaactatga 185
Query: 869 tgccaattcttgcagtatccaacttcttggatggatttcagtgtgtactttcaggcacag 928
||||||||||||||| ||||||||| |||| ||| | || | ||| |||||||||| |
Sbjct: 186 tgccaattcttgcagcatccaactttctggacggaatccaatctgttctttcaggcaatg 245
Query: 929 ttagaggatgtggtcggcagaaaattggtgcattcatcaatttaggctcttattatctag 988
||||||||| ||| ||||||||||||||||||| | ||| | || || || ||| |||
Sbjct: 246 ctagaggatgcggttggcagaaaattggtgcatttgtgaatctggggtcgtactatatag 305
Query: 989 ttgggattccatcagctatcctgctagcttttgtattgaatattggagggaaggggctct 1048
|||| |||||| |||||||| || |||||||||||||| ||||||||||||| ||||| |
Sbjct: 306 ttggaattccagcagctatcgtgttagcttttgtattggatattggagggaa-gggctgt 364
Query: 1049 ggctggggatcatttgtgcactcattgttcaagtattatctctattgatcatcaccttac 1108
||||||| ||||| ||||||||||||||||||||||| || ||| |||| || || ||
Sbjct: 365 ggctgggaatcatatgtgcactcattgttcaagtattttccctaatgattattactatat 424
Query: 1109 gtactgattgggagcaagaggcaaagaaggc 1139
| |||||||||||| ||||||||||||||||
Sbjct: 425 ggactgattgggagaaagaggcaaagaaggc 455
>gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 483
Score = 186 bits (94), Expect = 2e-46
Identities = 175/202 (86%)
Strand = Plus / Minus
Query: 931 agaggatgtggtcggcagaaaattggtgcattcatcaatttaggctcttattatctagtt 990
|||||||||||| |||||||||||||||||| || ||| | || || || ||| |||||
Sbjct: 252 agaggatgtggtttgcagaaaattggtgcatttattaatctggggtcatactatttagtt 193
Query: 991 gggattccatcagctatcctgctagcttttgtattgaatattggagggaaggggctctgg 1050
|| ||||| | |||||| | |||||||||||||| ||||||||||||||||||| |||
Sbjct: 192 ggaattccgttagctatggtcttagcttttgtattgcatattggagggaaggggctgtgg 133
Query: 1051 ctggggatcatttgtgcactcattgttcaagtattatctctattgatcatcaccttacgt 1110
||||||||||| ||||||||||||||||||||||| |||||| ||||||| || || |||
Sbjct: 132 ctggggatcatatgtgcactcattgttcaagtattttctctaatgatcattactttgcgt 73
Query: 1111 actgattgggagcaagaggcaa 1132
| |||||||||| |||||||||
Sbjct: 72 attgattgggagaaagaggcaa 51
>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 182 bits (92), Expect = 3e-45
Identities = 221/264 (83%)
Strand = Plus / Plus
Query: 1 atggccagtgccttggataccttttgtgggcagtcatatggagcaaagcagcacagaatg 60
||||| |||||||| |||||||| ||||| || |||||||| ||||||||| || | ||
Sbjct: 530 atggcaagtgccttagataccttatgtggtcaatcatatggggcaaagcagtaccgcttg 589
Query: 61 ttaggcatacacatgcaaagggccatgctcactcttgtgattgtcagcatacccttagca 120
|||||||| |||||||| ||||| ||| | | |||| || |||||||||| || | ||
Sbjct: 590 ttaggcattcacatgcagagggctatgttgattcttatggttgtcagcattccgcttgcg 649
Query: 121 atcatttgggcaaacacaaggtccattctggttttctttggccaagatcctgaaatatct 180
|| ||||||||||||||| | ||||| || ||||| |||||||||||||||| ||||||
Sbjct: 650 attatttgggcaaacacaggatccatcctcattttccttggccaagatcctgagatatct 709
Query: 181 gcagaagcagggaaatatgctcagttaatggttccaagcctttttgcctatggtcttctt 240
|||| ||| ||| |||||||| || ||||||||||| ||||||||| |||||||||||
Sbjct: 710 gcagcagctggggaatatgctaagataatggttccatgcctttttggttatggtcttctg 769
Query: 241 caatgtctaaacagattcttacaa 264
||||| || || ||||||||||||
Sbjct: 770 caatgcctcaatagattcttacaa 793