Miyakogusa Predicted Gene
- Lj4g3v3015060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3015060.1 Non Chatacterized Hit- tr|A9NL71|A9NL71_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,58.33,3e-17,seg,NULL; Tom7,Mitochondrial outer membrane translocase
complex, subunit Tom7,CUFF.52123.1
(219 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71017 similar to UniRef100_A7Q4C6 Cluster: Chromosome... 434 e-122
gnl|LJGI|BW600178 similar to UniRef100_A7Q4C6 Cluster: Chromosom... 329 4e-90
gnl|LJGI|BP048208 212 6e-55
>gnl|LJGI|TC71017 similar to UniRef100_A7Q4C6 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 563
Score = 434 bits (219), Expect = e-122
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcgaggggtgtttctctgaaggcgaaaggcaagagctcgaaggggaaggcatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggcgtcgaggggtgtttctctgaaggcgaaaggcaagagctcgaaggggaaggcatcg 169
Query: 61 gaggagaaaacagcgtgcgagtgcctgaaggagtggaccacatggacgatgaggaaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gaggagaaaacagcgtgcgagtgcctgaaggagtggaccacatggacgatgaggaaagcc 229
Query: 121 aaagtggtgactcactacggattcatccctttgatcatcatcattggtatgaactctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aaagtggtgactcactacggattcatccctttgatcatcatcattggtatgaactctgac 289
Query: 181 cccaagccccagctttcccagcttctcagccccgtctga 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cccaagccccagctttcccagcttctcagccccgtctga 328
>gnl|LJGI|BW600178 similar to UniRef100_A7Q4C6 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 434
Score = 329 bits (166), Expect = 4e-90
Identities = 175/178 (98%)
Strand = Plus / Plus
Query: 42 ctcgaaggggaaggcatcggaggagaaaacagcgtgcgagtgcctgaaggagtggaccac 101
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 43 ctcgaatgggaaggcatcggaggagaaaacagcgtgcgagtgcctgagggagtggaccgc 102
Query: 102 atggacgatgaggaaagccaaagtggtgactcactacggattcatccctttgatcatcat 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atggacgatgaggaaagccaaagtggtgactcactacggattcatccctttgatcatcat 162
Query: 162 cattggtatgaactctgaccccaagccccagctttcccagcttctcagccccgtctga 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cattggtatgaactctgaccccaagccccagctttcccagcttctcagccccgtctga 220
>gnl|LJGI|BP048208
Length = 470
Score = 212 bits (107), Expect = 6e-55
Identities = 186/199 (93%), Gaps = 10/199 (5%)
Strand = Plus / Minus
Query: 3 ggcgtcgaggggtgtttctctgaaggcgaaaggcaagagctcgaaggggaaggcatcgga 62
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 446 ggcgtcgaggggtgtttctctgaaggcgaacggcaagagctcgaaggggaaggcatcgga 387
Query: 63 ggagaaaacagc-gtgcgagt-gcctgaaggagtggaccacatggacgatgaggaaagc- 119
|||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggagaaaacagcagtgcgagtcgcctgaaggagtggaccacatggacgatgaggaaagca 327
Query: 120 caaagtggtgactc-actacgg-attcatccct-ttgatcatca-tcatt-ggtatgaa- 173
|| ||||||||||| ||||||| |||||||||| | |||||||| ||||| ||||||||
Sbjct: 326 catagtggtgactcaactacggaattcatccctctagatcatcagtcattaggtatgaat 267
Query: 174 ctctgac-cccaagcccca 191
||||||| |||||||||||
Sbjct: 266 ctctgacacccaagcccca 248