Miyakogusa Predicted Gene
- Lj4g3v3003880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3003880.1 Non Chatacterized Hit- tr|I1IZD3|I1IZD3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,25.49,2e-18,seg,NULL; LRR_6,NULL; RNI-like,NULL; L
domain-like,NULL; LRR,Leucine-rich repeat; Leucine-rich
repea,CUFF.52022.1
(1743 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58266 weakly similar to UniRef100_A7QUA7 Cluster: Chr... 1358 0.0
gnl|LJGI|AV411649 weakly similar to UniRef100_A7QUA7 Cluster: Ch... 710 0.0
gnl|LJGI|TC62823 weakly similar to UniRef100_A7QUA7 Cluster: Chr... 644 0.0
gnl|LJGI|TC74673 444 e-124
gnl|LJGI|AV778125 similar to UniRef100_Q0DJZ0 Cluster: Os05g0212... 232 6e-60
>gnl|LJGI|TC58266 weakly similar to UniRef100_A7QUA7 Cluster: Chromosome chr2
scaffold_176, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_176, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (33%)
Length = 940
Score = 1358 bits (685), Expect = 0.0
Identities = 685/685 (100%)
Strand = Plus / Plus
Query: 179 aggttttcaaacgcagtgccgaagaggttgatctgagaggcgaaaaccatgtcgatgcac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aggttttcaaacgcagtgccgaagaggttgatctgagaggcgaaaaccatgtcgatgcac 315
Query: 239 agtggatggcatatttaggagcatttcgctacctgcgctacttgaacgttgccgattgcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agtggatggcatatttaggagcatttcgctacctgcgctacttgaacgttgccgattgcc 375
Query: 299 atcgaatcaccaattcagctctttggcctctcacaggaatgactagcttgaaggagttgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atcgaatcaccaattcagctctttggcctctcacaggaatgactagcttgaaggagttgg 435
Query: 359 atctctctagatgctccaaggttgatgatggtgcaattgaccatattctttcaattccta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atctctctagatgctccaaggttgatgatggtgcaattgaccatattctttcaattccta 495
Query: 419 atttggagaagttgcacatttcagaaacaagtgtgactgccaaaggggtcaagcttctcg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atttggagaagttgcacatttcagaaacaagtgtgactgccaaaggggtcaagcttctcg 555
Query: 479 cctctcttgggaacttgtctcatcttgatttgggaggcttgcctgtggatgacatcacat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cctctcttgggaacttgtctcatcttgatttgggaggcttgcctgtggatgacatcacat 615
Query: 539 taacttcgttacaggtgctgaagaagctacaatatattgatctctggggtagtgaaatat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 taacttcgttacaggtgctgaagaagctacaatatattgatctctggggtagtgaaatat 675
Query: 599 caaatgaaggtgctgttgttcttaatctatttccgaggttaacccatctaaatcttgctt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 caaatgaaggtgctgttgttcttaatctatttccgaggttaacccatctaaatcttgctt 735
Query: 659 ggacgaatgtgacaaaattgcctaatttatcatctcttgagttcctgaacatgagtaatt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggacgaatgtgacaaaattgcctaatttatcatctcttgagttcctgaacatgagtaatt 795
Query: 719 gtactatcgactctatacttcaagatggcaaatctccgttggcaaagcttattctctctg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gtactatcgactctatacttcaagatggcaaatctccgttggcaaagcttattctctctg 855
Query: 779 ggactacattcctgaatgaagctgaagccttattacatataaatacaaattttctgtcct 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ggactacattcctgaatgaagctgaagccttattacatataaatacaaattttctgtcct 915
Query: 839 atctggatgtagcccactctggcct 863
|||||||||||||||||||||||||
Sbjct: 916 atctggatgtagcccactctggcct 940
Score = 212 bits (107), Expect = 6e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 atgatgaacagcgaaagcggattgattaagctctgcatcgatgcggcgtgtgacagcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgatgaacagcgaaagcggattgattaagctctgcatcgatgcggcgtgtgacagcaaa 137
Query: 61 gaaagcatcgacagatggcgcctacagaaacgctctctcgatcgctt 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gaaagcatcgacagatggcgcctacagaaacgctctctcgatcgctt 184
>gnl|LJGI|AV411649 weakly similar to UniRef100_A7QUA7 Cluster: Chromosome chr2
scaffold_176, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_176, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 358
Score = 710 bits (358), Expect = 0.0
Identities = 358/358 (100%)
Strand = Plus / Plus
Query: 918 ctcgtgtatgagcgatgattcagttgagatggtcgcatgcattggtggaaacttgaaaag 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgtgtatgagcgatgattcagttgagatggtcgcatgcattggtggaaacttgaaaag 60
Query: 978 tctgaatctgagttgtactgcagtcagctctgctggactaggggttttagctggacatgt 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgaatctgagttgtactgcagtcagctctgctggactaggggttttagctggacatgt 120
Query: 1038 gcccaatcttgaaattctgtctctctctcagacaccagtggatgatactgccatcccatt 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcccaatcttgaaattctgtctctctctcagacaccagtggatgatactgccatcccatt 180
Query: 1098 tataggcatgatgccttcattgaaggtggttgacctgagcaagacaaacattacaggttt 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tataggcatgatgccttcattgaaggtggttgacctgagcaagacaaacattacaggttt 240
Query: 1158 tttgccccagggggacagggacatctcattctctctgacggctctacaggaccttaaaca 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgccccagggggacagggacatctcattctctctgacggctctacaggaccttaaaca 300
Query: 1218 attagaaagcttgaatatggaaggcacaccagttgggggctcagctttgtacccttta 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attagaaagcttgaatatggaaggcacaccagttgggggctcagctttgtacccttta 358
>gnl|LJGI|TC62823 weakly similar to UniRef100_A7QUA7 Cluster: Chromosome chr2
scaffold_176, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_176, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 927
Score = 644 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Plus
Query: 1383 ggatgcactattgacaaattatgggcttgatatgtttgaggctcctgaaactctgaaatt 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcactattgacaaattatgggcttgatatgtttgaggctcctgaaactctgaaatt 60
Query: 1443 gctggatatcagaggttgttggctcttaactaaagacactatattgtcattctgcagaaa 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctggatatcagaggttgttggctcttaactaaagacactatattgtcattctgcagaaa 120
Query: 1503 ttatccacaaattgaagtaaggcatgaacttcttactctgcctcctttcgaggaaaatgc 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttatccacaaattgaagtaaggcatgaacttcttactctgcctcctttcgaggaaaatgc 180
Query: 1563 acttcattattcctctccatctcaatcaacttcaaggactcagcaatctgccaagaagaa 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttcattattcctctccatctcaatcaacttcaaggactcagcaatctgccaagaagaa 240
Query: 1623 agagcattcctctccgtctcaattaacttcaaggactatgcaagcatctaagacgaaaga 1682
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 agagcattcctctccgtctcaattaacttcaaggactatgcaagcatttaagacgaaaga 300
Query: 1683 gggaatatccatatctccgtgttttatag 1711
|||||||||||||||||||||||||||||
Sbjct: 301 gggaatatccatatctccgtgttttatag 329
>gnl|LJGI|TC74673
Length = 553
Score = 444 bits (224), Expect = e-124
Identities = 224/224 (100%)
Strand = Plus / Plus
Query: 1520 taaggcatgaacttcttactctgcctcctttcgaggaaaatgcacttcattattcctctc 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaggcatgaacttcttactctgcctcctttcgaggaaaatgcacttcattattcctctc 60
Query: 1580 catctcaatcaacttcaaggactcagcaatctgccaagaagaaagagcattcctctccgt 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catctcaatcaacttcaaggactcagcaatctgccaagaagaaagagcattcctctccgt 120
Query: 1640 ctcaattaacttcaaggactatgcaagcatctaagacgaaagagggaatatccatatctc 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaattaacttcaaggactatgcaagcatctaagacgaaagagggaatatccatatctc 180
Query: 1700 cgtgttttataggtaattgccaatcacctttctatctttaaatt 1743
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtgttttataggtaattgccaatcacctttctatctttaaatt 224
>gnl|LJGI|AV778125 similar to UniRef100_Q0DJZ0 Cluster: Os05g0212200 protein; n=1;
Oryza sativa Japonica Group|Rep: Os05g0212200 protein -
Oryza sativa subsp. japonica (Rice), partial (12%)
Length = 588
Score = 232 bits (117), Expect = 6e-60
Identities = 126/129 (97%)
Strand = Plus / Plus
Query: 178 gaggttttcaaacgcagtgccgaagaggttgatctgagaggcgaaaaccatgtcgatgca 237
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 460 gaggttttcaaacgcagtgccgaagaggtggatctgagaggcgaaaaccatgtcgatgca 519
Query: 238 cagtggatggcatatttaggagcatttcgctacctgcgctacttgaacgttgccgattgc 297
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 520 cagtggatggcatatttaggagcatttcgctacctgcgctacttgaacgttggcgattgg 579
Query: 298 catcgaatc 306
|||||||||
Sbjct: 580 catcgaatc 588
Score = 212 bits (107), Expect = 6e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 atgatgaacagcgaaagcggattgattaagctctgcatcgatgcggcgtgtgacagcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atgatgaacagcgaaagcggattgattaagctctgcatcgatgcggcgtgtgacagcaaa 342
Query: 61 gaaagcatcgacagatggcgcctacagaaacgctctctcgatcgctt 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gaaagcatcgacagatggcgcctacagaaacgctctctcgatcgctt 389