Miyakogusa Predicted Gene

Lj4g3v2846170.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2846170.1 tr|F2EA56|F2EA56_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,55.26,7e-18,Auxin_inducible,Auxin responsive SAUR protein;
seg,NULL,CUFF.51761.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73534 similar to UniRef100_A7PKQ1 Cluster: Chromosome...   583   e-166
gnl|LJGI|GO031876 similar to UniRef100_O65168 Cluster: Auxin-ind...    82   2e-15

>gnl|LJGI|TC73534 similar to UniRef100_A7PKQ1 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (86%)
          Length = 472

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaggttaagaagggatggctagcagttcaagtgggtttggaggaagaagatcagtgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  atgaaggttaagaagggatggctagcagttcaagtgggtttggaggaagaagatcagtgt 101

                                                                       
Query: 61  tctcctcaaaggttggagattccaatttggtatctttatcattctcttttcaattgtctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tctcctcaaaggttggagattccaatttggtatctttatcattctcttttcaattgtctt 161

                                                                       
Query: 121 ttggacagagctcgtgaggtttatggctaccacaccgagggacccctcaagctgccatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ttggacagagctcgtgaggtttatggctaccacaccgagggacccctcaagctgccatgt 221

                                                                       
Query: 181 tcccttgatgactttcttcatctccgctggcaaattgagaaagagtcctccaattcccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tcccttgatgactttcttcatctccgctggcaaattgagaaagagtcctccaattcccat 281

                                                                 
Query: 241 cacaacaaccaccatcaattacttcctcacgccttgaatttccactcttgttga 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cacaacaaccaccatcaattacttcctcacgccttgaatttccactcttgttga 335


>gnl|LJGI|GO031876 similar to UniRef100_O65168 Cluster: Auxin-induced protein; n=1;
           Mesembryanthemum crystallinum|Rep: Auxin-induced protein
           - Mesembryanthemum crystallinum (Common ice plant),
           partial (89%)
          Length = 380

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 124 gacagagctcgtgaggtttatggctaccacaccgagggacccctcaagctgccatgttcc 183
           |||| |||||| |||||||| |||||||||||||| || || |||||||| || || |||
Sbjct: 267 gacaaagctcgcgaggtttacggctaccacaccgacggtcctctcaagctcccgtgctcc 326

                                                        
Query: 184 cttgatgactttcttcatctccgctggcaaattgagaaagagtcc 228
            | ||||| || ||||| ||||| |||| ||||||||||||||||
Sbjct: 327 gtcgatgatttccttcacctccggtggcgaattgagaaagagtcc 371