Miyakogusa Predicted Gene

Lj4g3v2789360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2789360.1 Non Chatacterized Hit- tr|G7L0B3|G7L0B3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,30.65,0.004,coiled-coil,NULL; seg,NULL,CUFF.51672.1
         (691 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW613603 homologue to UniRef100_A9GTA6 Cluster: Arabino...   628   e-179

>gnl|LJGI|BW613603 homologue to UniRef100_A9GTA6 Cluster: Arabinogalactan endo-1
           4-beta-galactosidase; n=1; Sorangium cellulosum 'So ce
           56'|Rep:, partial (3%)
          Length = 460

 Score =  628 bits (317), Expect = e-179
 Identities = 349/361 (96%), Gaps = 9/361 (2%)
 Strand = Plus / Plus

                                                                       
Query: 27  agcttactctgaaaaagctaagaaggctcaggtcagcagtcattcctcgattcctcattc 86
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 100 agcttactctgaaaaagctaagaaggctcaggtcagcagtccttcctcgattccccattc 159

                                                                       
Query: 87  caacgctaagagtggagattcctccacctcatcgaggacacttaagcgcaaagctcccga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 caacgctaagagtggagattcctccacctcatcgaggacacttaagcgcaaagctcccga 219

                                                                       
Query: 147 gttgtctgaccatgctcctccagcgcctgagccggctttaggggaggtaccttctatccc 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gttgtctgaccatgctcctccagcgcctgagccggctttaggggaggtaccttctatccc 279

                                                                       
Query: 207 acctcttacccaggacgtcgacgtctcagctcctgttgactccccggccatgacaaacct 266
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 280 acctcttacccaggacgtcgacgtctcagctccttttgactccccggccatgacaaacct 339

                                                                       
Query: 267 aatgttagccatccaagccgtgcagcaagaaaaaacgaaagatgcagccgccattcttga 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aatgttagccatccaagccgtgcagcaagaaaaaacgaaagatgcagccgccattcttga 399

                                                                       
Query: 327 cttaca---------agctaaggaaccaaaacgtagagcaaccttgaaaaagaagatagc 377
           ||||||         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cttacaagctaagctagctaaggaaccaaaacgtagagcaaccttgaaaaagaagatagc 459

            
Query: 378 t 378
           |
Sbjct: 460 t 460