Miyakogusa Predicted Gene

Lj4g3v2785700.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2785700.1 Non Chatacterized Hit- tr|I3T1G1|I3T1G1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
LSM,Ribonucleoprotein LSM domain; SMALL NUCLEAR RIBONUCLEOPROTEIN
SM,NULL; no description,,CUFF.51630.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62892 similar to UniRef100_A7QPB5 Cluster: Chromosome...   797   0.0  
gnl|LJGI|TC67066 homologue to UniRef100_A7QPB5 Cluster: Chromoso...   420   e-117

>gnl|LJGI|TC62892 similar to UniRef100_A7QPB5 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 895

 Score =  797 bits (402), Expect = 0.0
 Identities = 402/402 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcagaagcttgggaattccggtgaagctcctccacgagtcttcgggtcacatagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgagcagaagcttgggaattccggtgaagctcctccacgagtcttcgggtcacatagtg 191

                                                                       
Query: 61  tcggtggaactcaagagcggagaactctacagaggaagcatgatcgagtgcgaagacaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcggtggaactcaagagcggagaactctacagaggaagcatgatcgagtgcgaagacaac 251

                                                                       
Query: 121 tggaactgtcaactcgagagcatcacctacactgccaaggacgggaaaacatctcaactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tggaactgtcaactcgagagcatcacctacactgccaaggacgggaaaacatctcaactt 311

                                                                       
Query: 181 gagcacgtatttattcgaggcagcaaagtcaggtttatggtcataccagacatgctgaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gagcacgtatttattcgaggcagcaaagtcaggtttatggtcataccagacatgctgaag 371

                                                                       
Query: 241 aatgctcctatgtttaagcgtttggacgctagagtcaagggcaagggtgcatcacttggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aatgctcctatgtttaagcgtttggacgctagagtcaagggcaagggtgcatcacttggt 431

                                                                       
Query: 301 gttggtagaggcagagcagttgcaatgcgagcaaaggctcaagctgctggtcgtggtgga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gttggtagaggcagagcagttgcaatgcgagcaaaggctcaagctgctggtcgtggtgga 491

                                                     
Query: 361 gctccacctggaagaggtgcaccaccaatgcggagatgatca 402
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gctccacctggaagaggtgcaccaccaatgcggagatgatca 533


>gnl|LJGI|TC67066 homologue to UniRef100_A7QPB5 Cluster: Chromosome chr18
           scaffold_137, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_137, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (95%)
          Length = 684

 Score =  420 bits (212), Expect = e-117
 Identities = 355/402 (88%), Gaps = 3/402 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcagaagcttgggaattccggtgaagctcctccacgagtcttcgggtcacatagtg 60
           |||||||| |||||||| |||||||||||||| ||||||||  | ||||||||| | || 
Sbjct: 112 atgagcaggagcttggggattccggtgaagcttctccacgaagcgtcgggtcacgtggtc 171

                                                                       
Query: 61  tcggtggaactcaagagcggagaactctacagaggaagcatgatcgagtgcgaagacaac 120
            ||||||| ||||||||||||||||||||| |||| | ||||||||||||||| ||||| 
Sbjct: 172 acggtggagctcaagagcggagaactctaccgaggcaacatgatcgagtgcgaggacaat 231

                                                                       
Query: 121 tggaactgtcaactcgagagcatcacctacactgccaaggacgggaaaacatctcaactt 180
           ||||||||||||||||| ||||||||||||||||| ||||| || |||||||| || |||
Sbjct: 232 tggaactgtcaactcgaaagcatcacctacactgcaaaggatggaaaaacatcacagctt 291

                                                                       
Query: 181 gagcacgtatttattcgaggcagcaaagtcaggtttatggtcataccagacatgctgaag 240
           ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 292 gagcatgtgtttattcgaggcagcaaagtcaggtttatggtcataccagacatgttgaag 351

                                                                       
Query: 241 aatgctcctatgtttaagcgtttggacgctagagtcaagggcaagggtgcatcacttggt 300
           ||||||||||||||||||||| | || || | | |||||||||| |||||||| ||||||
Sbjct: 352 aatgctcctatgtttaagcgtcttgatgcaaaaatcaagggcaaaggtgcatctcttggt 411

                                                                       
Query: 301 gttggtagaggcagagcagttgcaatgcgagcaaaggctcaagctgctggtcgtggtgga 360
           |||||||| || |||||||||||||||||||| ||||||||| | ||||| |   |||||
Sbjct: 412 gttggtaggggaagagcagttgcaatgcgagctaaggctcaatcggctggcc---gtgga 468

                                                     
Query: 361 gctccacctggaagaggtgcaccaccaatgcggagatgatca 402
           ||| |||| ||||| |||||||||||| ||||||| ||||||
Sbjct: 469 gctgcaccaggaaggggtgcaccaccagtgcggaggtgatca 510