Miyakogusa Predicted Gene

Lj4g3v2603730.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2603730.1 tr|G7LHV2|G7LHV2_MEDTR Actin-related protein 2/3
complex subunit OS=Medicago truncatula GN=MTR_8g085,97.65,0,Arp2/3
complex subunits,NULL; ARPC4,ARP23 complex 20kDa subunit; no
description,NULL; ARP2/3 COMPLEX,CUFF.51209.1
         (513 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80156 homologue to UniRef100_Q6X0P2 Cluster: ARPC p20...   609   e-174

>gnl|LJGI|TC80156 homologue to UniRef100_Q6X0P2 Cluster: ARPC p20; n=1; Glycine
           max|Rep: ARPC p20 - Glycine max (Soybean), partial (86%)
          Length = 497

 Score =  609 bits (307), Expect = e-174
 Identities = 334/339 (98%), Gaps = 3/339 (0%)
 Strand = Plus / Plus

                                                                       
Query: 178 gaaaagtgcttaatagaaacatctatcaattcattgaggataagtctcaaggtgaagcag 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaaaagtgcttaatagaaacatctatcaattcattgaggataagtctcaaggtgaagcag 60

                                                                       
Query: 238 gctgatgaacttgaaaacatactgaccaagaaatttctgagatttttgtccatgagagct 297
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61  gctgatgaacttgaaaacatactgaccaagaaatttttgagatttttgtccatgagagct 120

                                                                       
Query: 298 gaggctttccaagtattgaggagaaagcctgtgcagggatatgatattagcttccttata 357
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggctttccacgtattgaggagaaagcctgtgcagggatatgatattagcttccttata 180

                                                                       
Query: 358 acaaattaccactgtgaggacatgcagaagcagaaactcataga-ttttattgtgcaa-t 415
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 181 acaaattaccactgtgaggacatgcagaagcagaaactcatagatttttattgtgcaatt 240

                                                                       
Query: 416 ttatggaggaca-ttgataaggagattagcgagctcaaaatgtcggtgaacacacggggg 474
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatggaggacatttgataaggagattagcgagctcaaaatgtcggtgaacacacggggg 300

                                                  
Query: 475 aggctggtggctacagagtttctgaagcagtttatctga 513
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctggtggctacagagtttctgaagcagtttatctga 339