Miyakogusa Predicted Gene
- Lj4g3v2371680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2371680.1 tr|F2E5J9|F2E5J9_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,64.71,4e-18,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL; A_tha_TIGR01569: plan,CUFF.50845.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58213 weakly similar to UniRef100_A7NW79 Cluster: Chr... 1142 0.0
gnl|LJGI|TC79747 weakly similar to UniRef100_A7NW79 Cluster: Chr... 1082 0.0
>gnl|LJGI|TC58213 weakly similar to UniRef100_A7NW79 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (83%)
Length = 897
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atggcttctagggacaagacagaggaccctgagcacagattatcttcaactccaattcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atggcttctagggacaagacagaggaccctgagcacagattatcttcaactccaattcca 150
Query: 61 gctcctgctgctggtgttgattactttcactttgatttgatcctaaggtttctcttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gctcctgctgctggtgttgattactttcactttgatttgatcctaaggtttctcttgttt 210
Query: 121 gcatcatcactggttgcagttgtggtcatggttactagtaaccaaactgaatatgtacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gcatcatcactggttgcagttgtggtcatggttactagtaaccaaactgaatatgtacct 270
Query: 181 ttgcctaggccagccaagttcagatactcaccagcttttatatattttgtggctgcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttgcctaggccagccaagttcagatactcaccagcttttatatattttgtggctgcattc 330
Query: 241 tccgtttctggactctatagtatcctcacagctcttgcatcactctctgtcatccgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tccgtttctggactctatagtatcctcacagctcttgcatcactctctgtcatccgaaaa 390
Query: 301 cctgcccttaaaaccaagttcctcctctattttctgttctgggatgcgctgatattgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cctgcccttaaaaccaagttcctcctctattttctgttctgggatgcgctgatattgggg 450
Query: 361 atattagcttcagcaacaggcacagctgggggtgtggcatatgtgggcttgaagggaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atattagcttcagcaacaggcacagctgggggtgtggcatatgtgggcttgaagggaaac 510
Query: 421 aaccatgtgggttggcataaaatttgcaacgtctatgataagtactgtaggcatgttggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaccatgtgggttggcataaaatttgcaacgtctatgataagtactgtaggcatgttggt 570
Query: 481 ggctccattggagtgggtttggttggaagcattgtgtcggtcttgctcgtctggctttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggctccattggagtgggtttggttggaagcattgtgtcggtcttgctcgtctggctttct 630
Query: 541 gctttcagtcttcatagtcgagttccccaataggtg 576
||||||||||||||||||||||||||||||||||||
Sbjct: 631 gctttcagtcttcatagtcgagttccccaataggtg 666
>gnl|LJGI|TC79747 weakly similar to UniRef100_A7NW79 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (82%)
Length = 765
Score = 1082 bits (546), Expect = 0.0
Identities = 557/560 (99%), Gaps = 3/560 (0%)
Strand = Plus / Plus
Query: 1 atggcttctagggacaagacagaggaccctgagcacagattatcttcaactccaattcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atggcttctagggacaagacagaggaccctgagcacagattatcttcaactccaattcca 268
Query: 61 gctcctgctgctggtgttgattactttcactttgatttgatcctaaggtttctcttgttt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gctcctgc---tggtgttgattactttcactttgatttgatcctaaggtttctcttgttt 325
Query: 121 gcatcatcactggttgcagttgtggtcatggttactagtaaccaaactgaatatgtacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcatcatcactggttgcagttgtggtcatggttactagtaaccaaactgaatatgtacct 385
Query: 181 ttgcctaggccagccaagttcagatactcaccagcttttatatattttgtggctgcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttgcctaggccagccaagttcagatactcaccagcttttatatattttgtggctgcattc 445
Query: 241 tccgtttctggactctatagtatcctcacagctcttgcatcactctctgtcatccgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tccgtttctggactctatagtatcctcacagctcttgcatcactctctgtcatccgaaaa 505
Query: 301 cctgcccttaaaaccaagttcctcctctattttctgttctgggatgcgctgatattgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cctgcccttaaaaccaagttcctcctctattttctgttctgggatgcgctgatattgggg 565
Query: 361 atattagcttcagcaacaggcacagctgggggtgtggcatatgtgggcttgaagggaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atattagcttcagcaacaggcacagctgggggtgtggcatatgtgggcttgaagggaaac 625
Query: 421 aaccatgtgggttggcataaaatttgcaacgtctatgataagtactgtaggcatgttggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaccatgtgggttggcataaaatttgcaacgtctatgataagtactgtaggcatgttggt 685
Query: 481 ggctccattggagtgggtttggttggaagcattgtgtcggtcttgctcgtctggctttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ggctccattggagtgggtttggttggaagcattgtgtcggtcttgctcgtctggctttct 745
Query: 541 gctttcagtcttcatagtcg 560
||||||||||||||||||||
Sbjct: 746 gctttcagtcttcatagtcg 765